HG10020293 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020293
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Unknown protein
Location	Chr04: 30631259 .. 30631897 (+)
RNA-Seq Expression	HG10020293
Synteny	HG10020293

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTTCCCCTACAACACCGCCAATTTCGACAACCTTCTTCTTCAAACTCTCATGGGGAGGCTCCAAATTGGGCCTCCAAACAACAACAATCCCCTTCCCTCCCAATCCCTCGAAGAACTTCTCTTCGACGCCGCCGATCTCTTCGACGATGACAACGACGAAAACAAAACCCAGCTCGCGAAAGAGGAATTGAAGCTCGAGCTTGAGATTATTCGCGTTATTTTCTCCGGAAATACCGATTCCCTAAAACCCAATTCCGGTCAGGCCGTCACAATCGGCGAGCACCACATATGCGTGGGGTTTCAAGAGGAGAAGGATTCAGATTATCGAGTTTGGGAATGGCACGGGCATATCATGTTGTTTGATGAAGAAAATGGGTACTCGCCGGAGTATATCTATGGGAACTACTTTGAGAGGCTTCAGGGAAAGTTCAACCGTGAGTTGAATAAACGAAGAGAGGAAGAAGAGGAGGAGGACGAGGAGGAGGAAGAAGAAGATGAAAAAGAGGAGAAGGTGGGCAACTTGGGACTTCGGGAGCTGATTGATGGCGGTGGTTCGAGTGCCGGTCGGATTCTTCATCGTAATGTCAACGCCAGTTCTCAAAGGTTCCGCATAATTTACTGTCAATTTTGCTGA

mRNA sequence

ATGAATTTCCCCTACAACACCGCCAATTTCGACAACCTTCTTCTTCAAACTCTCATGGGGAGGCTCCAAATTGGGCCTCCAAACAACAACAATCCCCTTCCCTCCCAATCCCTCGAAGAACTTCTCTTCGACGCCGCCGATCTCTTCGACGATGACAACGACGAAAACAAAACCCAGCTCGCGAAAGAGGAATTGAAGCTCGAGCTTGAGATTATTCGCGTTATTTTCTCCGGAAATACCGATTCCCTAAAACCCAATTCCGGTCAGGCCGTCACAATCGGCGAGCACCACATATGCGTGGGGTTTCAAGAGGAGAAGGATTCAGATTATCGAGTTTGGGAATGGCACGGGCATATCATGTTGTTTGATGAAGAAAATGGGTACTCGCCGGAGTATATCTATGGGAACTACTTTGAGAGGCTTCAGGGAAAGTTCAACCGTGAGTTGAATAAACGAAGAGAGGAAGAAGAGGAGGAGGACGAGGAGGAGGAAGAAGAAGATGAAAAAGAGGAGAAGGTGGGCAACTTGGGACTTCGGGAGCTGATTGATGGCGGTGGTTCGAGTGCCGGTCGGATTCTTCATCGTAATGTCAACGCCAGTTCTCAAAGGTTCCGCATAATTTACTGTCAATTTTGCTGA

Coding sequence (CDS)

ATGAATTTCCCCTACAACACCGCCAATTTCGACAACCTTCTTCTTCAAACTCTCATGGGGAGGCTCCAAATTGGGCCTCCAAACAACAACAATCCCCTTCCCTCCCAATCCCTCGAAGAACTTCTCTTCGACGCCGCCGATCTCTTCGACGATGACAACGACGAAAACAAAACCCAGCTCGCGAAAGAGGAATTGAAGCTCGAGCTTGAGATTATTCGCGTTATTTTCTCCGGAAATACCGATTCCCTAAAACCCAATTCCGGTCAGGCCGTCACAATCGGCGAGCACCACATATGCGTGGGGTTTCAAGAGGAGAAGGATTCAGATTATCGAGTTTGGGAATGGCACGGGCATATCATGTTGTTTGATGAAGAAAATGGGTACTCGCCGGAGTATATCTATGGGAACTACTTTGAGAGGCTTCAGGGAAAGTTCAACCGTGAGTTGAATAAACGAAGAGAGGAAGAAGAGGAGGAGGACGAGGAGGAGGAAGAAGAAGATGAAAAAGAGGAGAAGGTGGGCAACTTGGGACTTCGGGAGCTGATTGATGGCGGTGGTTCGAGTGCCGGTCGGATTCTTCATCGTAATGTCAACGCCAGTTCTCAAAGGTTCCGCATAATTTACTGTCAATTTTGCTGA

Protein sequence

MNFPYNTANFDNLLLQTLMGRLQIGPPNNNNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHGHIMLFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGRILHRNVNASSQRFRIIYCQFC

Homology

[Close]

BLAST of HG10020293 vs. NCBI nr
Match: XP_022145740.1 (uncharacterized protein LOC111015123 [Momordica charantia])

HSP 1 Score: 344.7 bits (883), Expect = 5.5e-91
Identity = 178/201 (88.56%), Postives = 188/201 (93.53%), Query Frame = 0


Query: 6   NTANFDNLLLQTLMGRLQIGPPNNNNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEEL 65
           NTANFDNLLLQTLMGRLQI PPNNNNPL SQSLE+LLFDAA+L DDDND+NKTQLAKEE 
Sbjct: 6   NTANFDNLLLQTLMGRLQIRPPNNNNPLLSQSLEDLLFDAANLSDDDNDDNKTQLAKEES 65

Query: 66  KLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHGHIMLFDEE 125
           KLE EIIRVI +GNTDSLKPNSGQAVTIGEHHICVGF EEKDSDYRVWEWHGHIMLFDEE
Sbjct: 66  KLEKEIIRVILTGNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIMLFDEE 125

Query: 126 NGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEE--EEEEDEKEEKVGNLGLRELID 185
           NGYSPEYIYGNYFERLQGK NRELNKR+EE+E+E+EE  EEE+DEK+EKVG LGLRELID
Sbjct: 126 NGYSPEYIYGNYFERLQGKVNRELNKRKEEQEQEEEEEGEEEDDEKDEKVGKLGLRELID 185

Query: 186 GGGSSAGRILHRNVNASSQRF 205
           GG SS GRILHRNVNASSQRF
Sbjct: 186 GGDSSGGRILHRNVNASSQRF 206

[Close]

BLAST of HG10020293 vs. NCBI nr
Match: XP_038905389.1 (AT-rich interactive domain-containing protein 4B isoform X2 [Benincasa hispida] >XP_038905390.1 AT-rich interactive domain-containing protein 4B isoform X2 [Benincasa hispida])

HSP 1 Score: 333.6 bits (854), Expect = 1.3e-87
Identity = 176/206 (85.44%), Postives = 186/206 (90.29%), Query Frame = 0


Query: 1   MNFPYNTANFDNLLLQTLMGRLQIGPPNN--NNPLPSQSLEELLFDAADLFDDDNDENKT 60
           MN   NTANFDNLLLQTLM RL I P NN  NNPL SQSLEELLFDAA+L DDDNDENKT
Sbjct: 1   MNSFANTANFDNLLLQTLMERLHIRPSNNNHNNPLLSQSLEELLFDAANLSDDDNDENKT 60

Query: 61  QLAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHGH 120
           QLAKEE KLE EIIRVI +GNTDSLKPNSGQAVTIGEHHICV F EEKDSD+RVWEWHGH
Sbjct: 61  QLAKEESKLEKEIIRVILAGNTDSLKPNSGQAVTIGEHHICVAFHEEKDSDFRVWEWHGH 120

Query: 121 IMLFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGL 180
           +MLFDEE+GYSPEYIYGNYFERL+GK NRELNKR+EEEEEEDEEEEE+DEKEEKVG LGL
Sbjct: 121 VMLFDEEDGYSPEYIYGNYFERLRGKVNRELNKRKEEEEEEDEEEEEDDEKEEKVGKLGL 180

Query: 181 RELIDGGGSSAGRILHRNVNASSQRF 205
           RELIDGG S+A RILHRNV+ASSQRF
Sbjct: 181 RELIDGGDSTAARILHRNVSASSQRF 206

[Close]

BLAST of HG10020293 vs. NCBI nr
Match: XP_038905388.1 (AT-rich interactive domain-containing protein 4B isoform X1 [Benincasa hispida])

HSP 1 Score: 331.3 bits (848), Expect = 6.3e-87
Identity = 175/205 (85.37%), Postives = 185/205 (90.24%), Query Frame = 0


Query: 1   MNFPYNTANFDNLLLQTLMGRLQIGPPNN--NNPLPSQSLEELLFDAADLFDDDNDENKT 60
           MN   NTANFDNLLLQTLM RL I P NN  NNPL SQSLEELLFDAA+L DDDNDENKT
Sbjct: 1   MNSFANTANFDNLLLQTLMERLHIRPSNNNHNNPLLSQSLEELLFDAANLSDDDNDENKT 60

Query: 61  QLAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHGH 120
           QLAKEE KLE EIIRVI +GNTDSLKPNSGQAVTIGEHHICV F EEKDSD+RVWEWHGH
Sbjct: 61  QLAKEESKLEKEIIRVILAGNTDSLKPNSGQAVTIGEHHICVAFHEEKDSDFRVWEWHGH 120

Query: 121 IMLFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGL 180
           +MLFDEE+GYSPEYIYGNYFERL+GK NRELNKR+EEEEEEDEEEEE+DEKEEKVG LGL
Sbjct: 121 VMLFDEEDGYSPEYIYGNYFERLRGKVNRELNKRKEEEEEEDEEEEEDDEKEEKVGKLGL 180

Query: 181 RELIDGGGSSAGRILHRNVNASSQR 204
           RELIDGG S+A RILHRNV+ASSQR
Sbjct: 181 RELIDGGDSTAARILHRNVSASSQR 205

[Close]

BLAST of HG10020293 vs. NCBI nr
Match: KAG6596424.1 (hypothetical protein SDJN03_09604, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 327.8 bits (839), Expect = 7.0e-86
Identity = 171/204 (83.82%), Postives = 181/204 (88.73%), Query Frame = 0


Query: 1   MNFPYNTANFDNLLLQTLMGRLQIGPPNNNNPLPSQSLEELLFDAADLFDDDNDENKTQL 60
           MN   NTANFDNLLLQTLMGRLQI P +NNNPL +QSLE+LLFDAA+L DDDNDENKTQL
Sbjct: 1   MNSFNNTANFDNLLLQTLMGRLQIRPQSNNNPLLAQSLEDLLFDAANLSDDDNDENKTQL 60

Query: 61  AKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHGHIM 120
           AKEE  LE EIIRVI  GN DSLKPNSGQAVTIGEHH+CVGF EEKDSDYRVWEWHGHIM
Sbjct: 61  AKEESMLEKEIIRVILGGNIDSLKPNSGQAVTIGEHHVCVGFHEEKDSDYRVWEWHGHIM 120

Query: 121 LFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRE 180
           LFDEENGYSPEYIYGNYFERLQGK NRELNK+   E  E+EEEE++DEKEE+VG LGLRE
Sbjct: 121 LFDEENGYSPEYIYGNYFERLQGKVNRELNKK---EAAEEEEEEDDDEKEEEVGKLGLRE 180

Query: 181 LIDGGGSSAGRILHRNVNASSQRF 205
           LIDGG SS GRILHRNVNASSQRF
Sbjct: 181 LIDGGDSSGGRILHRNVNASSQRF 201

[Close]

BLAST of HG10020293 vs. NCBI nr
Match: XP_022934613.1 (uncharacterized protein LOC111441746 [Cucurbita moschata])

HSP 1 Score: 325.9 bits (834), Expect = 2.6e-85
Identity = 169/199 (84.92%), Postives = 179/199 (89.95%), Query Frame = 0


Query: 6   NTANFDNLLLQTLMGRLQIGPPNNNNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEEL 65
           NTANFDNLLLQTLMGRLQI P +NNNPL +QSLE+LLFDAA+L DDDNDENKTQLAKEE 
Sbjct: 6   NTANFDNLLLQTLMGRLQIRPQSNNNPLLAQSLEDLLFDAANLSDDDNDENKTQLAKEES 65

Query: 66  KLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHGHIMLFDEE 125
            LE EIIRVI  GN DSLKPNSGQAVTIGEHHICVGF EEKDSDYRVWEWHGHIMLFDEE
Sbjct: 66  MLEKEIIRVILGGNIDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIMLFDEE 125

Query: 126 NGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGG 185
           NGYSPEYIYGNYFERLQGK NRELNK+   E  E+EEE+++DEKEE+VG LGLRELIDGG
Sbjct: 126 NGYSPEYIYGNYFERLQGKVNRELNKK---EAAEEEEEDDDDEKEEEVGKLGLRELIDGG 185

Query: 186 GSSAGRILHRNVNASSQRF 205
            SS GRILHRNVNASSQRF
Sbjct: 186 DSSGGRILHRNVNASSQRF 201

[Close]

BLAST of HG10020293 vs. ExPASy TrEMBL
Match: A0A6J1CVB7 (uncharacterized protein LOC111015123 OS=Momordica charantia OX=3673 GN=LOC111015123 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.7e-91
Identity = 178/201 (88.56%), Postives = 188/201 (93.53%), Query Frame = 0


Query: 6   NTANFDNLLLQTLMGRLQIGPPNNNNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEEL 65
           NTANFDNLLLQTLMGRLQI PPNNNNPL SQSLE+LLFDAA+L DDDND+NKTQLAKEE 
Sbjct: 6   NTANFDNLLLQTLMGRLQIRPPNNNNPLLSQSLEDLLFDAANLSDDDNDDNKTQLAKEES 65

Query: 66  KLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHGHIMLFDEE 125
           KLE EIIRVI +GNTDSLKPNSGQAVTIGEHHICVGF EEKDSDYRVWEWHGHIMLFDEE
Sbjct: 66  KLEKEIIRVILTGNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIMLFDEE 125

Query: 126 NGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEE--EEEEDEKEEKVGNLGLRELID 185
           NGYSPEYIYGNYFERLQGK NRELNKR+EE+E+E+EE  EEE+DEK+EKVG LGLRELID
Sbjct: 126 NGYSPEYIYGNYFERLQGKVNRELNKRKEEQEQEEEEEGEEEDDEKDEKVGKLGLRELID 185

Query: 186 GGGSSAGRILHRNVNASSQRF 205
           GG SS GRILHRNVNASSQRF
Sbjct: 186 GGDSSGGRILHRNVNASSQRF 206

[Close]

BLAST of HG10020293 vs. ExPASy TrEMBL
Match: A0A6J1F855 (uncharacterized protein LOC111441746 OS=Cucurbita moschata OX=3662 GN=LOC111441746 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.3e-85
Identity = 169/199 (84.92%), Postives = 179/199 (89.95%), Query Frame = 0


Query: 6   NTANFDNLLLQTLMGRLQIGPPNNNNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEEL 65
           NTANFDNLLLQTLMGRLQI P +NNNPL +QSLE+LLFDAA+L DDDNDENKTQLAKEE 
Sbjct: 6   NTANFDNLLLQTLMGRLQIRPQSNNNPLLAQSLEDLLFDAANLSDDDNDENKTQLAKEES 65

Query: 66  KLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHGHIMLFDEE 125
            LE EIIRVI  GN DSLKPNSGQAVTIGEHHICVGF EEKDSDYRVWEWHGHIMLFDEE
Sbjct: 66  MLEKEIIRVILGGNIDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIMLFDEE 125

Query: 126 NGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGG 185
           NGYSPEYIYGNYFERLQGK NRELNK+   E  E+EEE+++DEKEE+VG LGLRELIDGG
Sbjct: 126 NGYSPEYIYGNYFERLQGKVNRELNKK---EAAEEEEEDDDDEKEEEVGKLGLRELIDGG 185

Query: 186 GSSAGRILHRNVNASSQRF 205
            SS GRILHRNVNASSQRF
Sbjct: 186 DSSGGRILHRNVNASSQRF 201

[Close]

BLAST of HG10020293 vs. ExPASy TrEMBL
Match: A0A6J1KW97 (uncharacterized protein LOC111498761 OS=Cucurbita maxima OX=3661 GN=LOC111498761 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.7e-85
Identity = 168/199 (84.42%), Postives = 178/199 (89.45%), Query Frame = 0


Query: 6   NTANFDNLLLQTLMGRLQIGPPNNNNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEEL 65
           NTANFDNLLLQTLMGRLQI P +NNNP+ +QSLE+LLFDAA+L DDDNDENKTQLAKEE 
Sbjct: 6   NTANFDNLLLQTLMGRLQIRPQSNNNPILAQSLEDLLFDAANLSDDDNDENKTQLAKEES 65

Query: 66  KLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHGHIMLFDEE 125
            LE EIIRVI  GNTDSLKPNSGQAVTIGEHHICVGF EEKDSDYRVWEWHGHIMLFDEE
Sbjct: 66  MLEKEIIRVILGGNTDSLKPNSGQAVTIGEHHICVGFHEEKDSDYRVWEWHGHIMLFDEE 125

Query: 126 NGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGG 185
           NGYSPEYIYGNYFERLQGK NRELNK+    E E+EEEE++DEKEE +  LGLRELIDGG
Sbjct: 126 NGYSPEYIYGNYFERLQGKVNRELNKK----EAEEEEEEDDDEKEENLSKLGLRELIDGG 185

Query: 186 GSSAGRILHRNVNASSQRF 205
            SS GRILHRNVNASSQRF
Sbjct: 186 DSSGGRILHRNVNASSQRF 200

[Close]

BLAST of HG10020293 vs. ExPASy TrEMBL
Match: A0A6J1J2Z9 (uncharacterized protein LOC111481390 OS=Cucurbita maxima OX=3661 GN=LOC111481390 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 7.8e-83
Identity = 169/205 (82.44%), Postives = 180/205 (87.80%), Query Frame = 0


Query: 1   MNFPYNTANFDNLLLQTLMGRLQIGPPN-NNNPLPSQSLEELLFDAADLFDDDNDENKTQ 60
           MN   NTANFDNLLLQTLMGRLQI  PN NNNPL SQSLE+LLFD A+L DDDNDENKTQ
Sbjct: 1   MNSFNNTANFDNLLLQTLMGRLQIRHPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQ 60

Query: 61  LAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHGHI 120
           LAKEE KLE EIIR+I +GN+DSLKPNSGQAVTIGEHHICVGF EEKDS YRVWEWHGHI
Sbjct: 61  LAKEESKLEKEIIRIILAGNSDSLKPNSGQAVTIGEHHICVGFHEEKDSGYRVWEWHGHI 120

Query: 121 MLFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLR 180
           MLFDEENGY+PEYIYGNYFE LQGKF REL+K +EEE +E+EEEE     EEKVG LGLR
Sbjct: 121 MLFDEENGYTPEYIYGNYFENLQGKFYRELHKPKEEEVKENEEEE-----EEKVGELGLR 180

Query: 181 ELIDGGGSSAGRILHRNVNASSQRF 205
           ELI+GG SSAGRILHRNVNASSQRF
Sbjct: 181 ELINGGDSSAGRILHRNVNASSQRF 200

[Close]

BLAST of HG10020293 vs. ExPASy TrEMBL
Match: A0A6J1F6Q3 (uncharacterized protein LOC111441374 OS=Cucurbita moschata OX=3662 GN=LOC111441374 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.7e-82
Identity = 169/205 (82.44%), Postives = 182/205 (88.78%), Query Frame = 0


Query: 1   MNFPYNTANFDNLLLQTLMGRLQIGPPN-NNNPLPSQSLEELLFDAADLFDDDNDENKTQ 60
           MN   NTANFDNLLLQTLMGRLQI PPN NNNPL SQSLE+LLFD A+L DDDNDENKTQ
Sbjct: 1   MNSFNNTANFDNLLLQTLMGRLQIRPPNSNNNPLISQSLEDLLFDVANLSDDDNDENKTQ 60

Query: 61  LAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHGHI 120
           LAKEE KLE EIIR+I +GN+DSLKPNSGQAVTIGEHHICVGF EE DS YRVWEWHGHI
Sbjct: 61  LAKEESKLEKEIIRIILAGNSDSLKPNSGQAVTIGEHHICVGFHEE-DSGYRVWEWHGHI 120

Query: 121 MLFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLR 180
           MLFDEENGY+PEYIYGNYFE L GK  REL+K +EEEE+E+EEEE+ +E EEKVG LGLR
Sbjct: 121 MLFDEENGYTPEYIYGNYFENLLGKVYRELHKLKEEEEKENEEEEDGNEDEEKVGELGLR 180

Query: 181 ELIDGGGSSAGRILHRNVNASSQRF 205
           ELI+GG SSAGRILHRNVNASSQRF
Sbjct: 181 ELINGGDSSAGRILHRNVNASSQRF 204

[Close]

BLAST of HG10020293 vs. TAIR 10
Match: AT3G53630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18692.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 231.1 bits (588), Expect = 8.3e-61
Identity = 126/197 (63.96%), Postives = 152/197 (77.16%), Query Frame = 0


Query: 8   ANFDNLLLQTLMGRLQIGPPNNNNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEELKL 67
           +N DNLL+QTL+GRLQI PPN++    SQSL++LLF + D   DD+ E +T L +EE +L
Sbjct: 8   SNIDNLLIQTLLGRLQIRPPNSH--FLSQSLDDLLFKSDDSDGDDDGEGQTSLDREEARL 67

Query: 68  ELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHGHIMLFDEENG 127
           E E+IRVI SG +DSLKPNSGQAVT+ EHHICVGF E+++SDYRVWEWHGHIMLFDEENG
Sbjct: 68  EKELIRVIVSGRSDSLKPNSGQAVTVNEHHICVGFHEDEESDYRVWEWHGHIMLFDEENG 127

Query: 128 YSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGS 187
           Y+PEYIYGNYFERL  K     N RR E+E++ E       KEE+V NLGLRELIDGG +
Sbjct: 128 YTPEYIYGNYFERLPVKLP---NNRRVEKEKKKE------MKEEEVENLGLRELIDGGDA 187

Query: 188 SAGRILHR-NVNASSQR 204
           + GRILHR N+N  S R
Sbjct: 188 APGRILHRNNINIGSSR 193

[Close]

BLAST of HG10020293 vs. TAIR 10
Match: AT4G18692.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53342.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 52.4 bits (124), Expect = 5.3e-07
Identity = 37/74 (50.00%), Postives = 48/74 (64.86%), Query Frame = 0


Query: 134 YGNYFERLQGKF--NRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGR 193
           +GNYFERL  K   NR +           E+E++++ KEE+V N GLRELIDGG ++ GR
Sbjct: 4   FGNYFERLPVKLPNNRHV-----------EKEKKKEVKEEEVENWGLRELIDGGDAAPGR 63

Query: 194 ILHR-NVNASSQRF 205
           ILHR N+N  S RF
Sbjct: 64  ILHRNNINIGSSRF 66

[Close]

BLAST of HG10020293 vs. TAIR 10
Match: AT3G53342.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18692.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 1.2e-06
Identity = 37/74 (50.00%), Postives = 47/74 (63.51%), Query Frame = 0


Query: 134 YGNYFERLQGKF--NRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGR 193
           +GNYFERL  K   NR +           E+E++++ KEE+V N GLRELIDGG  + GR
Sbjct: 4   FGNYFERLPVKLPNNRHV-----------EKEKKKEVKEEEVENWGLRELIDGGDVAPGR 63

Query: 194 ILHR-NVNASSQRF 205
           ILHR N+N  S RF
Sbjct: 64  ILHRNNINIGSSRF 66

[Close]

BLAST of HG10020293 vs. TAIR 10
Match: AT1G55710.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53342.1); Has 19 Blast hits to 19 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 6.4e-05
Identity = 37/72 (51.39%), Postives = 44/72 (61.11%), Query Frame = 0


Query: 134 YGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGRIL 193
           + NYFERL  K    L   R  E+E+ +E +EED     V N GLRELIDGG  + GRIL
Sbjct: 4   FRNYFERLPVK----LPNNRHVEKEKKKEVKEED-----VENWGLRELIDGGAVAPGRIL 63

Query: 194 HR-NVNASSQRF 205
           HR N+N  S RF
Sbjct: 64  HRNNINIGSSRF 66

The following BLAST results are available for this feature:

BLAST of HG10020293 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145740.1	5.5e-91	88.56	uncharacterized protein LOC111015123 [Momordica charantia]	[more]
XP_038905389.1	1.3e-87	85.44	AT-rich interactive domain-containing protein 4B isoform X2 [Benincasa hispida] ...	[more]
XP_038905388.1	6.3e-87	85.37	AT-rich interactive domain-containing protein 4B isoform X1 [Benincasa hispida]	[more]
KAG6596424.1	7.0e-86	83.82	hypothetical protein SDJN03_09604, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022934613.1	2.6e-85	84.92	uncharacterized protein LOC111441746 [Cucurbita moschata]	[more]

BLAST of HG10020293 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10020293 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CVB7	2.7e-91	88.56	uncharacterized protein LOC111015123 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1F855	1.3e-85	84.92	uncharacterized protein LOC111441746 OS=Cucurbita moschata OX=3662 GN=LOC1114417...	[more]
A0A6J1KW97	1.7e-85	84.42	uncharacterized protein LOC111498761 OS=Cucurbita maxima OX=3661 GN=LOC111498761...	[more]
A0A6J1J2Z9	7.8e-83	82.44	uncharacterized protein LOC111481390 OS=Cucurbita maxima OX=3661 GN=LOC111481390...	[more]
A0A6J1F6Q3	1.7e-82	82.44	uncharacterized protein LOC111441374 OS=Cucurbita moschata OX=3662 GN=LOC1114413...	[more]

BLAST of HG10020293 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53630.1	8.3e-61	63.96	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G18692.1	5.3e-07	50.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G53342.1	1.2e-06	50.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G55710.1	6.4e-05	51.39	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 138..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..170
None	No IPR available	PANTHER	PTHR35286	EXPRESSED PROTEIN	coord: 5..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10020293.1	HG10020293.1	mRNA