HG10019432 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10019432
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ras-related protein RABA4c-like
Location	Chr04: 21806931 .. 21808884 (+)
RNA-Seq Expression	HG10019432
Synteny	HG10019432

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTAATTTGCAATCCAATTTCAATCAGAAGATTGATTATGTTTTCAAGGTCGTCTTGATCGGGGATTCTGCGGTTGGGAAATCGCAACTCCTTTCTCGTTTTGCTAGGAATGAGTTTAGTTTGGATTCCAAGGCTACAATTGGGGTTGAATTTCAAACCAAGACGCTTGTCATTGACCAGAAAGCTATCAAGGCGCAGATATGGGATACTGCTGGACAGGAAAGGTACAAATCGCCATGTTTCTTAGGGTTTTTCCTTTTCTTTTCGTTTCTTTTCCTTTTTTTGAACGATACTGGATTTTTTTTTTTAACAAAAAGACTTATTAGATTGTGTATTAGTCGTACTGCCTTATTTAATGATATTGGATTTATTTCGACGATGTGTTAGTTCATTGTAATTCTTGAACCTAATAATGGGTTTTGCTAACTTTCCTTTCAGATGATCTCAATGCACCAAATTTTAGTTATCCTTTATGTTTCTGTGAAGATCTTTCTTCATATTGTTGGTTTCAGAATGTTTTATGTTGATGGTTTATCTATATATTTAATTTTACTTCAACTTGTGAAATATTTTTCATCTGATATGACATTTTGTACAACCTTTTCTTATGTCCTGTGTAATAATTAGAATTGATGATATTCTTTGAACTGTGGAAACAATTGTTGTGTAACTTCTTGTTTCTGTCTCATGCTGCTTCCGTTTTTTCCCCCTCCCCTGCCCCTGCTTCATCTTGGAACAATGGGTTTTATGTAGATCGGCTGATATAGATATATATTGTTACTGAATCATAAGCACTATGGACCTGACACGTAACATAATCTGTATCCAATTCAGATTCACCTTCATTCTCATAAAGAAAATCCTCCTTCAGCGGCATGGACTATTGCATGACCTAGAAAATTTGTAAATGTGTGGCCTGAAGGACCTTACAAATTTATAATCACATAATTTATTACAATTTCTTTATCACCAATGTTCAATCCCTTGGGTTGGGGTTCATATTGTTGATGTTTGACTTGGGTATGTTACTTTGCCATAGCCATGCATAGTATAAAGGTATTAGAACTAATCAGTATATTGTGAATGGAATTAGAAAATTGTTACTGGGTGCTGGAACAGAATCTGTTCTATAGTACAACAGTGTCCTGAGTTCTGAGGAGAATTGTTACTGGGTGCAGAGAAGTATGCAACTTTTAAAGGAGGTCTAGCTATGCTGTCGTATTGCAACGATGAGTATAGTTTGAAAGATTACCTGTCTAACACAATATTCGAGGCCTGTTAACGTAGAGTGAATGCTGATGGTTTACATGAATATATGCTAAGAGCAATTAAGACATGATATTCTTTTGAAACATACATCCAGAGCATATTACGTTCCAAATGAGAGTGATTTGTAATTTGTTTATATAGTTATTGTGGTTTCTCTGTGGATTGCCCAAAGTTAATGAATCTGCTCCTTAAAAATCTGTAGATTTTCCTTCTTTTTCTCTTATCAGCGATGGTTTTCAGGTATCGTGCAGTGACAAGTGCATATTACAGAGGTGCCGTGGGGGCAATGCTGGTCTACGACATGACGAAGCGTCAGTCATTCGATCATATAGCTAGGTGGTTAGAGGAACTGCGTGGCCATGCAGACAAGAATATCGTTATCATGCTTATAGGGAATAAATCTGATCTACGTTCTCTTCGTGTTGTGCCTACAGAAGATGCAAAAGAGTTTGCTCAAATGGAGAATCTGTTTTTTATGGAAACATCAGCACTTGAGGCAACTAATGTAGAGATAGCATTCAATACCATACTGACAGAAATTTACCGAGTTATTAGCAGGAAGGCGCTGATTGCAAACGAGGACACTGATTCTGGAGGAAGCTCATCACTCCTCAAAGGAACTAAAATTGTTGTCCCTGGACAAGAGCCCCAACCTGCAAGCTCTGGTTGTTGCAGGAGTTGA

mRNA sequence

ATGTCTAATTTGCAATCCAATTTCAATCAGAAGATTGATTATGTTTTCAAGGTCGTCTTGATCGGGGATTCTGCGGTTGGGAAATCGCAACTCCTTTCTCGTTTTGCTAGGAATGAGTTTAGTTTGGATTCCAAGGCTACAATTGGGGTTGAATTTCAAACCAAGACGCTTGTCATTGACCAGAAAGCTATCAAGGCGCAGATATGGGATACTGCTGGACAGGAAAGGTATCGTGCAGTGACAAGTGCATATTACAGAGGTGCCGTGGGGGCAATGCTGGTCTACGACATGACGAAGCGTCAGTCATTCGATCATATAGCTAGGTGGTTAGAGGAACTGCGTGGCCATGCAGACAAGAATATCGTTATCATGCTTATAGGGAATAAATCTGATCTACGTTCTCTTCGTGTTGTGCCTACAGAAGATGCAAAAGAGTTTGCTCAAATGGAGAATCTGTTTTTTATGGAAACATCAGCACTTGAGGCAACTAATGTAGAGATAGCATTCAATACCATACTGACAGAAATTTACCGAGTTATTAGCAGGAAGGCGCTGATTGCAAACGAGGACACTGATTCTGGAGGAAGCTCATCACTCCTCAAAGGAACTAAAATTGTTGTCCCTGGACAAGAGCCCCAACCTGCAAGCTCTGGTTGTTGCAGGAGTTGA

Coding sequence (CDS)

ATGTCTAATTTGCAATCCAATTTCAATCAGAAGATTGATTATGTTTTCAAGGTCGTCTTGATCGGGGATTCTGCGGTTGGGAAATCGCAACTCCTTTCTCGTTTTGCTAGGAATGAGTTTAGTTTGGATTCCAAGGCTACAATTGGGGTTGAATTTCAAACCAAGACGCTTGTCATTGACCAGAAAGCTATCAAGGCGCAGATATGGGATACTGCTGGACAGGAAAGGTATCGTGCAGTGACAAGTGCATATTACAGAGGTGCCGTGGGGGCAATGCTGGTCTACGACATGACGAAGCGTCAGTCATTCGATCATATAGCTAGGTGGTTAGAGGAACTGCGTGGCCATGCAGACAAGAATATCGTTATCATGCTTATAGGGAATAAATCTGATCTACGTTCTCTTCGTGTTGTGCCTACAGAAGATGCAAAAGAGTTTGCTCAAATGGAGAATCTGTTTTTTATGGAAACATCAGCACTTGAGGCAACTAATGTAGAGATAGCATTCAATACCATACTGACAGAAATTTACCGAGTTATTAGCAGGAAGGCGCTGATTGCAAACGAGGACACTGATTCTGGAGGAAGCTCATCACTCCTCAAAGGAACTAAAATTGTTGTCCCTGGACAAGAGCCCCAACCTGCAAGCTCTGGTTGTTGCAGGAGTTGA

Protein sequence

MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEIAFNTILTEIYRVISRKALIANEDTDSGGSSSLLKGTKIVVPGQEPQPASSGCCRS

Homology

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BLAST of HG10019432 vs. NCBI nr
Match: XP_022998498.1 (ras-related protein RABA4c-like [Cucurbita maxima])

HSP 1 Score: 417.2 bits (1071), Expect = 9.1e-113
Identity = 214/222 (96.40%), Postives = 217/222 (97.75%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDHI RWLEELR HADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHITRWLEELRAHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEIAFNTILTEIYRVI 180
           IVIMLIGNKSDL SLRVVPTEDAKEFAQMENLFFMETSALEATNVE AFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEDTDSGGSSSLLKGTKIVVPGQEPQPASSGCCRS 223
           SRKALIANE+TDSGGSSSLLKGTKIVVPGQEPQPA+SGCCRS
Sbjct: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQPATSGCCRS 222

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BLAST of HG10019432 vs. NCBI nr
Match: XP_008461787.1 (PREDICTED: ras-related protein RABA4c isoform X1 [Cucumis melo])

HSP 1 Score: 416.4 bits (1069), Expect = 1.6e-112
Identity = 214/222 (96.40%), Postives = 218/222 (98.20%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEIAFNTILTEIYRVI 180
           IVIMLIGNKSDL SLRVVPTEDAKEFAQMENLFFMETSALEATNVE AFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEDTDSGGSSSLLKGTKIVVPGQEPQPASSGCCRS 223
           S+KAL+AN++TDSGGSSSLLKGTKIVVPGQEPQ ASSGCCRS
Sbjct: 181 SKKALVANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 222

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BLAST of HG10019432 vs. NCBI nr
Match: XP_023525670.1 (ras-related protein RABA4c-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 414.5 bits (1064), Expect = 5.9e-112
Identity = 213/222 (95.95%), Postives = 217/222 (97.75%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDHIARWLEELR HADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEIAFNTILTEIYRVI 180
           IVIMLIGNKSDL SLRVVPTEDAKEF+QMENLFFMETSALEATNVE AFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFSQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEDTDSGGSSSLLKGTKIVVPGQEPQPASSGCCRS 223
           SRKALIANE+TDSGGSSSLLKGTKIVVPGQEPQ A+SGCCRS
Sbjct: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQSATSGCCRS 222

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BLAST of HG10019432 vs. NCBI nr
Match: XP_022949337.1 (ras-related protein RABA4c-like [Cucurbita moschata] >KAG6606869.1 Ras-related protein RABA4c, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036575.1 Ras-related protein RABA4c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 414.5 bits (1064), Expect = 5.9e-112
Identity = 213/222 (95.95%), Postives = 217/222 (97.75%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDHIARWLEELR HADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEIAFNTILTEIYRVI 180
           IVIMLIGNKSDL SLRVVPTEDAKEFAQMENLFFMETSALEATNVE AFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEDTDSGGSSSLLKGTKIVVPGQEPQPASSGCCRS 223
           SRKALIANE+TDSGG+SSLLKGTKIVVPGQEPQ A+SGCCRS
Sbjct: 181 SRKALIANEETDSGGNSSLLKGTKIVVPGQEPQSATSGCCRS 222

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BLAST of HG10019432 vs. NCBI nr
Match: XP_004149604.1 (ras-related protein RABA4c isoform X1 [Cucumis sativus] >KGN58606.1 hypothetical protein Csa_002054 [Cucumis sativus])

HSP 1 Score: 412.5 bits (1059), Expect = 2.3e-111
Identity = 213/222 (95.95%), Postives = 217/222 (97.75%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDHIARWLEELRGHADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEIAFNTILTEIYRVI 180
           IVIMLIGNKSDL SLRVVPTEDAKEFAQMENL FMETSALEATNVE AFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEDTDSGGSSSLLKGTKIVVPGQEPQPASSGCCRS 223
           S+KALIAN++TDSGGSSSLLKGTKIVVPGQEPQ ASSGCCRS
Sbjct: 181 SKKALIANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 222

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BLAST of HG10019432 vs. ExPASy Swiss-Prot
Match: Q9FE79 (Ras-related protein RABA4c OS=Arabidopsis thaliana OX=3702 GN=RABA4C PE=2 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 2.3e-98
Identity = 178/220 (80.91%), Postives = 201/220 (91.36%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVID 60
           MS  QSNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           +K IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEIAFNTILTEIYRVI 180
           IVIMLIGNK+DL +LR VPTEDAKEFAQ ENLFFMETSAL++ NVE +F T+LTEIYR++
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SRKALIANEDTDSGGSSSLLKGTKIVVPGQEPQPASSGCC 221
           S+K L+ANE+ +SGG SSLL+GTKIVV G+E +    GCC
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCC 220

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BLAST of HG10019432 vs. ExPASy Swiss-Prot
Match: P25766 (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP1 PE=2 SV=2)

HSP 1 Score: 357.8 bits (917), Expect = 8.6e-98
Identity = 180/214 (84.11%), Postives = 198/214 (92.52%), Query Frame = 0


Query: 10  QKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIW 69
           QKIDYVFKVVLIGDSAVGKSQLL+RFARNEF+LDSKATIGVEFQT+TL ID + +KAQIW
Sbjct: 13  QKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIW 72

Query: 70  DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKNIVIMLIGNK 129
           DTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKNIVIMLIGNK
Sbjct: 73  DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNK 132

Query: 130 SDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEIAFNTILTEIYRVISRKALIANE 189
           SDL +LRVVPTEDAKEFA+ ENLFFMETSALE+TNVE AF T+LTEIYR++S+K L+ANE
Sbjct: 133 SDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANE 192

Query: 190 DTDSGGSSSLLKGTKIVVPGQEP-QPASSGCCRS 223
           + DS G+SSLLKGTKIVVPGQEP  P  + CC S
Sbjct: 193 EVDSSGNSSLLKGTKIVVPGQEPAPPTKASCCMS 226

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BLAST of HG10019432 vs. ExPASy Swiss-Prot
Match: Q9LH50 (Ras-related protein RABA4d OS=Arabidopsis thaliana OX=3702 GN=RABA4D PE=1 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 3.3e-97
Identity = 179/220 (81.36%), Postives = 200/220 (90.91%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVID 60
           MSNL  ++NQKIDYVFKVVLIGDSAVGK+QLL+RFARNEFS+DSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
            K +KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDH+A+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEIAFNTILTEIYRVI 180
           IVIMLIGNK DL SLR VPTEDA+EFAQ ENLFFMETSALEATNVE AF TILTEIYR+I
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SRKALIANEDTDSGGSSSLLKGTKIVVPGQEPQPASSGCC 221
           S+K+L A++D D+ G+SSLLKGT+I++P ++      GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEQESGKRGGCC 219

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BLAST of HG10019432 vs. ExPASy Swiss-Prot
Match: Q40191 (Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 6.4e-85
Identity = 161/216 (74.54%), Postives = 186/216 (86.11%), Query Frame = 0


Query: 9   NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQI 68
           N KIDYVFKVVLIGDSAVGKSQ+L+RFARNEFSLDSK+TIGVEFQT+TLVID K +KAQI
Sbjct: 11  NAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQI 70

Query: 69  WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKNIVIMLIGN 128
           WDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDHI RWLEELR HADKNIVI+LIGN
Sbjct: 71  WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGN 130

Query: 129 KSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEIAFNTILTEIYRVISRKALIAN 188
           K DL + R VPTEDAKEFA+ E LFF+ETSALEATNVE AF T+LTEIY ++++K+L A+
Sbjct: 131 KCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAAD 190

Query: 189 EDTDSGGSSSLLKGTKIVVPG--QEPQPASSGCCRS 223
           E   +G S+S L G KI++PG  QE     + CC++
Sbjct: 191 ESQGNGNSAS-LSGQKIIIPGPAQEIPAKRNMCCQA 225

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BLAST of HG10019432 vs. ExPASy Swiss-Prot
Match: Q40522 (Ras-related protein Rab11D OS=Nicotiana tabacum OX=4097 GN=RAB11D PE=2 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.2e-83
Identity = 159/223 (71.30%), Postives = 186/223 (83.41%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVID 60
           M++   + +QKIDYVFKVVLIGDSAVGKSQ+L+RFARNEFSLDSKATIGVEFQT+TL I 
Sbjct: 1   MASGYGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQ 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
            K++KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDHI RWLEELR HAD+N
Sbjct: 61  HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEIAFNTILTEIYRVI 180
           IVIMLIGNK+DL   R VPTEDAKEFAQ E LFF+ETSA+EATN+E AF T+LTEI+ ++
Sbjct: 121 IVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIV 180

Query: 181 SRKALIANEDTDSGGSSSLLKGTKIVVPGQ-EPQPASSGCCRS 223
           ++K L A +D  S G+ + L G KI+VPG  +  P    CC S
Sbjct: 181 NKKNLAA-DDNQSNGNPASLTGKKILVPGPGQVIPEKKACCSS 222

[Close]

BLAST of HG10019432 vs. ExPASy TrEMBL
Match: A0A6J1KGX4 (ras-related protein RABA4c-like OS=Cucurbita maxima OX=3661 GN=LOC111493112 PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 4.4e-113
Identity = 214/222 (96.40%), Postives = 217/222 (97.75%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDHI RWLEELR HADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHITRWLEELRAHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEIAFNTILTEIYRVI 180
           IVIMLIGNKSDL SLRVVPTEDAKEFAQMENLFFMETSALEATNVE AFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEDTDSGGSSSLLKGTKIVVPGQEPQPASSGCCRS 223
           SRKALIANE+TDSGGSSSLLKGTKIVVPGQEPQPA+SGCCRS
Sbjct: 181 SRKALIANEETDSGGSSSLLKGTKIVVPGQEPQPATSGCCRS 222

[Close]

BLAST of HG10019432 vs. ExPASy TrEMBL
Match: A0A1S3CFD0 (ras-related protein RABA4c isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500306 PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 7.6e-113
Identity = 214/222 (96.40%), Postives = 218/222 (98.20%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEIAFNTILTEIYRVI 180
           IVIMLIGNKSDL SLRVVPTEDAKEFAQMENLFFMETSALEATNVE AFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEDTDSGGSSSLLKGTKIVVPGQEPQPASSGCCRS 223
           S+KAL+AN++TDSGGSSSLLKGTKIVVPGQEPQ ASSGCCRS
Sbjct: 181 SKKALVANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 222

[Close]

BLAST of HG10019432 vs. ExPASy TrEMBL
Match: A0A6J1GBR1 (ras-related protein RABA4c-like OS=Cucurbita moschata OX=3662 GN=LOC111452722 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 2.9e-112
Identity = 213/222 (95.95%), Postives = 217/222 (97.75%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RNEFSLDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFTRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDHIARWLEELR HADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRAHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEIAFNTILTEIYRVI 180
           IVIMLIGNKSDL SLRVVPTEDAKEFAQMENLFFMETSALEATNVE AFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEDTDSGGSSSLLKGTKIVVPGQEPQPASSGCCRS 223
           SRKALIANE+TDSGG+SSLLKGTKIVVPGQEPQ A+SGCCRS
Sbjct: 181 SRKALIANEETDSGGNSSLLKGTKIVVPGQEPQSATSGCCRS 222

[Close]

BLAST of HG10019432 vs. ExPASy TrEMBL
Match: A0A0A0LEW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G698470 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.1e-111
Identity = 213/222 (95.95%), Postives = 217/222 (97.75%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVID 60
           MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTL ID
Sbjct: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQ+FDHIARWLEELRGHADKN
Sbjct: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEIAFNTILTEIYRVI 180
           IVIMLIGNKSDL SLRVVPTEDAKEFAQMENL FMETSALEATNVE AFNTILTEIYRVI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVI 180

Query: 181 SRKALIANEDTDSGGSSSLLKGTKIVVPGQEPQPASSGCCRS 223
           S+KALIAN++TDSGGSSSLLKGTKIVVPGQEPQ ASSGCCRS
Sbjct: 181 SKKALIANDETDSGGSSSLLKGTKIVVPGQEPQAASSGCCRS 222

[Close]

BLAST of HG10019432 vs. ExPASy TrEMBL
Match: A0A6J1DGV8 (ras-related protein RABA4d-like OS=Momordica charantia OX=3673 GN=LOC111020375 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 3.0e-109
Identity = 206/222 (92.79%), Postives = 214/222 (96.40%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVID 60
           MSNL SNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RNEFSLDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLNSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           QK IKAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKRQSFDHIARWLEELRGHADKN
Sbjct: 61  QKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLIYDMTKRQSFDHIARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEIAFNTILTEIYRVI 180
           IVIMLIGNKSDL SLRVVPT+DA+EFAQMENLFFMETSALEATNVE AFNTILTEIY+VI
Sbjct: 121 IVIMLIGNKSDLGSLRVVPTDDAREFAQMENLFFMETSALEATNVETAFNTILTEIYQVI 180

Query: 181 SRKALIANEDTDSGGSSSLLKGTKIVVPGQEPQPASSGCCRS 223
           SRKAL+ANED DSGG+SSLLKGTKIVVPGQE   ASSGCCRS
Sbjct: 181 SRKALVANEDADSGGNSSLLKGTKIVVPGQERSAASSGCCRS 222

[Close]

BLAST of HG10019432 vs. TAIR 10
Match: AT5G47960.1 (RAB GTPase homolog A4C )

HSP 1 Score: 359.8 bits (922), Expect = 1.6e-99
Identity = 178/220 (80.91%), Postives = 201/220 (91.36%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVID 60
           MS  QSNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
           +K IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEIAFNTILTEIYRVI 180
           IVIMLIGNK+DL +LR VPTEDAKEFAQ ENLFFMETSAL++ NVE +F T+LTEIYR++
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SRKALIANEDTDSGGSSSLLKGTKIVVPGQEPQPASSGCC 221
           S+K L+ANE+ +SGG SSLL+GTKIVV G+E +    GCC
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCC 220

[Close]

BLAST of HG10019432 vs. TAIR 10
Match: AT3G12160.1 (RAB GTPase homolog A4D )

HSP 1 Score: 355.9 bits (912), Expect = 2.3e-98
Identity = 179/220 (81.36%), Postives = 200/220 (90.91%), Query Frame = 0


Query: 1   MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVID 60
           MSNL  ++NQKIDYVFKVVLIGDSAVGK+QLL+RFARNEFS+DSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKAIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKN 120
            K +KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDH+A+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEIAFNTILTEIYRVI 180
           IVIMLIGNK DL SLR VPTEDA+EFAQ ENLFFMETSALEATNVE AF TILTEIYR+I
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SRKALIANEDTDSGGSSSLLKGTKIVVPGQEPQPASSGCC 221
           S+K+L A++D D+ G+SSLLKGT+I++P ++      GCC
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEQESGKRGGCC 219

[Close]

BLAST of HG10019432 vs. TAIR 10
Match: AT5G65270.1 (RAB GTPase homolog A4A )

HSP 1 Score: 308.1 bits (788), Expect = 5.6e-84
Identity = 157/217 (72.35%), Postives = 185/217 (85.25%), Query Frame = 0


Query: 9   NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQI 68
           +QKIDYVFKVVLIGDSAVGKSQ+L+R+AR+EFSLDSKATIGVEFQT+TLVID K++KAQI
Sbjct: 11  SQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQI 70

Query: 69  WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKNIVIMLIGN 128
           WDTAGQERYRAVTSAYYRGAVGAMLVYD+T+RQ+FDHI RWLEELR HADKNIVI+LIGN
Sbjct: 71  WDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGN 130

Query: 129 KSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEIAFNTILTEIYRVISRKALIAN 188
           KSDL   R +PTEDAKEFA+ E LFF+ETSA  ATNVE AF+T+LTEI+ ++++K+L A+
Sbjct: 131 KSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKSLAAS 190

Query: 189 EDTDSGGSSSLLKGTKIVV---PGQEPQPASSGCCRS 223
           ED ++G   S L G KI +   PGQ     S+ CC S
Sbjct: 191 EDQENGNPGS-LAGKKIDIVPGPGQVIPNKSNMCCNS 226

[Close]

BLAST of HG10019432 vs. TAIR 10
Match: AT4G39990.1 (RAB GTPase homolog A4B )

HSP 1 Score: 305.8 bits (782), Expect = 2.8e-83
Identity = 156/214 (72.90%), Postives = 183/214 (85.51%), Query Frame = 0


Query: 11  KIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWD 70
           K+DYVFKVVLIGDSAVGKSQLL+RFAR+EFS+DSKATIGVEFQT+TL I+QK+IKAQIWD
Sbjct: 13  KVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWD 72

Query: 71  TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKNIVIMLIGNKS 130
           TAGQERYRAVTSAYYRGAVGAMLVYDMTKR++F+HI RWLEELR HADKNIVI+LIGNKS
Sbjct: 73  TAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKS 132

Query: 131 DLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEIAFNTILTEIYRVISRKALIANED 190
           DL   R VPTEDAKEFA+ E LFF+ETSAL ATNVE +FNT++T+IY  +++K L +  D
Sbjct: 133 DLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGD 192

Query: 191 TDSGGSSSLLKGTKIVVP--GQEPQPASSGCCRS 223
           +++ GS   L G KI++P  GQE    +S CC S
Sbjct: 193 SNNPGS---LAGKKILIPGSGQEIPAKTSTCCTS 223

[Close]

BLAST of HG10019432 vs. TAIR 10
Match: AT1G16920.1 (RAB GTPase homolog A1B )

HSP 1 Score: 268.9 bits (686), Expect = 3.7e-72
Identity = 134/208 (64.42%), Postives = 165/208 (79.33%), Query Frame = 0


Query: 13  DYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLVIDQKAIKAQIWDTA 72
           DY+FKVVLIGDS VGKS LLSRF +NEF+L+SK+TIGVEF T+TL +D K +KAQIWDTA
Sbjct: 11  DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTA 70

Query: 73  GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEELRGHADKNIVIMLIGNKSDL 132
           GQERYRA+TSAYYRGAVGA+LVYD+T+R +F+++ RWL+EL+ H D NIV+ML+GNKSDL
Sbjct: 71  GQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDL 130

Query: 133 RSLRVVPTEDAKEFAQMENLFFMETSALEATNVEIAFNTILTEIYRVISRKALIANEDTD 192
           R L  VPTED K +A+ E+L FMETSALEATNVE AF  +LT+IYR+ S+K + A ED  
Sbjct: 131 RHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGED-- 190

Query: 193 SGGSSSLLKGTKIVVPGQEPQPASSGCC 221
             G++S+ KG KI V          GCC
Sbjct: 191 --GNASVPKGEKIEVKNDVSALKKLGCC 214

The following BLAST results are available for this feature:

BLAST of HG10019432 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022998498.1	9.1e-113	96.40	ras-related protein RABA4c-like [Cucurbita maxima]	[more]
XP_008461787.1	1.6e-112	96.40	PREDICTED: ras-related protein RABA4c isoform X1 [Cucumis melo]	[more]
XP_023525670.1	5.9e-112	95.95	ras-related protein RABA4c-like [Cucurbita pepo subsp. pepo]	[more]
XP_022949337.1	5.9e-112	95.95	ras-related protein RABA4c-like [Cucurbita moschata] >KAG6606869.1 Ras-related p...	[more]
XP_004149604.1	2.3e-111	95.95	ras-related protein RABA4c isoform X1 [Cucumis sativus] >KGN58606.1 hypothetical...	[more]

BLAST of HG10019432 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FE79	2.3e-98	80.91	Ras-related protein RABA4c OS=Arabidopsis thaliana OX=3702 GN=RABA4C PE=2 SV=1	[more]
P25766	8.6e-98	84.11	Ras-related protein RGP1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP1 PE=2 S...	[more]
Q9LH50	3.3e-97	81.36	Ras-related protein RABA4d OS=Arabidopsis thaliana OX=3702 GN=RABA4D PE=1 SV=1	[more]
Q40191	6.4e-85	74.54	Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1	[more]
Q40522	1.2e-83	71.30	Ras-related protein Rab11D OS=Nicotiana tabacum OX=4097 GN=RAB11D PE=2 SV=1	[more]

BLAST of HG10019432 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KGX4	4.4e-113	96.40	ras-related protein RABA4c-like OS=Cucurbita maxima OX=3661 GN=LOC111493112 PE=4...	[more]
A0A1S3CFD0	7.6e-113	96.40	ras-related protein RABA4c isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500306 PE...	[more]
A0A6J1GBR1	2.9e-112	95.95	ras-related protein RABA4c-like OS=Cucurbita moschata OX=3662 GN=LOC111452722 PE...	[more]
A0A0A0LEW7	1.1e-111	95.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G698470 PE=4 SV=1	[more]
A0A6J1DGV8	3.0e-109	92.79	ras-related protein RABA4d-like OS=Momordica charantia OX=3673 GN=LOC111020375 P...	[more]

BLAST of HG10019432 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47960.1	1.6e-99	80.91	RAB GTPase homolog A4C	[more]
AT3G12160.1	2.3e-98	81.36	RAB GTPase homolog A4D	[more]
AT5G65270.1	5.6e-84	72.35	RAB GTPase homolog A4A	[more]
AT4G39990.1	2.8e-83	72.90	RAB GTPase homolog A4B	[more]
AT1G16920.1	3.7e-72	64.42	RAB GTPase homolog A1B	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 39..55 score: 34.83 coord: 119..132 score: 51.17 coord: 16..37 score: 52.33 coord: 57..79 score: 52.46 coord: 154..176 score: 42.96
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 21..215 e-value: 4.7E-5 score: 22.7
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 16..179 e-value: 2.5E-103 score: 359.3
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 13..179 e-value: 1.8E-26 score: 104.0
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..181 e-value: 0.0098 score: -4.1
None	No IPR available	PANTHER	PTHR47978:SF13	RAS-RELATED PROTEIN RABA4C	coord: 1..221
None	No IPR available	PANTHER	PTHR47978	FAMILY NOT NAMED	coord: 1..221
None	No IPR available	PROSITE	PS51419	RAB	coord: 11..220 score: 34.709286
None	No IPR available	PROSITE	PS51420	RHO	coord: 9..184 score: 9.107821
None	No IPR available	CDD	cd01868	Rab11_like	coord: 13..177 e-value: 5.22897E-126 score: 351.092
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 18..175 e-value: 9.5E-11 score: 18.3
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 17..177 e-value: 2.7E-60 score: 202.6
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 10..222 score: 16.285233
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 15..172 e-value: 4.7E-36 score: 122.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 8..220 e-value: 4.1E-69 score: 233.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10019432.1	HG10019432.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005768	endosome
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding