HG10019548 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10019548
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Location	Chr04: 23059605 .. 23066674 (-)
RNA-Seq Expression	HG10019548
Synteny	HG10019548

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGGTGAGAGGGGAGTTATAATGTGTAGTCAGGTTAACCATCAAATATTGCAACCAAATTTCTCTCTCTCTAACCTAAACACGTTCAGAAACTCTTTTTTTCTAACACCTTTCTTACTTTTTCAAATTTTAATTGTCTCACTAAAAAAAAAATCATTTTATTCTTCATTCGAGTGCCTCCAATCTCACATTTACCTAATATAATTTTTTATATTCAACTACAATTTTAAAATTTAAACTTTTAGTTTTGTTTGAATCTATTTTTTTTTCAAAATTTAAAATAGTAAAAATTTGCGGAAAAATTTTTGTTGGAATTTTTTTGTAATTAAATTTTTTTCAGTAAATAAAATTATTAAGTGAAATTTTCCGTAAGCATAGGAAAATGAGAAAATTTCCGTAAGTTTAATAGGAATTGGTTAAAAAAAATTAAACTAAAGTTTATGGAATTGGAATTGGTTAACTTAAATTAATGTTAAAAAAAATTAAAATTAGTTCAAGTTAAAAAATGGAATTGGCTAAAAAATTAAACTAAATTACACTTACCGGGAAAAAAATTGGAATTGGGTAAAAAAAAAATTAAACTAACTGAAGTTTAAGTTTTTAAAAAATGGAATTGGCTAAAAAAAAAAAAAATTATTGAAAAATTTCCTGGTAAGATCATAAACTAACTTCAAATCTAATTTATAAAATTTAATAAAAAAAAATCAAGCAATTTCAATTTCTTGTAAGGATGCTTATCAGAAATTTAACGGTAAGCTTTTGTTTTTTTTAAAAAAAAATTTAAAATTAAATTTTAAGTGAGTTAGGAACTTACCATATAAAATTCATAAGTTTTATTTTTTAAAAAAAAAATCTAATTTGTAAAATAAAAAAAATAAAAAAGCTCGAAAATTTCGTGGTAATAATCTTGATGGGAAATTCAATTTCCCATAAAGATGTTTGTTTACATGAGATTTCCGGAGAAACGTGTTTCGTGGGTTTATGTAAATTTGATGCGGATGTGGTTCGATCTCTAGTATTTGATCCTCTGATTCTCTCTCGACTGAATGTGTATTTGATCCTCTGATTCTCTCTCGACTGAATGTGTACGCTTGGAAGTGAAGTTGAAGTGTTGGAGAAAAGCACGGATGAAGTTGAAGGGTTGGAGAAATGTATGTGTTCCAAGAACTTTCAAATGTGGTTCAGCTTCAGGACGGGAGAATTCTCTCTACACTCTCTGAGTGTAAATTTTCTGAAGAACTCCTCTATTTATAGAGTTGTTAGGTGGGCTTTGTGAGCTTCGTTGATCCATGGACCTGGCCTTTAGGCTTAGTTGGGCCTTTGCTGACATTTGGGTCAAATTAAGTCTATTTTTAGACTCAATTGGATTGTAGCTCAAACATTAACAATTAATTGAACTAAAAATAATTATTTTGATCCAACAATGTACACGAAAACACTTGGCACCATCAGAATTTGCCAATTTACGTTCTCAATTTCAATTTGGGACACATAGTAATTTTTAATTATTCCCAAATTCAATTATTTCTAATTTTGCTATTAATTTGATAAATGACGTAACAATTTGTGATTGGTCCAAAATTTCTCATTCAACCATGTTTACCAGCAAATTTTACAATAAGATTTTTAATTTTTTCTACAATTTTTAAAAAAAATCTAATTTGTAAGAAAAAAAAAACTTACCACAAAATTTTACTTGTTTTTTTTTTTTAAATTACAAATTAGATTTTAAATTAGTTAGGATCTTATATATATATATATATATATATATGAAAAAAAAAAACTTAGAAAATTTTCTGAAAAGCATTTACAAAAATTGTAAAGATGATTTCCAGTAAATTTTTCAGTAAGTTTTTTATTTGAAAAAAAAATTGATTTTTAGTTAGTTAGGATTTTATCAAAAAATTTTTTTTTCTTTTTTTAGCTAGTTCCGTTTTTTTTTTACCCATTTTTAATTTTAATTTTAATTTTTCTACGTTTAAGTTAGTTTAATTCTTTTAGCGAATTTCACTTTGTTTTTAAAACTTAAACCAATTCTAATGGTTTAACTTAAATTTAAGTTAATTAGTTGAAGTTAACCGATTCCAATTCCATAAGCTTTAGTTTAATTTTTTTTAACCCATTCCAATTAAACTTACGGAAATTTTCCCATCTTCCAATGCTTATAGCAAATTTCACATAATAATTTTTAAAATTATATCCTAAGGAGACTTTTTTTTCCAAATTTTTTTCTTTAAAAATAATAACAAATCTACCGTTTAAAACTTTGCAAAAACATGGAGACAAATAAAACTAAAATTTTTAAAACTAAAGTTGAGTATAAAAAATTTATTAAGTTAAGATGAAATTGCAAGCACTTGATTGAGGGGCAAAATGATATTTTCATTATGTAGGGTCCTCCACTTAAAATCTGAAGAAGTAAGAAATAGATTAGAAAAAGAAATTTTTGAAAGAGGGTTAGTTTTGTCCATTCAAAACCATTTTAGATTAGAAATAACAATTTCTGAGATTACTGTAACTATAATTTTTAAAATAATGGTTTGCAACAATACTTTAGAAAAACCCACTATTAGTGTTTGATAAATTTCAAACTTAGAAATAAAAAGGTAGGTAACAACGTTTACTAAGTTTAAACTAAATTTATTGTAACTTAGTTGTAATAACTGAAATGGGACATATGATTTTAATTATTTATATGTCGATATTTAATATATGAATGAAAAATTACTATAAATAGAAAAAAATATCAAACTATTTATAAATATAGAAAAATTTTACTATCTATCAGTAATAAACTGCGATAGAATTCTATGGCTTGAGCGATAGAATGCTGATAGACAGTAAAATTTTTCTATACTTGTAAATAGTTTAACTCATTTGAAAACAACCCTATATGAATTTTATAAGTTGATTATTTATAATTTTTATAGTTTAAATTACAAATATAGTTTATATTTTTTTTTAATAAAAGGATAGAAAAATTCATTGTTATATAAAATTGAAAGGAACAAATATCATTCCAATTTAAGTAATAATTTTATTATAAATTAAACAAGTTTAGGAAAACAACTGTTATATAAATTATGTTTAATTAGTCCAAATTTTATTGATATAAGATGAAATAGATATAAAAATATATATATAAATTTGAAACCATTAGTTAGAAAATATAACAAATGTTTAGAAAAATTGCTTTTAAAAGTTAGTTTGCAGGTGATTTTGAACCTAAAAGTGATTTTAAAAGAATTACGGAATTATTTGTTTTAACAAAGAGTCATCCAAAATCACTTTTGTCATTTTTAAAATTACTATAAAACATGTTTTTAATCATTCAAAACTAATTTTGATGTTTAGAAAGTGGATTTAAAAGTGTAAAATTGAAAACTAAATTAATTTTGAGTGATTAGAAATATATTTTTGAATAATTTTAAAAATGACAAAAATAATTTTGACGATTTTAAAATCACTTCAAACCCTTCTAACAAGTCAAGAGAATTGCTTTTGACATCCAAAGAAATCTTAGTTTAATTTGTCTGACAGCTTCTGTAAATATCCTTCATTTTTGTTGGTGGTGGTTGCCTGATTTTTGCATTTTTGTTTAAAAAAAAAAAAGAAAAACTGTCGGTTGCATCTCTCTCGTTAGGGCCAACCTAGAACAGCATCAAATTAATGTTTATTAATTTTTTTTTTTTGAAAAATATGTACATTATTAATTTGTTCATATGTTACGGGATATGTTTATTATAATTTTGACACCAAAGTTATGAGTCATTATTGTTTTACATTTTATTTTAATAGATCCATAATTTAGGAACATATCTATTTAATTTTGTATTTTATAACACCATTACCTTTAAATATGATAAGGATTTATTATATTCAACATTGAAAATCTACATACTTATTATTGTAGACCCCAAAATCTGTTCGATATTTTATTTCATTATTCTTATTCTTGTTAATTTTTGTGATATTCGTTATAATTTAGAATTGATTAGCTTTTTAAGATAAAATAAATAAACAAAAAATAAATTTTTGAGTAATTAATTAATATTGAAATGTTTTCCTTTTGGGTTTTTATTAAATAAAATAAAAAAAAATTTGTGTGGAGAGAATAAAATTTTGAAGGTTCAAATCTCATTTTACATTCATTCATCTACGTATAAAAATTTTCAATGTTTATTTTATGAAAATTATGCTTTTATCCATATAATATATAATTGGTTTAGTGTTAAAATAAAAAGAGAGTCTTTTCCAATTATTAGAAATGTAGATTTATGTCATTTTAGTTGTGACATGGAGTTCTGATGTTCTCAAATGTTATTTTTATGAAGGGTATGTTTACACTTTTTTTTTTTTTTTTTTTTTTTATGTATTTTTGTTATTTCTATTTTATTTGAGAATGATTATGCACTTTCTTTTGAGTTAATATTAGCTCTTATTTTGAAGTAAAAAGTTTTTTCAATGATGGAGCCCCAAACTTTTGAAAGACCGTTATTTGAGATTCTTGAGGTGAAATGTTAACTTCTTGAAAAGTCGATGATTTGATTTTAAAAGATTACCTTGATTTAAAAAAAGGGGACTTTTAAAAAATAGAAAAATAAGGGAAAATATTTACACAAAATAGCAAATTTTTTAAATAGTTGTGATAGATGCCGATAGATGTCTATCAGAGTCTATCAGTAATTGAAATGATAGGAGTCTATCACTGATATATGCTGATAGAAGTCTATCAATGTCTATCAATATTTTTTTTTTTGCTATTTTTATGTAAATAGTTTGACATTTTTTATATCTATAAAAATTTCTCTAAAAAAAATAATAATAACCGTGTAATTTTAATGAAGATACTTCGCTTTTTTTAAATAAAACCTCCCAAAATAGTTGATTTCATCAAAATTTATTTTCCATTAAAAAAAATAATAAAGATCATTTTAAAAGTTTTCCTTTCATATTTTTTTTTTTAAAAAATAAACTAAATTAGAATTAATTTGGTAAATAATACTTTGAAAAATTTTCACAAATAAAAAAATGTCAAACTATTTACAGAAAATAGTAAAAAAATACTGATAGACATTGATAGACTTCTATCAGCATCTATCAGTGATAGACTTCTATAATTTCTATCACTGATAGATCCTAATAGACTTCTATCAGTGTCTATCACAACTATATAAAAATTTTGCTATTTTGTATAAATAGTTTTTCTTATTTTTCTATTTTTAAAATTTTCCCTAATACTTTCCTCAAAAGATTAAAAAGAAAAGTTTTCTTACAAAAGATGTTCATGGTTTTTTTAAAAATAAAATATAAAACTTTCCTATAACGGAAAATAAAATGTATGACAAAAAGTCCATACATCCAATTAATATCACATTTTTACTGAAGTTAATTATTAATATTGTATACATATACTTTTTTTTCCTTCCAATCTTTAATTAACTAAATATAAAATAAAGAATTGAATTATCTATAATTATAATTATTATATGTAAATAAGTAATTGAAACGGTAATTTTGGACATAAATTGTATTGATTATGCTTAATAGGCTATAAATTATCTTAACTCAAATTTCCAAAGGATTCTAAAAATTTAAATAATTTACTATACTAGTTTATCTAAATTAACAAAAGCATAATAACAATATAAAATTACAAAAAATACTCTTAACAATAATGCGAGGCTTTACATTATTTATAGTTTAAAAACTTAATAGACATAATTTGTATTGTTTTTAAAAAATAGAGTTGTTTTGAAATTTATTATTCAAATATTGTAGTTTTATTTAAAAAAATGTTTGAAGGTGGTTGAACAACTTTGTACGTTCTTTAGTATAAGTTTTGAAATTTGTTTTCTCAAATATGTTGAAGAGTGAATCATGCATTTGTAAATAAAACAAAAATATTCTCTACAACATAAAATGAAAATTGTGCCCATCATAAATTTCTAACCACCAAGATTCTCTATCATTGAAATGTTTCATATGTGAATTGTCCTTTCATAACTAACTCGTTCATTTGAGTTCTACAAGAAAAGAGCTTTCCTATCTCACCAATAGAGACAATCAATATTCTCAACGACATGGCATTATGTTGGCTATGGACTTGATGAATTACGCACGATCGAAGAAGATATCGACGGCAAATCGATAATGGGCCAATGTAGACCCACTGATGAATTCACTGAATACAAATCGAAGAACCTTCATGCAGAAAGACGACGGAGGCAGAAGCTTAGCGATAAGCTATTATTACTACGTGGCACTGTTCCGATCATCACAAATGTAACATCTCAGAACTCTCTTCATTACTCCATTAATTTTTTAGGTGAACAATCTCAAAATGTAGCTTTATTTTACTATAGATGAATAAAGCAACCATTATCGACGATGCTATAACATACATCCAGCAGCTGCAGAAGACGGTTAACATTCTCAAAGACCAGCTTGTGGAATTGGAAGATTCATCTGCAAAAGTTGTCCTGTGGCCAACACCAAATGATAATATAGAATCGACACACTTAATTAAAACTTATGTTCAGGTTTGCATAATTATCTAATTAATTCCGCTCATATATATCTTATAGTATGTTTGGGATAAGTGATTTAAAAATGGTTAAAATCACTTAAAAAAATATTTTTAATAATTTGAAATCAATTTTAATAACATAAAAAAATGTGTTTAAAATTATAAAATTAAATATTAAATTAATTTTGAGTGATTAAAAATGTATTTTAAAGTGATTTTAAATGTTTCTCGTTTAATAACGTATGGATTATTATTGCTAAAAACAGGCAGACGTGAGGGTTTCTCAAATTGATGAACACAAATTCTGGATTAAAATGCTTTTCGAGAAGCGAAAAGGGGCATTGGCTAAATTAATTCAAGCATTGTATTCTCTTGGCTTTGAACTCATTGATTCGAGTGTCACAACCGTAAAAGGAACCGTCATTGTAACCAGCATTATCAATGTAAGTCCTTACAACAACAATTCCTCAATTGTAGCAAATATAAAAATGGTATTTAATTATATAATTAACAAGAATGACAAACTGCATAATGTTTAA

mRNA sequence

ATGCCGAGACAATCAATATTCTCAACGACATGGCATTATGTTGGCTATGGACTTGATGAATTACGCACGATCGAAGAAGATATCGACGGCAAATCGATAATGGGCCAATGTAGACCCACTGATGAATTCACTGAATACAAATCGAAGAACCTTCATGCAGAAAGACGACGGAGGCAGAAGCTTAGCGATAAGCTATTATTACTACGTGGCACTGTTCCGATCATCACAAATATGAATAAAGCAACCATTATCGACGATGCTATAACATACATCCAGCAGCTGCAGAAGACGGTTAACATTCTCAAAGACCAGCTTGTGGAATTGGAAGATTCATCTGCAAAAGTTGTCCTGTGGCCAACACCAAATGATAATATAGAATCGACACACTTAATTAAAACTTATGTTCAGGCAGACGTGAGGGTTTCTCAAATTGATGAACACAAATTCTGGATTAAAATGCTTTTCGAGAAGCGAAAAGGGGCATTGGCTAAATTAATTCAAGCATTGTATTCTCTTGGCTTTGAACTCATTGATTCGAGTGTCACAACCGTAAAAGGAACCGTCATTGTAACCAGCATTATCAATGTAAGTCCTTACAACAACAATTCCTCAATTGTAGCAAATATAAAAATGGTATTTAATTATATAATTAACAAGAATGACAAACTGCATAATGTTTAA

Coding sequence (CDS)

ATGCCGAGACAATCAATATTCTCAACGACATGGCATTATGTTGGCTATGGACTTGATGAATTACGCACGATCGAAGAAGATATCGACGGCAAATCGATAATGGGCCAATGTAGACCCACTGATGAATTCACTGAATACAAATCGAAGAACCTTCATGCAGAAAGACGACGGAGGCAGAAGCTTAGCGATAAGCTATTATTACTACGTGGCACTGTTCCGATCATCACAAATATGAATAAAGCAACCATTATCGACGATGCTATAACATACATCCAGCAGCTGCAGAAGACGGTTAACATTCTCAAAGACCAGCTTGTGGAATTGGAAGATTCATCTGCAAAAGTTGTCCTGTGGCCAACACCAAATGATAATATAGAATCGACACACTTAATTAAAACTTATGTTCAGGCAGACGTGAGGGTTTCTCAAATTGATGAACACAAATTCTGGATTAAAATGCTTTTCGAGAAGCGAAAAGGGGCATTGGCTAAATTAATTCAAGCATTGTATTCTCTTGGCTTTGAACTCATTGATTCGAGTGTCACAACCGTAAAAGGAACCGTCATTGTAACCAGCATTATCAATGTAAGTCCTTACAACAACAATTCCTCAATTGTAGCAAATATAAAAATGGTATTTAATTATATAATTAACAAGAATGACAAACTGCATAATGTTTAA

Protein sequence

MPRQSIFSTTWHYVGYGLDELRTIEEDIDGKSIMGQCRPTDEFTEYKSKNLHAERRRRQKLSDKLLLLRGTVPIITNMNKATIIDDAITYIQQLQKTVNILKDQLVELEDSSAKVVLWPTPNDNIESTHLIKTYVQADVRVSQIDEHKFWIKMLFEKRKGALAKLIQALYSLGFELIDSSVTTVKGTVIVTSIINVSPYNNNSSIVANIKMVFNYIINKNDKLHNV

Homology

[Close]

BLAST of HG10019548 vs. NCBI nr
Match: XP_022930020.1 (transcription factor DYT1 [Cucurbita moschata])

HSP 1 Score: 242.3 bits (617), Expect = 4.1e-60
Identity = 131/184 (71.20%), Postives = 148/184 (80.43%), Query Frame = 0


Query: 13  YVGYGLDELRTIEEDIDGKSIMGQCRPTDEFTEYKSKNLHAERRRRQKLSDKLLLLRGTV 72
           Y   G D+LRT EE  D +SI  + RPTDE  EYKSKNLHAERRRRQKLSD+LLLLR TV
Sbjct: 3   YASSGSDDLRTFEEQADTRSITNRRRPTDESIEYKSKNLHAERRRRQKLSDRLLLLRATV 62

Query: 73  PIITNMNKATIIDDAITYIQQLQKTVNILKDQLVELEDSSAKVVLWPT-PNDNIESTHLI 132
           PIITNMNKATII+DAITYI+QLQK VNILKDQLVELE S+ K   WPT P D+   T   
Sbjct: 63  PIITNMNKATIIEDAITYIKQLQKRVNILKDQLVELEGSAEKTP-WPTIPQDSTTPTQSN 122

Query: 133 KTYVQADVRVSQIDEHKFWIKMLFEKRKGALAKLIQALYSLGFELIDSSVTTVKGTVIVT 192
           K Y+QADV VSQIDEHK WIK+LFEKRKGA  KLIQA+ S+GFEL D+SVTTV+G V+VT
Sbjct: 123 KGYIQADVSVSQIDEHKLWIKILFEKRKGAFTKLIQAMNSVGFELTDTSVTTVQGAVLVT 182

Query: 193 SIIN 196
           ++IN
Sbjct: 183 TLIN 185

[Close]

BLAST of HG10019548 vs. NCBI nr
Match: XP_022146507.1 (transcription factor DYT1, partial [Momordica charantia])

HSP 1 Score: 221.9 bits (564), Expect = 5.7e-54
Identity = 123/183 (67.21%), Postives = 143/183 (78.14%), Query Frame = 0


Query: 13  YVGYGLDELRTIEEDIDGKSIMGQCRPTDEFTEYKSKNLHAERRRRQKLSDKLLLLRGTV 72
           +VG+  DELR IEE+    SI GQ R TDE  +YKSKNLHAERRRRQKLSD+LLLLR T 
Sbjct: 3   FVGFQPDELRMIEEESGSSSIKGQRRSTDESAKYKSKNLHAERRRRQKLSDRLLLLRAT- 62

Query: 73  PIITNMNKATIIDDAITYIQQLQKTVNILKDQLVELEDSSAKVVLWPTPNDNIESTHLIK 132
                MNKATII+DAITYIQQLQ+ V+ILKDQLVELE SS K + WPTP D     ++ +
Sbjct: 63  -----MNKATIIEDAITYIQQLQQKVDILKDQLVELEASSEKNI-WPTPRDIEAPINIKR 122

Query: 133 TYVQADVRVSQIDEHKFWIKMLFEKRKGALAKLIQALYSLGFELIDSSVTTVKGTVIVTS 192
           +Y+QADVRV+QIDE K W+K+LFEK+KGA  KLIQ L S GFELID SVTTVKG V+VT+
Sbjct: 123 SYIQADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTT 178

Query: 193 IIN 196
           IIN
Sbjct: 183 IIN 178

[Close]

BLAST of HG10019548 vs. NCBI nr
Match: XP_042943746.1 (transcription factor DYT1-like [Carya illinoinensis] >KAG6642638.1 hypothetical protein CIPAW_09G153700 [Carya illinoinensis] >KAG6696555.1 hypothetical protein I3842_09G153600 [Carya illinoinensis])

HSP 1 Score: 171.8 bits (434), Expect = 6.8e-39
Identity = 94/179 (52.51%), Postives = 127/179 (70.95%), Query Frame = 0


Query: 18  LDELRTIEEDIDGKSIMG-QCRPTDEFTEYKSKNLHAERRRRQKLSDKLLLLRGTVPIIT 77
           LDE   IEE       MG +    D+ TEYKSKNLHAERRRRQKLSD+LL LR  VP+IT
Sbjct: 8   LDEFCKIEEGSTSTGRMGRRSYSNDDTTEYKSKNLHAERRRRQKLSDRLLKLRALVPLIT 67

Query: 78  NMNKATIIDDAITYIQQLQKTVNILKDQLVELEDSSAKVVLWPTPNDNIESTHLIK-TYV 137
           NMNKATII+DAITYIQ+LQK V IL++QL ELE SS++V   P     +E+   +K + +
Sbjct: 68  NMNKATIIEDAITYIQELQKNVKILQEQLCELEASSSEVGANPASEVKVEAAEEMKESGI 127

Query: 138 QADVRVSQIDEHKFWIKMLFEKRKGALAKLIQALYSLGFELIDSSVTTVKGTVIVTSII 195
           Q +  V++ID  K W+K++FEK++G    L++A+ S GFE I+++VTT KG ++V+S +
Sbjct: 128 QVEAEVTEIDRDKLWVKIIFEKKRGGFTTLMEAMSSFGFEFINTNVTTFKGAMLVSSCV 186

[Close]

BLAST of HG10019548 vs. NCBI nr
Match: KAG2689688.1 (hypothetical protein I3760_09G150600 [Carya illinoinensis] >KAG6619421.1 hypothetical protein I3842_Q099800 [Carya illinoinensis])

HSP 1 Score: 171.4 bits (433), Expect = 8.9e-39
Identity = 94/179 (52.51%), Postives = 127/179 (70.95%), Query Frame = 0


Query: 18  LDELRTIEEDIDGKSIMG-QCRPTDEFTEYKSKNLHAERRRRQKLSDKLLLLRGTVPIIT 77
           LDE   IEE       MG +    D+ TEYKSKNLHAERRRRQKLSD+LL LR  VP+IT
Sbjct: 8   LDEFCKIEEGSTSTGRMGRRSYSNDDTTEYKSKNLHAERRRRQKLSDRLLKLRALVPLIT 67

Query: 78  NMNKATIIDDAITYIQQLQKTVNILKDQLVELEDSSAKVVLWPTPNDNIESTHLIK-TYV 137
           NMNKATII+DAITYIQ+LQK V IL++QL ELE SS++V   P     +E+   +K + +
Sbjct: 68  NMNKATIIEDAITYIQELQKNVKILQEQLCELEASSSEVGANPASEVKVEAAEEMKESGI 127

Query: 138 QADVRVSQIDEHKFWIKMLFEKRKGALAKLIQALYSLGFELIDSSVTTVKGTVIVTSII 195
           Q +  V++ID  K W+K++FEK++G    L++A+ S GFE I+++VTT KG ++V+S +
Sbjct: 128 QVEAEVTEIDRDKLWVKIIFEKKRGGFTTLMEAMSSFGFEFINTNVTTSKGAMLVSSCV 186

[Close]

BLAST of HG10019548 vs. NCBI nr
Match: KAG7964044.1 (hypothetical protein I3843_09G148800 [Carya illinoinensis])

HSP 1 Score: 169.9 bits (429), Expect = 2.6e-38
Identity = 93/179 (51.96%), Postives = 127/179 (70.95%), Query Frame = 0


Query: 18  LDELRTIEEDIDGKSIMG-QCRPTDEFTEYKSKNLHAERRRRQKLSDKLLLLRGTVPIIT 77
           LDE   IEE       MG +    D+ TEYKSKNLHAERRRRQKLSD+LL LR  VP+IT
Sbjct: 8   LDEFCKIEEGSTSTERMGRRSYSNDDTTEYKSKNLHAERRRRQKLSDRLLKLRALVPLIT 67

Query: 78  NMNKATIIDDAITYIQQLQKTVNILKDQLVELEDSSAKVVLWPTPNDNIESTHLIK-TYV 137
           NMNKATII+DAITYIQ+LQK V IL++QL ELE SS++V   P     +E+   +K + +
Sbjct: 68  NMNKATIIEDAITYIQELQKNVKILQEQLCELEASSSEVGANPASEVKVEAAEEMKESGI 127

Query: 138 QADVRVSQIDEHKFWIKMLFEKRKGALAKLIQALYSLGFELIDSSVTTVKGTVIVTSII 195
           + +  V++ID  K W+K++FEK++G    L++A+ S GFE I+++VTT KG ++V+S +
Sbjct: 128 KVEAEVTEIDRDKLWVKIIFEKKRGGFTTLMEAMSSFGFEFINTNVTTSKGAMLVSSCV 186

[Close]

BLAST of HG10019548 vs. ExPASy Swiss-Prot
Match: O81900 (Transcription factor DYT1 OS=Arabidopsis thaliana OX=3702 GN=DYT1 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.8e-24
Identity = 61/161 (37.89%), Postives = 102/161 (63.35%), Query Frame = 0


Query: 41  DEFTEYKSKNLHAERRRRQKLSDKLLLLRGTVPIITNMNKATIIDDAITYIQQLQKTVNI 100
           +E   +KS NL AERRRR+KL  +L+ LR  VPI+TNM KA+I++DAITYI +LQ  V  
Sbjct: 24  EEDENFKSPNLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKN 83

Query: 101 LKDQLVELEDSSAKV-------VLWPTPNDNIESTHLIKTYVQADVRVSQIDEHKFWIKM 160
           L +   E+E++  ++       ++ P    +  +  + K  ++ +V++ +I E KFW+K+
Sbjct: 84  LLETFHEMEEAPPEIDEEQTDPMIKPEVETSDLNEEMKKLGIEENVQLCKIGERKFWLKI 143

Query: 161 LFEKRKGALAKLIQALYSLGFELIDSSVTTVKGTVIVTSII 195
           + EKR G   K ++ +  LGFE+ID S+TT  G +++++ +
Sbjct: 144 ITEKRDGIFTKFMEVMRFLGFEIIDISLTTSNGAILISASV 184

[Close]

BLAST of HG10019548 vs. ExPASy Swiss-Prot
Match: Q9ZVX2 (Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana OX=3702 GN=AMS PE=1 SV=2)

HSP 1 Score: 76.3 bits (186), Expect = 5.1e-13
Identity = 63/197 (31.98%), Postives = 104/197 (52.79%), Query Frame = 0


Query: 47  KSKNLHAERRRRQKLSDKLLLLRGTVPIITNMNKATIIDDAITYIQQLQKTVNILKDQL- 106
           ++KNL AERRRR+KL+D+L  LR  VP IT +++A+I+ DAI Y+++LQ     L+D+L 
Sbjct: 312 QAKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELE 371

Query: 107 --VELEDSSAK----------VVLWPTP----NDNI---------ESTHLIKTYVQADVR 166
              E ED S +          VV    P    N N+         E+++     ++  V 
Sbjct: 372 ENSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQVD 431

Query: 167 VSQIDEHKFWIKMLFEKRKGALAKLIQALYSLGFELIDSSVTTVKGTVIVTSIINVSPYN 218
           V+Q+D  +F++K++ E + G   +L++AL SLG E     VT    T  ++ + NV    
Sbjct: 432 VAQLDGREFFVKVICEYKPGGFTRLMEALDSLGLE-----VTNANTTRYLSLVSNVFKVE 491

[Close]

BLAST of HG10019548 vs. ExPASy Swiss-Prot
Match: Q2HIV9 (Transcription factor bHLH35 OS=Arabidopsis thaliana OX=3702 GN=BHLH35 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.8e-11
Identity = 58/187 (31.02%), Postives = 93/187 (49.73%), Query Frame = 0


Query: 24  IEEDIDGKSIMGQCRPTDEFTEYKSKNLHAERRRRQKLSDKLLLLRGTVPIITNMNKATI 83
           +EE I G        P    +   SKN+ +ER RRQKL+ +L  LR  VP IT M+KA+I
Sbjct: 32  LEEAISGS--YDSSSPDGAASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASI 91

Query: 84  IDDAITYIQQLQKTVNILKDQLVELEDSSA----------KVVLWPTPN------DNIES 143
           I DAI+YI+ LQ     L+ ++ ELE +            + +L P  +      D+  S
Sbjct: 92  IKDAISYIEGLQYEEKKLEAEIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSS 151

Query: 144 THLIKTYVQADVRVSQIDEHKFWIKMLFEKRKGALAKLIQALYSLGFELIDSSVTTVKGT 195
           T LI+     +++V+ + E    + +   KR   + KL +   SL  +++ S++T+  G 
Sbjct: 152 TSLIEV---LELKVTFMGERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGM 211

[Close]

BLAST of HG10019548 vs. ExPASy Swiss-Prot
Match: Q0V7X4 (Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR OS=Arabidopsis thaliana OX=3702 GN=FIT PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.4e-10
Identity = 47/146 (32.19%), Postives = 80/146 (54.79%), Query Frame = 0


Query: 47  KSKNLHAERRRRQKLSDKLLLLRGTVPIITNMNKATIIDDAITYIQQLQKTVNILKDQLV 106
           +S+ L +ERRRR ++ DKL  LR  VP IT M+KA+I+ DA+ Y+Q+LQ     LK  + 
Sbjct: 129 RSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDIA 188

Query: 107 ELEDSSAKVVLWPTPNDNIESTH--------LIKTYVQADVRVSQIDEHKFWIKMLFEKR 166
            LE S      +     + + T           K  +Q D  V Q++E  F+++++  K 
Sbjct: 189 GLEASLNSTGGYQEHAPDAQKTQPFRGINPPASKKIIQMD--VIQVEEKGFYVRLVCNKG 248

Query: 167 KGALAKLIQALYSL-GFELIDSSVTT 184
           +G    L ++L SL  F++ +S++++
Sbjct: 249 EGVAPSLYKSLESLTSFQVQNSNLSS 272

[Close]

BLAST of HG10019548 vs. ExPASy Swiss-Prot
Match: Q6YUS3 (Transcription factor TDR OS=Oryza sativa subsp. japonica OX=39947 GN=TDR PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.4e-10
Identity = 58/208 (27.88%), Postives = 95/208 (45.67%), Query Frame = 0


Query: 25  EEDIDGKSIMGQCRPTDEFTEYKSKNLHAERRRRQKLSDKLLLLRGTVPIITNMNKATII 84
           E+D DG+   G  +        + KNL AER+RR+KL+  L  LR  VP IT M++A+I+
Sbjct: 267 EDDGDGEGRSGGAK------RQQCKNLEAERKRRKKLNGHLYKLRSLVPNITKMDRASIL 326

Query: 85  DDAITYIQQLQKTVNILKDQLVE----------LEDSSAKVVLWPTPNDNIESTHLIKTY 144
            DAI YI  LQK V  L+D+L +          L D      L    ND+    +  +  
Sbjct: 327 GDAIDYIVGLQKQVKELQDELEDNHVHHKPPDVLIDHPPPASLVGLDNDDASPPNSHQQQ 386

Query: 145 ---------------------------------VQADVRVSQIDEHKFWIKMLFEKRKGA 190
                                            ++  + V Q+  ++ ++++L+E + G 
Sbjct: 387 PPLAVSGSSSRRSNKDPAMTDDKVGGGGGGGHRMEPQLEVRQVQGNELFVQVLWEHKPGG 446

[Close]

BLAST of HG10019548 vs. ExPASy TrEMBL
Match: A0A6J1EVV3 (transcription factor DYT1 OS=Cucurbita moschata OX=3662 GN=LOC111436461 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 2.0e-60
Identity = 131/184 (71.20%), Postives = 148/184 (80.43%), Query Frame = 0


Query: 13  YVGYGLDELRTIEEDIDGKSIMGQCRPTDEFTEYKSKNLHAERRRRQKLSDKLLLLRGTV 72
           Y   G D+LRT EE  D +SI  + RPTDE  EYKSKNLHAERRRRQKLSD+LLLLR TV
Sbjct: 3   YASSGSDDLRTFEEQADTRSITNRRRPTDESIEYKSKNLHAERRRRQKLSDRLLLLRATV 62

Query: 73  PIITNMNKATIIDDAITYIQQLQKTVNILKDQLVELEDSSAKVVLWPT-PNDNIESTHLI 132
           PIITNMNKATII+DAITYI+QLQK VNILKDQLVELE S+ K   WPT P D+   T   
Sbjct: 63  PIITNMNKATIIEDAITYIKQLQKRVNILKDQLVELEGSAEKTP-WPTIPQDSTTPTQSN 122

Query: 133 KTYVQADVRVSQIDEHKFWIKMLFEKRKGALAKLIQALYSLGFELIDSSVTTVKGTVIVT 192
           K Y+QADV VSQIDEHK WIK+LFEKRKGA  KLIQA+ S+GFEL D+SVTTV+G V+VT
Sbjct: 123 KGYIQADVSVSQIDEHKLWIKILFEKRKGAFTKLIQAMNSVGFELTDTSVTTVQGAVLVT 182

Query: 193 SIIN 196
           ++IN
Sbjct: 183 TLIN 185

[Close]

BLAST of HG10019548 vs. ExPASy TrEMBL
Match: A0A6J1CZR8 (transcription factor DYT1 OS=Momordica charantia OX=3673 GN=LOC111015710 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 2.8e-54
Identity = 123/183 (67.21%), Postives = 143/183 (78.14%), Query Frame = 0


Query: 13  YVGYGLDELRTIEEDIDGKSIMGQCRPTDEFTEYKSKNLHAERRRRQKLSDKLLLLRGTV 72
           +VG+  DELR IEE+    SI GQ R TDE  +YKSKNLHAERRRRQKLSD+LLLLR T 
Sbjct: 3   FVGFQPDELRMIEEESGSSSIKGQRRSTDESAKYKSKNLHAERRRRQKLSDRLLLLRAT- 62

Query: 73  PIITNMNKATIIDDAITYIQQLQKTVNILKDQLVELEDSSAKVVLWPTPNDNIESTHLIK 132
                MNKATII+DAITYIQQLQ+ V+ILKDQLVELE SS K + WPTP D     ++ +
Sbjct: 63  -----MNKATIIEDAITYIQQLQQKVDILKDQLVELEASSEKNI-WPTPRDIEAPINIKR 122

Query: 133 TYVQADVRVSQIDEHKFWIKMLFEKRKGALAKLIQALYSLGFELIDSSVTTVKGTVIVTS 192
           +Y+QADVRV+QIDE K W+K+LFEK+KGA  KLIQ L S GFELID SVTTVKG V+VT+
Sbjct: 123 SYIQADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTT 178

Query: 193 IIN 196
           IIN
Sbjct: 183 IIN 178

[Close]

BLAST of HG10019548 vs. ExPASy TrEMBL
Match: A0A7N2LV27 (BHLH domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 5.3e-37
Identity = 92/182 (50.55%), Postives = 126/182 (69.23%), Query Frame = 0


Query: 13  YVGYGLDELRTIEEDIDGKSIMGQCRPTDEFTEYKSKNLHAERRRRQKLSDKLLLLRGTV 72
           YVG  LD L   +E      +  +    D+ TEYKSKNLHAERRRRQKLSD+LL LR  V
Sbjct: 3   YVGSALDGLFITKEGNSRGRVGRRRYSNDDGTEYKSKNLHAERRRRQKLSDRLLALRALV 62

Query: 73  PIITNMNKATIIDDAITYIQQLQKTVNILKDQLVELEDSSAKVVLWPTPNDNIESTHLIK 132
           PIITNMNKATII+DAI+YI++L+  VN+L+  L E+E SS +  L P   +   +  + K
Sbjct: 63  PIITNMNKATIIEDAISYIEELKNNVNVLQGLLYEMEASSEEGAL-PRSEEIDPAEEMRK 122

Query: 133 TYVQADVRVSQIDEHKFWIKMLFEKRKGALAKLIQALYSLGFELIDSSVTTVKGTVIVTS 192
           + +QA+V V+QID  K WIK++F K++G   +LI+A+ + GFEL D+SVTT KG ++V+S
Sbjct: 123 SGIQAEVEVTQIDGKKLWIKIIFGKKRGGFTRLIEAMTAFGFELTDTSVTTSKGAMLVSS 182

Query: 193 II 195
            +
Sbjct: 183 CV 183

[Close]

BLAST of HG10019548 vs. ExPASy TrEMBL
Match: A0A5E4FTK1 (BHLH domain-containing protein OS=Prunus dulcis OX=3755 GN=ALMOND_2B006144 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.5e-36
Identity = 94/184 (51.09%), Postives = 126/184 (68.48%), Query Frame = 0


Query: 13  YVGYGLDELRTIEEDIDGKSIMGQCRPTDEFTEYKSKNLHAERRRRQKLSDKLLLLRGTV 72
           +V   LDEL   E+   G  +  +    D+  EYKSKNLHAERRRRQKLS++LL LR  V
Sbjct: 3   FVASALDELCITEQGKIGGRMGHRSHNNDD--EYKSKNLHAERRRRQKLSERLLTLRALV 62

Query: 73  PIITNMNKATIIDDAITYIQQLQKTVNILKDQLVELEDSSAKVVLWPTP-NDNIESTHLI 132
           P ITNMNKATI++DAITYI +LQKTVNILKDQL ++E S  +    P P  + I S   +
Sbjct: 63  PNITNMNKATIVEDAITYIHELQKTVNILKDQLFDMEASEEEA---PEPKKEEIHSAEEM 122

Query: 133 KTY-VQADVRVSQIDEHKFWIKMLFEKRKGALAKLIQALYSLGFELIDSSVTTVKGTVIV 192
           K + +QA V V+QID +K W+K + EK++G   KL++A+ + GFEL D+SVTT  G ++V
Sbjct: 123 KKFGIQAGVNVTQIDGNKLWVKAILEKKRGGFTKLMEAMTAFGFELTDTSVTTSNGAMLV 181

Query: 193 TSII 195
           +S +
Sbjct: 183 SSCV 181

[Close]

BLAST of HG10019548 vs. ExPASy TrEMBL
Match: A0A251PGJ1 (BHLH domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_4G030600 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.5e-36
Identity = 94/184 (51.09%), Postives = 126/184 (68.48%), Query Frame = 0


Query: 13  YVGYGLDELRTIEEDIDGKSIMGQCRPTDEFTEYKSKNLHAERRRRQKLSDKLLLLRGTV 72
           +V   LDEL   E+   G  +  +    D+  EYKSKNLHAERRRRQKLS++LL LR  V
Sbjct: 3   FVASALDELCITEQGKIGGRMGHRSHNNDD--EYKSKNLHAERRRRQKLSERLLTLRALV 62

Query: 73  PIITNMNKATIIDDAITYIQQLQKTVNILKDQLVELEDSSAKVVLWPTP-NDNIESTHLI 132
           P ITNMNKATI++DAITYI +LQKTVNILKDQL ++E S  +    P P  + I S   +
Sbjct: 63  PNITNMNKATIVEDAITYIHELQKTVNILKDQLFDMEASEEEA---PEPKKEEIHSAEEM 122

Query: 133 KTY-VQADVRVSQIDEHKFWIKMLFEKRKGALAKLIQALYSLGFELIDSSVTTVKGTVIV 192
           K + +QA V V+QID +K W+K + EK++G   KL++A+ + GFEL D+SVTT  G ++V
Sbjct: 123 KKFGIQAGVNVTQIDGNKLWVKAILEKKRGGFTKLMEAMTAFGFELTDTSVTTSNGAMLV 181

Query: 193 TSII 195
           +S +
Sbjct: 183 SSCV 181

[Close]

BLAST of HG10019548 vs. TAIR 10
Match: AT4G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 113.2 bits (282), Expect = 2.7e-25
Identity = 61/161 (37.89%), Postives = 102/161 (63.35%), Query Frame = 0


Query: 41  DEFTEYKSKNLHAERRRRQKLSDKLLLLRGTVPIITNMNKATIIDDAITYIQQLQKTVNI 100
           +E   +KS NL AERRRR+KL  +L+ LR  VPI+TNM KA+I++DAITYI +LQ  V  
Sbjct: 24  EEDENFKSPNLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKN 83

Query: 101 LKDQLVELEDSSAKV-------VLWPTPNDNIESTHLIKTYVQADVRVSQIDEHKFWIKM 160
           L +   E+E++  ++       ++ P    +  +  + K  ++ +V++ +I E KFW+K+
Sbjct: 84  LLETFHEMEEAPPEIDEEQTDPMIKPEVETSDLNEEMKKLGIEENVQLCKIGERKFWLKI 143

Query: 161 LFEKRKGALAKLIQALYSLGFELIDSSVTTVKGTVIVTSII 195
           + EKR G   K ++ +  LGFE+ID S+TT  G +++++ +
Sbjct: 144 ITEKRDGIFTKFMEVMRFLGFEIIDISLTTSNGAILISASV 184

[Close]

BLAST of HG10019548 vs. TAIR 10
Match: AT2G16910.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 76.3 bits (186), Expect = 3.6e-14
Identity = 63/197 (31.98%), Postives = 104/197 (52.79%), Query Frame = 0


Query: 47  KSKNLHAERRRRQKLSDKLLLLRGTVPIITNMNKATIIDDAITYIQQLQKTVNILKDQL- 106
           ++KNL AERRRR+KL+D+L  LR  VP IT +++A+I+ DAI Y+++LQ     L+D+L 
Sbjct: 312 QAKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELE 371

Query: 107 --VELEDSSAK----------VVLWPTP----NDNI---------ESTHLIKTYVQADVR 166
              E ED S +          VV    P    N N+         E+++     ++  V 
Sbjct: 372 ENSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQVD 431

Query: 167 VSQIDEHKFWIKMLFEKRKGALAKLIQALYSLGFELIDSSVTTVKGTVIVTSIINVSPYN 218
           V+Q+D  +F++K++ E + G   +L++AL SLG E     VT    T  ++ + NV    
Sbjct: 432 VAQLDGREFFVKVICEYKPGGFTRLMEALDSLGLE-----VTNANTTRYLSLVSNVFKVE 491

[Close]

BLAST of HG10019548 vs. TAIR 10
Match: AT5G57150.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 72.8 bits (177), Expect = 4.0e-13
Identity = 60/190 (31.58%), Postives = 95/190 (50.00%), Query Frame = 0


Query: 24  IEEDIDGKSIMGQCRPTDEFTEYKSKNLHAERRRRQKLSDKLLLLRGTVPIITNMNKATI 83
           +EE I G        P    +   SKN+ +ER RRQKL+ +L  LR  VP IT M+KA+I
Sbjct: 32  LEEAISGS--YDSSSPDGAASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASI 91

Query: 84  IDDAITYIQQLQKTVNILKDQLVELEDSSA----------KVVLWPTPN------DNIES 143
           I DAI+YI+ LQ     L+ ++ ELE +            + +L P  +      D+  S
Sbjct: 92  IKDAISYIEGLQYEEKKLEAEIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSS 151

Query: 144 THLIKTYVQADVRVSQIDEHKFWIKMLFEKRKGALAKLIQALYSLGFELIDSSVTTVKGT 198
           T LI+     +++V+ + E    + +   KR   + KL +   SL  +++ S++T+  G 
Sbjct: 152 TSLIEV---LELKVTFMGERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGM 211

[Close]

BLAST of HG10019548 vs. TAIR 10
Match: AT5G57150.4 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 72.8 bits (177), Expect = 4.0e-13
Identity = 59/191 (30.89%), Postives = 95/191 (49.74%), Query Frame = 0


Query: 24  IEEDIDGKSIMGQCRPTDEFTEYKSKNLHAERRRRQKLSDKLLLLRGTVPIITNMNKATI 83
           +EE I G        P    +   SKN+ +ER RRQKL+ +L  LR  VP IT M+KA+I
Sbjct: 32  LEEAISGS--YDSSSPDGAASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASI 91

Query: 84  IDDAITYIQQLQKTVNILKDQLVELEDSSA----------KVVLWPTPN------DNIES 143
           I DAI+YI+ LQ     L+ ++ ELE +            + +L P  +      D+  S
Sbjct: 92  IKDAISYIEGLQYEEKKLEAEIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSS 151

Query: 144 THLIKTYVQADVRVSQIDEHKFWIKMLFEKRKGALAKLIQALYSLGFELIDSSVTTVKGT 199
           T LI+     +++V+ + E    + +   KR   + KL +   SL  +++ S++T+  G 
Sbjct: 152 TSLIEV---LELKVTFMGERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGM 211

[Close]

BLAST of HG10019548 vs. TAIR 10
Match: AT5G57150.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 8.9e-13
Identity = 59/193 (30.57%), Postives = 96/193 (49.74%), Query Frame = 0


Query: 24  IEEDIDGKSIMGQCRPTDEFTEYKSKNLHAERRRRQKLSDKLLLLRGTVPIITNMNKATI 83
           +EE I G        P    +   SKN+ +ER RRQKL+ +L  LR  VP IT M+KA+I
Sbjct: 32  LEEAISGS--YDSSSPDGAASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASI 91

Query: 84  IDDAITYIQQLQKTVNILKDQLVELEDSSA----------KVVLWPTPN------DNIES 143
           I DAI+YI+ LQ     L+ ++ ELE +            + +L P  +      D+  S
Sbjct: 92  IKDAISYIEGLQYEEKKLEAEIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSS 151

Query: 144 THLIKTYVQADVRVSQIDEHKFWIKMLFEKRKGALAKLIQALYSLGFELIDSSVTTVKGT 201
           T LI+     +++V+ + E    + +   KR   + KL +   SL  +++ S++T+  G 
Sbjct: 152 TSLIEV---LELKVTFMGERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGM 211

The following BLAST results are available for this feature:

BLAST of HG10019548 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930020.1	4.1e-60	71.20	transcription factor DYT1 [Cucurbita moschata]	[more]
XP_022146507.1	5.7e-54	67.21	transcription factor DYT1, partial [Momordica charantia]	[more]
XP_042943746.1	6.8e-39	52.51	transcription factor DYT1-like [Carya illinoinensis] >KAG6642638.1 hypothetical ...	[more]
KAG2689688.1	8.9e-39	52.51	hypothetical protein I3760_09G150600 [Carya illinoinensis] >KAG6619421.1 hypothe...	[more]
KAG7964044.1	2.6e-38	51.96	hypothetical protein I3843_09G148800 [Carya illinoinensis]	[more]

BLAST of HG10019548 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81900	3.8e-24	37.89	Transcription factor DYT1 OS=Arabidopsis thaliana OX=3702 GN=DYT1 PE=2 SV=1	[more]
Q9ZVX2	5.1e-13	31.98	Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana OX=3702 GN=AMS ...	[more]
Q2HIV9	2.8e-11	31.02	Transcription factor bHLH35 OS=Arabidopsis thaliana OX=3702 GN=BHLH35 PE=2 SV=1	[more]
Q0V7X4	1.4e-10	32.19	Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR OS=Ar...	[more]
Q6YUS3	1.4e-10	27.88	Transcription factor TDR OS=Oryza sativa subsp. japonica OX=39947 GN=TDR PE=1 SV...	[more]

BLAST of HG10019548 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EVV3	2.0e-60	71.20	transcription factor DYT1 OS=Cucurbita moschata OX=3662 GN=LOC111436461 PE=4 SV=...	[more]
A0A6J1CZR8	2.8e-54	67.21	transcription factor DYT1 OS=Momordica charantia OX=3673 GN=LOC111015710 PE=4 SV...	[more]
A0A7N2LV27	5.3e-37	50.55	BHLH domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A5E4FTK1	1.5e-36	51.09	BHLH domain-containing protein OS=Prunus dulcis OX=3755 GN=ALMOND_2B006144 PE=4 ...	[more]
A0A251PGJ1	1.5e-36	51.09	BHLH domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_4G030600 PE=4 ...	[more]

BLAST of HG10019548 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21330.1	2.7e-25	37.89	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G16910.1	3.6e-14	31.98	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G57150.2	4.0e-13	31.58	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G57150.4	4.0e-13	30.89	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G57150.3	8.9e-13	30.57	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 91..111
None	No IPR available	PANTHER	PTHR31945:SF20	TRANSCRIPTION FACTOR DYT1	coord: 20..217
None	No IPR available	PANTHER	PTHR31945	TRANSCRIPTION FACTOR SCREAM2-RELATED	coord: 20..217
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 51..100 e-value: 6.0E-10 score: 49.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 49..95 e-value: 1.4E-8 score: 34.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 45..94 score: 13.623876
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 40..111 e-value: 5.6E-13 score: 50.6
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 45..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10019548.1	HG10019548.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0043565	sequence-specific DNA binding