HG10020299 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020299
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Actin-depolymerizing factor
Location	Chr04: 30664979 .. 30666765 (+)
RNA-Seq Expression	HG10020299
Synteny	HG10020299

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAGTCCTCCGAAGCTTACTTAATTTCTGCTTTTATTCGTGATTTGACGATCGGTATGGTTCTTGAGAAAGTAGGATTGTATGTTTAGTTTGTCATTTTTAAAATCACTACACTCTCGCGATCGGGAGTTTCTTGCAATTTGTGGAGTTTGTGTACCTCTGGTACATGATTTTGAAGTAATAATCCGCATGCAGTTTCCAGGATGGGGAGTGAATGCATTATTGTTACATAAAGATCTGATTTGAATTCTACTGTGGTTTTCTTCAACTAAGCGAAACGTCATTTTCTTTAATTTACTATAGACTTCAGGTAATCCAGTGGCCTTGGATCTATTATGATCATCGTTTTGATTTTTGTACTTCTTATTTTGTTATGTTTGAAATTTCTGTCAATGATTGCAATTACAAGTTATATTCCTGTATTCTCCCTTTGAATTGCTATTAATCTTCTCTTTGCATGCTGTAAATGAAGTTGAGATTCCGTCGAGTTGTGAATTTGCTTTAAATTTGGTTGCAAATCAATATCAGCTATCAAGATATGAGGGGGGAAATCTTATCCTGCCCATTTACTTGTTACAAGATTATCTTACTTTGACTCGGTGTTTTCTAAAGCTACTAAAACGCAATAGCCCTTTGGAACTTAGAGGTTTCATCAGGCGCACAGTAGACAAATGTAAATGAAATTTTAATATAAGTAGAAAAACAGTAGGATGAATAAGAAGAAAATAGAGATTTCACTTGAGATTATAAGAAATTCTATGCATTTCTTTCTTGAAAATTAGAAAAATTAATAAAAGAGAGTAGGAAATCAGACTCGAGAGCTGAGGCGCACACTATAAGTGCTAAGGCGCATGCCTCAAGCGGGCTTTATTTAGGGAGCCTTTGCTTGAAAGGCTTCTTTGAAGCAAGGCACAGAGGTCGGGCTTAAGCGCATCTAGGAGCTTGACTCAACAGAAAATTTGACTAAATATGACCCCAAATTTATGGCTAAGATAAGGGCTCTCAAGGGAGAAAGAGAACAATTATTGAAAACTTGCAAAATCTGATCAGATCAGAAAGATTCTTTTGTTCCCAATTTTCTGCATTTCCAGTGTTAGGTTAAACAATATTCACCCCACTGTTTTGCTTTTGCAGCCTTTGTGTTTTATAGCTGTATTATAATATAATCAAGAGCATTTTATTTTCCAAGTTTGTTACTGCCGTTTCAATTCGTTATGTATGCATCTCTTTTGGACTTCGAAGGTTTTTTTTTTAAAAGTAGTTTCATTCTGGACTTTATAGGCCAATGCAGCATCGGGAATGGCCGTGAATGATGATTGCAAGCTGAAGTTTTTGGAGCTGAAAGCGAAAAGAACCTATCGCTTTATTGTGTTTAAGATCGAGGAGAAGCAAAAGCAAGTTGTAGTAGAGAAAGTTGGTGAGCCAACACAAAGTTATGAGGACTTTGCTGCAAGCCTCCCTTCAGACGAATGCCGTTATGCTATCTATGATTTCGACTTCGTTACCGAAGAGAACTGTCAGAAGAGCAGAATCTTCTTTATTGGCTGGTATAGCTAACATCTTCTTTACTATCCCTTTCATGTTTGTCTTTCCAACTATCACACGCTAACAAAAAAAACGCCATTCTTTGAAGGTCCCCTGATAATTCAAGAGTCAGAAGCAAGATGATATATGCAAGCTCCAAAGATAGATTCAAGAGAGAGCTGGATGGCTTTCAAGTTGAACTTCAAGCAACTGATCCGACCGAGATGGGTCTTGATGTCATTCGAAGCCGAGTTGGCTGA

mRNA sequence

ATGGCCAATGCAGCATCGGGAATGGCCGTGAATGATGATTGCAAGCTGAAGTTTTTGGAGCTGAAAGCGAAAAGAACCTATCGCTTTATTGTGTTTAAGATCGAGGAGAAGCAAAAGCAAGTTGTAGTAGAGAAAGTTGGTGAGCCAACACAAAGTTATGAGGACTTTGCTGCAAGCCTCCCTTCAGACGAATGCCGTTATGCTATCTATGATTTCGACTTCGTTACCGAAGAGAACTGTCAGAAGAGCAGAATCTTCTTTATTGGCTGGTCCCCTGATAATTCAAGAGTCAGAAGCAAGATGATATATGCAAGCTCCAAAGATAGATTCAAGAGAGAGCTGGATGGCTTTCAAGTTGAACTTCAAGCAACTGATCCGACCGAGATGGGTCTTGATGTCATTCGAAGCCGAGTTGGCTGA

Coding sequence (CDS)

ATGGCCAATGCAGCATCGGGAATGGCCGTGAATGATGATTGCAAGCTGAAGTTTTTGGAGCTGAAAGCGAAAAGAACCTATCGCTTTATTGTGTTTAAGATCGAGGAGAAGCAAAAGCAAGTTGTAGTAGAGAAAGTTGGTGAGCCAACACAAAGTTATGAGGACTTTGCTGCAAGCCTCCCTTCAGACGAATGCCGTTATGCTATCTATGATTTCGACTTCGTTACCGAAGAGAACTGTCAGAAGAGCAGAATCTTCTTTATTGGCTGGTCCCCTGATAATTCAAGAGTCAGAAGCAAGATGATATATGCAAGCTCCAAAGATAGATTCAAGAGAGAGCTGGATGGCTTTCAAGTTGAACTTCAAGCAACTGATCCGACCGAGATGGGTCTTGATGTCATTCGAAGCCGAGTTGGCTGA

Protein sequence

MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLPSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVELQATDPTEMGLDVIRSRVG

Homology

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BLAST of HG10020299 vs. NCBI nr
Match: XP_038905295.1 (actin-depolymerizing factor 2-like [Benincasa hispida] >XP_038905296.1 actin-depolymerizing factor 2-like [Benincasa hispida] >XP_038905297.1 actin-depolymerizing factor 2-like [Benincasa hispida])

HSP 1 Score: 276.6 bits (706), Expect = 1.2e-70
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           PSDECRYAIYDFDFVTEENCQKSRIFFI WSPDNSRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 121 LQATDPTEMGLDVIRSRVG 140
           LQATDPTEMGLDVIRSRVG
Sbjct: 121 LQATDPTEMGLDVIRSRVG 139

[Close]

BLAST of HG10020299 vs. NCBI nr
Match: XP_022935027.1 (actin-depolymerizing factor 2-like [Cucurbita moschata] >XP_023528602.1 actin-depolymerizing factor 2-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG6580558.1 Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 273.9 bits (699), Expect = 7.8e-70
Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASG+AVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P+DECRYAIYDFDFVTEENCQKSRIFFI WSPDNSRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PADECRYAIYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 121 LQATDPTEMGLDVIRSRVG 140
           LQATDPTEMGLDVIRSRVG
Sbjct: 121 LQATDPTEMGLDVIRSRVG 139

[Close]

BLAST of HG10020299 vs. NCBI nr
Match: XP_022945981.1 (actin-depolymerizing factor 2-like isoform X2 [Cucurbita moschata] >XP_022971271.1 actin-depolymerizing factor 2-like isoform X2 [Cucurbita maxima] >XP_023005853.1 actin-depolymerizing factor 2-like isoform X2 [Cucurbita maxima] >KAG6596418.1 Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 272.3 bits (695), Expect = 2.3e-69
Identity = 135/139 (97.12%), Postives = 136/139 (97.84%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAVNDDCKLKFL LKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           PSDECRYA+YDFDFVTEENCQKSRIFFI WSPDNSRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 121 LQATDPTEMGLDVIRSRVG 140
           LQATDPTEMGLDVIRSR G
Sbjct: 121 LQATDPTEMGLDVIRSRAG 139

[Close]

BLAST of HG10020299 vs. NCBI nr
Match: XP_022983563.1 (actin-depolymerizing factor 2-like [Cucurbita maxima])

HSP 1 Score: 272.3 bits (695), Expect = 2.3e-69
Identity = 135/139 (97.12%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASG+AVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P+DECRYAIYDFDFVT+ENCQKSRIFFI WSPDNSRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PADECRYAIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 121 LQATDPTEMGLDVIRSRVG 140
           LQATDPTEMGLDVIRSRVG
Sbjct: 121 LQATDPTEMGLDVIRSRVG 139

[Close]

BLAST of HG10020299 vs. NCBI nr
Match: KAG7017313.1 (Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 271.9 bits (694), Expect = 3.0e-69
Identity = 135/138 (97.83%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 2   ANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLP 61
           ANAASG+AVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLP
Sbjct: 66  ANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLP 125

Query: 62  SDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVEL 121
           +DECRYAIYDFDFVTEENCQKSRIFFI WSPDNSRVRSKMIYASSKDRFKRELDGFQVEL
Sbjct: 126 ADECRYAIYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVEL 185

Query: 122 QATDPTEMGLDVIRSRVG 140
           QATDPTEMGLDVIRSRVG
Sbjct: 186 QATDPTEMGLDVIRSRVG 203

[Close]

BLAST of HG10020299 vs. ExPASy Swiss-Prot
Match: Q9FVI1 (Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 3.5e-65
Identity = 120/139 (86.33%), Postives = 131/139 (94.24%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAV+DDCKLKFLELKAKRTYRFI++KIEEKQK+VVVEK+GEPT+SYEDF A L
Sbjct: 1   MANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P+DECRYA+YDFDF+T+EN QKSRIFFI WSPD +RVRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PADECRYAVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRVG 140
           LQATDPTEMGLDV RSR G
Sbjct: 121 LQATDPTEMGLDVFRSRAG 139

[Close]

BLAST of HG10020299 vs. ExPASy Swiss-Prot
Match: Q9FVI2 (Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.0e-64
Identity = 120/137 (87.59%), Postives = 130/137 (94.89%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAV+DDCKL+FLELKAKRT+RFIV+KIEEKQKQVVVEK+GEPT+SYEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P +ECRYA+YDFDFVT ENCQKSRIFFI W PD +RVRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSR 138
           LQA DPTEMGLDVI+SR
Sbjct: 121 LQACDPTEMGLDVIQSR 137

[Close]

BLAST of HG10020299 vs. ExPASy Swiss-Prot
Match: Q9ZSK3 (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2)

HSP 1 Score: 242.3 bits (617), Expect = 3.3e-63
Identity = 118/138 (85.51%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAV+DDCKL+FLELKAKRT+RFIV+KIEEKQKQV+VEKVGEP  +YEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P+DECRYAIYDFDFVT ENCQKS+IFFI W PD ++VRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRV 139
           LQATDPTEM LDV++SRV
Sbjct: 121 LQATDPTEMDLDVLKSRV 138

[Close]

BLAST of HG10020299 vs. ExPASy Swiss-Prot
Match: Q0DLA3 (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF7 PE=3 SV=2)

HSP 1 Score: 241.5 bits (615), Expect = 5.6e-63
Identity = 116/137 (84.67%), Postives = 130/137 (94.89%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAV+D+CKLKFLELKAKRTYRFI++KI+EK+K VVVEKVGEP  +Y+DFAASL
Sbjct: 1   MANAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P++ECRYAI+D+DFVTEENCQKS+IFFI WSPD SRVRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSR 138
           LQATDPTE+GLDVIR R
Sbjct: 121 LQATDPTEVGLDVIRGR 137

[Close]

BLAST of HG10020299 vs. ExPASy Swiss-Prot
Match: Q39250 (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 2.1e-62
Identity = 117/137 (85.40%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAV+DDCKL+FLELKAKRT+RFIV+KIEEKQKQVVVEKVG+P Q+YE+FAA L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P+DECRYAIYDFDFVT ENCQKS+IFFI W PD ++VRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSR 138
           LQATDPTEM LDV RSR
Sbjct: 121 LQATDPTEMDLDVFRSR 137

[Close]

BLAST of HG10020299 vs. ExPASy TrEMBL
Match: A0A6J1F4F4 (actin-depolymerizing factor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111442017 PE=3 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 3.8e-70
Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASG+AVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P+DECRYAIYDFDFVTEENCQKSRIFFI WSPDNSRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PADECRYAIYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 121 LQATDPTEMGLDVIRSRVG 140
           LQATDPTEMGLDVIRSRVG
Sbjct: 121 LQATDPTEMGLDVIRSRVG 139

[Close]

BLAST of HG10020299 vs. ExPASy TrEMBL
Match: A0A6J1L3B8 (actin-depolymerizing factor 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498729 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.1e-69
Identity = 135/139 (97.12%), Postives = 136/139 (97.84%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAVNDDCKLKFL LKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           PSDECRYA+YDFDFVTEENCQKSRIFFI WSPDNSRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 121 LQATDPTEMGLDVIRSRVG 140
           LQATDPTEMGLDVIRSR G
Sbjct: 121 LQATDPTEMGLDVIRSRAG 139

[Close]

BLAST of HG10020299 vs. ExPASy TrEMBL
Match: A0A6J1J833 (actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111482130 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.1e-69
Identity = 135/139 (97.12%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASG+AVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P+DECRYAIYDFDFVT+ENCQKSRIFFI WSPDNSRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PADECRYAIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 121 LQATDPTEMGLDVIRSRVG 140
           LQATDPTEMGLDVIRSRVG
Sbjct: 121 LQATDPTEMGLDVIRSRVG 139

[Close]

BLAST of HG10020299 vs. ExPASy TrEMBL
Match: A0A6J1G2E2 (actin-depolymerizing factor 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450067 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.1e-69
Identity = 135/139 (97.12%), Postives = 136/139 (97.84%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAVNDDCKLKFL LKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           PSDECRYA+YDFDFVTEENCQKSRIFFI WSPDNSRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 121 LQATDPTEMGLDVIRSRVG 140
           LQATDPTEMGLDVIRSR G
Sbjct: 121 LQATDPTEMGLDVIRSRAG 139

[Close]

BLAST of HG10020299 vs. ExPASy TrEMBL
Match: A0A1S3B603 (actin-depolymerizing factor 2-like OS=Cucumis melo OX=3656 GN=LOC103486402 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.2e-69
Identity = 135/139 (97.12%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAV+DDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFA SL
Sbjct: 1   MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAKSL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           PSDECRYAIYDFDFVTEENCQKSRIFFI WSPD+SRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIAWSPDSSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 121 LQATDPTEMGLDVIRSRVG 140
           LQATDPTEMGLDVIRSRVG
Sbjct: 121 LQATDPTEMGLDVIRSRVG 139

[Close]

BLAST of HG10020299 vs. TAIR 10
Match: AT5G59890.1 (actin depolymerizing factor 4 )

HSP 1 Score: 242.3 bits (617), Expect = 2.4e-64
Identity = 118/138 (85.51%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAV+DDCKL+FLELKAKRT+RFIV+KIEEKQKQV+VEKVGEP  +YEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P+DECRYAIYDFDFVT ENCQKS+IFFI W PD ++VRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRV 139
           LQATDPTEM LDV++SRV
Sbjct: 121 LQATDPTEMDLDVLKSRV 138

[Close]

BLAST of HG10020299 vs. TAIR 10
Match: AT3G46010.1 (actin depolymerizing factor 1 )

HSP 1 Score: 239.6 bits (610), Expect = 1.5e-63
Identity = 117/137 (85.40%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAV+DDCKL+FLELKAKRT+RFIV+KIEEKQKQVVVEKVG+P Q+YE+FAA L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P+DECRYAIYDFDFVT ENCQKS+IFFI W PD ++VRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSR 138
           LQATDPTEM LDV RSR
Sbjct: 121 LQATDPTEMDLDVFRSR 137

[Close]

BLAST of HG10020299 vs. TAIR 10
Match: AT3G46010.2 (actin depolymerizing factor 1 )

HSP 1 Score: 237.7 bits (605), Expect = 5.8e-63
Identity = 116/136 (85.29%), Postives = 127/136 (93.38%), Query Frame = 0


Query: 2   ANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLP 61
           ANAASGMAV+DDCKL+FLELKAKRT+RFIV+KIEEKQKQVVVEKVG+P Q+YE+FAA LP
Sbjct: 13  ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP 72

Query: 62  SDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVEL 121
           +DECRYAIYDFDFVT ENCQKS+IFFI W PD ++VRSKMIYASSKDRFKRELDG QVEL
Sbjct: 73  ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVEL 132

Query: 122 QATDPTEMGLDVIRSR 138
           QATDPTEM LDV RSR
Sbjct: 133 QATDPTEMDLDVFRSR 148

[Close]

BLAST of HG10020299 vs. TAIR 10
Match: AT3G46000.1 (actin depolymerizing factor 2 )

HSP 1 Score: 231.1 bits (588), Expect = 5.4e-61
Identity = 112/137 (81.75%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAV+DDCKLKF+ELKAKRT+R IV+KIE+  KQV+VEK+GEP QSY+DFAASL
Sbjct: 1   MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIED--KQVIVEKLGEPEQSYDDFAASL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P+D+CRY IYDFDFVT ENCQKS+IFFI WSPD ++VR KMIYASSKDRFKRELDG QVE
Sbjct: 61  PADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSR 138
           LQATDPTEMGLDV +SR
Sbjct: 121 LQATDPTEMGLDVFKSR 135

[Close]

BLAST of HG10020299 vs. TAIR 10
Match: AT5G59890.2 (actin depolymerizing factor 4 )

HSP 1 Score: 229.6 bits (584), Expect = 1.6e-60
Identity = 111/131 (84.73%), Postives = 123/131 (93.89%), Query Frame = 0


Query: 8   MAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLPSDECRY 67
           MAV+DDCKL+FLELKAKRT+RFIV+KIEEKQKQV+VEKVGEP  +YEDFAASLP+DECRY
Sbjct: 1   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRY 60

Query: 68  AIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVELQATDPT 127
           AIYDFDFVT ENCQKS+IFFI W PD ++VRSKMIYASSKDRFKRELDG QVELQATDPT
Sbjct: 61  AIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120

Query: 128 EMGLDVIRSRV 139
           EM LDV++SRV
Sbjct: 121 EMDLDVLKSRV 131

The following BLAST results are available for this feature:

BLAST of HG10020299 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905295.1	1.2e-70	99.28	actin-depolymerizing factor 2-like [Benincasa hispida] >XP_038905296.1 actin-dep...	[more]
XP_022935027.1	7.8e-70	97.84	actin-depolymerizing factor 2-like [Cucurbita moschata] >XP_023528602.1 actin-de...	[more]
XP_022945981.1	2.3e-69	97.12	actin-depolymerizing factor 2-like isoform X2 [Cucurbita moschata] >XP_022971271...	[more]
XP_022983563.1	2.3e-69	97.12	actin-depolymerizing factor 2-like [Cucurbita maxima]	[more]
KAG7017313.1	3.0e-69	97.83	Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. argyrosper...	[more]

BLAST of HG10020299 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FVI1	3.5e-65	86.33	Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1	[more]
Q9FVI2	1.0e-64	87.59	Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1	[more]
Q9ZSK3	3.3e-63	85.51	Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2	[more]
Q0DLA3	5.6e-63	84.67	Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF7 P...	[more]
Q39250	2.1e-62	85.40	Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1	[more]

BLAST of HG10020299 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F4F4	3.8e-70	97.84	actin-depolymerizing factor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111442017...	[more]
A0A6J1L3B8	1.1e-69	97.12	actin-depolymerizing factor 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1J833	1.1e-69	97.12	actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111482130 P...	[more]
A0A6J1G2E2	1.1e-69	97.12	actin-depolymerizing factor 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A1S3B603	3.2e-69	97.12	actin-depolymerizing factor 2-like OS=Cucumis melo OX=3656 GN=LOC103486402 PE=3 ...	[more]

BLAST of HG10020299 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59890.1	2.4e-64	85.51	actin depolymerizing factor 4	[more]
AT3G46010.1	1.5e-63	85.40	actin depolymerizing factor 1	[more]
AT3G46010.2	5.8e-63	85.29	actin depolymerizing factor 1	[more]
AT3G46000.1	5.4e-61	81.75	actin depolymerizing factor 2	[more]
AT5G59890.2	1.6e-60	84.73	actin depolymerizing factor 4	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 12..139 e-value: 1.4E-59 score: 213.9
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 14..136 e-value: 4.8E-37 score: 126.5
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 7..139 score: 39.79863
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 1..139 e-value: 1.1E-52 score: 180.1
None	No IPR available	PANTHER	PTHR11913:SF74	ACTIN-DEPOLYMERIZING FACTOR 2-LIKE	coord: 1..137
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 3..138
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 1..137
IPR017904	ADF/Cofilin	CDD	cd11286	ADF_cofilin_like	coord: 6..138 e-value: 2.52245E-65 score: 193.157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10020299.1	HG10020299.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0003779	actin binding