HG10019441 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10019441
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	60S ribosomal protein L6
Location	Chr04: 21905358 .. 21907795 (-)
RNA-Seq Expression	HG10019441
Synteny	HG10019441

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCGAAGACAGCTAGAGTTAGCCGAAACCCCGATCTCATTCGAGGGGTTGGCAAATACTCGAGGTCCAAGATGTACCACAAGCGAGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGTGTCTTTCCTCGCCACGATGCCAAGCCTAAGGCCGACGCACCAGCAGAGAAGCCGCCGAAATTTTACCCTGCTGACGATGTCAAGAAACCACTTGTCAACAAGCGCAAGGCTAAGCCCACCAAACTTAGGTAGATCTCTCTTAATGTTCTTTCTTTGCCTGTTATTAAACGAGGAAAATTTGAGTTATGCCGTGGCTATGAAAAAAAGGGGGAGTTTTTACGCCTGGGTGACTGCCATAAAAGATATATTTATTTTACACTTGATTTGAGTTTTCGGTTTTGAATTACGTGAAGTGAGTAACGTTGGCATGTTGCTCATTTTCCAAATAATAAACATTGGGTTCAGTTCAGTTAATTATTAGTTTGGGGGGTGTTCATATAACTTAGTTTAACAAATTTATTCTATTTGCAGGTCTAGCATTACTCCTGGAACCGTGCTTATCATTCTTACTGGAAGGTTCAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCATCTGGGTTGCTTTTAGTGACCGGTGAGTTTCGACGATTTTCTCTAAATGCATCTCTTTATAATTTTTGATGTACTATCACATCGTGTTGGGGGTTGAGAGGTTTTATTATCTGTTCATGGGGATTGTTTTGTTTTCTTTATATTCATTGTGTACTTTGTGTTAGATTTGCATGGGAAGTCTCGTTTATGATATCTTAGCATCTTAAATTGTTTGGTTTAGGTTTACATATTATCTTAAATGCGTGTCCTGCATATTGTTTACCATTGAGAAATAAGTAGGATTCTTTGGGTTTTACATTTTGGTAGTATTAATAGTTTAGCCTCACAAAGGTATTATTTTGTATAGTTGGAATCCCTCATTTTTTTTATAGAGGATGCTTCTTCCTTTTGTGGGCTGATTTTTCTGCATGCCCTTGTGTTCTTTCATTTCTTCTCAATAAAAGTGGTTAATCTCATGAAAAAAATGTTTTAGCCTCACAACCAATTGATATTGAAATGTCTCATGCCTTGCATTCTGCCCATATGCCTTGCCAATGGTCTTTACATACCACTGAAATGTTCGTGCCTCCTATTCAGACTATATGCTCTGCCATTGGTCTTTACATGTCTTAAGTTTGAGGTTAAACTATTAATACTACCAAAATGTCCAAAGAAAGCGAGATTCTTTATCTGGCAAGTTCTACATGAGCAAGTGAACACTTTGGATTGGCTTTCGAGGAGAATGCCTTCATTAGCGGGTCCTTTTTGTTGTATTTTCTCGGAAGGCAGAGGATGACCTGAATCACATCCTTTGGAGATTTGAGTTCTCGCACTCTGTTTGGAATTTGTTCTTCCAGATGTTTGGTTTTGTGCTTGCCCCTCAGAGGTACATTAGTGTTATGATTGGGGAGTTCCTACTTCATTTGGCCTTTCGTGAGAAAGGTCGCTTCTTGTGATTGGTGAGGGTGTGTACTCTCATATGGAATCTTTGTGGGAAAGGAACAACCGAGTGTTTAGTGGGTTGGTTAAGGATCCTAGTGATGTTTGGGTCCTTATTAGGTTTCATGTTTCTCTTTGTAATTATTCTATAGTCACTATTTTGATTGATTGGGCCCTGTTTCTTTAATGGGGTTCTTCTTTTGGGTGCTTGATTTTTTTTGTATGACCTTGTATTTTTTCATTTTTTCTCGCAATGAAAGTGGTTGCTTTATCAAAAACATGTCTCAAATTTCTAAGCTTCATGTGCAATATCAGGGAGGGGTTTGGCTTGGTGATGCAGATTGTAGAATATGTTTGGGAGAAGGGATGCATATGAAGTAGTGATTAGATGTGGTCTTTGATTTTAAATCCGCAATTCTTGAACCTGCTAGGGATTATCTGAATTTAAAGTTTATCATTTTAGGTCCATTCAAGGTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCTACCAAGGTGGACATTGCCGGAGTCAATGTGGAGAAGTTTGACGACAAATATTTCTCCAAGGAAGTTCAGAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTTGAGGCAGAGAAGGAGGTTCGTAGTTGTTTTCTTTTATCTTTTTTTTTTCCCCTTCAAATACTTAAAGTTTTATCATTTCTTTGTCCTAATTTCTGGTCACCATTGTTACATGTAGGAAAAAAGTGCACTTCCACAAGACAAAAAAGATGATCAGAAGGCCGTGGACTTGGCGCTTCTAAAGTCCATTGAGGCAGTTTCAGACTTAAGAACCTACTTAGCTGCAAGGTTTTCTCTAAAGGCAGGCATGAAACCGCACGAGCTTGTTTTCTAG

mRNA sequence

ATGGCTCCGAAGACAGCTAGAGTTAGCCGAAACCCCGATCTCATTCGAGGGGTTGGCAAATACTCGAGGTCCAAGATGTACCACAAGCGAGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGTGTCTTTCCTCGCCACGATGCCAAGCCTAAGGCCGACGCACCAGCAGAGAAGCCGCCGAAATTTTACCCTGCTGACGATGTCAAGAAACCACTTGTCAACAAGCGCAAGGCTAAGCCCACCAAACTTAGGTCTAGCATTACTCCTGGAACCGTGCTTATCATTCTTACTGGAAGGTTCAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCATCTGGGTTGCTTTTAGTGACCGGTCCATTCAAGGTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCTACCAAGGTGGACATTGCCGGAGTCAATGTGGAGAAGTTTGACGACAAATATTTCTCCAAGGAAGTTCAGAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTTGAGGCAGAGAAGGAGGAAAAAAGTGCACTTCCACAAGACAAAAAAGATGATCAGAAGGCCGTGGACTTGGCGCTTCTAAAGTCCATTGAGGCAGTTTCAGACTTAAGAACCTACTTAGCTGCAAGGTTTTCTCTAAAGGCAGGCATGAAACCGCACGAGCTTGTTTTCTAG

Coding sequence (CDS)

ATGGCTCCGAAGACAGCTAGAGTTAGCCGAAACCCCGATCTCATTCGAGGGGTTGGCAAATACTCGAGGTCCAAGATGTACCACAAGCGAGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGTGTCTTTCCTCGCCACGATGCCAAGCCTAAGGCCGACGCACCAGCAGAGAAGCCGCCGAAATTTTACCCTGCTGACGATGTCAAGAAACCACTTGTCAACAAGCGCAAGGCTAAGCCCACCAAACTTAGGTCTAGCATTACTCCTGGAACCGTGCTTATCATTCTTACTGGAAGGTTCAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCATCTGGGTTGCTTTTAGTGACCGGTCCATTCAAGGTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCTACCAAGGTGGACATTGCCGGAGTCAATGTGGAGAAGTTTGACGACAAATATTTCTCCAAGGAAGTTCAGAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTTGAGGCAGAGAAGGAGGAAAAAAGTGCACTTCCACAAGACAAAAAAGATGATCAGAAGGCCGTGGACTTGGCGCTTCTAAAGTCCATTGAGGCAGTTTCAGACTTAAGAACCTACTTAGCTGCAAGGTTTTCTCTAAAGGCAGGCATGAAACCGCACGAGCTTGTTTTCTAG

Protein sequence

MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLALLKSIEAVSDLRTYLAARFSLKAGMKPHELVF

Homology

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BLAST of HG10019441 vs. NCBI nr
Match: XP_022935449.1 (60S ribosomal protein L6-1-like [Cucurbita moschata] >KAG6581596.1 60S ribosomal protein L6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 436.4 bits (1121), Expect = 1.5e-118
Identity = 225/231 (97.40%), Postives = 229/231 (99.13%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK DAPAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDLAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDLALLKSIEAVSDLRTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQKAVD ALLKSIEAVSDL+TYLAARFSLK+GMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKSGMKPHELVF 231

[Close]

BLAST of HG10019441 vs. NCBI nr
Match: XP_004149609.1 (60S ribosomal protein L6-2 [Cucumis sativus] >KGN58615.1 hypothetical protein Csa_001784 [Cucumis sativus])

HSP 1 Score: 435.6 bits (1119), Expect = 2.6e-118
Identity = 225/231 (97.40%), Postives = 229/231 (99.13%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA+APAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKP+VNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GV+VEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDLALLKSIEAVSDLRTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQKAVD ALLKSIEAVSDL+TYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of HG10019441 vs. NCBI nr
Match: XP_038880885.1 (60S ribosomal protein L6-1-like [Benincasa hispida])

HSP 1 Score: 435.3 bits (1118), Expect = 3.4e-118
Identity = 226/231 (97.84%), Postives = 228/231 (98.70%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRK KPTKLRSSITPGTVLIILTGRFKGKRVVFLKQL SGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLQSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDLALLKSIEAVSDLRTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQKAVD ALLKSIEAV+DL+TYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVADLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of HG10019441 vs. NCBI nr
Match: XP_008461779.1 (PREDICTED: 60S ribosomal protein L6-1-like [Cucumis melo] >KAA0048314.1 60S ribosomal protein L6-1-like [Cucumis melo var. makuwa] >TYK10659.1 60S ribosomal protein L6-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 433.7 bits (1114), Expect = 9.8e-118
Identity = 224/231 (96.97%), Postives = 227/231 (98.27%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPK +APAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKPEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLR+SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRASITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDLALLKSIEAVSDLRTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQK VD ALLKSIEAVSDL+TYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKTVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of HG10019441 vs. NCBI nr
Match: XP_023528566.1 (60S ribosomal protein L6-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 433.0 bits (1112), Expect = 1.7e-117
Identity = 223/231 (96.54%), Postives = 227/231 (98.27%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPK AR SRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK DAPAEKPP
Sbjct: 1   MAPKAARASRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDLAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDLALLKSIEAVSDLRTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQKAVD ALLKSIEAVSDL+TYLAARFSLK+GMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKSGMKPHELVF 231

[Close]

BLAST of HG10019441 vs. ExPASy Swiss-Prot
Match: Q9C9C6 (60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 9.3e-103
Identity = 189/228 (82.89%), Postives = 207/228 (90.79%), Query Frame = 0


Query: 4   KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFY 63
           +TA+V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AKP KLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQDKKDDQKAVDLALLKSIEAVSDLRTYLAARFSLKAGMKPHELVF 232
            +PQ KKDDQKAVD AL+K+IEAV +L+TYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of HG10019441 vs. ExPASy Swiss-Prot
Match: Q9FZ76 (60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 1.6e-102
Identity = 187/230 (81.30%), Postives = 207/230 (90.00%), Query Frame = 0


Query: 2   APKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPK 61
           A +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK DAP EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGP 121
           FYPA+DVKKPLVN+RK KPTKL++SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 122 FKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEE 181
           FK+NGVPLRRVNQ+YVI TSTK+DI+GVN EKFDDKYF K  +KKKKK EGEFFEAEKEE
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEE 183

Query: 182 KSALPQDKKDDQKAVDLALLKSIEAVSDLRTYLAARFSLKAGMKPHELVF 232
           K  +PQ+KK+DQK VD AL+KSIEAV +L+ YL ARFSL  GMKPHELVF
Sbjct: 184 KKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

[Close]

BLAST of HG10019441 vs. ExPASy Swiss-Prot
Match: Q9C9C5 (60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 1.6e-102
Identity = 189/228 (82.89%), Postives = 207/228 (90.79%), Query Frame = 0


Query: 4   KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFY 63
           +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AKPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQDKKDDQKAVDLALLKSIEAVSDLRTYLAARFSLKAGMKPHELVF 232
            +PQ KKDDQKAVD AL+K+IEAV +L+TYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of HG10019441 vs. ExPASy Swiss-Prot
Match: P34091 (60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 1.1e-100
Identity = 186/224 (83.04%), Postives = 203/224 (90.62%), Query Frame = 0


Query: 8   VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADD 67
           VSRNP+L+RG+GKYSRSKMYHKRGLWAIKAKNGGVFP+H  K       EKPPKFYPADD
Sbjct: 11  VSRNPELVRGIGKYSRSKMYHKRGLWAIKAKNGGVFPKHAPKSADSKAVEKPPKFYPADD 70

Query: 68  VKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGV 127
           VKKPL+NKRK KPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFKVNGV
Sbjct: 71  VKKPLINKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKVNGV 130

Query: 128 PLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQ 187
           PLRRVNQ+YVIATSTKVDI+GVNVEKFDDKYF K+ +KK KKGEGEFFEAEK+E + LPQ
Sbjct: 131 PLRRVNQAYVIATSTKVDISGVNVEKFDDKYFGKKAEKKNKKGEGEFFEAEKKEVNVLPQ 190

Query: 188 DKKDDQKAVDLALLKSIEAVSDLRTYLAARFSLKAGMKPHELVF 232
           +KKDDQKAVD+ALLK+IE V +L+ YL ARFSLKAGMKPHELVF
Sbjct: 191 EKKDDQKAVDVALLKAIEGVPELKAYLGARFSLKAGMKPHELVF 234

[Close]

BLAST of HG10019441 vs. ExPASy Swiss-Prot
Match: P47911 (60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3)

HSP 1 Score: 192.6 bits (488), Expect = 5.0e-48
Identity = 125/257 (48.64%), Postives = 161/257 (62.65%), Query Frame = 0


Query: 3   PKTAR--VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAD------- 62
           PK A+   SRNP L+RG+G+YSRS MY ++ L+  K K      + + K K +       
Sbjct: 44  PKKAKPHCSRNPVLVRGIGRYSRSAMYSRKALY--KRKYSAAKTKVEKKKKKEKVLATVT 103

Query: 63  -------------APAEKPPKFYPADDVKKPLVNKRKAKP-----TKLRSSITPGTVLII 122
                            K P++YP +DV + L++  K KP      +LRSSITPGTVLII
Sbjct: 104 KTVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSQHVRRLRSSITPGTVLII 163

Query: 123 LTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEK-F 182
           LTGR +GKRVVFLKQL SGLLLVTGP  +N VPLRR +Q +VIATSTKVDI+ V + K  
Sbjct: 164 LTGRHRGKRVVFLKQLDSGLLLVTGPLVINRVPLRRTHQKFVIATSTKVDISDVKIPKHL 223

Query: 183 DDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLALLKSIEAVSDLRTYL 232
            D YF K+  +K +  EGE F+ EK EK  + + +K DQKAVDL +L  I+AV  L+ YL
Sbjct: 224 TDAYFKKKQLRKPRHQEGEIFDTEK-EKYEITEQRKADQKAVDLQILPKIKAVPQLQGYL 283

[Close]

BLAST of HG10019441 vs. ExPASy TrEMBL
Match: A0A6J1F5G0 (60S ribosomal protein L6 OS=Cucurbita moschata OX=3662 GN=LOC111442321 PE=3 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 7.3e-119
Identity = 225/231 (97.40%), Postives = 229/231 (99.13%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK DAPAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDLAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDLALLKSIEAVSDLRTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQKAVD ALLKSIEAVSDL+TYLAARFSLK+GMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKSGMKPHELVF 231

[Close]

BLAST of HG10019441 vs. ExPASy TrEMBL
Match: A0A0A0L9J7 (60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_3G698560 PE=3 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 1.3e-118
Identity = 225/231 (97.40%), Postives = 229/231 (99.13%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA+APAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKP+VNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GV+VEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDLALLKSIEAVSDLRTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQKAVD ALLKSIEAVSDL+TYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of HG10019441 vs. ExPASy TrEMBL
Match: A0A5D3CKB9 (60S ribosomal protein L6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00210 PE=3 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 4.8e-118
Identity = 224/231 (96.97%), Postives = 227/231 (98.27%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPK +APAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKPEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLR+SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRASITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDLALLKSIEAVSDLRTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQK VD ALLKSIEAVSDL+TYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKTVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of HG10019441 vs. ExPASy TrEMBL
Match: A0A1S3CFY6 (60S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103500301 PE=3 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 4.8e-118
Identity = 224/231 (96.97%), Postives = 227/231 (98.27%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPK +APAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKPEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLR+SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRASITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDLALLKSIEAVSDLRTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQK VD ALLKSIEAVSDL+TYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKTVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of HG10019441 vs. ExPASy TrEMBL
Match: A0A6J1J7G9 (60S ribosomal protein L6 OS=Cucurbita maxima OX=3661 GN=LOC111482059 PE=3 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 8.1e-118
Identity = 224/231 (96.97%), Postives = 228/231 (98.70%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK DAPAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDLAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDLALLKSIEAVSDLRTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQKAVD ALLKSIEAVS L+TYLAARFSLK+GMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSYLKTYLAARFSLKSGMKPHELVF 231

[Close]

BLAST of HG10019441 vs. TAIR 10
Match: AT1G74060.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 374.4 bits (960), Expect = 6.6e-104
Identity = 189/228 (82.89%), Postives = 207/228 (90.79%), Query Frame = 0


Query: 4   KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFY 63
           +TA+V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AKP KLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQDKKDDQKAVDLALLKSIEAVSDLRTYLAARFSLKAGMKPHELVF 232
            +PQ KKDDQKAVD AL+K+IEAV +L+TYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of HG10019441 vs. TAIR 10
Match: AT1G18540.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 373.6 bits (958), Expect = 1.1e-103
Identity = 187/230 (81.30%), Postives = 207/230 (90.00%), Query Frame = 0


Query: 2   APKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPK 61
           A +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK DAP EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGP 121
           FYPA+DVKKPLVN+RK KPTKL++SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 122 FKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEE 181
           FK+NGVPLRRVNQ+YVI TSTK+DI+GVN EKFDDKYF K  +KKKKK EGEFFEAEKEE
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEE 183

Query: 182 KSALPQDKKDDQKAVDLALLKSIEAVSDLRTYLAARFSLKAGMKPHELVF 232
           K  +PQ+KK+DQK VD AL+KSIEAV +L+ YL ARFSL  GMKPHELVF
Sbjct: 184 KKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

[Close]

BLAST of HG10019441 vs. TAIR 10
Match: AT1G74050.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 373.6 bits (958), Expect = 1.1e-103
Identity = 189/228 (82.89%), Postives = 207/228 (90.79%), Query Frame = 0


Query: 4   KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFY 63
           +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AKPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQDKKDDQKAVDLALLKSIEAVSDLRTYLAARFSLKAGMKPHELVF 232
            +PQ KKDDQKAVD AL+K+IEAV +L+TYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

The following BLAST results are available for this feature:

BLAST of HG10019441 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935449.1	1.5e-118	97.40	60S ribosomal protein L6-1-like [Cucurbita moschata] >KAG6581596.1 60S ribosomal...	[more]
XP_004149609.1	2.6e-118	97.40	60S ribosomal protein L6-2 [Cucumis sativus] >KGN58615.1 hypothetical protein Cs...	[more]
XP_038880885.1	3.4e-118	97.84	60S ribosomal protein L6-1-like [Benincasa hispida]	[more]
XP_008461779.1	9.8e-118	96.97	PREDICTED: 60S ribosomal protein L6-1-like [Cucumis melo] >KAA0048314.1 60S ribo...	[more]
XP_023528566.1	1.7e-117	96.54	60S ribosomal protein L6-1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10019441 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9C6	9.3e-103	82.89	60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1	[more]
Q9FZ76	1.6e-102	81.30	60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1	[more]
Q9C9C5	1.6e-102	82.89	60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1	[more]
P34091	1.1e-100	83.04	60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 S...	[more]
P47911	5.0e-48	48.64	60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3	[more]

BLAST of HG10019441 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F5G0	7.3e-119	97.40	60S ribosomal protein L6 OS=Cucurbita moschata OX=3662 GN=LOC111442321 PE=3 SV=1	[more]
A0A0A0L9J7	1.3e-118	97.40	60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_3G698560 PE=3 SV=1	[more]
A0A5D3CKB9	4.8e-118	96.97	60S ribosomal protein L6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CFY6	4.8e-118	96.97	60S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103500301 PE=3 SV=1	[more]
A0A6J1J7G9	8.1e-118	96.97	60S ribosomal protein L6 OS=Cucurbita maxima OX=3661 GN=LOC111482059 PE=3 SV=1	[more]

BLAST of HG10019441 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74060.1	6.6e-104	82.89	Ribosomal protein L6 family protein	[more]
AT1G18540.1	1.1e-103	81.30	Ribosomal protein L6 family protein	[more]
AT1G74050.1	1.1e-103	82.89	Ribosomal protein L6 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 85..169 e-value: 4.3E-17 score: 63.9
IPR005568	Ribosomal protein L6, N-terminal	PFAM	PF03868	Ribosomal_L6e_N	coord: 4..59 e-value: 2.4E-16 score: 59.8
IPR000915	60S ribosomal protein L6E	PFAM	PF01159	Ribosomal_L6e	coord: 124..231 e-value: 7.0E-39 score: 132.9
IPR000915	60S ribosomal protein L6E	PANTHER	PTHR10715	60S RIBOSOMAL PROTEIN L6	coord: 1..231
IPR000915	60S ribosomal protein L6E	PROSITE	PS01170	RIBOSOMAL_L6E	coord: 125..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..74
None	No IPR available	PANTHER	PTHR10715:SF9	60S RIBOSOMAL PROTEIN L6	coord: 1..231
IPR041997	Ribosomal Protein L6, KOW domain	CDD	cd13156	KOW_RPL6	coord: 79..231 e-value: 1.50357E-78 score: 230.898
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 84..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10019441.1	HG10019441.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome