HG10019477 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10019477
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like
Location	Chr04: 22243125 .. 22252885 (-)
RNA-Seq Expression	HG10019477
Synteny	HG10019477

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCATTCAATCAAATGTTCAAGAACATGTTGCTTTCCTTCAAGAACATCAAGGCAACCCATATCGAGTCCAAAGTCAAGTGGTCATGCTGCAAGAACATCAAGATAGGAGTACAAATCTTAATGTTTTAGGTTGTTATTTGACTATGCTCCCAATGGAACCAATTTTGACCATTGTTGCCCGTCTTAATGTGAGAGACTCTTTTCTAACACCACTTAAGAAGAAGGATGTTTTACAACCAGTGAAGGCTATTGATTCACTAAGGAAAGTTGTTGAGAAGAACTTTGGTGGATATTGGAAGAACTTTCTTTCTGTACAATCAGTGAAAGCTATTGATTCACTAAGGAAGGAGTTCTTTTCTTTGCTTAAAGATATTGACTTGATCCATGGGTATTTGAACACCAACAACGATTGGAGTCTTGATGAACTTGATGAAAATTTTATGTCTTGGAGTGTTTTTCATAATATTTTTGTTCAAGATGTAGGAGGTTGGTTTGGTCATACTCCGTTGTACAAATTTATTTTATTTCTTTTTTTTAAAACTCGAGGACGAGTTTTCTTTTTGGAGGGGTAGAATGATGTAAGTAGAAAGGGGTTAAATTGGGTAATTGGATAAAAGTGTAAGTTAATTCCCTTTTTACCCCCCACTTGTATTAAAACTCTATAAATAGGAGTCTTTCCCCCATGTATGGACAATTAATGAATAAAGATTTCTCTTCAAAAATTACTCCAAGATCCTAGTCTACATCATGATCTCTACTGATAAATTCATGGAATTATGATTGTGCAGTTGCCAAGCAGAATGCTCAAAATTGAGCCGAGAGTTATCAGTCCCAACCATCCAGCAAAACAACCACCTCAAAATGTTGTGCTCTGGTCTGCTATAGGAGTTATCTGCGGAATGCTTTTTGGAACAAAGACAAAAAATAGTTCGCAGAGTCCAGCTTAAGAGAAATAAATGCTATTCAATCTACGTGACAAGCTTAAGCAATTTTAGGCCGGCTTGTTCCAAACCATTCTGATGAGAATGTTCATTTGCAAAATTCAGTTAGCTCCTATTTACATGATGACCTTCAGGCTATTCACTCTTCTTCAGATTGTGGTCAATCTTCAGAGCCATATTTCAACTCAACAATTCAAGACCCTATTTTGACTTCTCGGTTTATTGAACTTTACCCTTTCTTTTATGCTAGAAAGCTTACTCACTCTGGTTTCTTTGAAAAATCAGAGATTAACATAGATATTTTGGAGGAAGCTTGTACTCGACTCATCACTTCATCGCAAAATCAGAGATCACGAACAAGGTACGATCAGCTTGATATTGATAGTAACCACCTTTAATTAGTTCTTTGGTGAATCTGTCAAACCATGCACGAGGAGATTATTTTAAACCATAAAAAGACTTTCTCAACTTGCATACCAATTACCATTAGACTTGTCTTCCATTTGGGGAGGAATTTGCATACAAACTTTTTCTTCAAGCTCACCATTTAAAAAGACATTTTTCACATCAAGTTGGTGAAGAGGCCAATCCTGATTAACAACTAAGGACAGCAAAAAAACAACAGTATTCAATTTCCCAACCGAAGCAAAGGTTTCTTGGTAATCTATACCATATGATTGGGTAAAGCCTTTGGCAACAAATCTGGCGTTAAATTGTTCCACACTTCCATCAGATTTGCAATTGACTGTGAAAATCCATTTGCAACCAACTGGATTCTTTCCATTTGGCAGCCTTGTAAAAACCCATGTTCCATTGCTTTCAAGAACTCGAATCTCTTCATCCACCGCCTTTTTCCATTTTGGATCTCTAAGTGCATCATGAATGGTTTGTGGGATTTGAATACTATCCAATGAGTCATAAATGCTCGATAAGAAGGATGCAATTTCCCATATTCAACATATTTTTCAATAGGATGATCGGTGCAACTTCTAACAGCTTTTCTCTGAACAATTGGTAGGTACAAATCATCAATTAAAGGTGTCATAAAAGTAACATCCTCTTAAGTGGAATTCAGTAATAAAGAATCGGGTTCAGGTGGTTGGCGTTCTTGGTTGTGTGAGGCAGCCTCTCTTCTTCTCTTAATAAACAATAGGTGTTCAATTTTTCGATGCTTTAGGGGTACAAGACTGGTTAGACTCAAGAGTATTATCTCATTTATGGTAGGAGATGAAACTTCAGTGGTGATGGGATAGTTGGAGTGACAGAGAAAGACTCAACTTCCAATGTCTCAAATTCTCTCATATTCTCTCCCTAAATTTGGGACTTGTTGCAGGTCGTTCGAAAAGGTATTGTCCAACACGTCATCAACAAGATTTTTTTTGGTAAAAGAAACATTTCATTGATAATGAAAGCAGGGGATTACCCCAAACACCAAAAGGTGATTATATCAGAGAATGTTAATTACTGACTGAAAAAGATAAGCTGAAATGACTAAAAGGGTGCTTAGTTTTACACCAAGAAAAAGCAGTAAACAAAACGGTTTCCATAAAGCGATTAAAAGGTGAAGAAGAGTCATTGAAAAGCCGACTGTTCTGTTCACCCCACAATCTCCAGAAAAAAGCTTGAACAAGAGCCAACCAAATCGTCTGCTTCGTACCACCAAAAGGATGACTCACTAGTAAAGAAGCCAATGCATCAGAGATGGAATTAGGGCACATAAAGGACCACCCAAAAGAAGACAAAACAAGATCTCAAAATTTTGCAGCAAATGGACAATGGAAAAATAAATGAATAGGAGATAAAGCATGCTGACAACACATGATGCACCAAGAAGGAGAAATACACATATAAGAAAAACGACGCTGCAAACGATCAGCAGTATTAATGGCACCCCAGCTAAGCTCCCAAAGAAAAATCTTAATCTTCTTGGGATAATTACCTTTCCAAATGAACGAATAAAGATCAAATAAAACATATTCAGTAGCACCCACTAGATCAGTCATAAGAGATTTAACAGTAAAAGTCATAGATAAATCCAGAGGCCAAATCCAAGAATCAGGGTAGGAGCGCAATCTGACAGAAGCCAAGTGATGCAACAAAGTAGCCCATTCTGCAATTTCTAACTTAGTAAGATTACAACAAAGATTTAAGTTCCATGTACCGAAGGATGAGATCCACAAATTAGCCACAGAAGCCTCCGGCTGCTGATAGAAGTGAAAAAGTCTCGGAAACACTGTTGAATGGACACCACAACTAAGCCAAGAGTCATTCCAAAAAGTAGTAGTAGAACCATCCCCAAGCCGTCGACGGACACAATCGGCAATCAAACCAGTGTAGTGACAAATGAACTTCCAAGGGACTTTAGAAGAAGCACGGGAGATAGGAGTAGGCTAAAAACAATCAGAAGAATAATATTTAGCCACAATAAAGGTTCGCTATAAAGCATAATGCTCAGATATAAACCGCCAAGTCCATTTTGCAAGAAGGGAGGAATTTCGATGCTTAAAATTACCAATACCAAGGCTCCCTGAAAGTTGAGGACGTTGAGAGATCCCCCAATTAACATTATGCATACCACCATCACCATGAGCACCTTCCCAAAAGATATCACGAACCAACTTGTCACGGCAATTGATGATAAAGGAGGGGGCTTTGAACAATGATAAATAATACGTAGGGAGATTGGATAGAGTAGCCTGAATGAAAGTGTGTCTACCACCTTTCGAAATGTAAGTATATTTCCAATTATGAAGCTTGCGCTGAATTTTCTCCACCACCGGCTTCCAGAAATTGATAGAGTTAGAATTACCTCCCAAAGGAAGCCCAAGATATGTAGATGGCCAAAAACCCCTTTTACAGCTAAAAGAGTTTACTAACCATTCATAATCAGAGTCAGGTACATGAATCCCAAGGAGTTCGCTCTTAGCAAAATTAATTCTCAGTCCAGAAGCATATTCAAAGGTACGGACAACATCAAACAAGTTTTGAAGTGCAGGACGCTCAGCAACAGAGAATAACAAAGTATCATCAGCAAACTATAAATGATTCAGAGAAAAAGTCGAATTTCCAACCGGATGCGCAACAGTAAAACCCAATGAGGAGCTATGATCAAGAAGGCGACTCAGGCAATCAGCAACTAGAATAAATAAGAAAGGGGAAAGAGGATTACCTTGTCTGATACCCCGTGTTGGAATAATCTTCCCCCGGGAACGACCATTAATAGTAATGGAGTAATTAACACTGGTGACACAACCTCTGATCCAAGTACGCCAAAGATTACCAAAACCCTTAGCCATAAGAATAAAGTCAAGAAATTCCCAATCAACTGTATCAAAAGCCTTCTCTAAATCAAGCTTAAGAACCAACCCTATCTTCTTGGAAAAGGACCAATCATCAATAAGCTCATTAGCCATCAAAGAGGCATCAAGGATCTGCCTATTGGCCACAAAAGCAAGTTGATTGGCTGCGATAGTATAAAGGAGGAGCAGCTTGAGACGATTCAATAATATACGGGCCACAATTTTGTATGCACAAGGAATGAGACTAATAGGACGGTAGTCTGAAATTGATTTTGAATCCACTTTCTTAGGAATCAAACAAATGTAAGTCTCATTCAACTTAACATTACTAACCCCAGAGGTATAAAAATCTTGTATAAGTCGCATCATGTCAGATTTAATAGTGGACCAAAAAAACTTGAAAAATCCAGCAGTGAAACCATCAGGATTGGGAGATTTGCTTGTGCCGAGAGAGGAGACAGCCATATAAACTTCCTCTTCAGTAAATGGACACTCCAAATCAGTAGCTTGAGAGGAGGAGATAGGACTCCAATCAAGGTTGGTAGGAAGGAGGCGTTGATTGCTATCTTTTTAGTCATCGGCAAGATTTGACAATGGTGCAAAGTAGGTCCCAAACTTTTTCCTATTATTTTCCACAATTCTGTTATGCTTCACAACTAAAAAGCAAGCACATAAACTGCCTTCTTGGGTGGGTCAGAATCGCTCGAATAACCAAGTATTCAAGTCATCCCATTATTTAAATCTCCAACGATTATGTGTCCAACTATACCAATCAACAGCAACATGTTCGGAACCTACCATGGATATTGTGATCTTCTCCATGTCTGATAACTAATTGATTTCGAAGTATCATTCACTTCTAAATAACCAGAGCATAGAGTCTCTCTTGGAAAAACAAGCTCATCGTTACTCTGTTCCTCTTGTTGTTGAGAAGATTCTCCATTTGGAGTTCCTTCAGACTCTCCAACCCCTTCGACTTCTTTCCTTTTTTTTAAGATGACTCTTCTATAAAAGTCAAGGTCAGTCGATAGACTCGATACTTACCATTAGATATCTCAAACATTAAGGTCGCCATTTTTCATTGATTCTCTAGGACCTCTACCACCAGGCGGCAAGCGTTCAATACTTTTTCCCATACTCTAAATCACTTCTTTCATTTCCCCCACATCTTTCTCATTCCCTTCTATTCTTTCCTCTAGTTGTTTCTCAACCACTTTTCACGTCCTCACCAGGTTGGAACGTGCTTTAATACTGTTTGTTAAGTTTCTTGGAGCATTTTTTATGCCCTTCCTAAGTTGGAACGTACTCCAATATCAGTTTGTTAGGCTTCCTCGAGCAAAAATCAACCTGCAAAATAACATACGATAGCCTAGAACATTCATTGTTCCACTTCCATTGGAAATAGCTAGCAATTCCTTAAGGGGGCATTTGGGCCAAAGAGTGGAGTTGTGAACTCCATGGAGTTATGAAGTCTTGGGAGTTGTGAACATTTCGGGCCCACAGTGTAAGGAATTAAGAAGGTATAAAATTAATTTTTTTTAAGTAGTGGAACCCACAAACTTCTTGGGCCAAACAAGGAGGGGAGTTCACAACTCTACTCCCCCAACTCCTATTGGGCCAAACACCCCCTATGAGTTCAACACAACCGAGATAACAAGATAACATGAAAGATACTCCAACTATTTGACAGAGTTGGTTCCTCTCTCCCAAAAGCAACTACTCTTACACAAATGTAGAATGTCTTCTAACTCCCCTCACAAAATTATGAACATCTCCCCAACCCATACCATGCATGATCCCCTCTAGTCCCACTACCCAACCCTCTTTGCTAATTTCCCTTTGTGCCTTTCCAATGTGCACAATTGGAGGCCTCACAGATTCACAAGGAGGTTCAAGACAATATGAAGAAGTCCAACTCTTCCTACAAGGATGCTGTTGATAGACAAAGAAAAGATTCACAATGATCTGAGGGAATCTCATTTTCCAGCTGGCACATACAAAAAGTTAGAGAATAAGAAGTCGTGTCCTTTCATGATTTTGCAGAAATATGTGACCAATGCCTACAAGATCGATTTCTCTCCTACTTTGCACATCAACCCTATATTCAATGTTGCAAATCTGCACCAATATCATGCCCCCAATGGTTTTCAGTTTCATCTTAACTTGGGGATGAGTAATTTTGAGACAGGTAGAATTATGATGTGTTTTAGTCTTTCCTTTAATTCGTTATAGTTAGAGTTTCCAGCATTTTTTTCATTTAACAATTCTTTTTAGTTTGATTGTTAGGATTAGTAAGTTTTGTTAGTAAGGCCAGCTTCCAGTTTCCATATATAAATGGGGCTTTCATCTGTATTTTGATCATCTTATTATTCAATAAAATTCACTCCAAACTTGGCCTTCACCAGGAGAAGATATATACCTTTCATCTTTTTGCTTCATCATTTCCTCCGTAGCTCTTGCAATCAATTCAGATATCCATTTATTCACTAGTCAATATATAAGAATAACTTGTCAGCATTTATTAAACAGATACAACATTGACAAACTGTAGAAAGAAAATATTTTTTTTTTAAACGGAAACGAAACTTTTGAACTTTTTTCAGATAAGAAACATTTCATTATCAATGAAATAAGCACCTAAAAGTAATTACAATAGAGATTTCCAATTCGAAACTAAGTAAGAAAGACCAAAGTGATTCGAAGGGTGCCTATTTTTGCACCAATACTAAGTTATAGACAAAACCAAATCCATAAAACTATCAAAATCTGAAAAAGAGTCCTAAAAAGACATTTGTTGGGCTTGCCCTATAAAATCCAAAAGAAAGCTTGAATAGTGACCAACCCAACCATCTTCTTTGAACCATGAAATGGATGACCCACTAAAAGAGAAGCAAGAATGTCAAACATACTATTAGAATAGGTCATTAACCAACTTAGCCACAATGAGCTTCAAACATACTATTAGAATAGGTCATTGACCAACTTAGCCACAATGAGCTTTCTCCACAAAGCATCCTATTCGTGCTAAAAGCGCCAAATTCACTTGGCCAAAAATGGAATTACGGCAACTAAAATTTCCAACACCAAGGCCACCCATCAATTTCGGACGTTGAGAGATCTCCCCATTCACATTATGCATAGCAACATTACCACAGGAGCCCTCCTCTCAGAAAAAATCATAAATCAATTTATCCAACCTCTTAATAGCCTTGGTGGGAGCGCAAAAGGACAAATAATAAGTGGAAACCAGACAAAGTAACCTGAATAAGAGTACCCTTCGAAATATAGGCGTATTTCTAGTTGTGAAGCTTAAACTGCAATCTCTCAACAATCGATTGCCCGAAACAGAGTGAAGAAGGGTTACCTCCCAAAGGAAAACGAAGGTATGATGTTGGCCAAGCACCCTGCTTACAACCGAAAGTAGTCACCATCCAATCCAACTCAAAATCAAAAAAGTTAATCCCCAAAATCTCACTTTTGGAAAAGTTTATAGATAAACTAGAAGCATGCTCATTAAATAAATGAAAAAAGACTAATGCTCGAAGTACAAGGAATCAATGACAAGTACATATGCAAATACAAAAGAAGTTCCGGGACGTCATCCTTCTAAATAAATAGACTAAGTTGGAAAAACAAAAGCATTTCAATTTAAACATGAATCTTGAATGGAAAATTCTGCAAAAATAGACTTATAAAGAGAGCTCCAAAAGAAGCAATAATCCAAGCAATTTGAGAAAAATCCAACCATGCCTATGATTTAACTTGGAAGATTATGAATTCTTTCCAACCAAATTTTAGCAAGGTTTGCTTCGACTGTATTAGACCAAAACAACTGAGATTGCGGCTTTAAAGATGAACTCACCAAGACAACATTCAGCAGATTTTAGTTGGTCCAGCTTTGAAAGAAGGCCCTCGTTTAATTTGGGCCAATGCGGTTATGGTTATACTTGCTGAAATTTGGTTTGAACAAAATCAAAGAGTGTTCCACGACAAAAATCTTAGCTGGTTGGATTGTTTTGAAGTCGCTCGTCGGAATGCTTCCTCTTGGTGTACCTTATCCAAGTCTTTCGAAGAATTCTCTATTCAAGACTTATATTCAAATTGGCATGCTTTTATTTCATAAGTTTAGATTTTACTTTATAACGGACAGCTTGTTCCTTTTGTTTTTGTTTCTGTGGATGATGGAATGATCTCATTTATTTTTATTAGGGATATGAGGGTGCTATGGGGGTGTCAACCTAGTTGAGATTCTCGGGTGCTCCTACTGATCCTTAACTTTCTTTTAGCTCTTTGTATATCAATATTGTATTTTGAGTTTTGACTCACTTCATTATATCAATGAAGTGGTTGGTTTCCTTTTCAAAAATAAAAAAATAAAAAAATAAAAAAAATAAAGATGACTCACCAAAATCAGAATTTGAAATCCTCACAAAACACCCAAAAGGAGTACAACGGACCCCAACAACATCTAGAAAACCTGCAAACGAAGAATAGATGTTGAAGATCTTCTCCTTTCTTGGCGTTCAGATTTCAATAGAAGAAAACTGCGGTGTGAGCATATCATTTTGAGCATCAGAAAGTTGAGATCATCTAACATTTAAAGGAACTGATCAAAATCCCCGACGCTGCAAATATAGGGAGGAAAAAACCCCAAAACTTCAGCTTTAGTGCCCCGAAAAGAATTGATAGAAACCCCTTGATTATTCATTAACTCAATGATCAAAATCTTTCTTTTCATTACTACCAAAAACCGATGAAAAAAGCTAGAATTTTCATCACCCAACTTTAGCCAGGCCTCCTAAATTTCCAAGCTTCTACAAAGGACCAACCAATTTCCTTTGAGCTCCACAAAGATTTTATAAACATTATATCAAACTCCTCCTCCTTAGTTTTCTGAGATAAGACCAAATTCGGATGAAGATTCTGAAGAAACATTTTGAGAGCCAATCACTTTGATTTATCTCCAGGACCTCTAGTGTTCTATAAGACAATCTTCATGCTTAATAGAAACATCTCTTGCACAGAGATTTTACACAAATTCAGATCACAAGCCTCCACAATGGCAACAATAATGGATGGAATCTGAGATGGATGAACAGGAGAAAAATTAACCCTTGGAGTACTATCAATCTTTTTTTCTATTGATTTCTGACATAAACTTGCAATATCTTCACCAAAAAATTCAGCTTGGCTCCCTTTATTATGCAAAACTTAAGCTTGGCTCCCTTTATTATGCAAAAAATTCAGCCTCCATTTGTACAATATGATTTGGGTTATTCTCTCAAGGGTCATATGCTAGGAACTCAAGCTTCAGTTAACTATGGGCCTCATCCAAGTCCTGTTGTAAGCCCTTTCTGCGCAATGGGTTTACACCAGGCATCTAGAGATGCTTCTTATGAGCAGTGGCAGAGTGCTGCAATGATGTATGCCCATTCCTACAACCAGCTCAGGCACTCTGCTTTTCAGGCCCCATTCTGTCAGCAACCCCTCAGCTTTGACTATTCTCAAAACCATTAG

mRNA sequence

ATGGGCATTCAATCAAATGTTCAAGAACATGTTGCTTTCCTTCAAGAACATCAAGGCAACCCATATCGAGTCCAAAGTCAAGTGGTCATGCTGCAAGAACATCAAGATAGGAGTACAAATCTTAATGTTTTAGGTTGTTATTTGACTATGCTCCCAATGGAACCAATTTTGACCATTGTTGCCCGTCTTAATGTGAGAGACTCTTTTCTAACACCACTTAAGAAGAAGGATGTTTTACAACCAGTGAAGGCTATTGATTCACTAAGGAAAGTTGTTGAGAAGAACTTTGGTGGATATTGGAAGAACTTTCTTTCTGTACAATCAGTGAAAGCTATTGATTCACTAAGGAAGGAGTTCTTTTCTTTGCTTAAAGATATTGACTTGATCCATGGGTATTTGAACACCAACAACGATTGGAGTCTTGATGAACTTGATGAAAATTTTATGTCTTGGAGTGTTTTTCATAATATTTTTGTTCAAGATGTAGGAGCTGGCACATACAAAAAGTTAGAGAATAAGAAGTCGTGTCCTTTCATGATTTTGCAGAAATATGTGACCAATGCCTACAAGATCGATTTCTCTCCTACTTTGCACATCAACCCTATATTCAATGTTGCAAATCTGCACCAATATCATGCCCCCAATGGTTTTCAGTTTCATCTTAACTTGGGGATGAGTAATTTTGAGACAGGAACTCAAGCTTCAGTTAACTATGGGCCTCATCCAAGTCCTGTTGTAAGCCCTTTCTGCGCAATGGGTTTACACCAGGCATCTAGAGATGCTTCTTATGAGCAGTGGCAGAGTGCTGCAATGATGTATGCCCATTCCTACAACCAGCTCAGGCACTCTGCTTTTCAGGCCCCATTCTGTCAGCAACCCCTCAGCTTTGACTATTCTCAAAACCATTAG

Coding sequence (CDS)

ATGGGCATTCAATCAAATGTTCAAGAACATGTTGCTTTCCTTCAAGAACATCAAGGCAACCCATATCGAGTCCAAAGTCAAGTGGTCATGCTGCAAGAACATCAAGATAGGAGTACAAATCTTAATGTTTTAGGTTGTTATTTGACTATGCTCCCAATGGAACCAATTTTGACCATTGTTGCCCGTCTTAATGTGAGAGACTCTTTTCTAACACCACTTAAGAAGAAGGATGTTTTACAACCAGTGAAGGCTATTGATTCACTAAGGAAAGTTGTTGAGAAGAACTTTGGTGGATATTGGAAGAACTTTCTTTCTGTACAATCAGTGAAAGCTATTGATTCACTAAGGAAGGAGTTCTTTTCTTTGCTTAAAGATATTGACTTGATCCATGGGTATTTGAACACCAACAACGATTGGAGTCTTGATGAACTTGATGAAAATTTTATGTCTTGGAGTGTTTTTCATAATATTTTTGTTCAAGATGTAGGAGCTGGCACATACAAAAAGTTAGAGAATAAGAAGTCGTGTCCTTTCATGATTTTGCAGAAATATGTGACCAATGCCTACAAGATCGATTTCTCTCCTACTTTGCACATCAACCCTATATTCAATGTTGCAAATCTGCACCAATATCATGCCCCCAATGGTTTTCAGTTTCATCTTAACTTGGGGATGAGTAATTTTGAGACAGGAACTCAAGCTTCAGTTAACTATGGGCCTCATCCAAGTCCTGTTGTAAGCCCTTTCTGCGCAATGGGTTTACACCAGGCATCTAGAGATGCTTCTTATGAGCAGTGGCAGAGTGCTGCAATGATGTATGCCCATTCCTACAACCAGCTCAGGCACTCTGCTTTTCAGGCCCCATTCTGTCAGCAACCCCTCAGCTTTGACTATTCTCAAAACCATTAG

Protein sequence

MGIQSNVQEHVAFLQEHQGNPYRVQSQVVMLQEHQDRSTNLNVLGCYLTMLPMEPILTIVARLNVRDSFLTPLKKKDVLQPVKAIDSLRKVVEKNFGGYWKNFLSVQSVKAIDSLRKEFFSLLKDIDLIHGYLNTNNDWSLDELDENFMSWSVFHNIFVQDVGAGTYKKLENKKSCPFMILQKYVTNAYKIDFSPTLHINPIFNVANLHQYHAPNGFQFHLNLGMSNFETGTQASVNYGPHPSPVVSPFCAMGLHQASRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNH

Homology

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BLAST of HG10019477 vs. NCBI nr
Match: XP_038903441.1 (uncharacterized protein LOC120090027 [Benincasa hispida])

HSP 1 Score: 152.5 bits (384), Expect = 5.7e-33
Identity = 73/89 (82.02%), Postives = 76/89 (85.39%), Query Frame = 0


Query: 214 PNGFQFHLNLGMSNFETGTQASVNYGPHPSPVVSPFCAMGLHQASRDASYEQWQSAAMMY 273
           P   Q+     +     GTQASVNYGPHPSPVVSPFCAMGL+QASRDASYEQWQSAAMMY
Sbjct: 266 PPFVQYDSGYSLMGHMPGTQASVNYGPHPSPVVSPFCAMGLNQASRDASYEQWQSAAMMY 325

Query: 274 AHSYNQLRHSAFQAPFCQQPLSFDYSQNH 303
           AHSYNQLRHSAFQAPFCQQPLSFDYSQNH
Sbjct: 326 AHSYNQLRHSAFQAPFCQQPLSFDYSQNH 354

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BLAST of HG10019477 vs. NCBI nr
Match: XP_004136625.2 (uncharacterized protein LOC101215817 isoform X1 [Cucumis sativus] >KGN59412.1 hypothetical protein Csa_001624 [Cucumis sativus])

HSP 1 Score: 150.6 bits (379), Expect = 2.2e-32
Identity = 72/89 (80.90%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 214 PNGFQFHLNLGMSNFETGTQASVNYGPHPSPVVSPFCAMGLHQASRDASYEQWQSAAMMY 273
           P   Q+     +     GTQASVNYGPHPSPVVSPFCAMGL+QASRDASYEQWQSAAMMY
Sbjct: 266 PPFVQYDSGYSLVGHMPGTQASVNYGPHPSPVVSPFCAMGLNQASRDASYEQWQSAAMMY 325

Query: 274 AHSYNQLRHSAFQAPFCQQPLSFDYSQNH 303
           AHSYNQ RHSAFQAPFCQQPLSFDYSQNH
Sbjct: 326 AHSYNQFRHSAFQAPFCQQPLSFDYSQNH 354

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BLAST of HG10019477 vs. NCBI nr
Match: XP_008443221.1 (PREDICTED: uncharacterized protein LOC103486865 isoform X2 [Cucumis melo])

HSP 1 Score: 146.4 bits (368), Expect = 4.1e-31
Identity = 70/89 (78.65%), Postives = 74/89 (83.15%), Query Frame = 0


Query: 214 PNGFQFHLNLGMSNFETGTQASVNYGPHPSPVVSPFCAMGLHQASRDASYEQWQSAAMMY 273
           P   Q+     +     GTQASVNYGPHPS VVSPFCAMGL+QASRDASYEQWQ+AAMMY
Sbjct: 266 PPFVQYDSGYSLVGHMPGTQASVNYGPHPSSVVSPFCAMGLNQASRDASYEQWQNAAMMY 325

Query: 274 AHSYNQLRHSAFQAPFCQQPLSFDYSQNH 303
           AHSYNQ RHSAFQAPFCQQPLSFDYSQNH
Sbjct: 326 AHSYNQFRHSAFQAPFCQQPLSFDYSQNH 354

[Close]

BLAST of HG10019477 vs. NCBI nr
Match: XP_022152036.1 (uncharacterized protein LOC111019846 [Momordica charantia])

HSP 1 Score: 145.6 bits (366), Expect = 7.0e-31
Identity = 74/111 (66.67%), Postives = 83/111 (74.77%), Query Frame = 0


Query: 193 FSPTLHINPIFNVAN-LHQYHAPNGFQFHLNLGMSNFETGTQASVNYGPHPSPVVSPFCA 252
           ++  L  N   N+A  + Q   P   Q+     +     GTQASV+YGPHPSPVVSPFC 
Sbjct: 247 YNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPFCT 306

Query: 253 MGLHQASRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNH 303
           +GL+Q SRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNH
Sbjct: 307 VGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNH 357

[Close]

BLAST of HG10019477 vs. NCBI nr
Match: XP_023527688.1 (uncharacterized protein LOC111790835 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 141.4 bits (355), Expect = 1.3e-29
Identity = 65/72 (90.28%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 231 GTQASVNYGPHPSPVVSPFCAMGLHQASRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFC 290
           GTQ S+NYGPHPSPVVSPF AMG+++ SRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFC
Sbjct: 283 GTQPSLNYGPHPSPVVSPFSAMGMNRTSRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFC 342

Query: 291 QQPLSFDYSQNH 303
           QQPLSFDYSQNH
Sbjct: 343 QQPLSFDYSQNH 354

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BLAST of HG10019477 vs. ExPASy Swiss-Prot
Match: F4IM84 (DExH-box ATP-dependent RNA helicase DExH5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g01130 PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.9e-16
Identity = 57/130 (43.85%), Postives = 72/130 (55.38%), Query Frame = 0


Query: 36  DRSTNLNVLGCYLTMLPME-----------------PILTIVARLNVRDSFLTPLKKKDV 95
           D + +L  LG YL+ LPME                 PILT+ A L+VRD FLTP  KKD+
Sbjct: 692 DENEDLTTLGRYLSKLPMEPKLGKMLILGAILGCLDPILTVAAGLSVRDPFLTPQDKKDL 751

Query: 96  ---------------LQPVKAIDSLRKVVEKN--FGGYWKNFLSVQSVKAIDSLRKEFFS 132
                          L  V+A +  +K  E++  +   WKNFLS+QS++AIDSLRKEFFS
Sbjct: 752 AEAAKSQFSRDHSDHLALVRAYEGWKKAEEESAVYDYCWKNFLSIQSLRAIDSLRKEFFS 811

[Close]

BLAST of HG10019477 vs. ExPASy Swiss-Prot
Match: F4HYJ7 (DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana OX=3702 GN=At1g48650 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.5e-12
Identity = 50/129 (38.76%), Postives = 68/129 (52.71%), Query Frame = 0


Query: 36  DRSTNLNVLGCYLTMLPME-----------------PILTIVARLNVRDSFLTPLKKKDV 95
           D   NL  LG  L+MLP+E                 P++T+VA L+VRD FL P  KKD+
Sbjct: 772 DDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDL 831

Query: 96  LQPVKAIDSLR---------------KVVEKNFGGY---WKNFLSVQSVKAIDSLRKEFF 130
            +  ++  S R               K  E+   GY   WKNFLS Q++KA+DS+RK+FF
Sbjct: 832 AETARSKFSGRDYSDHLTLVRAYNGWKDAERTHSGYDYCWKNFLSSQTLKAMDSMRKQFF 891

[Close]

BLAST of HG10019477 vs. ExPASy TrEMBL
Match: A0A0A0LFE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G817720 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.1e-32
Identity = 72/89 (80.90%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 214 PNGFQFHLNLGMSNFETGTQASVNYGPHPSPVVSPFCAMGLHQASRDASYEQWQSAAMMY 273
           P   Q+     +     GTQASVNYGPHPSPVVSPFCAMGL+QASRDASYEQWQSAAMMY
Sbjct: 266 PPFVQYDSGYSLVGHMPGTQASVNYGPHPSPVVSPFCAMGLNQASRDASYEQWQSAAMMY 325

Query: 274 AHSYNQLRHSAFQAPFCQQPLSFDYSQNH 303
           AHSYNQ RHSAFQAPFCQQPLSFDYSQNH
Sbjct: 326 AHSYNQFRHSAFQAPFCQQPLSFDYSQNH 354

[Close]

BLAST of HG10019477 vs. ExPASy TrEMBL
Match: A0A1S3B8A9 (uncharacterized protein LOC103486865 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486865 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.0e-31
Identity = 70/89 (78.65%), Postives = 74/89 (83.15%), Query Frame = 0


Query: 214 PNGFQFHLNLGMSNFETGTQASVNYGPHPSPVVSPFCAMGLHQASRDASYEQWQSAAMMY 273
           P   Q+     +     GTQASVNYGPHPS VVSPFCAMGL+QASRDASYEQWQ+AAMMY
Sbjct: 266 PPFVQYDSGYSLVGHMPGTQASVNYGPHPSSVVSPFCAMGLNQASRDASYEQWQNAAMMY 325

Query: 274 AHSYNQLRHSAFQAPFCQQPLSFDYSQNH 303
           AHSYNQ RHSAFQAPFCQQPLSFDYSQNH
Sbjct: 326 AHSYNQFRHSAFQAPFCQQPLSFDYSQNH 354

[Close]

BLAST of HG10019477 vs. ExPASy TrEMBL
Match: A0A6J1DGF4 (uncharacterized protein LOC111019846 OS=Momordica charantia OX=3673 GN=LOC111019846 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 3.4e-31
Identity = 74/111 (66.67%), Postives = 83/111 (74.77%), Query Frame = 0


Query: 193 FSPTLHINPIFNVAN-LHQYHAPNGFQFHLNLGMSNFETGTQASVNYGPHPSPVVSPFCA 252
           ++  L  N   N+A  + Q   P   Q+     +     GTQASV+YGPHPSPVVSPFC 
Sbjct: 247 YNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPFCT 306

Query: 253 MGLHQASRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNH 303
           +GL+Q SRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNH
Sbjct: 307 VGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQNH 357

[Close]

BLAST of HG10019477 vs. ExPASy TrEMBL
Match: A0A6J1J0D7 (uncharacterized protein LOC111482320 OS=Cucurbita maxima OX=3661 GN=LOC111482320 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 6.4e-30
Identity = 65/72 (90.28%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 231 GTQASVNYGPHPSPVVSPFCAMGLHQASRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFC 290
           GTQ S+NYGPHPSPVVSPF AMG+++ SRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFC
Sbjct: 283 GTQPSLNYGPHPSPVVSPFSAMGMNRTSRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFC 342

Query: 291 QQPLSFDYSQNH 303
           QQPLSFDYSQNH
Sbjct: 343 QQPLSFDYSQNH 354

[Close]

BLAST of HG10019477 vs. ExPASy TrEMBL
Match: A0A6J1I664 (uncharacterized protein LOC111469995 OS=Cucurbita maxima OX=3661 GN=LOC111469995 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.4e-29
Identity = 67/89 (75.28%), Postives = 72/89 (80.90%), Query Frame = 0


Query: 214 PNGFQFHLNLGMSNFETGTQASVNYGPHPSPVVSPFCAMGLHQASRDASYEQWQSAAMMY 273
           P   Q+     +     GTQASV+YGPHPSP VSPFC +GL+Q SRDASYEQWQSAAMMY
Sbjct: 266 PPFVQYDSGYSLMGHIPGTQASVSYGPHPSPAVSPFCTVGLNQTSRDASYEQWQSAAMMY 325

Query: 274 AHSYNQLRHSAFQAPFCQQPLSFDYSQNH 303
           AHSYNQLRHSAFQAPF QQPLSFDYSQNH
Sbjct: 326 AHSYNQLRHSAFQAPFIQQPLSFDYSQNH 354

[Close]

BLAST of HG10019477 vs. TAIR 10
Match: AT2G01130.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 87.0 bits (214), Expect = 2.7e-17
Identity = 57/130 (43.85%), Postives = 72/130 (55.38%), Query Frame = 0


Query: 36  DRSTNLNVLGCYLTMLPME-----------------PILTIVARLNVRDSFLTPLKKKDV 95
           D + +L  LG YL+ LPME                 PILT+ A L+VRD FLTP  KKD+
Sbjct: 692 DENEDLTTLGRYLSKLPMEPKLGKMLILGAILGCLDPILTVAAGLSVRDPFLTPQDKKDL 751

Query: 96  ---------------LQPVKAIDSLRKVVEKN--FGGYWKNFLSVQSVKAIDSLRKEFFS 132
                          L  V+A +  +K  E++  +   WKNFLS+QS++AIDSLRKEFFS
Sbjct: 752 AEAAKSQFSRDHSDHLALVRAYEGWKKAEEESAVYDYCWKNFLSIQSLRAIDSLRKEFFS 811

[Close]

BLAST of HG10019477 vs. TAIR 10
Match: AT1G48650.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 75.1 bits (183), Expect = 1.1e-13
Identity = 50/129 (38.76%), Postives = 68/129 (52.71%), Query Frame = 0


Query: 36  DRSTNLNVLGCYLTMLPME-----------------PILTIVARLNVRDSFLTPLKKKDV 95
           D   NL  LG  L+MLP+E                 P++T+VA L+VRD FL P  KKD+
Sbjct: 772 DDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDL 831

Query: 96  LQPVKAIDSLR---------------KVVEKNFGGY---WKNFLSVQSVKAIDSLRKEFF 130
            +  ++  S R               K  E+   GY   WKNFLS Q++KA+DS+RK+FF
Sbjct: 832 AETARSKFSGRDYSDHLTLVRAYNGWKDAERTHSGYDYCWKNFLSSQTLKAMDSMRKQFF 891

[Close]

BLAST of HG10019477 vs. TAIR 10
Match: AT1G48650.2 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 75.1 bits (183), Expect = 1.1e-13
Identity = 50/129 (38.76%), Postives = 68/129 (52.71%), Query Frame = 0


Query: 36  DRSTNLNVLGCYLTMLPME-----------------PILTIVARLNVRDSFLTPLKKKDV 95
           D   NL  LG  L+MLP+E                 P++T+VA L+VRD FL P  KKD+
Sbjct: 772 DDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDL 831

Query: 96  LQPVKAIDSLR---------------KVVEKNFGGY---WKNFLSVQSVKAIDSLRKEFF 130
            +  ++  S R               K  E+   GY   WKNFLS Q++KA+DS+RK+FF
Sbjct: 832 AETARSKFSGRDYSDHLTLVRAYNGWKDAERTHSGYDYCWKNFLSSQTLKAMDSMRKQFF 891

[Close]

BLAST of HG10019477 vs. TAIR 10
Match: AT3G56680.1 (Single-stranded nucleic acid binding R3H protein )

HSP 1 Score: 73.9 bits (180), Expect = 2.4e-13
Identity = 41/106 (38.68%), Postives = 57/106 (53.77%), Query Frame = 0


Query: 196 TLHINPIFNVANLHQYHAPNGFQFHLNLGMSNFETGTQASVNYGPHPSPVVSPFCAMGLH 255
           +L +N  FN+   +    P  + + +     N      A + +GPHPS ++SP+      
Sbjct: 254 SLPVNQNFNLPPFNIQQIPTPY-YEMGFTGYNQIPSPPAPLGFGPHPSSIMSPY------ 313

Query: 256 QASRDASYEQWQSAAMMYAHSYNQLRHSAFQAPFCQQPLSFDYSQN 302
             + DA Y  W +AAMMYAH Y Q R+ + QA F QQPLSFDY QN
Sbjct: 314 GTTMDAMYMHWPNAAMMYAHPYEQFRNGSLQAQFVQQPLSFDYMQN 352

[Close]

BLAST of HG10019477 vs. TAIR 10
Match: AT2G40960.1 (Single-stranded nucleic acid binding R3H protein )

HSP 1 Score: 70.1 bits (170), Expect = 3.5e-12
Identity = 40/82 (48.78%), Postives = 51/82 (62.20%), Query Frame = 0


Query: 222 NLGMSNFETGTQASVNYGPHPSPVVSPFCAMGLHQASRDAS-YEQW-QSAAMMYAHSYNQ 281
           ++G   +      S+N G H   V+SP    GL+Q SRDA+ Y QW  +AA+MY HSY+ 
Sbjct: 271 DMGFRGYSPTAPPSLNLGQH--SVMSPCVTTGLNQPSRDAAMYMQWPNAAAVMYTHSYDH 330

Query: 282 LRHSAFQAPFCQQPLSFDYSQN 302
            R+S FQA F  QPLSFDY QN
Sbjct: 331 FRNSPFQAQFYPQPLSFDYMQN 350

The following BLAST results are available for this feature:

BLAST of HG10019477 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903441.1	5.7e-33	82.02	uncharacterized protein LOC120090027 [Benincasa hispida]	[more]
XP_004136625.2	2.2e-32	80.90	uncharacterized protein LOC101215817 isoform X1 [Cucumis sativus] >KGN59412.1 hy...	[more]
XP_008443221.1	4.1e-31	78.65	PREDICTED: uncharacterized protein LOC103486865 isoform X2 [Cucumis melo]	[more]
XP_022152036.1	7.0e-31	66.67	uncharacterized protein LOC111019846 [Momordica charantia]	[more]
XP_023527688.1	1.3e-29	90.28	uncharacterized protein LOC111790835 [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10019477 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IM84	3.9e-16	43.85	DExH-box ATP-dependent RNA helicase DExH5, mitochondrial OS=Arabidopsis thaliana...	[more]
F4HYJ7	1.5e-12	38.76	DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of HG10019477 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFE9	1.1e-32	80.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G817720 PE=4 SV=1	[more]
A0A1S3B8A9	2.0e-31	78.65	uncharacterized protein LOC103486865 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1DGF4	3.4e-31	66.67	uncharacterized protein LOC111019846 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1J0D7	6.4e-30	90.28	uncharacterized protein LOC111482320 OS=Cucurbita maxima OX=3661 GN=LOC111482320...	[more]
A0A6J1I664	1.4e-29	75.28	uncharacterized protein LOC111469995 OS=Cucurbita maxima OX=3661 GN=LOC111469995...	[more]

BLAST of HG10019477 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01130.1	2.7e-17	43.85	DEA(D/H)-box RNA helicase family protein	[more]
AT1G48650.1	1.1e-13	38.76	DEA(D/H)-box RNA helicase family protein	[more]
AT1G48650.2	1.1e-13	38.76	DEA(D/H)-box RNA helicase family protein	[more]
AT3G56680.1	2.4e-13	38.68	Single-stranded nucleic acid binding R3H protein	[more]
AT2G40960.1	3.5e-12	48.78	Single-stranded nucleic acid binding R3H protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15672	CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN	coord: 213..302
None	No IPR available	PANTHER	PTHR15672:SF15	OS05G0411600 PROTEIN	coord: 213..302

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10019477.1	HG10019477.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding