HG10020286 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020286
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like
Location	Chr04: 30581475 .. 30582871 (+)
RNA-Seq Expression	HG10020286
Synteny	HG10020286

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCTCAAGCATGGAAATTGAGCAAGCCTCCTCATCTTCCTCCTCCTCCTCCTTCCCCTCCTCGCCCGTTATTCAGCTCGGTGGTCGTGCTCTCGACCGCCACAACCCCATCATCTGTGATGGAAGAAGAAACAGCACTGCCCCCAACACTCTATTAACACCTCCTCGAGATTTTTCTCGACCGCCTTTTAGTCCCCAACCTCACCATCATCAACTCATAAAGAGCAAGAAAACCTCTTCAAAAGCCAACAGAAAAACCAAGACCAAAATCCCATCAGTGAAACAAGAAAATGAAGAGAAAGAAAGTCCTCACACTCTTCCATCTACTGATATTTTGAAGAAGAGCTCCTTCATTCCCGCTGATATTGTTACTAGGAGCTTTGCTAAGTTGAGTGATCTGGTCGCTCCTCCTCCTCCGCCCCCGGCTGGATCATCTAGATACCTACTTGAAAGTGATACACAATCACAATTCTTTGATGAGTTGCCGGAGATCGACCCTGTTTACGATATCGTCCCAGCTGATGGTTACAAAGAACTCAAAACTGAGGTAAATCAAGATGAGTCTACTTCTTCAACAACTCAAGCACCATTGTCTCAAGAGCCTAAACCAACTCCTACCAAACAGGTTTGCCACTTTGCTATACCTTTTAGTGATAAAGAAGTAAATATGACAGAACAGAAAACAAGCATGATAATGGAGGATATAAGAAACCAATGCAACTACTTTTAGCATTCTATAAGGTAAATGGCTGTCTTTTTCAAAGGAAATGTTTGCTTTTGGTTTTGGTAGCAGGTTGTGGTGTTGATGGTGTCACTGCACTGTAAAGGTTGTGAAGGGAAAGTTAGGAAACATCTTTCAAAAATGGAAGGTACGCTTCCGCTTCCTTAAAGAATGTGTTTGACAATGTCTTTGGCCCTTTTGATAACACTTGTAAAAAATGCCATCTCTTCAGACATGTTTTTGGACATTCATTCTTAATCTGTCTTTTTTTTCTTAGGATTTGGTGTTTTTACTAAAAAAAACAAATGAAATTATCCCTAGCTTGACATGATTGAGTGTCGTATCTGTTCGAATGTTTTATTACGATAAATAGAAATTATGATAAAAGTTTTTTTAAACCAAAATGCTAAGTATAAGAGATTTGACTTTAAATTTTGGAAGCAGGAGTCACATCCTTCAACATAGACTATGCAGCCAAAAAAGTGACAATAGAAGGAGATGTAACACCAGTAGGCGTTTTGGCAAGTGTATCAAAGCTGAAGCATGCGAAGTTTTGGACTTATCAACCGCCAACTCCGCCACCGCCAACTCCGCCGCCACAGTCACCGCCATCCACCTCGTTGACTGTAGCTTCAACGTCAGCCGCCACAGAAATGCCAGAAAACCAGCTTTGA

mRNA sequence

ATGAGCTCAAGCATGGAAATTGAGCAAGCCTCCTCATCTTCCTCCTCCTCCTCCTTCCCCTCCTCGCCCGTTATTCAGCTCGGTGGTCGTGCTCTCGACCGCCACAACCCCATCATCTGTGATGGAAGAAGAAACAGCACTGCCCCCAACACTCTATTAACACCTCCTCGAGATTTTTCTCGACCGCCTTTTAGTCCCCAACCTCACCATCATCAACTCATAAAGAGCAAGAAAACCTCTTCAAAAGCCAACAGAAAAACCAAGACCAAAATCCCATCAGTGAAACAAGAAAATGAAGAGAAAGAAAGTCCTCACACTCTTCCATCTACTGATATTTTGAAGAAGAGCTCCTTCATTCCCGCTGATATTGTTACTAGGAGCTTTGCTAAGTTGAGTGATCTGGTCGCTCCTCCTCCTCCGCCCCCGGCTGGATCATCTAGATACCTACTTGAAAGTGATACACAATCACAATTCTTTGATGAGTTGCCGGAGATCGACCCTGTTTACGATATCGTCCCAGCTGATGGTTACAAAGAACTCAAAACTGAGGTAAATCAAGATGAGTCTACTTCTTCAACAACTCAAGCACCATTGTCTCAAGAGCCTAAACCAACTCCTACCAAACAGGTTGTGGTGTTGATGGTGTCACTGCACTGTAAAGGTTGTGAAGGGAAAGTTAGGAAACATCTTTCAAAAATGGAAGGAGTCACATCCTTCAACATAGACTATGCAGCCAAAAAAGTGACAATAGAAGGAGATGTAACACCAGTAGGCGTTTTGGCAAGTGTATCAAAGCTGAAGCATGCGAAGTTTTGGACTTATCAACCGCCAACTCCGCCACCGCCAACTCCGCCGCCACAGTCACCGCCATCCACCTCGTTGACTGTAGCTTCAACGTCAGCCGCCACAGAAATGCCAGAAAACCAGCTTTGA

Coding sequence (CDS)

ATGAGCTCAAGCATGGAAATTGAGCAAGCCTCCTCATCTTCCTCCTCCTCCTCCTTCCCCTCCTCGCCCGTTATTCAGCTCGGTGGTCGTGCTCTCGACCGCCACAACCCCATCATCTGTGATGGAAGAAGAAACAGCACTGCCCCCAACACTCTATTAACACCTCCTCGAGATTTTTCTCGACCGCCTTTTAGTCCCCAACCTCACCATCATCAACTCATAAAGAGCAAGAAAACCTCTTCAAAAGCCAACAGAAAAACCAAGACCAAAATCCCATCAGTGAAACAAGAAAATGAAGAGAAAGAAAGTCCTCACACTCTTCCATCTACTGATATTTTGAAGAAGAGCTCCTTCATTCCCGCTGATATTGTTACTAGGAGCTTTGCTAAGTTGAGTGATCTGGTCGCTCCTCCTCCTCCGCCCCCGGCTGGATCATCTAGATACCTACTTGAAAGTGATACACAATCACAATTCTTTGATGAGTTGCCGGAGATCGACCCTGTTTACGATATCGTCCCAGCTGATGGTTACAAAGAACTCAAAACTGAGGTAAATCAAGATGAGTCTACTTCTTCAACAACTCAAGCACCATTGTCTCAAGAGCCTAAACCAACTCCTACCAAACAGGTTGTGGTGTTGATGGTGTCACTGCACTGTAAAGGTTGTGAAGGGAAAGTTAGGAAACATCTTTCAAAAATGGAAGGAGTCACATCCTTCAACATAGACTATGCAGCCAAAAAAGTGACAATAGAAGGAGATGTAACACCAGTAGGCGTTTTGGCAAGTGTATCAAAGCTGAAGCATGCGAAGTTTTGGACTTATCAACCGCCAACTCCGCCACCGCCAACTCCGCCGCCACAGTCACCGCCATCCACCTCGTTGACTGTAGCTTCAACGTCAGCCGCCACAGAAATGCCAGAAAACCAGCTTTGA

