
HG10019421 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGCTGCCGAGGAGCAAGAAGCCGTTCTCTTCCACTCCTATCCATGTGCTTATTACGTACAAAGCCCCTCTACCCTCTCCCACGCCAACAGCTCCGACATCCGAAACCCCGCCGAGTCCTCGGCTTGCCACTCGCCTCTTCCCTCAGACACTTTTCCCAACGTCCACCACCACCACCGCAACCCGACTCAAGAAGCCTCTCGCTTCACTCTCTCCCACTATTCATCCTCCCGTGGCTCAAACCATGGGGCCGGGACCGACAATGGCGAGGCTCGCTTGATAGTTGGTCGTGGCAATGGTCGAGATTGTGACGAGGAGCAGGAGGAGGATGGGGACGGAGGCGAGGAAGGGTATTATGGGAAGAAAAAAAGAGGTTGTTGGAAGAGGTATTTTACGTATAGGAATTCGGATTCTAATGCATGGATTTGCTTGCAGTTGAGTTGGAGGGCAATTTTCAGTATGGGAATTGCTTTGCTTGTGTTTTACATTGTCACTAACCCTCCTTCACCAATCATTTCTGTTAAGGTAACTTTGCTTCTTCCCCCCCCCAATTTGTTTGTTTATATATATATATATATATATATTTATTTATTTATTTTTTAAATATTGGTACACAATTATTGAAATATATATTTATAGATATATTTCCGTCGTATTACGATCGCATGAGCGTATAATTTGACCATACTTATGTATATATACTATAGGAACTTTATATATATTACACATTTGTTTGGTTGGATTTCATATGGATGTTGTTCTTCAGTGAGAAATCATATTTTTCATTAAATATATTTATCATTGCATTCATGAAAAATGTAAGAAAGTAGGTCTAGGATGATATGTCCTTTTTTTCAATGTTTTATTCAAATAAATAATGTATATATGGTTTAACCTTTTCTTTTCTTCATATTTTTATTTAGTAAATGTATTCATAAATAGGATAAATTGGTACATATTTCAATTATATAATTTTCATTGTCTTTGAATATTGAGAATGATGGATAAGTAAACATATAAAAGTTAGTAAGAATGAAATAAATTTTCAAAAAATAATAAGGTTATATAAGAGAATAAAAAGATTTTTTCATGTCTTAAATGTTAGATGAGGAATTAGATAAATTTCAGTTTTAGATGGTCCAATTTTTTCTTAAACTTTATTTATTTTTTGGATAATTCATTATCATACAAATGTAAACTTATCATAACTAATTCGAGTATTCACCAACGTTGAGGGTATAATTGACCCTTTTTTCAAAATACAAGGGTCTAAAAATTATATGAGTAAAATAAGTACTAAATTAAAGAAAAGAAACTCAACTATATTAAAGACAAAATCATATATTTGGTTTTTTTAACTACAATATATTATGTGTCAATGTTGGAAATGCACCTAGTTTGAATTACTTTTATAGGTTAAATTTGAAATTTATTCAAGAAGTTTAAGCTCCAATTTAGTTTTTAATTTTCAGTTTTTTTTCATAACATCTTCAAAATTATGAATTCTAAATTGTGTTATATAAAGTTAAAAATATCATTTTAGTCACACTATACTTTGGGTATCATTTTATTTGGTCTTTAAAGTACTTTTAATCATCCGATCTACTTTTAGTTACTACAATTTCAATCAATAGATATAATATTTTTATTTTAAATAAACTTTAAATTTAGTCTTCCAAAATTTAATTTTTATTGAAATTTGTTAAATAATAATATCATACGTGAGAAAAGATACTACGTGAATATATATATATATTTTTAAAAAAACAACAAATTAACTATATAGACTACTTTTAAGATTTATTAAAAACACAACAACTAAAATGGAACAATATGTATAATACAAAGGACCGAAATGGGTAATTTAAACTATATTGGTTTAATCTCTACCATTAAACTTTTTTTTTTTTTTTAGAGTATCCATTTCATCATTTAATATATTACTGATATGAAATTTGAAAATGTGTCTAATAGATCTTTATGCATCTAATTTTATGTTTAATAATTATAGTATTCGTAATTTTAAAAAAAGATTTCATACAAATAAATGATTTATTAGATACAAAATAGAAAATTAAAAATATTTATAGAATTAAAAAAAAGGATGAAAGTATGGATATGGATGCAGGTGGGAGAAATAGAAGAGTTCATGCTAGGGGAAGGAGTGGACAAAACAGGGGTTGGAACTAAGATTCTAACATGCAATTGCACAATGGATGTAATTGTGGATAACAATTCTAAGCTTTTTGGCCTTCACATTCTTCCTCCATCTCTTCATATGTCTTTTGGGCCTCTTCCTATTGCAACTTCACAAGTAACCCCTCCTTCCCTAATTTATATATATAGAGTTAATTTTTAAATATAGAAAAATGAGTCAAAACTATTTACAAATATAAAAAAAATTATTGTCTATCAGCGATAGACTGCGATACAATTCTATCGCTTGAGCGATAGATTGCGATATAGTGATAGAAGTCTATCGCGAATAGATATTGAAATTTTTATATATTTGTAAATAGTTTGATATTTTTTCTATTTATAGTAATTTCCCTATATATATACACACCAAGTGAGCTTCAATTAAAGTTATATGAAGATATGGTTTTTTTTTTTTTTTGTTTTAACATTTTTCATCTTTTATAAATTTTTTTGTGTTATATATATATAGTTTGTTTATCATACCTTAATTTGGGAGTTCTTTTTTCCTCGATATTTCAAGCTTTATAACGTATTATTAATATATATATATACAAGTTTTAAAATTAAAAAAATATTTTAGTTTTAAAGTAACTATCTCTTGAAGAGATGACATTATTTCCAATTAAGTTTTCTAGAGAATTTTTTTTAGTTAATTGTTTAGTAAAAGATTCATTTTAAACCAAAAATACATTCAAAATTTATAAAAATTTATAATTGTATTAAAATAAAAAAAAATTATATTAGAAAAAATTTGTATAATTTTTTATGAGTTGGAACTTGAAGTTGCATAATATATACCCTGGTTAAAATGATTAATACCACTTTTGTTATTTTCAAAAAAATTTATTTGAAATAAGTGAAACTTTAAACATATTTGAGAATGATATATTAAAAAATAATTAAATTCACTTTTGTCATTTCTCAATAAAAAAAATTAATTTAATCCTATAAATTATGTGGGGTTATTGAATTAATTAGGGTCCAAGATTGTATGCTGAGAGTGGAACGACGACGTTTCAATTAAGCGTGGGCATTAGCAACAAGCCGATGTACGGTGCGGGAAGGGACATGGAAGACAAGCTTGAATCAGGAACGGGATTGGAGCTTACAATTCGAGTCAATTTCATTTCAAATTATAGAGTAGTTTGGAAAATCATAAGGCCCCACTTTCATCGTCGTGTCCAATGCTTATTGATCCTTGGAAAAGCCTACGATAGGAAGCGTCACACCCGATCCTTCAATAGTACTTGCTTAACTTCTTCATGA ATGGAGGCTGCCGAGGAGCAAGAAGCCGTTCTCTTCCACTCCTATCCATGTGCTTATTACGTACAAAGCCCCTCTACCCTCTCCCACGCCAACAGCTCCGACATCCGAAACCCCGCCGAGTCCTCGGCTTGCCACTCGCCTCTTCCCTCAGACACTTTTCCCAACGTCCACCACCACCACCGCAACCCGACTCAAGAAGCCTCTCGCTTCACTCTCTCCCACTATTCATCCTCCCGTGGCTCAAACCATGGGGCCGGGACCGACAATGGCGAGGCTCGCTTGATAGTTGGTCGTGGCAATGGTCGAGATTGTGACGAGGAGCAGGAGGAGGATGGGGACGGAGGCGAGGAAGGGTATTATGGGAAGAAAAAAAGAGGTTGTTGGAAGAGGTATTTTACGTATAGGAATTCGGATTCTAATGCATGGATTTGCTTGCAGTTGAGTTGGAGGGCAATTTTCAGTATGGGAATTGCTTTGCTTGTGTTTTACATTGTCACTAACCCTCCTTCACCAATCATTTCTGTTAAGGTGGGAGAAATAGAAGAGTTCATGCTAGGGGAAGGAGTGGACAAAACAGGGGTTGGAACTAAGATTCTAACATGCAATTGCACAATGGATGTAATTGTGGATAACAATTCTAAGCTTTTTGGCCTTCACATTCTTCCTCCATCTCTTCATATGTCTTTTGGGCCTCTTCCTATTGCAACTTCACAAGGTCCAAGATTGTATGCTGAGAGTGGAACGACGACGTTTCAATTAAGCGTGGGCATTAGCAACAAGCCGATGTACGGTGCGGGAAGGGACATGGAAGACAAGCTTGAATCAGGAACGGGATTGGAGCTTACAATTCGAGTCAATTTCATTTCAAATTATAGAGTAGTTTGGAAAATCATAAGGCCCCACTTTCATCGTCGTGTCCAATGCTTATTGATCCTTGGAAAAGCCTACGATAGGAAGCGTCACACCCGATCCTTCAATAGTACTTGCTTAACTTCTTCATGA ATGGAGGCTGCCGAGGAGCAAGAAGCCGTTCTCTTCCACTCCTATCCATGTGCTTATTACGTACAAAGCCCCTCTACCCTCTCCCACGCCAACAGCTCCGACATCCGAAACCCCGCCGAGTCCTCGGCTTGCCACTCGCCTCTTCCCTCAGACACTTTTCCCAACGTCCACCACCACCACCGCAACCCGACTCAAGAAGCCTCTCGCTTCACTCTCTCCCACTATTCATCCTCCCGTGGCTCAAACCATGGGGCCGGGACCGACAATGGCGAGGCTCGCTTGATAGTTGGTCGTGGCAATGGTCGAGATTGTGACGAGGAGCAGGAGGAGGATGGGGACGGAGGCGAGGAAGGGTATTATGGGAAGAAAAAAAGAGGTTGTTGGAAGAGGTATTTTACGTATAGGAATTCGGATTCTAATGCATGGATTTGCTTGCAGTTGAGTTGGAGGGCAATTTTCAGTATGGGAATTGCTTTGCTTGTGTTTTACATTGTCACTAACCCTCCTTCACCAATCATTTCTGTTAAGGTGGGAGAAATAGAAGAGTTCATGCTAGGGGAAGGAGTGGACAAAACAGGGGTTGGAACTAAGATTCTAACATGCAATTGCACAATGGATGTAATTGTGGATAACAATTCTAAGCTTTTTGGCCTTCACATTCTTCCTCCATCTCTTCATATGTCTTTTGGGCCTCTTCCTATTGCAACTTCACAAGGTCCAAGATTGTATGCTGAGAGTGGAACGACGACGTTTCAATTAAGCGTGGGCATTAGCAACAAGCCGATGTACGGTGCGGGAAGGGACATGGAAGACAAGCTTGAATCAGGAACGGGATTGGAGCTTACAATTCGAGTCAATTTCATTTCAAATTATAGAGTAGTTTGGAAAATCATAAGGCCCCACTTTCATCGTCGTGTCCAATGCTTATTGATCCTTGGAAAAGCCTACGATAGGAAGCGTCACACCCGATCCTTCAATAGTACTTGCTTAACTTCTTCATGA MEAAEEQEAVLFHSYPCAYYVQSPSTLSHANSSDIRNPAESSACHSPLPSDTFPNVHHHHRNPTQEASRFTLSHYSSSRGSNHGAGTDNGEARLIVGRGNGRDCDEEQEEDGDGGEEGYYGKKKRGCWKRYFTYRNSDSNAWICLQLSWRAIFSMGIALLVFYIVTNPPSPIISVKVGEIEEFMLGEGVDKTGVGTKILTCNCTMDVIVDNNSKLFGLHILPPSLHMSFGPLPIATSQGPRLYAESGTTTFQLSVGISNKPMYGAGRDMEDKLESGTGLELTIRVNFISNYRVVWKIIRPHFHRRVQCLLILGKAYDRKRHTRSFNSTCLTSS Homology
BLAST of HG10019421 vs. NCBI nr
Match: XP_038905771.1 (uncharacterized protein LOC120091726 [Benincasa hispida]) HSP 1 Score: 639.8 bits (1649), Expect = 1.3e-179 Identity = 315/335 (94.03%), Postives = 321/335 (95.82%), Query Frame = 0
BLAST of HG10019421 vs. NCBI nr
Match: XP_008461795.2 (PREDICTED: uncharacterized protein LOC103500312 [Cucumis melo]) HSP 1 Score: 614.4 bits (1583), Expect = 5.9e-172 Identity = 302/334 (90.42%), Postives = 315/334 (94.31%), Query Frame = 0
BLAST of HG10019421 vs. NCBI nr
Match: XP_004149613.1 (uncharacterized protein LOC101209149 [Cucumis sativus] >KGN58592.1 hypothetical protein Csa_002328 [Cucumis sativus]) HSP 1 Score: 609.8 bits (1571), Expect = 1.4e-170 Identity = 301/333 (90.39%), Postives = 311/333 (93.39%), Query Frame = 0
BLAST of HG10019421 vs. NCBI nr
Match: XP_022152674.1 (uncharacterized protein LOC111020336 [Momordica charantia]) HSP 1 Score: 575.9 bits (1483), Expect = 2.3e-160 Identity = 290/333 (87.09%), Postives = 302/333 (90.69%), Query Frame = 0
BLAST of HG10019421 vs. NCBI nr
Match: XP_022934269.1 (uncharacterized protein LOC111441481 [Cucurbita moschata]) HSP 1 Score: 571.6 bits (1472), Expect = 4.4e-159 Identity = 282/334 (84.43%), Postives = 304/334 (91.02%), Query Frame = 0
BLAST of HG10019421 vs. ExPASy TrEMBL
Match: A0A1S3CFE9 (uncharacterized protein LOC103500312 OS=Cucumis melo OX=3656 GN=LOC103500312 PE=4 SV=1) HSP 1 Score: 614.4 bits (1583), Expect = 2.8e-172 Identity = 302/334 (90.42%), Postives = 315/334 (94.31%), Query Frame = 0
BLAST of HG10019421 vs. ExPASy TrEMBL
Match: A0A0A0LD21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G696870 PE=4 SV=1) HSP 1 Score: 609.8 bits (1571), Expect = 7.0e-171 Identity = 301/333 (90.39%), Postives = 311/333 (93.39%), Query Frame = 0
BLAST of HG10019421 vs. ExPASy TrEMBL
Match: A0A6J1DGR2 (uncharacterized protein LOC111020336 OS=Momordica charantia OX=3673 GN=LOC111020336 PE=4 SV=1) HSP 1 Score: 575.9 bits (1483), Expect = 1.1e-160 Identity = 290/333 (87.09%), Postives = 302/333 (90.69%), Query Frame = 0
BLAST of HG10019421 vs. ExPASy TrEMBL
Match: A0A6J1F239 (uncharacterized protein LOC111441481 OS=Cucurbita moschata OX=3662 GN=LOC111441481 PE=4 SV=1) HSP 1 Score: 571.6 bits (1472), Expect = 2.1e-159 Identity = 282/334 (84.43%), Postives = 304/334 (91.02%), Query Frame = 0
BLAST of HG10019421 vs. ExPASy TrEMBL
Match: A0A6J1J6W9 (uncharacterized protein LOC111481909 OS=Cucurbita maxima OX=3661 GN=LOC111481909 PE=4 SV=1) HSP 1 Score: 563.9 bits (1452), Expect = 4.4e-157 Identity = 280/334 (83.83%), Postives = 301/334 (90.12%), Query Frame = 0
BLAST of HG10019421 vs. TAIR 10
Match: AT3G08490.1 (BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein, group 2 (TAIR:AT3G24600.1); Has 161 Blast hits to 158 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 209.9 bits (533), Expect = 3.1e-54 Identity = 103/195 (52.82%), Postives = 134/195 (68.72%), Query Frame = 0
BLAST of HG10019421 vs. TAIR 10
Match: AT3G24600.1 (Late embryogenesis abundant protein, group 2 ) HSP 1 Score: 77.8 bits (190), Expect = 1.8e-14 Identity = 48/163 (29.45%), Postives = 81/163 (49.69%), Query Frame = 0
BLAST of HG10019421 vs. TAIR 10
Match: AT5G42860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G45688.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 68.9 bits (167), Expect = 8.5e-12 Identity = 49/191 (25.65%), Postives = 87/191 (45.55%), Query Frame = 0
BLAST of HG10019421 vs. TAIR 10
Match: AT1G45688.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1); Has 258 Blast hits to 242 proteins in 39 species: Archae - 0; Bacteria - 11; Metazoa - 10; Fungi - 14; Plants - 198; Viruses - 17; Other Eukaryotes - 8 (source: NCBI BLink). ) HSP 1 Score: 57.4 bits (137), Expect = 2.6e-08 Identity = 75/317 (23.66%), Postives = 128/317 (40.38%), Query Frame = 0
BLAST of HG10019421 vs. TAIR 10
Match: AT1G45688.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 45.1 bits (105), Expect = 1.3e-04 Identity = 58/222 (26.13%), Postives = 89/222 (40.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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