HG10020268 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020268
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	60S ribosomal protein L4-like
Location	Chr04: 30416613 .. 30418316 (-)
RNA-Seq Expression	HG10020268
Synteny	HG10020268

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCGCCGCCGCTCGCCCTTTGGTCGCCGTCCAGTCTCTCGAAGGCGACATGGCCACAGATTCTTCTCAGACGGTGCCATTGCCCGATGTCATGAAAGCTTCTATCCGTCCTGATATCGTCAACTTCGTCCACGCCAACATTTCTAAGAACCGCCGCCAACCTTATGCCGTGAGCAAGCGTGCCGGTCATCAAACCTCCGCAGAGTCATGGGGTACTGGACGAGCCGTTTCTCGTATCCCTCGTGTTCCTGGTGGCGGTACTCACCGTGCTGGTCAGGGAGCTTTCGGAAACATGTGTCGTGGAGGTCGTATGTTTGCTCCGACGAAGATCTGGCGCCGATGGCACCGAAAAATCAACGTGAATCAAAAGAGGTATGCTGTTGTTTCTGCCATTGCTGCTTCTGCAATTCCTTCTTTGGTTTTGGCTCGTGGCCACCGGATCGAGTCTGTTCCGGAATTGCCGCTTGTGATTACCGATTCCGCTGAGGGAATCGAGAAAACCTCTTCTGCGATTAAGGTTTTGAAGCAGATCGGTGCTTTGCCCGATGCTGAGAAAGCGAAAGACAGTCATGCCATTCGCCCTGGTAAGGGTAAGATGAGGAACCGTCGGTACATTTCGCGAAAGGGTCCATTGATTGTTTATGGTACTGAAGGTGCTAAGCTTGTCAAGGCCTTCCGCAACATTCCGGGTATTGATATTGTGAATGTTGAGAGGCTGAATCTTTTGAAGCTTGCTCCTGGAGGTCATCTTGGAAGATTTGTTATCTGGACAAAAACTGCTTTTGAAAAGCTTGATTCCATTTATGGATCGTTTGAGAAGTCTTCTGAAAAGAAGAAGGGTTACGTGCTTCCAAGGGCCAAAATGGTCAATGCTGATTTGTCTAGGATCATCAATTCCGACGAGGTTCAATCTGTTGTTAAACCCATCAAGAAGGGTGTGAAGAGACCTTCATTGAAGAAGAACCCACTTAAGAACCTTAACGCCATGTTGAAGCTTAACCCGTATGCTAAGACTGCAAGGAGAATGTCTTTATTGGCCGAGGCACAGCGCGTGAAAGCCAAGAAGGAAAAGCTTGACAAGAAGAGGAACATTATCCCGAAGGTATCTCTTGAATTTGGCTTTGTTGGTTCTCACTTTTTAATTACTATGTGGTTGGTTTCAAATTATAGGAGATTTCTAAATTTATCAATCAAGTATATGATGATGATAGTTTAAACCAATTTTGAAATGGGATTCAATATTCTGATGTAGAGAGATGATAATATTATATTGAACTAGGATGCTTTTACACATTACATTTCCGCAATGCATTCAACTGTTTCGGAACCATATTGTTTTGTTTGTTAGATTCTATAGTATGGCATAGATGAGATTTGGATGCTGCCAAGGTCTTAGTTTCCACTCTTAAACGCATGTTCTTTGATAGATACATATCATCTGTTTCCCATTGACATTGATGAAGCATTTGTGAATTGGTGGTCCATTATTTTCTTTGAACTGATTACTATTAGTGGCTTGGCTAGTTAGTAATTTCATGATATTGTGAGAGACCCCTCTTGAACCTTGTGGGCATTTTGTCTTCAGGAGGAGGCTGCAGCAGTAAAGGCAGCAGGCAAAGCATGGTACCAGACAATGATTTCAGATAGTGATTACACTGAGTTCGAGAATTTCTCCAAGTGGCTTGGTGTCTCTCAGTGA

mRNA sequence

ATGGCCGCCGCCGCCGCTCGCCCTTTGGTCGCCGTCCAGTCTCTCGAAGGCGACATGGCCACAGATTCTTCTCAGACGGTGCCATTGCCCGATGTCATGAAAGCTTCTATCCGTCCTGATATCGTCAACTTCGTCCACGCCAACATTTCTAAGAACCGCCGCCAACCTTATGCCGTGAGCAAGCGTGCCGGTCATCAAACCTCCGCAGAGTCATGGGGTACTGGACGAGCCGTTTCTCGTATCCCTCGTGTTCCTGGTGGCGGTACTCACCGTGCTGGTCAGGGAGCTTTCGGAAACATGTGTCGTGGAGGTCGTATGTTTGCTCCGACGAAGATCTGGCGCCGATGGCACCGAAAAATCAACGTGAATCAAAAGAGGTATGCTGTTGTTTCTGCCATTGCTGCTTCTGCAATTCCTTCTTTGGTTTTGGCTCGTGGCCACCGGATCGAGTCTGTTCCGGAATTGCCGCTTGTGATTACCGATTCCGCTGAGGGAATCGAGAAAACCTCTTCTGCGATTAAGGTTTTGAAGCAGATCGGTGCTTTGCCCGATGCTGAGAAAGCGAAAGACAGTCATGCCATTCGCCCTGGTAAGGGTAAGATGAGGAACCGTCGGTACATTTCGCGAAAGGGTCCATTGATTGTTTATGGTACTGAAGGTGCTAAGCTTGTCAAGGCCTTCCGCAACATTCCGGGTATTGATATTGTGAATGTTGAGAGGCTGAATCTTTTGAAGCTTGCTCCTGGAGGTCATCTTGGAAGATTTGTTATCTGGACAAAAACTGCTTTTGAAAAGCTTGATTCCATTTATGGATCGTTTGAGAAGTCTTCTGAAAAGAAGAAGGGTTACGTGCTTCCAAGGGCCAAAATGGTCAATGCTGATTTGTCTAGGATCATCAATTCCGACGAGGTTCAATCTGTTGTTAAACCCATCAAGAAGGGTGTGAAGAGACCTTCATTGAAGAAGAACCCACTTAAGAACCTTAACGCCATGTTGAAGCTTAACCCGTATGCTAAGACTGCAAGGAGAATGTCTTTATTGGCCGAGGCACAGCGCGTGAAAGCCAAGAAGGAAAAGCTTGACAAGAAGAGGAACATTATCCCGAAGGAGGAGGCTGCAGCAGTAAAGGCAGCAGGCAAAGCATGGTACCAGACAATGATTTCAGATAGTGATTACACTGAGTTCGAGAATTTCTCCAAGTGGCTTGGTGTCTCTCAGTGA

Coding sequence (CDS)

ATGGCCGCCGCCGCCGCTCGCCCTTTGGTCGCCGTCCAGTCTCTCGAAGGCGACATGGCCACAGATTCTTCTCAGACGGTGCCATTGCCCGATGTCATGAAAGCTTCTATCCGTCCTGATATCGTCAACTTCGTCCACGCCAACATTTCTAAGAACCGCCGCCAACCTTATGCCGTGAGCAAGCGTGCCGGTCATCAAACCTCCGCAGAGTCATGGGGTACTGGACGAGCCGTTTCTCGTATCCCTCGTGTTCCTGGTGGCGGTACTCACCGTGCTGGTCAGGGAGCTTTCGGAAACATGTGTCGTGGAGGTCGTATGTTTGCTCCGACGAAGATCTGGCGCCGATGGCACCGAAAAATCAACGTGAATCAAAAGAGGTATGCTGTTGTTTCTGCCATTGCTGCTTCTGCAATTCCTTCTTTGGTTTTGGCTCGTGGCCACCGGATCGAGTCTGTTCCGGAATTGCCGCTTGTGATTACCGATTCCGCTGAGGGAATCGAGAAAACCTCTTCTGCGATTAAGGTTTTGAAGCAGATCGGTGCTTTGCCCGATGCTGAGAAAGCGAAAGACAGTCATGCCATTCGCCCTGGTAAGGGTAAGATGAGGAACCGTCGGTACATTTCGCGAAAGGGTCCATTGATTGTTTATGGTACTGAAGGTGCTAAGCTTGTCAAGGCCTTCCGCAACATTCCGGGTATTGATATTGTGAATGTTGAGAGGCTGAATCTTTTGAAGCTTGCTCCTGGAGGTCATCTTGGAAGATTTGTTATCTGGACAAAAACTGCTTTTGAAAAGCTTGATTCCATTTATGGATCGTTTGAGAAGTCTTCTGAAAAGAAGAAGGGTTACGTGCTTCCAAGGGCCAAAATGGTCAATGCTGATTTGTCTAGGATCATCAATTCCGACGAGGTTCAATCTGTTGTTAAACCCATCAAGAAGGGTGTGAAGAGACCTTCATTGAAGAAGAACCCACTTAAGAACCTTAACGCCATGTTGAAGCTTAACCCGTATGCTAAGACTGCAAGGAGAATGTCTTTATTGGCCGAGGCACAGCGCGTGAAAGCCAAGAAGGAAAAGCTTGACAAGAAGAGGAACATTATCCCGAAGGAGGAGGCTGCAGCAGTAAAGGCAGCAGGCAAAGCATGGTACCAGACAATGATTTCAGATAGTGATTACACTGAGTTCGAGAATTTCTCCAAGTGGCTTGGTGTCTCTCAGTGA

Protein sequence

MAAAAARPLVAVQSLEGDMATDSSQTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVITDSAEGIEKTSSAIKVLKQIGALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINSDEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDKKRNIIPKEEAAAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ

Homology

[Close]

BLAST of HG10020268 vs. NCBI nr
Match: XP_038905069.1 (60S ribosomal protein L4 [Benincasa hispida])

HSP 1 Score: 773.5 bits (1996), Expect = 9.2e-220
Identity = 399/405 (98.52%), Postives = 403/405 (99.51%), Query Frame = 0


Query: 2   AAAAARPLVAVQSLEGDMATDSSQTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSK 61
           AAAAARPLVAVQSLEGDMATDSSQTVPLPDVMKASIRPDIVNFVHANISKN RQPYAVSK
Sbjct: 3   AAAAARPLVAVQSLEGDMATDSSQTVPLPDVMKASIRPDIVNFVHANISKNSRQPYAVSK 62

Query: 62  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 121
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 63  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 122

Query: 122 VNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVITDSAEGIEKTSSAIKVLKQIGA 181
           VNQKRYAVVSAIAASA+PSLVLARGHRIESVPELPLVI+DSAEGIEKTSSAIKVLKQIGA
Sbjct: 123 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIGA 182

Query: 182 LPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERL 241
           LPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPG+DIVNVERL
Sbjct: 183 LPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVDIVNVERL 242

Query: 242 NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINS 301
           NLLKLAPGGHLGRFV+WTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINS
Sbjct: 243 NLLKLAPGGHLGRFVVWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINS 302

Query: 302 DEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 361
           DEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD
Sbjct: 303 DEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 362

Query: 362 KKRNIIPKEEAAAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           KKRNIIPKEEA AVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 363 KKRNIIPKEEATAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407

[Close]

BLAST of HG10020268 vs. NCBI nr
Match: KAG6580580.1 (60S ribosomal protein L4-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017334.1 60S ribosomal protein L4-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 769.6 bits (1986), Expect = 1.3e-218
Identity = 398/406 (98.03%), Postives = 402/406 (99.01%), Query Frame = 0


Query: 1   MAAAAARPLVAVQSLEGDMATDSSQTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLVAVQSLEGDMATD++ TVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS
Sbjct: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVITDSAEGIEKTSSAIKVLKQIG 180
           NVNQKRYAVVSAIAASA+PSLVLARGHRIESVPELPLVI+DSAEGIEKTSSAIK LKQIG
Sbjct: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKALKQIG 180

Query: 181 ALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVER 240
           ALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVER
Sbjct: 181 ALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300

Query: 301 SDEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360
           SDEVQSVVKPIKK VKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEVQSVVKPIKKDVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEAAAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           DKKRNIIPKEEA AVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 361 DKKRNIIPKEEATAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406

[Close]

BLAST of HG10020268 vs. NCBI nr
Match: XP_023528888.1 (60S ribosomal protein L4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 766.9 bits (1979), Expect = 8.6e-218
Identity = 396/406 (97.54%), Postives = 402/406 (99.01%), Query Frame = 0


Query: 1   MAAAAARPLVAVQSLEGDMATDSSQTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLVAVQSLEGDMATD++ TVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS
Sbjct: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVITDSAEGIEKTSSAIKVLKQIG 180
           NVNQKRYAVVSAIAASA+PSLVLARGHRIESVPELPLVI+DSAEGIEKTSSAIK LKQIG
Sbjct: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKALKQIG 180

Query: 181 ALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVER 240
           ALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGI+IVNVER
Sbjct: 181 ALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEIVNVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300

Query: 301 SDEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360
           SDEVQSVVKPIKK VKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEVQSVVKPIKKDVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEAAAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           DKKRNIIPKE+A AVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 361 DKKRNIIPKEDATAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406

[Close]

BLAST of HG10020268 vs. NCBI nr
Match: XP_022935156.1 (60S ribosomal protein L4-like [Cucurbita moschata])

HSP 1 Score: 765.8 bits (1976), Expect = 1.9e-217
Identity = 395/405 (97.53%), Postives = 401/405 (99.01%), Query Frame = 0


Query: 2   AAAAARPLVAVQSLEGDMATDSSQTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSK 61
           AAAAARPLVAVQSLEGD+ATD++ TVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSK
Sbjct: 3   AAAAARPLVAVQSLEGDIATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSK 62

Query: 62  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 121
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 63  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 122

Query: 122 VNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVITDSAEGIEKTSSAIKVLKQIGA 181
           VNQKRYAVVSAIAASA+PSLVLARGHRIESVPELPLVI+DSAEGIEKTSSAIK LKQ+GA
Sbjct: 123 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKALKQVGA 182

Query: 182 LPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERL 241
           LPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERL
Sbjct: 183 LPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERL 242

Query: 242 NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINS 301
           NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINS
Sbjct: 243 NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINS 302

Query: 302 DEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 361
           DEVQSVVKPIKK VKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD
Sbjct: 303 DEVQSVVKPIKKDVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 362

Query: 362 KKRNIIPKEEAAAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           KKRNIIPKEEA AVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 363 KKRNIIPKEEATAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407

[Close]

BLAST of HG10020268 vs. NCBI nr
Match: XP_022983290.1 (60S ribosomal protein L4-like [Cucurbita maxima])

HSP 1 Score: 765.0 bits (1974), Expect = 3.3e-217
Identity = 395/404 (97.77%), Postives = 400/404 (99.01%), Query Frame = 0


Query: 3   AAAARPLVAVQSLEGDMATDSSQTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSKR 62
           AAAARPLVAVQSLEGDMATD++ TVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSKR
Sbjct: 2   AAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSKR 61

Query: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 122
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV
Sbjct: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121

Query: 123 NQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVITDSAEGIEKTSSAIKVLKQIGAL 182
           NQKRYAVVSAIAASA+PSLVLARGHRIESVPELPLVI+DSAEGIEKTSSAIK LKQIGAL
Sbjct: 122 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKALKQIGAL 181

Query: 183 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 242
           PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN
Sbjct: 182 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 241

Query: 243 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINSD 302
           LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINSD
Sbjct: 242 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINSD 301

Query: 303 EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 362
           EVQSVVKPIKK VKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAK+EKLDK
Sbjct: 302 EVQSVVKPIKKDVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKQEKLDK 361

Query: 363 KRNIIPKEEAAAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           KRNIIPKEEA AVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 362 KRNIIPKEEATAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]

BLAST of HG10020268 vs. ExPASy Swiss-Prot
Match: Q9XF97 (60S ribosomal protein L4 OS=Prunus armeniaca OX=36596 GN=RPL4 PE=2 SV=1)

HSP 1 Score: 704.9 bits (1818), Expect = 5.3e-202
Identity = 357/405 (88.15%), Postives = 385/405 (95.06%), Query Frame = 0


Query: 2   AAAAARPLVAVQSLEGDMATDSSQTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSK 61
           AAAAARPLV VQSLEGDMATD +QTV LPDVMKASIRPDIV FVH+NISKN RQPYAVSK
Sbjct: 4   AAAAARPLVTVQSLEGDMATDQTQTVALPDVMKASIRPDIVTFVHSNISKNSRQPYAVSK 63

Query: 62  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 121
           +AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 64  KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 123

Query: 122 VNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVITDSAEGIEKTSSAIKVLKQIGA 181
           VNQKRYAVVSAIAASA+PSLVLARGH+IE+VPELPLV++DS EG+E+TS+A+KVLKQIGA
Sbjct: 124 VNQKRYAVVSAIAASAVPSLVLARGHKIETVPELPLVVSDSIEGVEETSAALKVLKQIGA 183

Query: 182 LPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERL 241
             DAEKAKDSH+IRPGKGKMRNRRYI+RKGPLIVYGTEGAKLVKAFRNIPGIDI+NVERL
Sbjct: 184 YSDAEKAKDSHSIRPGKGKMRNRRYINRKGPLIVYGTEGAKLVKAFRNIPGIDIINVERL 243

Query: 242 NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINS 301
           NLLKLAPGGHLGRFV+WTK+AFEKLDSIYGSF+K SEKK GYVLPR+KMVNADL+RIINS
Sbjct: 244 NLLKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDKVSEKKNGYVLPRSKMVNADLARIINS 303

Query: 302 DEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 361
           DEVQSVV PI++G KR  LKKNPL+ LN MLKLNPYAKTARRMSLLAEA+RVKAKKEKLD
Sbjct: 304 DEVQSVVSPIQEGSKRAPLKKNPLRILNTMLKLNPYAKTARRMSLLAEAERVKAKKEKLD 363

Query: 362 KKRNIIPKEEAAAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           KKR  I KEEA+ +KAAGKAWYQTMISDSDYTEF+NF+KWLGVSQ
Sbjct: 364 KKRKPISKEEASTIKAAGKAWYQTMISDSDYTEFDNFTKWLGVSQ 408

[Close]

BLAST of HG10020268 vs. ExPASy Swiss-Prot
Match: Q9SF40 (60S ribosomal protein L4-1 OS=Arabidopsis thaliana OX=3702 GN=RPL4A PE=1 SV=1)

HSP 1 Score: 674.1 bits (1738), Expect = 1.0e-192
Identity = 335/406 (82.51%), Postives = 376/406 (92.61%), Query Frame = 0


Query: 1   MAAAAARPLVAVQSLEGDMATDSSQTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLV +Q+L+GDM+TD S TV LPDVM A +RPDIVNFVHA IS N RQPYAVS
Sbjct: 1   MAAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 120

Query: 121 NVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVITDSAEGIEKTSSAIKVLKQIG 180
           NVN KR+A+VSAIAA+A+P+LV+ARGH+IE+VPE+PLV++DSAE +EKTS+AIKVLKQIG
Sbjct: 121 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 180

Query: 181 ALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVER 240
           A  DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PG+++ +VER
Sbjct: 181 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTK+AFEKL+SIYGSFEK SEKKKGYVLPRAKMVNADL+RIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 300

Query: 301 SDEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360
           SDE+QSVV PIKK  KR  LKKNPLKNLN MLKLNPYAKTA+RMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEAAAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
            KKR  + KEEA A+KAAGK+WY+TMISDSDYTEF+NF+KWLG SQ
Sbjct: 361 AKKRKTVTKEEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 406

[Close]

BLAST of HG10020268 vs. ExPASy Swiss-Prot
Match: P49691 (60S ribosomal protein L4-2 OS=Arabidopsis thaliana OX=3702 GN=RPL4D PE=1 SV=2)

HSP 1 Score: 673.3 bits (1736), Expect = 1.7e-192
Identity = 335/406 (82.51%), Postives = 375/406 (92.36%), Query Frame = 0


Query: 1   MAAAAARPLVAVQSLEGDMATDSSQTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60
           +A+AAARPLV VQ L+GDM+TD S TV LPDVM A +RPDIVNFVHA IS N RQPYAVS
Sbjct: 2   VASAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 61

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 62  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 121

Query: 121 NVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVITDSAEGIEKTSSAIKVLKQIG 180
           NVN KR+A+VSAIAA+A+P+LV+ARGH+IE+VPE+PLV++DSAE +EKTS+AIKVLKQIG
Sbjct: 122 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 181

Query: 181 ALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVER 240
           A  DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PG+++ +VER
Sbjct: 182 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVER 241

Query: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTK+AFEKL+SIYGSFEK SEKKKGYVLPRAKMVNADL+RIIN
Sbjct: 242 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 301

Query: 301 SDEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360
           SDEVQSVV PIK G KR  LKKNPLKNLN M KLNPYAKTA+RMSLLAEA RVKAKKEKL
Sbjct: 302 SDEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKL 361

Query: 361 DKKRNIIPKEEAAAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           +KKR ++ KEEA A+KAAGKAWYQTMISDSDYTEF+NF+KWLG SQ
Sbjct: 362 EKKRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 407

[Close]

BLAST of HG10020268 vs. ExPASy Swiss-Prot
Match: P08429 (60S ribosomal protein L4-A OS=Xenopus laevis OX=8355 GN=rpl4-a PE=2 SV=2)

HSP 1 Score: 441.0 bits (1133), Expect = 1.4e-122
Identity = 220/361 (60.94%), Postives = 280/361 (77.56%), Query Frame = 0


Query: 1   MAAAAARPLVAVQSLEGDMATDSSQTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60
           ++ A ARPL++V S +G+    S + V +P V +A IRPDIVNFVH N+ KN RQPYAVS
Sbjct: 3   VSMACARPLISVYSEKGE---SSGKNVTMPAVFRAPIRPDIVNFVHTNLRKNNRQPYAVS 62

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++
Sbjct: 63  KLAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRV 122

Query: 121 NVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVITDSAEGIEKTSSAIKVLKQIG 180
           N  QKRYAV SA+AASA+P+L++++GHRIE +PE+PLV+ D  E  +KT  A+ +LK++ 
Sbjct: 123 NTTQKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKKLK 182

Query: 181 ALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVER 240
           A  D +K   S  +R GKGKMRNRR I R+GP ++Y  E   LVKAFRNIPGI ++NV +
Sbjct: 183 AWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIY-NENNGLVKAFRNIPGITLLNVSK 242

Query: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300
           LNLL+LAPGGH+GRF IWT++AF KLD +YG++ KS++ K  Y LP  KM N DL+RI+ 
Sbjct: 243 LNLLRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRILK 302

Query: 301 SDEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360
           S E+Q  ++   K VKR  LKKNPLKNL  M++LNPYAKTARR ++L + + +KAK++K 
Sbjct: 303 SQEIQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENIKAKEKKP 359

Query: 361 D 362
           D
Sbjct: 363 D 359

[Close]

BLAST of HG10020268 vs. ExPASy Swiss-Prot
Match: Q9D8E6 (60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3)

HSP 1 Score: 441.0 bits (1133), Expect = 1.4e-122
Identity = 225/383 (58.75%), Postives = 287/383 (74.93%), Query Frame = 0


Query: 4   AAARPLVAVQSLEGDMATDSSQTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSKRA 63
           A ARPL++V S +G+    S + V LP V KA IRPDIVNFVH N+ KN RQPYAVS+ A
Sbjct: 2   ACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 61

Query: 64  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 123
           GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N  
Sbjct: 62  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 121

Query: 124 QKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVITDSAEGIEKTSSAIKVLKQIGALP 183
           QKRYA+ SA+AASA+P+LV+++GHRIE VPELPLV+ D  EG +KT  A+++LK++ A  
Sbjct: 122 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVQLLKKLKAWN 181

Query: 184 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLNL 243
           D +K   S  +R GKGKMRNRR I R+GP I+Y  +   ++KAFRNIPGI ++NV +LN+
Sbjct: 182 DIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG-IIKAFRNIPGITLLNVSKLNI 241

Query: 244 LKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINSDE 303
           LKLAPGGH+GRF IWT++AF KLD +YG++ K++  K  Y LP  KM+N DLSRI+ S E
Sbjct: 242 LKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMMNTDLSRILKSPE 301

Query: 304 VQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD-- 363
           +Q  ++  +K + R  LKKNPLKNL  MLKLNPYAKT RR ++L +A+  K + +KL+  
Sbjct: 302 IQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVKKLEAA 361

Query: 364 ------KKRNIIPKEEAAAVKAA 379
                 K   ++P++  A  K A
Sbjct: 362 ATALATKSEKVVPEKGTADKKPA 380

[Close]

BLAST of HG10020268 vs. ExPASy TrEMBL
Match: A0A6J1F3R9 (60S ribosomal protein L4-like OS=Cucurbita moschata OX=3662 GN=LOC111442111 PE=3 SV=1)

HSP 1 Score: 765.8 bits (1976), Expect = 9.3e-218
Identity = 395/405 (97.53%), Postives = 401/405 (99.01%), Query Frame = 0


Query: 2   AAAAARPLVAVQSLEGDMATDSSQTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSK 61
           AAAAARPLVAVQSLEGD+ATD++ TVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSK
Sbjct: 3   AAAAARPLVAVQSLEGDIATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSK 62

Query: 62  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 121
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 63  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 122

Query: 122 VNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVITDSAEGIEKTSSAIKVLKQIGA 181
           VNQKRYAVVSAIAASA+PSLVLARGHRIESVPELPLVI+DSAEGIEKTSSAIK LKQ+GA
Sbjct: 123 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKALKQVGA 182

Query: 182 LPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERL 241
           LPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERL
Sbjct: 183 LPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERL 242

Query: 242 NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINS 301
           NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINS
Sbjct: 243 NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINS 302

Query: 302 DEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 361
           DEVQSVVKPIKK VKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD
Sbjct: 303 DEVQSVVKPIKKDVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 362

Query: 362 KKRNIIPKEEAAAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           KKRNIIPKEEA AVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 363 KKRNIIPKEEATAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407

[Close]

BLAST of HG10020268 vs. ExPASy TrEMBL
Match: A0A6J1J5G3 (60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111481914 PE=3 SV=1)

HSP 1 Score: 765.0 bits (1974), Expect = 1.6e-217
Identity = 395/404 (97.77%), Postives = 400/404 (99.01%), Query Frame = 0


Query: 3   AAAARPLVAVQSLEGDMATDSSQTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSKR 62
           AAAARPLVAVQSLEGDMATD++ TVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSKR
Sbjct: 2   AAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSKR 61

Query: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 122
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV
Sbjct: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121

Query: 123 NQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVITDSAEGIEKTSSAIKVLKQIGAL 182
           NQKRYAVVSAIAASA+PSLVLARGHRIESVPELPLVI+DSAEGIEKTSSAIK LKQIGAL
Sbjct: 122 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKALKQIGAL 181

Query: 183 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 242
           PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN
Sbjct: 182 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 241

Query: 243 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINSD 302
           LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINSD
Sbjct: 242 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINSD 301

Query: 303 EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 362
           EVQSVVKPIKK VKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAK+EKLDK
Sbjct: 302 EVQSVVKPIKKDVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKQEKLDK 361

Query: 363 KRNIIPKEEAAAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           KRNIIPKEEA AVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 362 KRNIIPKEEATAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]

BLAST of HG10020268 vs. ExPASy TrEMBL
Match: A0A6J1FVZ1 (60S ribosomal protein L4-like OS=Cucurbita moschata OX=3662 GN=LOC111448977 PE=3 SV=1)

HSP 1 Score: 763.8 bits (1971), Expect = 3.5e-217
Identity = 392/406 (96.55%), Postives = 402/406 (99.01%), Query Frame = 0


Query: 1   MAAAAARPLVAVQSLEGDMATDSSQTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLVAVQSLEGDMATD++ TVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS
Sbjct: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVITDSAEGIEKTSSAIKVLKQIG 180
           NVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVI+DSAEGIEKTSSAIKVLKQ+G
Sbjct: 121 NVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180

Query: 181 ALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVER 240
           ALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGI++VNVER
Sbjct: 181 ALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300

Query: 301 SDEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360
           SDEVQSVV PIKK VKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEAAAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           DKKRNIIPKEEA+ ++AAGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406

[Close]

BLAST of HG10020268 vs. ExPASy TrEMBL
Match: A0A6J1L0N2 (60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111498775 PE=3 SV=1)

HSP 1 Score: 762.3 bits (1967), Expect = 1.0e-216
Identity = 391/406 (96.31%), Postives = 401/406 (98.77%), Query Frame = 0


Query: 1   MAAAAARPLVAVQSLEGDMATDSSQTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLVAVQSLEGDMATD++ TVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS
Sbjct: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVITDSAEGIEKTSSAIKVLKQIG 180
           NVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVI+DSAEGIEKTSSAIKVLKQ+G
Sbjct: 121 NVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180

Query: 181 ALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVER 240
           A PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGI++VNVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300

Query: 301 SDEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360
           SDEVQSVV PIKK VKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEAAAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           DKKRNIIPKEEA+ ++AAGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406

[Close]

BLAST of HG10020268 vs. ExPASy TrEMBL
Match: A0A0A0LDW3 (Ribos_L4_asso_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G736750 PE=3 SV=1)

HSP 1 Score: 756.9 bits (1953), Expect = 4.3e-215
Identity = 391/404 (96.78%), Postives = 399/404 (98.76%), Query Frame = 0


Query: 3   AAAARPLVAVQSLEGDMATDSSQTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSKR 62
           AAAARPLVAVQ LEGDMATDSS TVPLPDVMKASIRPDIV+FVH+NISKN RQPYAVSKR
Sbjct: 2   AAAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61

Query: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 122
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV
Sbjct: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121

Query: 123 NQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVITDSAEGIEKTSSAIKVLKQIGAL 182
           NQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVI+DSAEGIEKTSSAIKVLKQ+GAL
Sbjct: 122 NQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGAL 181

Query: 183 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 242
           PDAEKAKDSHAIR GKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN
Sbjct: 182 PDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 241

Query: 243 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINSD 302
           LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPR+KMVNADL+RIINSD
Sbjct: 242 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINSD 301

Query: 303 EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 362
           EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK
Sbjct: 302 EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 361

Query: 363 KRNIIPKEEAAAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           KR IIPKE+AAAVKAAGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 362 KRGIIPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 405

[Close]

BLAST of HG10020268 vs. TAIR 10
Match: AT3G09630.1 (Ribosomal protein L4/L1 family )

HSP 1 Score: 674.1 bits (1738), Expect = 7.1e-194
Identity = 335/406 (82.51%), Postives = 376/406 (92.61%), Query Frame = 0


Query: 1   MAAAAARPLVAVQSLEGDMATDSSQTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLV +Q+L+GDM+TD S TV LPDVM A +RPDIVNFVHA IS N RQPYAVS
Sbjct: 1   MAAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 120

Query: 121 NVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVITDSAEGIEKTSSAIKVLKQIG 180
           NVN KR+A+VSAIAA+A+P+LV+ARGH+IE+VPE+PLV++DSAE +EKTS+AIKVLKQIG
Sbjct: 121 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 180

Query: 181 ALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVER 240
           A  DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PG+++ +VER
Sbjct: 181 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTK+AFEKL+SIYGSFEK SEKKKGYVLPRAKMVNADL+RIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 300

Query: 301 SDEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360
           SDE+QSVV PIKK  KR  LKKNPLKNLN MLKLNPYAKTA+RMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEAAAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
            KKR  + KEEA A+KAAGK+WY+TMISDSDYTEF+NF+KWLG SQ
Sbjct: 361 AKKRKTVTKEEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 406

[Close]

BLAST of HG10020268 vs. TAIR 10
Match: AT5G02870.1 (Ribosomal protein L4/L1 family )

HSP 1 Score: 673.3 bits (1736), Expect = 1.2e-193
Identity = 335/406 (82.51%), Postives = 375/406 (92.36%), Query Frame = 0


Query: 1   MAAAAARPLVAVQSLEGDMATDSSQTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60
           +A+AAARPLV VQ L+GDM+TD S TV LPDVM A +RPDIVNFVHA IS N RQPYAVS
Sbjct: 2   VASAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 61

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 62  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 121

Query: 121 NVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVITDSAEGIEKTSSAIKVLKQIG 180
           NVN KR+A+VSAIAA+A+P+LV+ARGH+IE+VPE+PLV++DSAE +EKTS+AIKVLKQIG
Sbjct: 122 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 181

Query: 181 ALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVER 240
           A  DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PG+++ +VER
Sbjct: 182 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVER 241

Query: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTK+AFEKL+SIYGSFEK SEKKKGYVLPRAKMVNADL+RIIN
Sbjct: 242 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 301

Query: 301 SDEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360
           SDEVQSVV PIK G KR  LKKNPLKNLN M KLNPYAKTA+RMSLLAEA RVKAKKEKL
Sbjct: 302 SDEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKL 361

Query: 361 DKKRNIIPKEEAAAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           +KKR ++ KEEA A+KAAGKAWYQTMISDSDYTEF+NF+KWLG SQ
Sbjct: 362 EKKRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 407

[Close]

BLAST of HG10020268 vs. TAIR 10
Match: AT3G09630.2 (Ribosomal protein L4/L1 family )

HSP 1 Score: 667.9 bits (1722), Expect = 5.1e-192
Identity = 334/406 (82.27%), Postives = 375/406 (92.36%), Query Frame = 0


Query: 1   MAAAAARPLVAVQSLEGDMATDSSQTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60
           MAAAAARPLV +Q+L+GDM+TD S TV LPDVM A +RPDIVNFVHA IS N RQPYAVS
Sbjct: 1   MAAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 120

Query: 121 NVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVITDSAEGIEKTSSAIKVLKQIG 180
           NVN KR+A+VSAIAA+A+P+LV+ARGH+IE+VPE+PLV++DSAE +EKTS+AIKVLKQIG
Sbjct: 121 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 180

Query: 181 ALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVER 240
           A  DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PG+++ +VER
Sbjct: 181 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTK+AFEKL+SIYGSFEK SEKKKGYVLPRAKMVNADL+RIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 300

Query: 301 SDEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360
           SDE+QSVV PIKK  KR  LKKNPLKNLN MLKLNPYAKTA+RMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEAAAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
            KKR  + K EA A+KAAGK+WY+TMISDSDYTEF+NF+KWLG SQ
Sbjct: 361 AKKRKTVTK-EALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 405

[Close]