Protein sequence

MSSSMEIEQASSSSSSSSFPSSPVIQLGGRALDRHNPIICDGRRNSTAPNTLLTPPRDFSRPPFSPQPHHHQLIKSKKTSSKANRKTKTKIPSVKQENEEKESPHTLPSTDILKKSSFIPADIVTRSFAKLSDLVAPPPPPPAGSSRYLLESDTQSQFFDELPEIDPVYDIVPADGYKELKTEVNQDESTSSTTQAPLSQEPKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFNIDYAAKKVTIEGDVTPVGVLASVSKLKHAKFWTYQPPTPPPPTPPPQSPPSTSLTVASTSAATEMPENQL

Homology

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BLAST of HG10020286 vs. NCBI nr
Match: XP_038904004.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like [Benincasa hispida])

HSP 1 Score: 518.5 bits (1334), Expect = 4.1e-143
Identity = 285/310 (91.94%), Postives = 287/310 (92.58%), Query Frame = 0


Query: 1   MSSSMEIEQASSSSSSSSFPSSPVIQLGGRALDRHNPIICDGRRNSTAPNTLLTPPRDFS 60
           MS SMEIEQASSSSSSSSF SSPVIQLGGRALDRHNPIICDGRRN TAPNTLLTPPRDFS
Sbjct: 1   MSLSMEIEQASSSSSSSSFRSSPVIQLGGRALDRHNPIICDGRRNITAPNTLLTPPRDFS 60

Query: 61  RPPFSPQPHHHQLIKSKKTSSKANRKTKTKIPSVKQENEEKESPHTLPSTDILKKSSFIP 120
           RPPFSPQP HHQL KSKK SSKANRKTKTKIPSVKQENEEKES   LPSTDILKKSSFIP
Sbjct: 61  RPPFSPQP-HHQLTKSKKNSSKANRKTKTKIPSVKQENEEKESSLNLPSTDILKKSSFIP 120

Query: 121 ADIVTRSFAKLSDLVAPPPPPPAGSSRYLLESDTQSQFFDELPEIDPVYDIVPADGYKEL 180
            DIVTRSFAKLSDLVAPPPPP AGSSRYLLESDTQSQFFD LPEIDPVYDIV  D YKEL
Sbjct: 121 TDIVTRSFAKLSDLVAPPPPPLAGSSRYLLESDTQSQFFDGLPEIDPVYDIVSVDDYKEL 180

Query: 181 KTEVNQDESTSSTTQAPLSQEPKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFN 240
           KT+V+QDEST STTQ  LSQEPKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFN
Sbjct: 181 KTKVDQDEST-STTQPTLSQEPKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFN 240

Query: 241 IDYAAKKVTIEGDVTPVGVLASVSKLKHAKFWTYQPPTPPPPTPPPQSPPSTSLTVASTS 300
           IDYAAKKVTIEGDVTPVGVLASVSKLKHAKFWT QPPTPPP  PPPQSPPSTSLTVASTS
Sbjct: 241 IDYAAKKVTIEGDVTPVGVLASVSKLKHAKFWTSQPPTPPP--PPPQSPPSTSLTVASTS 300

Query: 301 AATEMPENQL 311
           A TEMP NQL
Sbjct: 301 ATTEMPGNQL 306

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BLAST of HG10020286 vs. NCBI nr
Match: XP_008442592.1 (PREDICTED: uncharacterized protein LOC103486416 [Cucumis melo])

HSP 1 Score: 511.5 bits (1316), Expect = 5.0e-141
Identity = 276/311 (88.75%), Postives = 281/311 (90.35%), Query Frame = 0


Query: 1   MSSSMEIEQASSSSSSSSFPSSPVIQLGGRALDRHNPIICDGRRNSTAPNTLLTPPRDFS 60
           M+SSMEIEQASSSSSSSS+PSSPVIQLGGRALDRHNPIICDGRRN TAPNTLLTPPR+FS
Sbjct: 1   MNSSMEIEQASSSSSSSSYPSSPVIQLGGRALDRHNPIICDGRRNITAPNTLLTPPREFS 60

Query: 61  RPPFSPQPHHHQLIKSKKTSSKANRKTKTKIPSVKQENEEKESPHTLPSTDILKKSSFIP 120
           RPPFSPQPHHHQL KSKKTSSK NRK K KIP VK ENEEKES   LPSTDILKKSSFIP
Sbjct: 61  RPPFSPQPHHHQLTKSKKTSSKVNRKIKNKIPFVKHENEEKESSDNLPSTDILKKSSFIP 120

Query: 121 ADIVTRSFAKLSDLVAPPPPPPAGSSRYLLESDTQSQFFDELPEIDPVYDIVPADGYKEL 180
            DIVTRSFAKLSDLVAPPPPP  GSSRYLLESDTQSQ+FD LPE+DPVYDI P D YKEL
Sbjct: 121 TDIVTRSFAKLSDLVAPPPPPLVGSSRYLLESDTQSQYFDGLPEVDPVYDINPVDDYKEL 180

Query: 181 KTEVNQDESTSSTTQAPLSQEPKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFN 240
           KTE NQDESTSSTTQ  LSQEPKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSF 
Sbjct: 181 KTEANQDESTSSTTQPTLSQEPKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFK 240

Query: 241 IDYAAKKVTIEGDVTPVGVLASVSKLKHAKFWTYQPPTPPPPTPPPQSPPSTSLTVASTS 300
           IDYAAKKVTIEGDVTPVGVLASVSKLKHAKFWT QPPTPP   PPPQSP STSLTVASTS
Sbjct: 241 IDYAAKKVTIEGDVTPVGVLASVSKLKHAKFWTSQPPTPP---PPPQSPVSTSLTVASTS 300

Query: 301 AAT-EMPENQL 311
           A T E PE QL
Sbjct: 301 ATTEETPEKQL 308

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BLAST of HG10020286 vs. NCBI nr
Match: XP_004137778.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 3 [Cucumis sativus] >KGN58901.1 hypothetical protein Csa_002400 [Cucumis sativus])

HSP 1 Score: 508.8 bits (1309), Expect = 3.2e-140
Identity = 278/312 (89.10%), Postives = 284/312 (91.03%), Query Frame = 0


Query: 1   MSSSMEIEQASSSSSSSSFPSSPVIQLGGRALDRHNPIICDGRRNSTAPNTLLTPPRDFS 60
           M+SSMEIEQASSSSSSSS+PSSPVIQLGGRALDRHNPIICDGRRN TAPNTLLTPPR+FS
Sbjct: 1   MNSSMEIEQASSSSSSSSYPSSPVIQLGGRALDRHNPIICDGRRNITAPNTLLTPPREFS 60

Query: 61  RPPFSPQPHHHQLIKSKKTSSKANRKTKTKIPSVKQENEEKESPHTLPSTDILKKSSFIP 120
           RPPFSPQPHHHQL KSKKTSSKANRKTK KIP VK E+EEKES  +LPSTD LKKSSFIP
Sbjct: 61  RPPFSPQPHHHQLTKSKKTSSKANRKTKNKIPFVKHEDEEKESSDSLPSTDFLKKSSFIP 120

Query: 121 ADIVTRSFAKLSDLVAPPPPPP-AGSSRYLLESDTQSQFFDELPEIDPVYDIVPADGYKE 180
            DIVTRSFAKLSDLVAPPPPPP  GSSRYLLESDTQSQFFDELPEIDPVYDI P D  KE
Sbjct: 121 TDIVTRSFAKLSDLVAPPPPPPLVGSSRYLLESDTQSQFFDELPEIDPVYDINPVDDNKE 180

Query: 181 LKTEVNQDESTSSTTQAPLSQEPKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSF 240
           LKTEVNQDESTSSTTQ  LS+EPKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSF
Sbjct: 181 LKTEVNQDESTSSTTQPTLSEEPKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSF 240

Query: 241 NIDYAAKKVTIEGDVTPVGVLASVSKLKHAKFWTYQPPTPPPPTPPPQSPPSTSLTVAST 300
            IDYAAKKVTIEGDVTPVGVLASVSKLKHAKFWT QPPTP    PPPQSP STSLTVAST
Sbjct: 241 KIDYAAKKVTIEGDVTPVGVLASVSKLKHAKFWTSQPPTP----PPPQSPVSTSLTVAST 300

Query: 301 SAAT-EMPENQL 311
           SA T EM E QL
Sbjct: 301 SATTEEMLEKQL 308

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BLAST of HG10020286 vs. NCBI nr
Match: XP_022939936.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like isoform X1 [Cucurbita moschata] >XP_022939945.1 protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 499.6 bits (1285), Expect = 2.0e-137
Identity = 270/310 (87.10%), Postives = 282/310 (90.97%), Query Frame = 0


Query: 3   SSMEIEQASSSSSSSSFPSSPVIQLGGRALDRHNPIICDGRRNSTAPNTLLTPPRDFSRP 62
           SSMEIE+A  SSSSSSFPSSP IQLGGRALDRHNPIICDGRRNSTAPN+LLTPPRDF+RP
Sbjct: 18  SSMEIEEA--SSSSSSFPSSPAIQLGGRALDRHNPIICDGRRNSTAPNSLLTPPRDFTRP 77

Query: 63  PFSPQPHHHQLIKSKKTSSKANRKTKTKIPSVKQENEEKESPHTLPSTDILKKSSFIPAD 122
           PFSPQP HHQL KSKKTSSK NR+TK KIPSVKQENEEKE  HTLPSTD LKKSSFIP D
Sbjct: 78  PFSPQP-HHQLTKSKKTSSKGNRRTKNKIPSVKQENEEKEDCHTLPSTDTLKKSSFIPTD 137

Query: 123 IVTRSFAKLSDLVAPPPPPPAGSSRYLLESDTQSQFFDELPEIDPVYDIVPADGYKELKT 182
           IVTRSFAKL+DL+APP PPPAGSSRYLL SD+QS+FFD LPE DPVYDIVPAD Y+ELKT
Sbjct: 138 IVTRSFAKLNDLIAPPAPPPAGSSRYLLGSDSQSEFFDRLPETDPVYDIVPADDYQELKT 197

Query: 183 EVNQDESTSSTTQAPLSQEPKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFNID 242
           +VNQD ST STTQ  LSQ+PKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFNID
Sbjct: 198 DVNQDGST-STTQETLSQQPKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFNID 257

Query: 243 YAAKKVTIEGDVTPVGVLASVSKLKHAKFWTYQPPTPPPPTP--PPQSPPSTSLTVASTS 302
            AAKKVTIEGDVTPVGVLASVSKLKHAKFWT Q PTPPPP P  PPQ PPST+LTVASTS
Sbjct: 258 SAAKKVTIEGDVTPVGVLASVSKLKHAKFWTSQQPTPPPPPPTTPPQPPPSTALTVASTS 317

Query: 303 AATEMPENQL 311
           A TEMPENQL
Sbjct: 318 ATTEMPENQL 323

[Close]

BLAST of HG10020286 vs. NCBI nr
Match: XP_023539840.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 498.8 bits (1283), Expect = 3.3e-137
Identity = 270/310 (87.10%), Postives = 282/310 (90.97%), Query Frame = 0


Query: 3   SSMEIEQASSSSSSSSFPSSPVIQLGGRALDRHNPIICDGRRNSTAPNTLLTPPRDFSRP 62
           SSMEIE+A  SSSSSSFPSSP IQLGGRALDRHNPIICDGRRNSTAPN+LLTPPRDF+RP
Sbjct: 18  SSMEIEEA--SSSSSSFPSSPAIQLGGRALDRHNPIICDGRRNSTAPNSLLTPPRDFTRP 77

Query: 63  PFSPQPHHHQLIKSKKTSSKANRKTKTKIPSVKQENEEKESPHTLPSTDILKKSSFIPAD 122
           PFSPQP HHQL KSKKTSSK NR+TK KIPSVKQENEEKE  HTLPSTD LKKSSFIP D
Sbjct: 78  PFSPQP-HHQLTKSKKTSSKGNRRTKNKIPSVKQENEEKEDCHTLPSTDTLKKSSFIPTD 137

Query: 123 IVTRSFAKLSDLVAPPPPPPAGSSRYLLESDTQSQFFDELPEIDPVYDIVPADGYKELKT 182
           IVTRSFAKL+DL+APP PPPAGSSRYLL SD+QS+FFD LPE DPVYDIVPAD Y+ELKT
Sbjct: 138 IVTRSFAKLNDLIAPPAPPPAGSSRYLLGSDSQSEFFDRLPETDPVYDIVPADDYQELKT 197

Query: 183 EVNQDESTSSTTQAPLSQEPKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFNID 242
           +VNQD ST STTQ  LSQ+PKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFNID
Sbjct: 198 DVNQDGST-STTQETLSQQPKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFNID 257

Query: 243 YAAKKVTIEGDVTPVGVLASVSKLKHAKFWTYQPPTPPPP--TPPPQSPPSTSLTVASTS 302
            AAKKVTIEGDVTPVGVLASVSKLKHAKFWT Q PTPPPP  T PPQ PPST+LTVASTS
Sbjct: 258 SAAKKVTIEGDVTPVGVLASVSKLKHAKFWTSQQPTPPPPPLTTPPQPPPSTALTVASTS 317

Query: 303 AATEMPENQL 311
           A TEMPENQL
Sbjct: 318 ATTEMPENQL 323

[Close]

BLAST of HG10020286 vs. ExPASy Swiss-Prot
Match: Q8LDS4 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAKR1 PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 6.3e-30
Identity = 111/312 (35.58%), Postives = 156/312 (50.00%), Query Frame = 0


Query: 7   IEQASSSSSSSSFPSSPVIQLGGRALDRHNPIICDGRRNSTAPNTLLTPPRDFSRPPFSP 66
           ++Q S  SSS    SS  I+LGGRA+DRHNPII DGRR       L  PP     P  S 
Sbjct: 16  MDQTSQPSSS----SSATIRLGGRAIDRHNPIIRDGRR-------LTPPPSPNLNPSSSS 75

Query: 67  QPHHHQLIKSKKTSSKANRKTKTKIPSVKQENEEKESPHTLPSTDILKKSS--FIPADIV 126
              +H  + ++     + +K   K  S K +++  +SP +  S+D  + SS   +   + 
Sbjct: 76  SSTYHTPLMTRLGLESSEQKRLAKRKSKKGDSDVGKSPVSCFSSDTPQGSSRYLLSNPVF 135

Query: 127 TRSFAKLSDLVAPPPPPP----------------AGSSRYLLESDT-----QSQFFDELP 186
              F     +  P   P                   +S+YL  S +     Q  FF+   
Sbjct: 136 FDGFVDSDPIPIPIDEPEITKADDLNNFHEDRLIINASKYLSTSASFLEKKQPDFFEGFL 195

Query: 187 EIDPVYDIVPADGYKELKTEVNQDESTSSTTQAPLSQ---------EPKPTP-------- 246
           + +PV  + P + + E  T+ +   S SS     +S           P P+P        
Sbjct: 196 DYEPV--LSPDNPFSE-PTKASPTASLSSLEDKDVSSPDFKFSPPPPPPPSPPQSSPPSP 255

Query: 247 ------TKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFNIDYAAKKVTIEGDVTPVGVL 273
                 + QVVVL VSLHCKGC GKV+KHLSK++GVTS+NID+AAKKVT+ GDVTP+ VL
Sbjct: 256 PEKNSSSDQVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVL 313

[Close]

BLAST of HG10020286 vs. ExPASy Swiss-Prot
Match: Q8RXH8 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=NAKR3 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 9.1e-29
Identity = 102/281 (36.30%), Postives = 153/281 (54.45%), Query Frame = 0


Query: 13  SSSSSSFPSSPVIQLGGRALDRHNPIICDGRRNSTAPNTLLTPPRDFSRPPFSPQPHHHQ 72
           +S +S+  ++    +  RA+DRHNPII DGRR+ TAP    +   D+  P       + Q
Sbjct: 9   ASQASTATANGERTVTARAIDRHNPIIKDGRRSFTAP---CSSGDDYVAP-------YRQ 68

Query: 73  LIKSKKTSSKANRKTKTKIPSVKQENEEKESPHTLPSTDILKKSSFIPADIVTRSFAKLS 132
           L K  +  S +      ++   ++ N          S  ++K  S+    +  +SF    
Sbjct: 69  LSKITRVPSSSGDGKSVQVDKGRRSN----------SGSLMKLISY-DVSLARKSF---G 128

Query: 133 DLVAPPPPPPAGSSRYLLESDTQSQFFDELPEIDPVYDIVPADGYKELKTEVNQDESTSS 192
            +VA P  PP GS+RYLL SD  S              +  + G   + TE ++  +   
Sbjct: 129 CVVATPKTPP-GSTRYLLGSDPVS--------------LAGSTGQDTVATEESEASAPKR 188

Query: 193 TTQAPLSQEPKP--TPTKQVVVLMVSL--HCKGCEGKVRKHLSKMEGVTSFNIDYAAKKV 252
            +  P+ ++ K   + + QVVVL VSL  HC+GC+GKV+KHLSKM+GVTSFNID+A+KKV
Sbjct: 189 GSSGPVEEKKKSSGSGSDQVVVLRVSLHCHCRGCQGKVKKHLSKMQGVTSFNIDFASKKV 245

Query: 253 TIEGDVTPVGVLASVSKLKHAKFWTYQPPTPPPPTPPPQSP 290
           T+ GD+TP+ VL  +SK+K+A+FW     TPPPP+ P  +P
Sbjct: 249 TVTGDITPLEVLGCLSKVKNAQFW-----TPPPPSIPRANP 245

[Close]

BLAST of HG10020286 vs. ExPASy Swiss-Prot
Match: Q58FZ0 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAKR2 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.2e-25
Identity = 97/269 (36.06%), Postives = 132/269 (49.07%), Query Frame = 0


Query: 29  GRALDRHNPIICDGRRNSTAPNTLLTPPRDFSRPPFSPQPHHHQLIKSKKTSSKANRKTK 88
           GRA+DRHNPII DGRR+            DF + P S +      + +KK      R++ 
Sbjct: 36  GRAIDRHNPIIKDGRRSFA---------DDFIKLPTSAEDGE---MSNKKLEIYKGRRSI 95

Query: 89  TKIPSVKQENEEKESPHTLPSTDILKKSSFIPADIVTRSFAKLSDLVAPPPPPPAGSSRY 148
           T                       L K       +  +SF+ ++         P GS+RY
Sbjct: 96  T--------GRRSTGGGGGGGAAALLKLITNDIGLARKSFSCVARPACDLIKTPVGSTRY 155

Query: 149 LLESDTQSQFFDELPEIDPVYDIVPADGYKELKTEVNQDESTSSTTQAPLSQEPKPTPTK 208
           LL SD  S                       +   V+QD + +   +AP  ++   T  K
Sbjct: 156 LLGSDPDS-----------------------ITGSVDQDPAKTVEAEAPAGEDKTLTEKK 215

Query: 209 --------QVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFNIDYAAKKVTIEGDVTPVGVL 268
                   QVVVL VSLHC+GCEGKVRKHL++M+GVTSFNID+AAKKVT+ GD+TP+ +L
Sbjct: 216 TTCGDTDQQVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGDITPLEIL 259

Query: 269 ASVSKLKHAKFWTYQPPTPPPPTPPPQSP 290
            S+SK+K+A+FWT   PT P P    Q+P
Sbjct: 276 DSISKVKNAQFWT--NPTIPKPNVETQNP 259

[Close]

BLAST of HG10020286 vs. ExPASy Swiss-Prot
Match: Q94BT9 (Copper transport protein ATX1 OS=Arabidopsis thaliana OX=3702 GN=ATX1 PE=1 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 1.2e-09
Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 0


Query: 209 QVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFNIDYAAKKVTIEGDVTPVGVLASVSKL-K 268
           Q VVL V++ C+GC G V++ L KMEGV SF++D   +KVT++G+V P  VL +V+K  K
Sbjct: 3   QTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKTGK 62

Query: 269 HAKFWTYQPPT 279
              FW  +  T
Sbjct: 63  KTAFWEAEGET 73

[Close]

BLAST of HG10020286 vs. ExPASy Swiss-Prot
Match: O82089 (Copper transport protein CCH OS=Arabidopsis thaliana OX=3702 GN=CCH PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 6.8e-08
Identity = 38/97 (39.18%), Postives = 53/97 (54.64%), Query Frame = 0


Query: 209 QVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFNIDYAAKKVTIEGDVTPVGVLASVSKL-K 268
           Q VVL V + C+GC G V + L KMEGV SF+ID   +KVT++G+V P  V  +VSK  K
Sbjct: 3   QTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKTGK 62

Query: 269 HAKFWTYQPPTPPPPTPPPQSPPSTSLTVASTSAATE 305
              +W  +    P     P+     ++T   T A T+
Sbjct: 63  KTSYWPVEAEAEPKAEADPK---VETVTETKTEAETK 96

[Close]

BLAST of HG10020286 vs. ExPASy TrEMBL
Match: A0A1S3B6T8 (uncharacterized protein LOC103486416 OS=Cucumis melo OX=3656 GN=LOC103486416 PE=4 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 2.4e-141
Identity = 276/311 (88.75%), Postives = 281/311 (90.35%), Query Frame = 0


Query: 1   MSSSMEIEQASSSSSSSSFPSSPVIQLGGRALDRHNPIICDGRRNSTAPNTLLTPPRDFS 60
           M+SSMEIEQASSSSSSSS+PSSPVIQLGGRALDRHNPIICDGRRN TAPNTLLTPPR+FS
Sbjct: 1   MNSSMEIEQASSSSSSSSYPSSPVIQLGGRALDRHNPIICDGRRNITAPNTLLTPPREFS 60

Query: 61  RPPFSPQPHHHQLIKSKKTSSKANRKTKTKIPSVKQENEEKESPHTLPSTDILKKSSFIP 120
           RPPFSPQPHHHQL KSKKTSSK NRK K KIP VK ENEEKES   LPSTDILKKSSFIP
Sbjct: 61  RPPFSPQPHHHQLTKSKKTSSKVNRKIKNKIPFVKHENEEKESSDNLPSTDILKKSSFIP 120

Query: 121 ADIVTRSFAKLSDLVAPPPPPPAGSSRYLLESDTQSQFFDELPEIDPVYDIVPADGYKEL 180
            DIVTRSFAKLSDLVAPPPPP  GSSRYLLESDTQSQ+FD LPE+DPVYDI P D YKEL
Sbjct: 121 TDIVTRSFAKLSDLVAPPPPPLVGSSRYLLESDTQSQYFDGLPEVDPVYDINPVDDYKEL 180

Query: 181 KTEVNQDESTSSTTQAPLSQEPKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFN 240
           KTE NQDESTSSTTQ  LSQEPKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSF 
Sbjct: 181 KTEANQDESTSSTTQPTLSQEPKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFK 240

Query: 241 IDYAAKKVTIEGDVTPVGVLASVSKLKHAKFWTYQPPTPPPPTPPPQSPPSTSLTVASTS 300
           IDYAAKKVTIEGDVTPVGVLASVSKLKHAKFWT QPPTPP   PPPQSP STSLTVASTS
Sbjct: 241 IDYAAKKVTIEGDVTPVGVLASVSKLKHAKFWTSQPPTPP---PPPQSPVSTSLTVASTS 300

Query: 301 AAT-EMPENQL 311
           A T E PE QL
Sbjct: 301 ATTEETPEKQL 308

[Close]

BLAST of HG10020286 vs. ExPASy TrEMBL
Match: A0A0A0LFM6 (HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G735010 PE=4 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 1.6e-140
Identity = 278/312 (89.10%), Postives = 284/312 (91.03%), Query Frame = 0


Query: 1   MSSSMEIEQASSSSSSSSFPSSPVIQLGGRALDRHNPIICDGRRNSTAPNTLLTPPRDFS 60
           M+SSMEIEQASSSSSSSS+PSSPVIQLGGRALDRHNPIICDGRRN TAPNTLLTPPR+FS
Sbjct: 1   MNSSMEIEQASSSSSSSSYPSSPVIQLGGRALDRHNPIICDGRRNITAPNTLLTPPREFS 60

Query: 61  RPPFSPQPHHHQLIKSKKTSSKANRKTKTKIPSVKQENEEKESPHTLPSTDILKKSSFIP 120
           RPPFSPQPHHHQL KSKKTSSKANRKTK KIP VK E+EEKES  +LPSTD LKKSSFIP
Sbjct: 61  RPPFSPQPHHHQLTKSKKTSSKANRKTKNKIPFVKHEDEEKESSDSLPSTDFLKKSSFIP 120

Query: 121 ADIVTRSFAKLSDLVAPPPPPP-AGSSRYLLESDTQSQFFDELPEIDPVYDIVPADGYKE 180
            DIVTRSFAKLSDLVAPPPPPP  GSSRYLLESDTQSQFFDELPEIDPVYDI P D  KE
Sbjct: 121 TDIVTRSFAKLSDLVAPPPPPPLVGSSRYLLESDTQSQFFDELPEIDPVYDINPVDDNKE 180

Query: 181 LKTEVNQDESTSSTTQAPLSQEPKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSF 240
           LKTEVNQDESTSSTTQ  LS+EPKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSF
Sbjct: 181 LKTEVNQDESTSSTTQPTLSEEPKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSF 240

Query: 241 NIDYAAKKVTIEGDVTPVGVLASVSKLKHAKFWTYQPPTPPPPTPPPQSPPSTSLTVAST 300
            IDYAAKKVTIEGDVTPVGVLASVSKLKHAKFWT QPPTP    PPPQSP STSLTVAST
Sbjct: 241 KIDYAAKKVTIEGDVTPVGVLASVSKLKHAKFWTSQPPTP----PPPQSPVSTSLTVAST 300

Query: 301 SAAT-EMPENQL 311
           SA T EM E QL
Sbjct: 301 SATTEEMLEKQL 308

[Close]

BLAST of HG10020286 vs. ExPASy TrEMBL
Match: A0A6J1FP71 (protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445652 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 9.5e-138
Identity = 270/310 (87.10%), Postives = 282/310 (90.97%), Query Frame = 0


Query: 3   SSMEIEQASSSSSSSSFPSSPVIQLGGRALDRHNPIICDGRRNSTAPNTLLTPPRDFSRP 62
           SSMEIE+A  SSSSSSFPSSP IQLGGRALDRHNPIICDGRRNSTAPN+LLTPPRDF+RP
Sbjct: 18  SSMEIEEA--SSSSSSFPSSPAIQLGGRALDRHNPIICDGRRNSTAPNSLLTPPRDFTRP 77

Query: 63  PFSPQPHHHQLIKSKKTSSKANRKTKTKIPSVKQENEEKESPHTLPSTDILKKSSFIPAD 122
           PFSPQP HHQL KSKKTSSK NR+TK KIPSVKQENEEKE  HTLPSTD LKKSSFIP D
Sbjct: 78  PFSPQP-HHQLTKSKKTSSKGNRRTKNKIPSVKQENEEKEDCHTLPSTDTLKKSSFIPTD 137

Query: 123 IVTRSFAKLSDLVAPPPPPPAGSSRYLLESDTQSQFFDELPEIDPVYDIVPADGYKELKT 182
           IVTRSFAKL+DL+APP PPPAGSSRYLL SD+QS+FFD LPE DPVYDIVPAD Y+ELKT
Sbjct: 138 IVTRSFAKLNDLIAPPAPPPAGSSRYLLGSDSQSEFFDRLPETDPVYDIVPADDYQELKT 197

Query: 183 EVNQDESTSSTTQAPLSQEPKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFNID 242
           +VNQD ST STTQ  LSQ+PKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFNID
Sbjct: 198 DVNQDGST-STTQETLSQQPKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFNID 257

Query: 243 YAAKKVTIEGDVTPVGVLASVSKLKHAKFWTYQPPTPPPPTP--PPQSPPSTSLTVASTS 302
            AAKKVTIEGDVTPVGVLASVSKLKHAKFWT Q PTPPPP P  PPQ PPST+LTVASTS
Sbjct: 258 SAAKKVTIEGDVTPVGVLASVSKLKHAKFWTSQQPTPPPPPPTTPPQPPPSTALTVASTS 317

Query: 303 AATEMPENQL 311
           A TEMPENQL
Sbjct: 318 ATTEMPENQL 323

[Close]

BLAST of HG10020286 vs. ExPASy TrEMBL
Match: A0A6J1KUA4 (protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like OS=Cucurbita maxima OX=3661 GN=LOC111498301 PE=4 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 3.0e-136
Identity = 267/310 (86.13%), Postives = 280/310 (90.32%), Query Frame = 0


Query: 3   SSMEIEQASSSSSSSSFPSSPVIQLGGRALDRHNPIICDGRRNSTAPNTLLTPPRDFSRP 62
           SSMEIE+   SSSSSSFPSSP IQLGGRALDRHNPIICDGRRNSTAPN+LLTPPRDF+RP
Sbjct: 18  SSMEIEEV--SSSSSSFPSSPAIQLGGRALDRHNPIICDGRRNSTAPNSLLTPPRDFTRP 77

Query: 63  PFSPQPHHHQLIKSKKTSSKANRKTKTKIPSVKQENEEKESPHTLPSTDILKKSSFIPAD 122
           PFSPQP HHQL KSKKTSSK NR+TKTKIPSVKQENEE+E  HTLPSTD LKKSSFIP D
Sbjct: 78  PFSPQP-HHQLTKSKKTSSKGNRRTKTKIPSVKQENEEREDCHTLPSTDTLKKSSFIPTD 137

Query: 123 IVTRSFAKLSDLVAPPPPPPAGSSRYLLESDTQSQFFDELPEIDPVYDIVPADGYKELKT 182
           IVTRSFAKL+DL+APP PPPAGSSRYLL SD+QS+FFD LPE DPVYDIVPAD Y+ELKT
Sbjct: 138 IVTRSFAKLNDLIAPPAPPPAGSSRYLLGSDSQSEFFDRLPENDPVYDIVPADDYQELKT 197

Query: 183 EVNQDESTSSTTQAPLSQEPKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFNID 242
           +VNQD ST STTQ  LSQ+PKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFNID
Sbjct: 198 DVNQDGST-STTQETLSQQPKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFNID 257

Query: 243 YAAKKVTIEGDVTPVGVLASVSKLKHAKFWTYQPPTPPPPTP--PPQSPPSTSLTVASTS 302
            AAKKVTIEGDVTPVGVLASVSKLKHAKFWT Q PTPPPP P  PP  PPST+LT ASTS
Sbjct: 258 SAAKKVTIEGDVTPVGVLASVSKLKHAKFWTSQQPTPPPPPPTTPPHPPPSTALTAASTS 317

Query: 303 AATEMPENQL 311
           A TEMPENQL
Sbjct: 318 ATTEMPENQL 323

[Close]

BLAST of HG10020286 vs. ExPASy TrEMBL
Match: A0A6J1CWM7 (protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014976 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.2e-132
Identity = 265/310 (85.48%), Postives = 278/310 (89.68%), Query Frame = 0


Query: 3   SSMEIEQASSSSSSSSFPSSPVIQLGGRALDRHNPIICDGRRNSTAPNTLLTPPRDFSRP 62
           S MEIEQA SSSSSSSFP SP I+LGGRALDRHNPIICD RRNSTA NTLLTPPRDFSRP
Sbjct: 18  SRMEIEQA-SSSSSSSFPPSPSIELGGRALDRHNPIICDARRNSTATNTLLTPPRDFSRP 77

Query: 63  PFSPQPHHHQLIKSKKTSSKANRKTKTKIPSVKQENEEKESPHTLPSTDILKKSSFIPAD 122
           P SP P H+QL KSKK+SSK NRKT TKIPSVKQENE+KE      S+DILKKSSFIP D
Sbjct: 78  PISPHP-HYQLTKSKKSSSKGNRKTNTKIPSVKQENEKKE------SSDILKKSSFIPTD 137

Query: 123 IVTRSFAKLSDLVAPPPPPPAGSSRYLLES--DTQSQFFDELPEIDPVYDIVPADGYKEL 182
           IVTRSFAKLSDLVAPPPPPPAGSSRYLLES  DT SQFF+ LPEIDPVYDIVP + YK++
Sbjct: 138 IVTRSFAKLSDLVAPPPPPPAGSSRYLLESDTDTHSQFFNRLPEIDPVYDIVPVEEYKDV 197

Query: 183 KTEVNQDESTSSTTQAPLSQEPKPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFN 242
           KT+V QD+STSSTTQAPLSQ+P PTPTKQVVVLMVSLHCKGCEGKVRKHLSKM+GVTSFN
Sbjct: 198 KTDVVQDQSTSSTTQAPLSQQPNPTPTKQVVVLMVSLHCKGCEGKVRKHLSKMQGVTSFN 257

Query: 243 IDYAAKKVTIEGDVTPVGVLASVSKLKHAKFWTYQPPTPPPPTPPPQSPPSTSLTVASTS 302
           IDYAAKKVTIEGDVTPVGVLASVSKLKHAKFWT QPPTPPP  PPPQSPPSTSLTVAS S
Sbjct: 258 IDYAAKKVTIEGDVTPVGVLASVSKLKHAKFWTSQPPTPPP--PPPQSPPSTSLTVASAS 317

Query: 303 AATEMPENQL 311
           A TEMPENQL
Sbjct: 318 ATTEMPENQL 317

[Close]

BLAST of HG10020286 vs. TAIR 10
Match: AT5G02600.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 132.9 bits (333), Expect = 4.5e-31
Identity = 111/312 (35.58%), Postives = 156/312 (50.00%), Query Frame = 0


Query: 7   IEQASSSSSSSSFPSSPVIQLGGRALDRHNPIICDGRRNSTAPNTLLTPPRDFSRPPFSP 66
           ++Q S  SSS    SS  I+LGGRA+DRHNPII DGRR       L  PP     P  S 
Sbjct: 16  MDQTSQPSSS----SSATIRLGGRAIDRHNPIIRDGRR-------LTPPPSPNLNPSSSS 75

Query: 67  QPHHHQLIKSKKTSSKANRKTKTKIPSVKQENEEKESPHTLPSTDILKKSS--FIPADIV 126
              +H  + ++     + +K   K  S K +++  +SP +  S+D  + SS   +   + 
Sbjct: 76  SSTYHTPLMTRLGLESSEQKRLAKRKSKKGDSDVGKSPVSCFSSDTPQGSSRYLLSNPVF 135

Query: 127 TRSFAKLSDLVAPPPPPP----------------AGSSRYLLESDT-----QSQFFDELP 186
              F     +  P   P                   +S+YL  S +     Q  FF+   
Sbjct: 136 FDGFVDSDPIPIPIDEPEITKADDLNNFHEDRLIINASKYLSTSASFLEKKQPDFFEGFL 195

Query: 187 EIDPVYDIVPADGYKELKTEVNQDESTSSTTQAPLSQ---------EPKPTP-------- 246
           + +PV  + P + + E  T+ +   S SS     +S           P P+P        
Sbjct: 196 DYEPV--LSPDNPFSE-PTKASPTASLSSLEDKDVSSPDFKFSPPPPPPPSPPQSSPPSP 255

Query: 247 ------TKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFNIDYAAKKVTIEGDVTPVGVL 273
                 + QVVVL VSLHCKGC GKV+KHLSK++GVTS+NID+AAKKVT+ GDVTP+ VL
Sbjct: 256 PEKNSSSDQVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVL 313

[Close]

BLAST of HG10020286 vs. TAIR 10
Match: AT5G02600.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 132.9 bits (333), Expect = 4.5e-31
Identity = 111/312 (35.58%), Postives = 156/312 (50.00%), Query Frame = 0


Query: 7   IEQASSSSSSSSFPSSPVIQLGGRALDRHNPIICDGRRNSTAPNTLLTPPRDFSRPPFSP 66
           ++Q S  SSS    SS  I+LGGRA+DRHNPII DGRR       L  PP     P  S 
Sbjct: 16  MDQTSQPSSS----SSATIRLGGRAIDRHNPIIRDGRR-------LTPPPSPNLNPSSSS 75

Query: 67  QPHHHQLIKSKKTSSKANRKTKTKIPSVKQENEEKESPHTLPSTDILKKSS--FIPADIV 126
              +H  + ++     + +K   K  S K +++  +SP +  S+D  + SS   +   + 
Sbjct: 76  SSTYHTPLMTRLGLESSEQKRLAKRKSKKGDSDVGKSPVSCFSSDTPQGSSRYLLSNPVF 135

Query: 127 TRSFAKLSDLVAPPPPPP----------------AGSSRYLLESDT-----QSQFFDELP 186
              F     +  P   P                   +S+YL  S +     Q  FF+   
Sbjct: 136 FDGFVDSDPIPIPIDEPEITKADDLNNFHEDRLIINASKYLSTSASFLEKKQPDFFEGFL 195

Query: 187 EIDPVYDIVPADGYKELKTEVNQDESTSSTTQAPLSQ---------EPKPTP-------- 246
           + +PV  + P + + E  T+ +   S SS     +S           P P+P        
Sbjct: 196 DYEPV--LSPDNPFSE-PTKASPTASLSSLEDKDVSSPDFKFSPPPPPPPSPPQSSPPSP 255

Query: 247 ------TKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFNIDYAAKKVTIEGDVTPVGVL 273
                 + QVVVL VSLHCKGC GKV+KHLSK++GVTS+NID+AAKKVT+ GDVTP+ VL
Sbjct: 256 PEKNSSSDQVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVL 313

[Close]

BLAST of HG10020286 vs. TAIR 10
Match: AT3G53530.1 (Chloroplast-targeted copper chaperone protein )

HSP 1 Score: 129.0 bits (323), Expect = 6.5e-30
Identity = 102/281 (36.30%), Postives = 153/281 (54.45%), Query Frame = 0


Query: 13  SSSSSSFPSSPVIQLGGRALDRHNPIICDGRRNSTAPNTLLTPPRDFSRPPFSPQPHHHQ 72
           +S +S+  ++    +  RA+DRHNPII DGRR+ TAP    +   D+  P       + Q
Sbjct: 9   ASQASTATANGERTVTARAIDRHNPIIKDGRRSFTAP---CSSGDDYVAP-------YRQ 68

Query: 73  LIKSKKTSSKANRKTKTKIPSVKQENEEKESPHTLPSTDILKKSSFIPADIVTRSFAKLS 132
           L K  +  S +      ++   ++ N          S  ++K  S+    +  +SF    
Sbjct: 69  LSKITRVPSSSGDGKSVQVDKGRRSN----------SGSLMKLISY-DVSLARKSF---G 128

Query: 133 DLVAPPPPPPAGSSRYLLESDTQSQFFDELPEIDPVYDIVPADGYKELKTEVNQDESTSS 192
            +VA P  PP GS+RYLL SD  S              +  + G   + TE ++  +   
Sbjct: 129 CVVATPKTPP-GSTRYLLGSDPVS--------------LAGSTGQDTVATEESEASAPKR 188

Query: 193 TTQAPLSQEPKP--TPTKQVVVLMVSL--HCKGCEGKVRKHLSKMEGVTSFNIDYAAKKV 252
            +  P+ ++ K   + + QVVVL VSL  HC+GC+GKV+KHLSKM+GVTSFNID+A+KKV
Sbjct: 189 GSSGPVEEKKKSSGSGSDQVVVLRVSLHCHCRGCQGKVKKHLSKMQGVTSFNIDFASKKV 245

Query: 253 TIEGDVTPVGVLASVSKLKHAKFWTYQPPTPPPPTPPPQSP 290
           T+ GD+TP+ VL  +SK+K+A+FW     TPPPP+ P  +P
Sbjct: 249 TVTGDITPLEVLGCLSKVKNAQFW-----TPPPPSIPRANP 245

[Close]

BLAST of HG10020286 vs. TAIR 10
Match: AT3G53530.2 (Chloroplast-targeted copper chaperone protein )

HSP 1 Score: 124.4 bits (311), Expect = 1.6e-28
Identity = 102/282 (36.17%), Postives = 153/282 (54.26%), Query Frame = 0


Query: 13  SSSSSSFPSSPVIQLGGRALDRHNPIICDGRRNSTAPNTLLTPPRDFSRPPFSPQPHHHQ 72
           +S +S+  ++    +  RA+DRHNPII DGRR+ TAP    +   D+  P       + Q
Sbjct: 9   ASQASTATANGERTVTARAIDRHNPIIKDGRRSFTAP---CSSGDDYVAP-------YRQ 68

Query: 73  LIKSKKTSSKANRKTKTKIPSVKQENEEKESPHTLPSTDILKKSSFIPADIVTRSFAKLS 132
           L K  +  S +      ++   ++ N          S  ++K  S+    +  +SF    
Sbjct: 69  LSKITRVPSSSGDGKSVQVDKGRRSN----------SGSLMKLISY-DVSLARKSF---G 128

Query: 133 DLVAPPPPPPAGSSRYLLESDTQSQFFDELPEIDPVYDIVPADGYKELKTEVNQDESTSS 192
            +VA P  PP GS+RYLL SD  S              +  + G   + TE ++  +   
Sbjct: 129 CVVATPKTPP-GSTRYLLGSDPVS--------------LAGSTGQDTVATEESEASAPKR 188

Query: 193 TTQAPLSQEPKP--TPTKQVVVLMVSL--HCKGCEGKVRKHLSKME-GVTSFNIDYAAKK 252
            +  P+ ++ K   + + QVVVL VSL  HC+GC+GKV+KHLSKM+ GVTSFNID+A+KK
Sbjct: 189 GSSGPVEEKKKSSGSGSDQVVVLRVSLHCHCRGCQGKVKKHLSKMQVGVTSFNIDFASKK 246

Query: 253 VTIEGDVTPVGVLASVSKLKHAKFWTYQPPTPPPPTPPPQSP 290
           VT+ GD+TP+ VL  +SK+K+A+FW     TPPPP+ P  +P
Sbjct: 249 VTVTGDITPLEVLGCLSKVKNAQFW-----TPPPPSIPRANP 246

[Close]

BLAST of HG10020286 vs. TAIR 10
Match: AT2G37390.2 (Chloroplast-targeted copper chaperone protein )

HSP 1 Score: 120.2 bits (300), Expect = 3.0e-27
Identity = 100/263 (38.02%), Postives = 132/263 (50.19%), Query Frame = 0


Query: 29  GRALDRHNPIICDGRRNSTAPNTLLTPPRDFSRPPFSPQPHHHQLIKSKKTSSKANRKTK 88
           GRA+DRHNPII DGRR+            DF + P S +      + +KK      R++ 
Sbjct: 36  GRAIDRHNPIIKDGRRSFA---------DDFIKLPTSAEDGE---MSNKKLEIYKGRRSI 95

Query: 89  TKIPSVKQENEEKESPHTLPSTDILKKSSFIPADIVTRSFAKLSDLVAPPPPPPAGSSRY 148
           T                       L K       +  +SF+ ++         P GS+RY
Sbjct: 96  T--------GRRSTGGGGGGGAAALLKLITNDIGLARKSFSCVARPACDLIKTPVGSTRY 155

Query: 149 LLESDTQSQFFDELPEIDPVYDIVPADGYKELKTEVNQDESTSSTTQAPLSQEPKPT--P 208
           LL SD            D +   V  D  K ++ E    E  + T       E K T   
Sbjct: 156 LLGSDP-----------DSITGSVDQDPAKTVEAEAPAGEDKTLT-------EKKTTCGD 215

Query: 209 TKQVVVLMVSLHCKGCEGKVRKHLSKMEGVTSFNIDYAAKKVTIEGDVTPVGVLASVSKL 268
           T QVVVL VSLHC+GCEGKVRKHL++M+GVTSFNID+AAKKVT+ GD+TP+ +L S+SK+
Sbjct: 216 TDQVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGDITPLEILDSISKV 258

Query: 269 KHAKFWTYQPPTPPPPTPPPQSP 290
           K+A+FWT   PT P P    Q+P
Sbjct: 276 KNAQFWT--NPTIPKPNVETQNP 258

The following BLAST results are available for this feature:

BLAST of HG10020286 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904004.1	4.1e-143	91.94	protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like [Benincasa hispida]	[more]
XP_008442592.1	5.0e-141	88.75	PREDICTED: uncharacterized protein LOC103486416 [Cucumis melo]	[more]
XP_004137778.1	3.2e-140	89.10	protein SODIUM POTASSIUM ROOT DEFECTIVE 3 [Cucumis sativus] >KGN58901.1 hypothet...	[more]
XP_022939936.1	2.0e-137	87.10	protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like isoform X1 [Cucurbita moschata] >...	[more]
XP_023539840.1	3.3e-137	87.10	protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10020286 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDS4	6.3e-30	35.58	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAK...	[more]
Q8RXH8	9.1e-29	36.30	Protein SODIUM POTASSIUM ROOT DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=NAK...	[more]
Q58FZ0	1.2e-25	36.06	Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAK...	[more]
Q94BT9	1.2e-09	46.48	Copper transport protein ATX1 OS=Arabidopsis thaliana OX=3702 GN=ATX1 PE=1 SV=2	[more]
O82089	6.8e-08	39.18	Copper transport protein CCH OS=Arabidopsis thaliana OX=3702 GN=CCH PE=1 SV=1	[more]

BLAST of HG10020286 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B6T8	2.4e-141	88.75	uncharacterized protein LOC103486416 OS=Cucumis melo OX=3656 GN=LOC103486416 PE=...	[more]
A0A0A0LFM6	1.6e-140	89.10	HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G735010 PE=4 SV...	[more]
A0A6J1FP71	9.5e-138	87.10	protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like isoform X1 OS=Cucurbita moschata ...	[more]
A0A6J1KUA4	3.0e-136	86.13	protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1CWM7	1.2e-132	85.48	protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like isoform X2 OS=Momordica charantia...	[more]

BLAST of HG10020286 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02600.2	4.5e-31	35.58	Heavy metal transport/detoxification superfamily protein	[more]
AT5G02600.1	4.5e-31	35.58	Heavy metal transport/detoxification superfamily protein	[more]
AT3G53530.1	6.5e-30	36.30	Chloroplast-targeted copper chaperone protein	[more]
AT3G53530.2	1.6e-28	36.17	Chloroplast-targeted copper chaperone protein	[more]
AT2G37390.2	3.0e-27	38.02	Chloroplast-targeted copper chaperone protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 213..266 e-value: 2.3E-13 score: 50.3
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 209..269 score: 11.521192
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 212..270 e-value: 5.26447E-12 score: 58.3861
None	No IPR available	GENE3D	3.30.70.100		coord: 207..270 e-value: 2.1E-15 score: 58.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 274..291
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..310
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 273..310
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..206
None	No IPR available	PANTHER	PTHR46119:SF15	PROTEIN SODIUM POTASSIUM ROOT DEFECTIVE 2	coord: 9..283
IPR044526	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1/2/3	PANTHER	PTHR46119	OS08G0405700 PROTEIN	coord: 9..283
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 206..267

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10020286.1	HG10020286.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding