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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCTTCCTCTATGAGATTCTCTCCTTCTGCTGCTGTTGTTTTGGTACTTGCAATGGTGTGCTTAGAAATGAAGAAGGTTCATGGCATTGAGGATGAGATAGCTCCAATGCCTGCTATGGCTGCTGGGTCTGCATTTCCTTATACTGTTCCCTTTGATTTTAATTCTGTTTTCCCTCTTTTGCTCTGTATTTTTGGTGTATAA mRNA sequence ATGGCTTCCTCTATGAGATTCTCTCCTTCTGCTGCTGTTGTTTTGGTACTTGCAATGGTGTGCTTAGAAATGAAGAAGGTTCATGGCATTGAGGATGAGATAGCTCCAATGCCTGCTATGGCTGCTGGGTCTGCATTTCCTTATACTGTTCCCTTTGATTTTAATTCTGTTTTCCCTCTTTTGCTCTGTATTTTTGGTGTATAA Coding sequence (CDS) ATGGCTTCCTCTATGAGATTCTCTCCTTCTGCTGCTGTTGTTTTGGTACTTGCAATGGTGTGCTTAGAAATGAAGAAGGTTCATGGCATTGAGGATGAGATAGCTCCAATGCCTGCTATGGCTGCTGGGTCTGCATTTCCTTATACTGTTCCCTTTGATTTTAATTCTGTTTTCCCTCTTTTGCTCTGTATTTTTGGTGTATAA Protein sequence MASSMRFSPSAAVVLVLAMVCLEMKKVHGIEDEIAPMPAMAAGSAFPYTVPFDFNSVFPLLLCIFGV
Homology
BLAST of HG10019426 vs. NCBI nr
Match: KGN58599.1 (hypothetical protein Csa_001638 [Cucumis sativus]) HSP 1 Score: 85.9 bits (211), Expect = 1.5e-13 Identity = 49/69 (71.01%), Postives = 53/69 (76.81%), Query Frame = 0
Query: 1 MASSMRFS--PSAAVVLVLAMVCLEMKKVHGIEDEIAPMPAMAAGSAFPYTVPFDFNSVF 60
MASSMRF AVVLVLAMV +EMKKV IEDE+APMPAMAAG AFP +V FN V
Sbjct: 1 MASSMRFPHFVVVAVVLVLAMVSIEMKKVDSIEDELAPMPAMAAGFAFPSSVALGFNFVV 60
Query: 61 PLLLCIFGV 68
PLLLC+FGV
Sbjct: 61 PLLLCVFGV 69
BLAST of HG10019426 vs. NCBI nr
Match: KAG6581583.1 (hypothetical protein SDJN03_21585, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 81.6 bits (200), Expect = 2.7e-12 Identity = 47/68 (69.12%), Postives = 51/68 (75.00%), Query Frame = 0
Query: 1 MASSMRFSP--SAAVVLVLAMVCLEMKKVHGIEDEIAPMPAMAAGSAFPYTVPFDFNSVF 60
MA SMR + A VL LAMVC EMKKVHGIE EI+PMPAMAAGSA P TV + FN+VF
Sbjct: 1 MAPSMRLPHYYATAAVLALAMVCFEMKKVHGIEAEISPMPAMAAGSASPSTVAYAFNAVF 60
Query: 61 PLLLCIFG 67
P LLC FG
Sbjct: 61 P-LLCTFG 67
BLAST of HG10019426 vs. ExPASy TrEMBL
Match: A0A0A0LCE5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G697920 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 7.1e-14 Identity = 49/69 (71.01%), Postives = 53/69 (76.81%), Query Frame = 0
Query: 1 MASSMRFS--PSAAVVLVLAMVCLEMKKVHGIEDEIAPMPAMAAGSAFPYTVPFDFNSVF 60
MASSMRF AVVLVLAMV +EMKKV IEDE+APMPAMAAG AFP +V FN V
Sbjct: 1 MASSMRFPHFVVVAVVLVLAMVSIEMKKVDSIEDELAPMPAMAAGFAFPSSVALGFNFVV 60
Query: 61 PLLLCIFGV 68
PLLLC+FGV
Sbjct: 61 PLLLCVFGV 69
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN58599.1 | 1.5e-13 | 71.01 | hypothetical protein Csa_001638 [Cucumis sativus] | [more] |
| KAG6581583.1 | 2.7e-12 | 69.12 | hypothetical protein SDJN03_21585, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LCE5 | 7.1e-14 | 71.01 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G697920 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0016020 |
membrane |
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