HG10020396 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTTGTTGCTTTGCAATCCTGAATTGCTGTAAAGGAAATAGCAGCCTCGAGGAACCGGCAGAAGGTGAGAATCAGGTAACTTTGTTTTTCTTTTGTAGATTCTAGGTTAATTTTATATATTCTATAGATTTTTTTCAAATGGGCTTCTCTAAATTTTGATAATTTAGGCTTCTTTAGATAAGTAATTACTATCGACTCGTTGAATTTTCAAATTGAAATGATTTTCTACCTTGCACTTGATTAGGGATTGCTGTTACCAACAATGTACGTATCTTTTCTTATAATTCACTGAGGTCAGCAACTAGGAATTTTCATCCATCAACCAGAATAGGTGCTGGAGGTTATGGAGTTGTCTACAAAGTGAGACAATGATAATCTTATTTTTATGGTTCTCTTCTGTAATTTGGTCCCTGAAGGTACCTTTCCCATATTGATTCTGATGCATTTAATCTATCATTGATTTGCGACGGCAGGGAGTTTTAAGGGATGGTACCAATGTTGCAGTCAAATCACTGTCTGCAGAATCAGCTCAGGGAACTCGTGAATTCTTAACCGAGATAAATATGATATCAAATATAAGACATCAAAATCTCGTTGAACTGATTGGTTGTTGTGTCGAAGGCACACATCGAATTTTGGTGTATGAATACCTGGAAAACAACAGCCTTGCGAGTACTTTGCTTGGTAGGTTTCTAGAGCATTCAAGTTGATTTTATATATTTGAAGTCTGTATAAATTTGGATCATGTTATATCTCTGTAAGTTCTTGCTCTAGTTCGACATTTTGTTTCAAATCTAAAGTTCCAGTATGGTTAACATGTGTTTCTTATTGTCAGTAGAATCTTCTGGCATGTTCCATCCTTAATTTGCCCCGTAAACAAAGACTTGCTGTTAGTTGATGAAATTTTCATCAGTATAAGATTATTATAGGTATCGTTTATTTGATAAATTTCTCTAGTAAGAATTTCAGCCTATCAACTAATGACTAGTTCGAGAGGCTCCTTGGTCTCTCTGCATCAGACAACTTCAACTGAGATTTTAAACAAGAAAAACCAGACTTTGACGTATATGAAAGACCAAATACAGCCAACTAGGAAATTAACTATCATGGGTTGGCCTAGTGGTAAAAAAGGAGACAAAGTCTCAATAATTGGCTAAGAGGTCATGGGTTCAATCCATGGTGGCCACCTACATAGGAATTAATTTCCTACGAGTTTCCTTGACACCCAAATGTTGTAGGGTCAGGCGGGTTGTCACGTGAGATTAGTCGAGGTGCGTGTAAGCTGGCCCGGACACTCACATTTCCCTTCGTTCCCTTCCTTGAATACACTTTCACAGTTTGTGTTCTAACAGATTATTATCACAAGCGACTATCATTTCAGGTACAATGAGTAAGCATGTCATTCTGGATTGGCCAAAGAGAGCTAAGATTTGTCTTGGTACAGCTTTGGGTCTTGCATTCCTACACGAGGAAGCTGAATATTCTGTTGTTCATAGAGATATCAAGGCTAGCAATATACTTCTTGACAGAAACTTTGATCCTAAAATAGGAGACTTTGGGTTGGCTAAACTTTTCCCAGACAACGTTACTCATGTTAGCACTCGAGTGGCCGGAACTGTGTAAGCACTGTTTTTCATTATCTAGTGATATTTGTGAACTTTACTTCTAAAGTATGCTGAGAACACATCGTCATTATTTTAGGCAGAGCAACAAAATTTATCTTGTTTACTAATTAACTTGCTGCATCGTATTTGTTGTAATCTGCATTCATAAATAGATAAAATAAAAAAGGGAACTTTAACAGTTGATCATCATTATCTTTATGGCTTATGCAATCTATTCAAGAACCAAGAATACCAATATCTTGATTGAACTAATGAGTTTAGCAAGGTTAAAAGTCACACGGCAATTAGCTTATCTGATGGCTGACTACAATATCAAGAGAGGTCATAAGATCTGGTTGCCGATCTCATTTTAGTTTGCTGTCATTGGTTTTGCTTCTTCAGTCATTCACACACCCTCAAAATGAGACACAACACTAATTTCATGACCTTTTTTTTGCATGATATTCTGTTCCTCTTTAAATATTTTCCCACCATTTCGTGTACCTACAGTGGATATTTGGCCCCTGAGTATGCACTTTTAGGACAGTTGACAAAGAAGGCAGATGTATACAGTTTTGGTGTGCTCATGCTGGAAGTAGTTAGTGGAAGTAGCAGCAGTAAAACAGCATTTGGAGAAGAGTTGTCAATTCTCGTGGAATGGGTACATTTCCATTTTCTTTTAACAAGAACTTACTGCTCATTCATTTATGGAGTTGAAAGTGACTTTGCTTTTACGAGTACTACTATTAAATAGTCACCAATGCTTGAATCAATAGATATAAATTCAATATCAACGGTATGTGTGATTTTAACCTGGTGAATAAAAGTCATAGGCAGGTTAAATGAAGATCACTCATTATGTACTTGTTAGAACTCCTTTTTTGGCATCCTCAATCAAACTCCATTGCATGTATAATCATTTTCCATACAGTACACTTCAATTTGATAAATTTGATTTGTGCCACTTGTAGACTTGGAAATTAAAACAAGAAGGACGGCTTGTAGAACTAATCGATCCAGAACTGGTCGATTATCCGAAGGCTGAGGTGATGCGTTTCATCACAGTTGCACTCTTCTGTACCCAAGCAGCTGCAAATCAAAGGCCAACCATGAAGCAGGTTGTGGAAATGCTTTCAAGAGAGGTACACCTTAACGAAAAACTATTGACAGAACCAGGAGTATACAAAGGACACAACACTAGGAAGCTAAATGGTGCTGGTACAAGTTCTGAGGGGACTTCATTCTCCCATGGAGACAGAGGTAAAAAAGCTATAAAGTCTACTACATCTTCACCCCAATTTAATAGCTCAAATAGTGTGACTCAAATGCTTCCTAGGTGATAATACTTAACCACCGCTTCTATTCCCCTTGTAATATTTGATATTTTAGTTCCAATCCCTAAATCTGTTCTCCAAACTTGCTCTATTCCCCTTGTAGTATTTATATTTTAGATACAATCCTCAAATTTATTGTCAAAACTTGCTCTATTCCTTTTTTTCCCCAGAAAGGTGTAAAGTGGGGAGAACATCATCCCATGTTTCAGTGGAGGATCTAGCTGTGAAGAGTGAGAAATGTAGCACTGTGCTATGTTCGAAATGA ATGGCTTCTTGTTGCTTTGCAATCCTGAATTGCTGTAAAGGAAATAGCAGCCTCGAGGAACCGGCAGAAGGGATTGCTGTTACCAACAATGTACGTATCTTTTCTTATAATTCACTGAGGTCAGCAACTAGGAATTTTCATCCATCAACCAGAATAGGTGCTGGAGGTTATGGAGTTGTCTACAAAGGAGTTTTAAGGGATGGTACCAATGTTGCAGTCAAATCACTGTCTGCAGAATCAGCTCAGGGAACTCGTGAATTCTTAACCGAGATAAATATGATATCAAATATAAGACATCAAAATCTCGTTGAACTGATTGGTTGTTGTGTCGAAGGCACACATCGAATTTTGGTGTATGAATACCTGGAAAACAACAGCCTTGCGAGTACTTTGCTTGGGTCAGGCGGGTTGTCACGTGAGATTAGTCGAGGTGCGTGTAAGCTGGCCCGGACACTCACATTTCCCTTCGTTCCCTTCCTTGAATACACTTTCACAGTTTGTGTTCTAACAGATTATTATCACAAGCGACTATCATTTCAGACTTGGAAATTAAAACAAGAAGGACGGCTTGTAGAACTAATCGATCCAGAACTGGTCGATTATCCGAAGGCTGAGGTGATGCGTTTCATCACAGTTGCACTCTTCTGTACCCAAGCAGCTGCAAATCAAAGGCCAACCATGAAGCAGGTTGTGGAAATGCTTTCAAGAGAGGTACACCTTAACGAAAAACTATTGACAGAACCAGGAGTATACAAAGGACACAACACTAGGAAGCTAAATGGTGCTGGTACAAGTTCTGAGGGGACTTCATTCTCCCATGGAGACAGAGAAAGGTGTAAAGTGGGGAGAACATCATCCCATGTTTCAGTGGAGGATCTAGCTGTGAAGAGTGAGAAATGTAGCACTGTGCTATGTTCGAAATGA ATGGCTTCTTGTTGCTTTGCAATCCTGAATTGCTGTAAAGGAAATAGCAGCCTCGAGGAACCGGCAGAAGGGATTGCTGTTACCAACAATGTACGTATCTTTTCTTATAATTCACTGAGGTCAGCAACTAGGAATTTTCATCCATCAACCAGAATAGGTGCTGGAGGTTATGGAGTTGTCTACAAAGGAGTTTTAAGGGATGGTACCAATGTTGCAGTCAAATCACTGTCTGCAGAATCAGCTCAGGGAACTCGTGAATTCTTAACCGAGATAAATATGATATCAAATATAAGACATCAAAATCTCGTTGAACTGATTGGTTGTTGTGTCGAAGGCACACATCGAATTTTGGTGTATGAATACCTGGAAAACAACAGCCTTGCGAGTACTTTGCTTGGGTCAGGCGGGTTGTCACGTGAGATTAGTCGAGGTGCGTGTAAGCTGGCCCGGACACTCACATTTCCCTTCGTTCCCTTCCTTGAATACACTTTCACAGTTTGTGTTCTAACAGATTATTATCACAAGCGACTATCATTTCAGACTTGGAAATTAAAACAAGAAGGACGGCTTGTAGAACTAATCGATCCAGAACTGGTCGATTATCCGAAGGCTGAGGTGATGCGTTTCATCACAGTTGCACTCTTCTGTACCCAAGCAGCTGCAAATCAAAGGCCAACCATGAAGCAGGTTGTGGAAATGCTTTCAAGAGAGGTACACCTTAACGAAAAACTATTGACAGAACCAGGAGTATACAAAGGACACAACACTAGGAAGCTAAATGGTGCTGGTACAAGTTCTGAGGGGACTTCATTCTCCCATGGAGACAGAGAAAGGTGTAAAGTGGGGAGAACATCATCCCATGTTTCAGTGGAGGATCTAGCTGTGAAGAGTGAGAAATGTAGCACTGTGCTATGTTCGAAATGA MASCCFAILNCCKGNSSLEEPAEGIAVTNNVRIFSYNSLRSATRNFHPSTRIGAGGYGVVYKGVLRDGTNVAVKSLSAESAQGTREFLTEINMISNIRHQNLVELIGCCVEGTHRILVYEYLENNSLASTLLGSGGLSREISRGACKLARTLTFPFVPFLEYTFTVCVLTDYYHKRLSFQTWKLKQEGRLVELIDPELVDYPKAEVMRFITVALFCTQAAANQRPTMKQVVEMLSREVHLNEKLLTEPGVYKGHNTRKLNGAGTSSEGTSFSHGDRERCKVGRTSSHVSVEDLAVKSEKCSTVLCSK Homology
BLAST of HG10020396 vs. NCBI nr
Match: XP_038904868.1 (putative serine/threonine-protein kinase [Benincasa hispida]) HSP 1 Score: 398.3 bits (1022), Expect = 6.1e-107 Identity = 228/358 (63.69%), Postives = 251/358 (70.11%), Query Frame = 0
BLAST of HG10020396 vs. NCBI nr
Match: XP_004137905.1 (putative serine/threonine-protein kinase [Cucumis sativus] >KGN58767.1 hypothetical protein Csa_002377 [Cucumis sativus]) HSP 1 Score: 390.2 bits (1001), Expect = 1.7e-104 Identity = 226/358 (63.13%), Postives = 247/358 (68.99%), Query Frame = 0
BLAST of HG10020396 vs. NCBI nr
Match: KAA0044163.1 (putative serine/threonine-protein kinase isoform X2 [Cucumis melo var. makuwa] >TYK24970.1 putative serine/threonine-protein kinase isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 387.1 bits (993), Expect = 1.4e-103 Identity = 226/368 (61.41%), Postives = 251/368 (68.21%), Query Frame = 0
BLAST of HG10020396 vs. NCBI nr
Match: XP_008442433.1 (PREDICTED: putative serine/threonine-protein kinase isoform X2 [Cucumis melo]) HSP 1 Score: 387.1 bits (993), Expect = 1.4e-103 Identity = 226/368 (61.41%), Postives = 251/368 (68.21%), Query Frame = 0
BLAST of HG10020396 vs. NCBI nr
Match: XP_008442432.1 (PREDICTED: putative serine/threonine-protein kinase isoform X1 [Cucumis melo]) HSP 1 Score: 385.6 bits (989), Expect = 4.1e-103 Identity = 228/373 (61.13%), Postives = 247/373 (66.22%), Query Frame = 0
BLAST of HG10020396 vs. ExPASy Swiss-Prot
Match: Q93YN1 (Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 2.9e-35 Identity = 107/337 (31.75%), Postives = 156/337 (46.29%), Query Frame = 0
BLAST of HG10020396 vs. ExPASy Swiss-Prot
Match: C0LGE0 (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana OX=3702 GN=At1g07650 PE=1 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 2.4e-29 Identity = 98/299 (32.78%), Postives = 136/299 (45.48%), Query Frame = 0
BLAST of HG10020396 vs. ExPASy Swiss-Prot
Match: C0LGG8 (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana OX=3702 GN=At1g53430 PE=1 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 4.0e-29 Identity = 63/121 (52.07%), Postives = 81/121 (66.94%), Query Frame = 0
BLAST of HG10020396 vs. ExPASy Swiss-Prot
Match: C0LGG9 (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana OX=3702 GN=At1g53440 PE=2 SV=2) HSP 1 Score: 130.2 bits (326), Expect = 4.0e-29 Identity = 63/121 (52.07%), Postives = 81/121 (66.94%), Query Frame = 0
BLAST of HG10020396 vs. ExPASy Swiss-Prot
Match: C0LGN2 (Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 OS=Arabidopsis thaliana OX=3702 GN=LRR-RLK PE=1 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 4.5e-28 Identity = 63/123 (51.22%), Postives = 84/123 (68.29%), Query Frame = 0
BLAST of HG10020396 vs. ExPASy TrEMBL
Match: A0A0A0LDF5 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G731780 PE=3 SV=1) HSP 1 Score: 390.2 bits (1001), Expect = 8.0e-105 Identity = 226/358 (63.13%), Postives = 247/358 (68.99%), Query Frame = 0
BLAST of HG10020396 vs. ExPASy TrEMBL
Match: A0A5D3DNW1 (Putative serine/threonine-protein kinase isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00870 PE=3 SV=1) HSP 1 Score: 387.1 bits (993), Expect = 6.8e-104 Identity = 226/368 (61.41%), Postives = 251/368 (68.21%), Query Frame = 0
BLAST of HG10020396 vs. ExPASy TrEMBL
Match: A0A1S3B6F8 (putative serine/threonine-protein kinase isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486304 PE=3 SV=1) HSP 1 Score: 387.1 bits (993), Expect = 6.8e-104 Identity = 226/368 (61.41%), Postives = 251/368 (68.21%), Query Frame = 0
BLAST of HG10020396 vs. ExPASy TrEMBL
Match: A0A1S3B6B8 (putative serine/threonine-protein kinase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486304 PE=3 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 2.0e-103 Identity = 228/373 (61.13%), Postives = 247/373 (66.22%), Query Frame = 0
BLAST of HG10020396 vs. ExPASy TrEMBL
Match: A0A6J1CWR1 (putative serine/threonine-protein kinase isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015002 PE=3 SV=1) HSP 1 Score: 380.2 bits (975), Expect = 8.3e-102 Identity = 223/375 (59.47%), Postives = 250/375 (66.67%), Query Frame = 0
BLAST of HG10020396 vs. TAIR 10
Match: AT3G09010.1 (Protein kinase superfamily protein ) HSP 1 Score: 254.2 bits (648), Expect = 1.3e-67 Identity = 169/384 (44.01%), Postives = 215/384 (55.99%), Query Frame = 0
BLAST of HG10020396 vs. TAIR 10
Match: AT1G16670.1 (Protein kinase superfamily protein ) HSP 1 Score: 150.6 bits (379), Expect = 2.1e-36 Identity = 107/337 (31.75%), Postives = 156/337 (46.29%), Query Frame = 0
BLAST of HG10020396 vs. TAIR 10
Match: AT1G56145.1 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 132.9 bits (333), Expect = 4.4e-31 Identity = 98/289 (33.91%), Postives = 128/289 (44.29%), Query Frame = 0
BLAST of HG10020396 vs. TAIR 10
Match: AT1G07650.1 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 131.0 bits (328), Expect = 1.7e-30 Identity = 98/299 (32.78%), Postives = 136/299 (45.48%), Query Frame = 0
BLAST of HG10020396 vs. TAIR 10
Match: AT1G07650.2 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 131.0 bits (328), Expect = 1.7e-30 Identity = 98/299 (32.78%), Postives = 136/299 (45.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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