BLAST of HG10020268 vs. TAIR 10
Match: AT5G02870.2 (Ribosomal protein L4/L1 family )

HSP 1 Score: 667.2 bits (1720), Expect = 8.6e-192
Identity = 334/406 (82.27%), Postives = 374/406 (92.12%), Query Frame = 0


Query: 1   MAAAAARPLVAVQSLEGDMATDSSQTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60
           +A+AAARPLV VQ L+GDM+TD S TV LPDVM A +RPDIVNFVHA IS N RQPYAVS
Sbjct: 2   VASAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 61

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 62  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 121

Query: 121 NVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVITDSAEGIEKTSSAIKVLKQIG 180
           NVN KR+A+VSAIAA+A+P+LV+ARGH+IE+VPE+PLV++DSAE +EKTS+AIKVLKQIG
Sbjct: 122 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 181

Query: 181 ALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVER 240
           A  DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PG+++ +VER
Sbjct: 182 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVER 241

Query: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTK+AFEKL+SIYGSFEK SEKKKGYVLPRAKMVNADL+RIIN
Sbjct: 242 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 301

Query: 301 SDEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360
           SDEVQSVV PIK G KR  LKKNPLKNLN M KLNPYAKTA+RMSLLAEA RVKAKKEKL
Sbjct: 302 SDEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKL 361

Query: 361 DKKRNIIPKEEAAAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407
           +KKR ++ K EA A+KAAGKAWYQTMISDSDYTEF+NF+KWLG SQ
Sbjct: 362 EKKRKVVTK-EAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 406

The following BLAST results are available for this feature:

BLAST of HG10020268 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905069.1	9.2e-220	98.52	60S ribosomal protein L4 [Benincasa hispida]	[more]
KAG6580580.1	1.3e-218	98.03	60S ribosomal protein L4-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]
XP_023528888.1	8.6e-218	97.54	60S ribosomal protein L4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022935156.1	1.9e-217	97.53	60S ribosomal protein L4-like [Cucurbita moschata]	[more]
XP_022983290.1	3.3e-217	97.77	60S ribosomal protein L4-like [Cucurbita maxima]	[more]

BLAST of HG10020268 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XF97	5.3e-202	88.15	60S ribosomal protein L4 OS=Prunus armeniaca OX=36596 GN=RPL4 PE=2 SV=1	[more]
Q9SF40	1.0e-192	82.51	60S ribosomal protein L4-1 OS=Arabidopsis thaliana OX=3702 GN=RPL4A PE=1 SV=1	[more]
P49691	1.7e-192	82.51	60S ribosomal protein L4-2 OS=Arabidopsis thaliana OX=3702 GN=RPL4D PE=1 SV=2	[more]
P08429	1.4e-122	60.94	60S ribosomal protein L4-A OS=Xenopus laevis OX=8355 GN=rpl4-a PE=2 SV=2	[more]
Q9D8E6	1.4e-122	58.75	60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3	[more]

BLAST of HG10020268 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F3R9	9.3e-218	97.53	60S ribosomal protein L4-like OS=Cucurbita moschata OX=3662 GN=LOC111442111 PE=3...	[more]
A0A6J1J5G3	1.6e-217	97.77	60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111481914 PE=3 S...	[more]
A0A6J1FVZ1	3.5e-217	96.55	60S ribosomal protein L4-like OS=Cucurbita moschata OX=3662 GN=LOC111448977 PE=3...	[more]
A0A6J1L0N2	1.0e-216	96.31	60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111498775 PE=3 S...	[more]
A0A0A0LDW3	4.3e-215	96.78	Ribos_L4_asso_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G73...	[more]

BLAST of HG10020268 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09630.1	7.1e-194	82.51	Ribosomal protein L4/L1 family	[more]
AT5G02870.1	1.2e-193	82.51	Ribosomal protein L4/L1 family	[more]
AT3G09630.2	5.1e-192	82.27	Ribosomal protein L4/L1 family	[more]
AT5G02870.2	8.6e-192	82.27	Ribosomal protein L4/L1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 343..363
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..74
None	No IPR available	PANTHER	PTHR19431:SF6	BNAC03G35890D PROTEIN	coord: 3..406
None	No IPR available	PANTHER	PTHR19431	60S RIBOSOMAL PROTEIN L4	coord: 3..406
IPR002136	Ribosomal protein L4/L1e	PFAM	PF00573	Ribosomal_L4	coord: 27..267 e-value: 4.0E-40 score: 137.5
IPR023574	Ribosomal protein L4 domain superfamily	GENE3D	3.40.1370.10		coord: 4..309 e-value: 1.1E-142 score: 476.6
IPR023574	Ribosomal protein L4 domain superfamily	SUPERFAMILY	52166	Ribosomal protein L4	coord: 22..268
IPR025755	60S ribosomal protein L4, C-terminal domain	PFAM	PF14374	Ribos_L4_asso_C	coord: 281..353 e-value: 2.2E-28 score: 98.1
IPR013000	Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site	PROSITE	PS00939	RIBOSOMAL_L1E	coord: 121..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10020268.1	HG10020268.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome