Sequences
The following sequences are available for this feature:
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGGGAGACTCTTGCTCTCCTCTTTGGGTTGAAGCTTGTCCAACGAATGTGCATCTCTATTGTTCATGTGGAGATCGATTACGAGGCTTTGGTCAATATTATTAAGAAGGATTCTGGGAGGTTCTCTTCTTTGAAGGTTATTTTGTGTGAAATTAAGAATCAGATGTTAAAAATCAATATGAAGAGTTTTTCTCATATCCCTAGATTACGTAACAATGTTGCTCATGAATTATTTAAGTGGGCATGGGATAACGAGGGAAGTGGGGAGTGGTATGTTAGCCCTCCCAAATAG
ATGGAGGGGGAGACTCTTGCTCTCCTCTTTGGGTTGAAGCTTGTCCAACGAATGTGCATCTCTATTGTTCATGTGGAGATCGATTACGAGGCTTTGGTCAATATTATTAAGAAGGATTCTGGGAGGTTCTCTTCTTTGAAGGTTATTTTGTGTGAAATTAAGAATCAGATGTTAAAAATCAATATGAAGAGTTTTTCTCATATCCCTAGATTACGTAACAATGTTGCTCATGAATTATTTAAGTGGGCATGGGATAACGAGGGAAGTGGGGAGTGGTATGTTAGCCCTCCCAAATAG
ATGGAGGGGGAGACTCTTGCTCTCCTCTTTGGGTTGAAGCTTGTCCAACGAATGTGCATCTCTATTGTTCATGTGGAGATCGATTACGAGGCTTTGGTCAATATTATTAAGAAGGATTCTGGGAGGTTCTCTTCTTTGAAGGTTATTTTGTGTGAAATTAAGAATCAGATGTTAAAAATCAATATGAAGAGTTTTTCTCATATCCCTAGATTACGTAACAATGTTGCTCATGAATTATTTAAGTGGGCATGGGATAACGAGGGAAGTGGGGAGTGGTATGTTAGCCCTCCCAAATAG
MEGETLALLFGLKLVQRMCISIVHVEIDYEALVNIIKKDSGRFSSLKVILCEIKNQMLKINMKSFSHIPRLRNNVAHELFKWAWDNEGSGEWYVSPPK
Homology
BLAST of HG10020259 vs. NCBI nr
Match:
TXG73320.1 (hypothetical protein EZV62_001899 [Acer yangbiense])
HSP 1 Score: 59.3 bits (142), Expect = 2.1e-05
Identity = 32/94 (34.04%), Postives = 52/94 (55.32%), Query Frame = 0
BLAST of HG10020259 vs. ExPASy TrEMBL
Match:
A0A5C7IVJ7 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001899 PE=4 SV=1)
HSP 1 Score: 59.3 bits (142), Expect = 1.0e-05
Identity = 32/94 (34.04%), Postives = 52/94 (55.32%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
TXG73320.1 2.1e-05 34.04 hypothetical protein EZV62_001899 [Acer yangbiense] [more]
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A5C7IVJ7 1.0e-05 34.04 RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001899 ... [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
A T G G A G G G G G A G A C T C T T G C T C T C C T C T T T G G G T T G A A G C T T G T C C A A C G A A T G T G C A T C T C T A T T G T T C A T G T G G A G A T C G A T T A C G A G G C T T T G G T C A A T A T T A T T A A G A A G G A T T C T G G G A G G T T C T C T T C T T T G A A G G T T A T T T T G T G T G A A A T T A A G A A T C A G A T G T T A A A A A T C A A T A T G A A G A G T T T T T C T C A T A T C C C T A G A T T A C G T A A C A A T G T T G C T C A T G A A T T A T T T A A G T G G G C A T G G G A T A A C G A G G G A A G T G G G G A G T G G T A T G T T A G C C C T C C C A A A T A G 50 100 150 200 250 Expect = 2.5E-8 / Score = 36.0 Expect = 1.2E-13 / Score = 51.0 Expect = 5.40465E-11 / Score = 52.7016 Score = Sequence G3DSA:3.30.420.10 PF13456 cd06222 SSF53098
IPR Term IPR Description Source Source Term Source Description Alignment
IPR036397 Ribonuclease H superfamily GENE3D 3.30.420.10 coord: 1..86 IPR002156 Ribonuclease H domain PFAM PF13456 RVT_3 coord: 2..83 IPR044730 Ribonuclease H-like domain, plant type CDD cd06222 RNase_H_like coord: 2..79 IPR012337 Ribonuclease H-like superfamily SUPERFAMILY 53098 Ribonuclease H-like coord: 3..85
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category
Term Accession
Term Name
molecular_function
GO:0003676 nucleic acid binding
molecular_function
GO:0004523 RNA-DNA hybrid ribonuclease activity
