HG10020366 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020366
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Tubulin beta chain
Location	Chr04: 31223279 .. 31224797 (-)
RNA-Seq Expression	HG10020366
Synteny	HG10020366

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTGAGATTCTTCACATCCAAGGTGGCCAATGTGGCAACCAGATCGGTGCCAAGTTCTGGGAAGTGGTTTGTGCAGAGCACGGCATCGATCCCATCGGTAAGTACACTGGTGATTCCGATCTTCAACTTGACCGGATTAATGTATACTACAATGAAGCCAGTTGCGGCCGATTTGTTCCTCGTGCTGTGCTTATGGATCTTGAGCCTGGTGTTATGGATAGTATCAGATCTGGACCTTACGGTCAGGTTTTCAGACCTGATAACTTCGTTTTTGGTCAGTCTGGTGCTGGAAACAACTGGGCTAAAGGACATTACACCGAAGGTGCCGAGCTTATTGATTCTGTTCTTGATGTTGTTCGTAAGGAGGCTGAGAACTGTGACTGCCTGCAAGGTACTTTTGGTTAATCGACTCTTCTGATTTTTCCCCTTTCTGTGTTCTTTTATTTGTATGGTTGCTCAAGATGGTTTGGATCCGATTTTTAGGGTTTCAGGTGTGCCATTCTTTGGGAGGAGGGACCGGATCTGGAATGGGAACTCTTCTGATTTCCAAGATCAGAGAAGAATACCCTGATAGAATGATGCTTACGTTCTCCGTTTTCCCATCTCCTAAAGTTTCTGATACTGTTGTTGAGCCTTACAACGCAACCCTCTCTGTTCATCAACTTGTTGAAAACGCCGACGAGTGTATGGTACTTGATAACGAGGCTCTCTACGATATTTGCTTCCGTACCTTGAAGCTGTCCACTCCAAGCTGTATGTTTCTGGAACAGATCTTAGATCTTACGTTTATCTTTATTCTGTTGGAACATTCTCTAATAGTTTCTTGTGTTCTTGTGCAGTCGGTGATCTTAACCATCTGATTTCTGCAACAATGTCTGGTGTGACCTGCTGCTTGCGATTCCCTGGACAGCTCAACTCAGATCTTAGGAAGCTTGCCGTCAATCTTATCCCATTTCCTCGTCTCCACTTCTTCATGGTGGGTTTTGCTCCACTCACTTCCCGTGGATCCCAGCAATACAGAGCTCTTACAGTACCTGAGCTCACTCAGCAAATGTGGGATGCTAAGAACATGATGTGTGCTGCTGATCCCCGACATGGTCGCTATCTTACTGCCTCTGCTATGTTTAGGGGTAAGATGAGCACCAAGGAAGTTGATGAACAAATGATCAATGTTCAGAACAAGAATTCTTCATACTTCGTTGAATGGATCCCCAATAATGTGAAATCTACAGTCTGTGATATCCCTCCAACTGGGTTGAAAATGGCCTCAACTTTCCTTGGGAATTCAACATCGATCCAAGAGATGTTTCGCCGTGTTAGTGAGCAGTTTACGGCTATGTTTAGGAGGAAGGCTTTCTTGCATTGGTACACTGGGGAGGGTATGGATGAGATGGAGTTTACTGAGGCTGAAAGCAATATGAATGATCTGGTTTCTGAGTATCAGCAATACCAAGATGCTACGGCTGAAGATGAAGAATACTACGAAGATGAAGATGGTGTGGAACATGACGAATAA

mRNA sequence

ATGCGTGAGATTCTTCACATCCAAGGTGGCCAATGTGGCAACCAGATCGGTGCCAAGTTCTGGGAAGTGGTTTGTGCAGAGCACGGCATCGATCCCATCGGTAAGTACACTGGTGATTCCGATCTTCAACTTGACCGGATTAATGTATACTACAATGAAGCCAGTTGCGGCCGATTTGTTCCTCGTGCTGTGCTTATGGATCTTGAGCCTGGTGTTATGGATAGTATCAGATCTGGACCTTACGGTCAGGTTTTCAGACCTGATAACTTCGTTTTTGGTCAGTCTGGTGCTGGAAACAACTGGGCTAAAGGACATTACACCGAAGGTGCCGAGCTTATTGATTCTGTTCTTGATGTTGTTCGTAAGGAGGCTGAGAACTGTGACTGCCTGCAAGGGTTTCAGGTGTGCCATTCTTTGGGAGGAGGGACCGGATCTGGAATGGGAACTCTTCTGATTTCCAAGATCAGAGAAGAATACCCTGATAGAATGATGCTTACGTTCTCCGTTTTCCCATCTCCTAAAGTTTCTGATACTGTTGTTGAGCCTTACAACGCAACCCTCTCTGTTCATCAACTTGTTGAAAACGCCGACGAGTGTATGGTACTTGATAACGAGGCTCTCTACGATATTTGCTTCCGTACCTTGAAGCTGTCCACTCCAAGCTTCTGTGATATCCCTCCAACTGGGTTGAAAATGGCCTCAACTTTCCTTGGGAATTCAACATCGATCCAAGAGATGTTTCGCCGTGTTAGTGAGCAGTTTACGGCTATGTTTAGGAGGAAGGCTTTCTTGCATTGGTACACTGGGGAGGGTATGGATGAGATGGAGTTTACTGAGGCTGAAAGCAATATGAATGATCTGGTTTCTGAGTATCAGCAATACCAAGATGCTACGGCTGAAGATGAAGAATACTACGAAGATGAAGATGGTGTGGAACATGACGAATAA

Coding sequence (CDS)

ATGCGTGAGATTCTTCACATCCAAGGTGGCCAATGTGGCAACCAGATCGGTGCCAAGTTCTGGGAAGTGGTTTGTGCAGAGCACGGCATCGATCCCATCGGTAAGTACACTGGTGATTCCGATCTTCAACTTGACCGGATTAATGTATACTACAATGAAGCCAGTTGCGGCCGATTTGTTCCTCGTGCTGTGCTTATGGATCTTGAGCCTGGTGTTATGGATAGTATCAGATCTGGACCTTACGGTCAGGTTTTCAGACCTGATAACTTCGTTTTTGGTCAGTCTGGTGCTGGAAACAACTGGGCTAAAGGACATTACACCGAAGGTGCCGAGCTTATTGATTCTGTTCTTGATGTTGTTCGTAAGGAGGCTGAGAACTGTGACTGCCTGCAAGGGTTTCAGGTGTGCCATTCTTTGGGAGGAGGGACCGGATCTGGAATGGGAACTCTTCTGATTTCCAAGATCAGAGAAGAATACCCTGATAGAATGATGCTTACGTTCTCCGTTTTCCCATCTCCTAAAGTTTCTGATACTGTTGTTGAGCCTTACAACGCAACCCTCTCTGTTCATCAACTTGTTGAAAACGCCGACGAGTGTATGGTACTTGATAACGAGGCTCTCTACGATATTTGCTTCCGTACCTTGAAGCTGTCCACTCCAAGCTTCTGTGATATCCCTCCAACTGGGTTGAAAATGGCCTCAACTTTCCTTGGGAATTCAACATCGATCCAAGAGATGTTTCGCCGTGTTAGTGAGCAGTTTACGGCTATGTTTAGGAGGAAGGCTTTCTTGCATTGGTACACTGGGGAGGGTATGGATGAGATGGAGTTTACTGAGGCTGAAAGCAATATGAATGATCTGGTTTCTGAGTATCAGCAATACCAAGATGCTACGGCTGAAGATGAAGAATACTACGAAGATGAAGATGGTGTGGAACATGACGAATAA

Protein sequence

MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPIGKYTGDSDLQLDRINVYYNEASCGRFVPRAVLMDLEPGVMDSIRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFCDIPPTGLKMASTFLGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEDEEYYEDEDGVEHDE

Homology

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BLAST of HG10020366 vs. NCBI nr
Match: OVA14069.1 (Tubulin [Macleaya cordata])

HSP 1 Score: 615.1 bits (1585), Expect = 3.2e-172
Identity = 294/314 (93.63%), Postives = 306/314 (97.45%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPIGKYTGDSDLQLDRINVYYNEASCGRFV 60
           MREILHIQGGQCGNQIGAKFWEVVCAEHGID  G+Y GDS+LQL+R+NVYYNEASCGRFV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYQGDSELQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGVMDSIRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPG MDS+RSGPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFCDIPPTGLKMASTFLGNS 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSFCDIPPTGLKMASTF+GNS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFCDIPPTGLKMASTFIGNS 240

Query: 241 TSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAE 300
           TSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA+
Sbjct: 241 TSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAD 300

Query: 301 DEEYYEDEDGVEHD 315
           DE  YEDE+ ++ D
Sbjct: 301 DEGEYEDEEELQED 314

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BLAST of HG10020366 vs. NCBI nr
Match: KAE8055308.1 (hypothetical protein FH972_012157 [Carpinus fangiana])

HSP 1 Score: 598.2 bits (1541), Expect = 4.1e-167
Identity = 291/334 (87.13%), Postives = 303/334 (90.72%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPIGKYTGDSDLQLDRINVYYNEASCGRFV 60
           MREILHIQGGQCGNQIGAKFWEVVCAEHGID  G+Y GD++LQL+R+NVYYNEASCGRFV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGDTELQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGVMDSIRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPG MDS+RSGPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSF------------------ 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPS+                  
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSYSFFFISVRRNSCYITWWI 240

Query: 241 --------CDIPPTGLKMASTFLGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDE 300
                   CDIPPTGLKMASTF+GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDE
Sbjct: 241 PNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDE 300

Query: 301 MEFTEAESNMNDLVSEYQQYQDATAEDEEYYEDE 309
           MEFTEAESNMNDLVSEYQQYQDATAE+EE YE+E
Sbjct: 301 MEFTEAESNMNDLVSEYQQYQDATAEEEEEYEEE 334

[Close]

BLAST of HG10020366 vs. NCBI nr
Match: KAF9867281.1 (hypothetical protein H0E87_026127 [Populus deltoides])

HSP 1 Score: 598.2 bits (1541), Expect = 4.1e-167
Identity = 292/329 (88.75%), Postives = 303/329 (92.10%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPIGKYTGDSDLQLDRINVYYNEASCGRFV 60
           MREILH+QGGQCGNQIG+KFWEVVCAEHGIDP GKYTG SDLQL+R+NVYYNEASCGRFV
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVVCAEHGIDPTGKYTGSSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGVMDSIRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPG MDS+R+GPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTP--------------SFCDIP 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TP              S CDIP
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSCKCILWIPNNVKSSVCDIP 240

Query: 241 PTGLKMASTFLGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 300
           P GL MASTF+GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND
Sbjct: 241 PIGLAMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 300

Query: 301 LVSEYQQYQDATAEDEEYYEDEDGVEHDE 316
           LVSEYQQYQDATAED+  YEDE+  E  E
Sbjct: 301 LVSEYQQYQDATAEDDIDYEDEEEEEAAE 329

[Close]

BLAST of HG10020366 vs. NCBI nr
Match: KAG9439537.1 (hypothetical protein H6P81_019702 [Aristolochia fimbriata])

HSP 1 Score: 594.7 bits (1532), Expect = 4.5e-166
Identity = 291/329 (88.45%), Postives = 304/329 (92.40%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPIGKYTGDSDLQLDRINVYYNEASCGRFV 60
           MREILHIQGGQCGNQIGAKFWEV+C EHGID  GKY+GDSDLQL+RINVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60

Query: 61  PRAVLMDLEPGVMDSIRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPG MDS+RSGP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSF----------------CD 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TP+F                CD
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGSSVCD 240

Query: 241 IPPTGLKMASTFLGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 300
           IPP GLKMASTF+GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM
Sbjct: 241 IPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 300

Query: 301 NDLVSEYQQYQDATAEDEEYYEDE-DGVE 313
           NDLV+EYQQYQDATA+DEEY E+E DG E
Sbjct: 301 NDLVAEYQQYQDATADDEEYEEEEVDGAE 329

[Close]

BLAST of HG10020366 vs. NCBI nr
Match: THG06328.1 (hypothetical protein TEA_006881 [Camellia sinensis var. sinensis])

HSP 1 Score: 594.3 bits (1531), Expect = 5.9e-166
Identity = 286/318 (89.94%), Postives = 299/318 (94.03%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPIGKYTGDSDLQLDRINVYYNEASCGRFV 60
           MREILHIQGGQCGNQIG+KFWEVVC EHGIDP G+Y G SDLQL+R+NVYYNEASCGRFV
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGVMDSIRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPG MDS+R+GPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPS---------FCDIPPTGLK 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPS          CDIPP GL 
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSCEYTLQSSIVCDIPPRGLS 240

Query: 241 MASTFLGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 300
           MASTF+GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY
Sbjct: 241 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 300

Query: 301 QQYQDATAEDEEYYEDED 310
           QQYQDATA++E  Y+DE+
Sbjct: 301 QQYQDATADEEGEYDDEE 318

[Close]

BLAST of HG10020366 vs. ExPASy Swiss-Prot
Match: Q56YW9 (Tubulin beta-2 chain OS=Arabidopsis thaliana OX=3702 GN=TUBB2 PE=2 SV=2)

HSP 1 Score: 562.8 bits (1449), Expect = 2.5e-159
Identity = 297/446 (66.59%), Postives = 307/446 (68.83%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPIGKYTGDSDLQLDRINVYYNEASCGRFV 60
           MREILHIQGGQCGNQIGAKFWEVVCAEHGIDP G+YTGDSDLQL+RINVYYNEASCGRFV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGVMDSIRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPG MDS+RSGPYGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSF------------------ 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSF                  
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMM 300

Query: 301 -----------------------------------------------------CDIPPTG 316
                                                                CDIPPTG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

[Close]

BLAST of HG10020366 vs. ExPASy Swiss-Prot
Match: Q9ASR0 (Tubulin beta-3 chain OS=Arabidopsis thaliana OX=3702 GN=TUBB3 PE=2 SV=2)

HSP 1 Score: 562.8 bits (1449), Expect = 2.5e-159
Identity = 297/446 (66.59%), Postives = 307/446 (68.83%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPIGKYTGDSDLQLDRINVYYNEASCGRFV 60
           MREILHIQGGQCGNQIGAKFWEVVCAEHGIDP G+YTGDSDLQL+RINVYYNEASCGRFV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGVMDSIRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPG MDS+RSGPYGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSF------------------ 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSF                  
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMM 300

Query: 301 -----------------------------------------------------CDIPPTG 316
                                                                CDIPPTG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

[Close]

BLAST of HG10020366 vs. ExPASy Swiss-Prot
Match: Q8H7U1 (Tubulin beta-2 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB2 PE=2 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 8.1e-158
Identity = 292/440 (66.36%), Postives = 302/440 (68.64%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPIGKYTGDSDLQLDRINVYYNEASCGRFV 60
           MREILHIQGGQCGNQIGAKFWEVVCAEHGID  G+Y GDSDLQL+R+NVYYNEASCGRFV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGVMDSIRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPG MDS+RSGPYG +FRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSF------------------ 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSF                  
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 -----------------------------------------------------CDIPPTG 310
                                                                CDIPPTG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

[Close]

BLAST of HG10020366 vs. ExPASy Swiss-Prot
Match: P29501 (Tubulin beta-2 chain (Fragment) OS=Pisum sativum OX=3888 GN=TUBB2 PE=2 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 1.1e-157
Identity = 294/446 (65.92%), Postives = 307/446 (68.83%), Query Frame = 0


Query: 3   EILHIQGGQCGNQIGAKFWEVVCAEHGIDPIGKYTGDSDLQLDRINVYYNEASCGRFVPR 62
           EI+HIQGGQCGNQIGAKFWEVVCAEHGIDP G+Y GD+DLQL+RINVYYNEASCGR+VPR
Sbjct: 1   EIVHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYGGDTDLQLERINVYYNEASCGRYVPR 60

Query: 63  AVLMDLEPGVMDSIRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
           AVLMDLEPG MDS+RSGPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK
Sbjct: 61  AVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 120

Query: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 182
           EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP
Sbjct: 121 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 180

Query: 183 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSF-------------------- 242
           YNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSF                    
Sbjct: 181 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRF 240

Query: 243 ------------------------------------------------------------ 302
                                                                       
Sbjct: 241 PGQLNSDLRKLAVNLIPFPRLHFFMLGFAPLTSRGSQQYRALSVPEITQQMWDSKNMMCA 300

Query: 303 ---------------------------------------------------CDIPPTGLK 316
                                                              CDIPPTGLK
Sbjct: 301 ADPRHGRYLTASAIFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLK 360

[Close]

BLAST of HG10020366 vs. ExPASy Swiss-Prot
Match: P93176 (Tubulin beta chain OS=Hordeum vulgare OX=4513 GN=TUBB PE=2 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 1.4e-157
Identity = 293/446 (65.70%), Postives = 304/446 (68.16%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPIGKYTGDSDLQLDRINVYYNEASCGRFV 60
           MREILHIQGGQCGNQIGAKFWEVVC EHGIDP G+YTG SDLQL+R+NVYYNEASCGRFV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGVMDSIRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPG MDS+R+GPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSF------------------ 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSF                  
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 -----------------------------------------------------CDIPPTG 316
                                                                CDIPPTG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360

[Close]

BLAST of HG10020366 vs. ExPASy TrEMBL
Match: A0A200QUC5 (Tubulin beta chain OS=Macleaya cordata OX=56857 GN=BVC80_1787g149 PE=3 SV=1)

HSP 1 Score: 615.1 bits (1585), Expect = 1.6e-172
Identity = 294/314 (93.63%), Postives = 306/314 (97.45%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPIGKYTGDSDLQLDRINVYYNEASCGRFV 60
           MREILHIQGGQCGNQIGAKFWEVVCAEHGID  G+Y GDS+LQL+R+NVYYNEASCGRFV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYQGDSELQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGVMDSIRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPG MDS+RSGPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFCDIPPTGLKMASTFLGNS 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSFCDIPPTGLKMASTF+GNS
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFCDIPPTGLKMASTFIGNS 240

Query: 241 TSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAE 300
           TSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA+
Sbjct: 241 TSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAD 300

Query: 301 DEEYYEDEDGVEHD 315
           DE  YEDE+ ++ D
Sbjct: 301 DEGEYEDEEELQED 314

[Close]

BLAST of HG10020366 vs. ExPASy TrEMBL
Match: A0A5N6R5W4 (Tubulin beta chain OS=Carpinus fangiana OX=176857 GN=FH972_012157 PE=3 SV=1)

HSP 1 Score: 598.2 bits (1541), Expect = 2.0e-167
Identity = 291/334 (87.13%), Postives = 303/334 (90.72%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPIGKYTGDSDLQLDRINVYYNEASCGRFV 60
           MREILHIQGGQCGNQIGAKFWEVVCAEHGID  G+Y GD++LQL+R+NVYYNEASCGRFV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGDTELQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGVMDSIRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPG MDS+RSGPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSF------------------ 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPS+                  
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSYSFFFISVRRNSCYITWWI 240

Query: 241 --------CDIPPTGLKMASTFLGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDE 300
                   CDIPPTGLKMASTF+GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDE
Sbjct: 241 PNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDE 300

Query: 301 MEFTEAESNMNDLVSEYQQYQDATAEDEEYYEDE 309
           MEFTEAESNMNDLVSEYQQYQDATAE+EE YE+E
Sbjct: 301 MEFTEAESNMNDLVSEYQQYQDATAEEEEEYEEE 334

[Close]

BLAST of HG10020366 vs. ExPASy TrEMBL
Match: A0A4S4DSW9 (Tubulin beta chain OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_006881 PE=3 SV=1)

HSP 1 Score: 594.3 bits (1531), Expect = 2.9e-166
Identity = 286/318 (89.94%), Postives = 299/318 (94.03%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPIGKYTGDSDLQLDRINVYYNEASCGRFV 60
           MREILHIQGGQCGNQIG+KFWEVVC EHGIDP G+Y G SDLQL+R+NVYYNEASCGRFV
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGVMDSIRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPG MDS+R+GPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPS---------FCDIPPTGLK 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPS          CDIPP GL 
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSCEYTLQSSIVCDIPPRGLS 240

Query: 241 MASTFLGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 300
           MASTF+GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY
Sbjct: 241 MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 300

Query: 301 QQYQDATAEDEEYYEDED 310
           QQYQDATA++E  Y+DE+
Sbjct: 301 QQYQDATADEEGEYDDEE 318

[Close]

BLAST of HG10020366 vs. ExPASy TrEMBL
Match: A0A4S4EEK5 (Tubulin beta chain OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_018676 PE=3 SV=1)

HSP 1 Score: 591.7 bits (1524), Expect = 1.9e-165
Identity = 289/335 (86.27%), Postives = 302/335 (90.15%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPIGKYTGDSDLQLDRINVYYNEASCGRFV 60
           MREILHIQGGQCGNQIG+KFWEVVC EHGIDP G+Y G SDLQL+R+NVYYNEASCGRFV
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGVMDSIRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPG MDS+R+GPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTP-------------------- 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TP                    
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSCEYTLQSCLSAWIPNNVKS 240

Query: 241 SFCDIPPTGLKMASTFLGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 300
           S CDIPP GL MASTF+GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEA
Sbjct: 241 SVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 300

Query: 301 ESNMNDLVSEYQQYQDATAEDEEYYEDEDGVEHDE 316
           ESNMNDLVSEYQQYQDATA++E  YEDE+  E D+
Sbjct: 301 ESNMNDLVSEYQQYQDATADEEGEYEDEEEREMDQ 335

[Close]

BLAST of HG10020366 vs. ExPASy TrEMBL
Match: A0A200PZQ3 (Tubulin beta chain OS=Macleaya cordata OX=56857 GN=BVC80_1099g2 PE=3 SV=1)

HSP 1 Score: 590.5 bits (1521), Expect = 4.1e-165
Identity = 287/334 (85.93%), Postives = 300/334 (89.82%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPIGKYTGDSDLQLDRINVYYNEASCGRFV 60
           MREILH+QGGQCGNQIG+KFWEVVC EHGIDP G+YTG SDLQL+R+NVYYNEASCGRFV
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVVCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGVMDSIRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPG MDS+R+GPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTP-------------------- 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TP                    
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSCWNLWVVCPNIFDCGKWIP 240

Query: 241 -----SFCDIPPTGLKMASTFLGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEM 300
                S CDIPP GL MASTF+GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEM
Sbjct: 241 NNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEM 300

Query: 301 EFTEAESNMNDLVSEYQQYQDATAEDEEYYEDED 310
           EFTEAESNMNDLVSEYQQYQDATA++E  YEDE+
Sbjct: 301 EFTEAESNMNDLVSEYQQYQDATADEEGDYEDEE 334

[Close]

BLAST of HG10020366 vs. TAIR 10
Match: AT5G62690.1 (tubulin beta chain 2 )

HSP 1 Score: 562.8 bits (1449), Expect = 1.8e-160
Identity = 297/446 (66.59%), Postives = 307/446 (68.83%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPIGKYTGDSDLQLDRINVYYNEASCGRFV 60
           MREILHIQGGQCGNQIGAKFWEVVCAEHGIDP G+YTGDSDLQL+RINVYYNEASCGRFV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGVMDSIRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPG MDS+RSGPYGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSF------------------ 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSF                  
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMM 300

Query: 301 -----------------------------------------------------CDIPPTG 316
                                                                CDIPPTG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

[Close]

BLAST of HG10020366 vs. TAIR 10
Match: AT5G62700.1 (tubulin beta chain 3 )

HSP 1 Score: 562.8 bits (1449), Expect = 1.8e-160
Identity = 297/446 (66.59%), Postives = 307/446 (68.83%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPIGKYTGDSDLQLDRINVYYNEASCGRFV 60
           MREILHIQGGQCGNQIGAKFWEVVCAEHGIDP G+YTGDSDLQL+RINVYYNEASCGRFV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGVMDSIRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPG MDS+RSGPYGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSF------------------ 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSF                  
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMM 300

Query: 301 -----------------------------------------------------CDIPPTG 316
                                                                CDIPPTG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

[Close]

BLAST of HG10020366 vs. TAIR 10
Match: AT5G23860.1 (tubulin beta 8 )

HSP 1 Score: 555.8 bits (1431), Expect = 2.2e-158
Identity = 295/447 (66.00%), Postives = 307/447 (68.68%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPIGKYTGDSDLQLDRINVYYNEASCGRFV 60
           MREILHIQGGQCGNQIGAKFWEVVCAEHGID  G+Y G++DLQL+R+NVYYNEASCGRFV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGVMDSIRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPG MDS+RSGPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSF------------------ 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSF                  
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 -----------------------------------------------------CDIPPTG 316
                                                                CDIPPTG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

[Close]

BLAST of HG10020366 vs. TAIR 10
Match: AT5G23860.2 (tubulin beta 8 )

HSP 1 Score: 555.8 bits (1431), Expect = 2.2e-158
Identity = 295/447 (66.00%), Postives = 307/447 (68.68%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPIGKYTGDSDLQLDRINVYYNEASCGRFV 60
           MREILHIQGGQCGNQIGAKFWEVVCAEHGID  G+Y G++DLQL+R+NVYYNEASCGRFV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGVMDSIRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRAVLMDLEPG MDS+RSGPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSF------------------ 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSF                  
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 -----------------------------------------------------CDIPPTG 316
                                                                CDIPPTG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

[Close]

BLAST of HG10020366 vs. TAIR 10
Match: AT5G12250.1 (beta-6 tubulin )

HSP 1 Score: 547.7 bits (1410), Expect = 5.9e-156
Identity = 288/444 (64.86%), Postives = 302/444 (68.02%), Query Frame = 0


Query: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPIGKYTGDSDLQLDRINVYYNEASCGRFV 60
           MREILHIQGGQCGNQIG+KFWEVVC EHGIDP G+Y G+SDLQL+R+NVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGVMDSIRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
           PRA+LMDLEPG MDS+R+GPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSF------------------ 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSF                  
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 300

Query: 301 -----------------------------------------------------CDIPPTG 313
                                                                CDI P G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRG 360

The following BLAST results are available for this feature:

BLAST of HG10020366 vs. NCBI nr


Match Name	E-value	Identity	Description
OVA14069.1	3.2e-172	93.63	Tubulin [Macleaya cordata]	[more]
KAE8055308.1	4.1e-167	87.13	hypothetical protein FH972_012157 [Carpinus fangiana]	[more]
KAF9867281.1	4.1e-167	88.75	hypothetical protein H0E87_026127 [Populus deltoides]	[more]
KAG9439537.1	4.5e-166	88.45	hypothetical protein H6P81_019702 [Aristolochia fimbriata]	[more]
THG06328.1	5.9e-166	89.94	hypothetical protein TEA_006881 [Camellia sinensis var. sinensis]	[more]

BLAST of HG10020366 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56YW9	2.5e-159	66.59	Tubulin beta-2 chain OS=Arabidopsis thaliana OX=3702 GN=TUBB2 PE=2 SV=2	[more]
Q9ASR0	2.5e-159	66.59	Tubulin beta-3 chain OS=Arabidopsis thaliana OX=3702 GN=TUBB3 PE=2 SV=2	[more]
Q8H7U1	8.1e-158	66.36	Tubulin beta-2 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB2 PE=2 SV=1	[more]
P29501	1.1e-157	65.92	Tubulin beta-2 chain (Fragment) OS=Pisum sativum OX=3888 GN=TUBB2 PE=2 SV=1	[more]
P93176	1.4e-157	65.70	Tubulin beta chain OS=Hordeum vulgare OX=4513 GN=TUBB PE=2 SV=1	[more]

BLAST of HG10020366 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A200QUC5	1.6e-172	93.63	Tubulin beta chain OS=Macleaya cordata OX=56857 GN=BVC80_1787g149 PE=3 SV=1	[more]
A0A5N6R5W4	2.0e-167	87.13	Tubulin beta chain OS=Carpinus fangiana OX=176857 GN=FH972_012157 PE=3 SV=1	[more]
A0A4S4DSW9	2.9e-166	89.94	Tubulin beta chain OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_006881 PE...	[more]
A0A4S4EEK5	1.9e-165	86.27	Tubulin beta chain OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_018676 PE...	[more]
A0A200PZQ3	4.1e-165	85.93	Tubulin beta chain OS=Macleaya cordata OX=56857 GN=BVC80_1099g2 PE=3 SV=1	[more]

BLAST of HG10020366 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62690.1	1.8e-160	66.59	tubulin beta chain 2	[more]
AT5G62700.1	1.8e-160	66.59	tubulin beta chain 3	[more]
AT5G23860.1	2.2e-158	66.00	tubulin beta 8	[more]
AT5G23860.2	2.2e-158	66.00	tubulin beta 8	[more]
AT5G12250.1	5.9e-156	64.86	beta-6 tubulin	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 277..297
None	No IPR available	PANTHER	PTHR11588:SF336	TUBULIN BETA CHAIN	coord: 223..308
None	No IPR available	PANTHER	PTHR11588:SF336	TUBULIN BETA CHAIN	coord: 1..224
None	No IPR available	CDD	cd02187	beta_tubulin	coord: 2..295 e-value: 0.0 score: 541.002
IPR000217	Tubulin	PRINTS	PR01161	TUBULIN	coord: 51..70 score: 64.29 coord: 176..189 score: 79.11 coord: 93..104 score: 76.26 coord: 190..210 score: 67.82 coord: 106..130 score: 70.19 coord: 10..30 score: 71.41 coord: 132..150 score: 79.04 coord: 151..172 score: 59.63
IPR000217	Tubulin	PANTHER	PTHR11588	TUBULIN	coord: 223..308 coord: 1..224
IPR002453	Beta tubulin	PRINTS	PR01163	BETATUBULIN	coord: 212..224 score: 69.67 coord: 88..99 score: 94.76 coord: 152..164 score: 91.43 coord: 108..126 score: 87.58 coord: 41..58 score: 74.03
IPR003008	Tubulin/FtsZ, GTPase domain	SMART	SM00864	Tubulin_4	coord: 47..241 e-value: 9.1E-55 score: 197.9
IPR003008	Tubulin/FtsZ, GTPase domain	PFAM	PF00091	Tubulin	coord: 3..211 e-value: 3.0E-70 score: 236.4
IPR036525	Tubulin/FtsZ, GTPase domain superfamily	GENE3D	3.40.50.1440	Tubulin/FtsZ, GTPase domain	coord: 1..267 e-value: 7.9E-112 score: 375.0
IPR036525	Tubulin/FtsZ, GTPase domain superfamily	SUPERFAMILY	52490	Tubulin nucleotide-binding domain-like	coord: 1..225
IPR013838	Beta tubulin, autoregulation binding site	PROSITE	PS00228	TUBULIN_B_AUTOREG	coord: 1..4
IPR017975	Tubulin, conserved site	PROSITE	PS00227	TUBULIN	coord: 140..146
IPR008280	Tubulin/FtsZ, C-terminal	SUPERFAMILY	55307	Tubulin C-terminal domain-like	coord: 221..295

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10020366.1	HG10020366.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007010	cytoskeleton organization
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0005874	microtubule
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005200	structural constituent of cytoskeleton