HG10019327 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10019327
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Zinc finger, RING-CH-type
Location	Chr04: 20424211 .. 20428433 (+)
RNA-Seq Expression	HG10019327
Synteny	HG10019327

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCACGCTGTAGGATTTGCCACGAAGAAGAATTCGAAAGCCCCTTCCAACTTGAAGCCCCCTGTTCTTGTTCAGGTACCATCAAGGTAACACCAAATTTTCTAAACCCATCAATTTTTTCTTCTTCTTCTTCTTCGAGTTTTGAATTTGATTTGGTTTTTTATTTCTGGGTTTTCTTTTTTCAGTTCGCTCACAGAGATTGTATTCAGAGATGGTGCAGCGAAAAAGGCAGCACAGTTTGTGAAATTTGTCTCCAGGTTCGATTACTTTTTTCTTTTAATAATTATTTTTCTTTCTGATTTTTGAGTTTCTGGGTCGATTTTTTTGTACGAAATCGGAAGTGGGTCTTCGTTGATTTTGAATTTTGGAGTCTCTAAACTTGTGTTCTGGGGCTCTGTAATCGGTTTCTTCTCTGCTCTGTTTTTTAGGATATGATTTTAATCTATGAAGATTTAATAAAATTAAAAAAAAAAAAAAAAAATTGGGAAAGGGGAAAGAAGTTTTGGGTATGTAATCCTATGGGATTCTTAGACAGTGGAATTCCTCTTTTTCTTTGAGTTCAAGTCTCTCTCTGTTCCTAAAGTTGACCTTTCAAACTCCCATAAAGTTGAGTTATTTTGCTTCTATAACATTTTATTTTATTTACAATTTTAATCTTAATACTACTCTTTATTTTTTCCCCCCCTAAAGATTACTGTTTCAATTTAATGAAAGATTTTAATGCGTTATTTAATGGAAACTGGACATTAACAGGTATTTTGTTAAAAGGAAAACAATTCAACTTTAAGAACAGTAAATTGGAAATTTCAGTTTAGAGTTGTAATACTTGGGGAAAAAATACATTAAATACTAAATGTTTTTTTTTTATTATTATTATTAATTTGCGTTTAGAAATTTTAAATAAATAAGAGTCTATCGAATAAACAATATTTAAATCTTTTATGTTGGTCACAAGTCTTCTGACTACTCCACGTACTGTTTTGAATTTATTATATATATATTTTAATTTTCAAAATGAAGAAAGAAATCAAGAATATAAAAAGATATATTTTCTTAATTCTCTCAGAATTACGAACCTGGATATACTGCACCTTCTAAGAAGCCTCAACACGCCGATCCAGGTGTCACCATTAGGTATTTCTTTTATTTTCCCTGTTACTTTATATATATATATATTGAGAGAGAGAGAAAACATACGTTGTTTCTATCTTCTCATTTGGTTTATTCATTTTAAAATATTACACTTTTACTTATAGATTTATTTTGATTTTGATTTGATTTTTAATTTTTAAAATGTTATATTATATCTTAAATTTTAAATTAGGTTAATATTTCTATTTGGCTCCTAAATTTCAAATTTTCAAAATTACCCACTTACAATTTGATTTTGCCTCTCTATATAATTAATTTAAAAGAATTATAATTAATTAATTTTCATTAATTTTCTTCCAACACTATTAATAAAATATCAATTTGTAGTTATTTTTATTTAATTAACTTGAATTTAACGTTAAAAAGCAAAGTAAATTTGCTTTAAAAAAAATAGTAAACATTAGCAAAACTTCGGATTTTAAAGGTAAATTATTGAAACCAAATGAATTCATGGGCGAAAATGTAAACATTTTAAAATTCAGGACTAAACTTATGTTAAAATTAAAACTTATAATAAATAGAAATTAGGTCCAAAACACACTAAAAAGGGTTTTTTTTTTTTTCTTTTTTTTCAAAATTTTTTAATTTCAATGTGCTCCCCAGACTGTACTGCGATGAAAATTGCGAAATTTCTTAAAGCACGAGCCGGACATGCTTTACAGCCAATTCATCGGCTCTGAGGAATTAAAATAAAATAAAATAGAATTGAATTAATAAACGGAGATGGAAAATAAAAATATATATACACGATTTGGTTGACAGGGATAGTGTGGAAATCCCGAGAAGCGAGGACGAAGAGGCGGCAGAGCCGGCATCGCCACCCGATGACGGCGGCGCGTCGATACTCGGCTGCTCCACCACCGCTGACCGCGGTGCCTCCTGCTGTAAATCCGTCGCTCTCACCGTAAGTTATTTTTTAATCAAGTCAATGAATCTCCTCTGCCCTTTTTCTCGCTTTCTTCTAATAGATTCTAAAATTTATGTTTAATGTATGAATGGGTGTAACTTATCATAGACTAGATCTAGTACAGAAAATTGAATAAGCTCAAAGGCTTACACAACATTAAAAATCATCCTTTGCAAATAAATAAATAAAAACATTAAAAATCACACCTAACCTAATTTGAACTTTTGCTCTGTTTTTTTCTTTTTAAAAAATTAAAATCATCGTCAAATTGATTTTTGACTTATGAGTAGTGTTGAAATTATATTGAAAAAGGTTAGTGTGTCCAAGCCACAAATAACCTCATCTATTATCCAAATTCCCAACTCATCACCAAAATTCATAAACCCAACCTAACAAAAACATAATATATAATAATAAGGAAAATAATAAAGAAATTTTTTTTAAAAAAAAAAAAAAAAGTCCAACTATTTATAGAAAATAGCAAAAAAAAAAAAAAAATACTGATGGACATTGATAGACTTCTATTATTTCTATCAGGAGTAGACTTCTATCATGCTCTATTACAATTATTTAAAAATTTTGCTATTTTGTATAAATAGTTTTTCTTATTTTTTATTTTTTATTTTTAAGAATTTTCCTAATAATAGTACCTACAGAGATAATTTTATCCTACCATTTGAAATGTTCCAGTCTCACTATAATTTTTTAAATAATAATTTTCATCAAAAGTATGAGATTAAATTGTTACTTTGATGATGGAAATGTTTTTCGTTTTTTTATTTTTTTAATTTTTTGAAAAAGTAGATAAATTTAAAACTCAATTGTGATAGGATAGTTAAATAATTATGGGAGAAGAAGAATTGAACAGACGGTGAATGAAAAAGGAAGGCTTTATAATTTCCGTAAGCATTGAAATGAGTAGGGGTTGTATTGGTGCGAAGCCCATTATATGAACAAAGCCTGATTGCTACATTATATCATAAAAATAAAATCTAAGTGGGTGTAATTTACCACTACATAATTGGAAATCATTATGCCAAACACTAACTTCATTATTTTTTCTAATTCCACCCACTATTATATGTTAAATTTATTTATTTATTTAGTAATTTTAACTTAATGTCTTTTTATTTAATATAAATGTCTAAAAGGTGAAATTTCTTGGTGGGGTTGGCTTGGCTATCATTGAAACCTTACTCAATTTAAAACTATATTGTAAAAATAATATTAATAATAATAATATAATGTAGCTCACCAACCCAACAAATAAGGGTTAGCCCCTAGCAGCCTACCATCACTTTCCTCAGCTACTATTTCTTTTTTCCCTAAAAATTTTCAAAAAAATAATTTTACCCTTTTGATACTAAGATTCCCTTATGACTTTATAAAAGTTCACATTTGTATTTTCATTTTATTTTATGCAGTTTACTTTAGTGTTGTTGGTGAGACATTTCTATGAAGTGGTTGCTGTTGGCACTGCAGAGTATCCATTTACACTTGCCACTGTGAGTACTCGACTCGATTTGATTCAATTCGGTCTATGTTCGAGAGCAATATTTTGGGCAAATTACAAAAGTTACCCTTGAAAGTATGGTGGTAGTTGCAATTACACTCTCAAACTTATAATAGTTATAAAAATTGGACCCTCAAACGATAAAAATTGAATCTTCAAACTTAAACAATTGTTACAATTTCTACAAGCATGTAGGTTCGAGGGTTCAATTTTAACATTTATATAAGTTTAAAGGCTCAATTTTTATTATTAAAAGTTTGAGGGTATAATTGCAACTAACCACTCGTTGCCCTATTATTTTTAAGTCAGTTACAGGAGGAAGATATACTGTAATTAAGTGTTTTGTCGTGTGTATTTGTTTTAGGTGCTTATTTTAAGAGCAAGTGGAATTATTTTTCCTATGTACGTGATAATTCGAATGATCACTGCCATTCAAAACAGTGTTCGTCAAAATCGGTATCAGTATCAATATCGGAATCATGAGGTGAGTTTTTTTTTTCTTTTTGTTTTGAAAGCCAAGAGAAGGGGAAAAAGTTTCCATGGTTGACTGAAAGTTTTTTGTTATTGTGTTTGAAATAGGATTCTGATGATGATGATGATATTTCAAGCTTTGAAGATGATGATAGAAGGCTGCATCATATTGTCTAA

mRNA sequence

ATGTCTCACGCTGTAGGATTTGCCACGAAGAAGAATTCGAAAGCCCCTTCCAACTTGAAGCCCCCTGTTCTTGTTCAGTTCGCTCACAGAGATTGTATTCAGAGATGGTGCAGCGAAAAAGGCAGCACAGTTTGTGAAATTTGTCTCCAGAATTACGAACCTGGATATACTGCACCTTCTAAGAAGCCTCAACACGCCGATCCAGGTGTCACCATTAGGGATAGTGTGGAAATCCCGAGAAGCGAGGACGAAGAGGCGGCAGAGCCGGCATCGCCACCCGATGACGGCGGCGCGTCGATACTCGGCTGCTCCACCACCGCTGACCGCGGTGCCTCCTGCTGTAAATCCGTCGCTCTCACCTTTACTTTAGTGTTGTTGGTGAGACATTTCTATGAAGTGGTTGCTGTTGGCACTGCAGAGTATCCATTTACACTTGCCACTGTGCTTATTTTAAGAGCAAGTGGAATTATTTTTCCTATGTACGTGATAATTCGAATGATCACTGCCATTCAAAACAGTGTTCGTCAAAATCGGTATCAGTATCAATATCGGAATCATGAGGATTCTGATGATGATGATGATATTTCAAGCTTTGAAGATGATGATAGAAGGCTGCATCATATTGTCTAA

Coding sequence (CDS)

ATGTCTCACGCTGTAGGATTTGCCACGAAGAAGAATTCGAAAGCCCCTTCCAACTTGAAGCCCCCTGTTCTTGTTCAGTTCGCTCACAGAGATTGTATTCAGAGATGGTGCAGCGAAAAAGGCAGCACAGTTTGTGAAATTTGTCTCCAGAATTACGAACCTGGATATACTGCACCTTCTAAGAAGCCTCAACACGCCGATCCAGGTGTCACCATTAGGGATAGTGTGGAAATCCCGAGAAGCGAGGACGAAGAGGCGGCAGAGCCGGCATCGCCACCCGATGACGGCGGCGCGTCGATACTCGGCTGCTCCACCACCGCTGACCGCGGTGCCTCCTGCTGTAAATCCGTCGCTCTCACCTTTACTTTAGTGTTGTTGGTGAGACATTTCTATGAAGTGGTTGCTGTTGGCACTGCAGAGTATCCATTTACACTTGCCACTGTGCTTATTTTAAGAGCAAGTGGAATTATTTTTCCTATGTACGTGATAATTCGAATGATCACTGCCATTCAAAACAGTGTTCGTCAAAATCGGTATCAGTATCAATATCGGAATCATGAGGATTCTGATGATGATGATGATATTTCAAGCTTTGAAGATGATGATAGAAGGCTGCATCATATTGTCTAA

Protein sequence

MSHAVGFATKKNSKAPSNLKPPVLVQFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKPQHADPGVTIRDSVEIPRSEDEEAAEPASPPDDGGASILGCSTTADRGASCCKSVALTFTLVLLVRHFYEVVAVGTAEYPFTLATVLILRASGIIFPMYVIIRMITAIQNSVRQNRYQYQYRNHEDSDDDDDISSFEDDDRRLHHIV

Homology

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BLAST of HG10019327 vs. NCBI nr
Match: XP_031739593.1 (uncharacterized protein LOC101220948 isoform X2 [Cucumis sativus])

HSP 1 Score: 365.5 bits (937), Expect = 3.0e-97
Identity = 188/208 (90.38%), Postives = 195/208 (93.75%), Query Frame = 0


Query: 4   AVGFATKKNSKAPSNLKPPVLVQFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKP 63
           AVGFATKKNSKA SNLKPPVLVQFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKP
Sbjct: 15  AVGFATKKNSKALSNLKPPVLVQFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKP 74

Query: 64  QHAD-PGVTIRDSVEIPRSEDEEAAEPASPPDDGGASILGCSTTADRGASCCKSVALTFT 123
            HAD P VT+RD VEIPRSEDEE AEPAS PDD  AS+  CSTTADRGASCCKSVALTFT
Sbjct: 75  HHADPPSVTLRDGVEIPRSEDEETAEPASSPDDDSASVSACSTTADRGASCCKSVALTFT 134

Query: 124 LVLLVRHFYEVVAVGTAEYPFTLATVLILRASGIIFPMYVIIRMITAIQNSVRQNRYQYQ 183
           LVLLVRHFY+VVAVGTA+YPFTLATVLILRASGIIFPMYVIIR +TAIQNSVR+NRYQY+
Sbjct: 135 LVLLVRHFYDVVAVGTADYPFTLATVLILRASGIIFPMYVIIRTVTAIQNSVRRNRYQYR 194

Query: 184 YRNHEDS-DDDDDISSFEDDDRRLHHIV 210
           YRNHEDS DDDDDISSFEDDDRRLHHIV
Sbjct: 195 YRNHEDSDDDDDDISSFEDDDRRLHHIV 222

[Close]

BLAST of HG10019327 vs. NCBI nr
Match: XP_038903313.1 (uncharacterized protein LOC120089938 isoform X2 [Benincasa hispida])

HSP 1 Score: 357.1 bits (915), Expect = 1.1e-94
Identity = 186/209 (89.00%), Postives = 191/209 (91.39%), Query Frame = 0


Query: 1   MSHAVGFATKKNSKAPSNLKPPVLVQFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPS 60
           M HAVGFATKKNSKA  N KPPVLVQFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPS
Sbjct: 12  MFHAVGFATKKNSKALFNSKPPVLVQFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPS 71

Query: 61  KKPQHADPGVTIRDSVEIPRSEDEEAAEPASPPDDGGASILGCSTTADRGASCCKSVALT 120
           KKPQHADPGVTIR+SVEIPRSEDEE AE   PPDDGGA    CSTTADRGASCCKSVALT
Sbjct: 72  KKPQHADPGVTIRNSVEIPRSEDEETAE---PPDDGGALDTACSTTADRGASCCKSVALT 131

Query: 121 FTLVLLVRHFYEVVAVGTAEYPFTLATVLILRASGIIFPMYVIIRMITAIQNSVRQNRYQ 180
           FTLVLLVRHFY+VVAVGTAEYPFT+ATVL LRASGIIFPMYVIIRMIT IQNSV +NRYQ
Sbjct: 132 FTLVLLVRHFYDVVAVGTAEYPFTVATVLFLRASGIIFPMYVIIRMITTIQNSVYRNRYQ 191

Query: 181 YQYRNHEDSDDDDDISSFEDDDRRLHHIV 210
           YQ  NHEDSDD +DISSFEDDDRRLHHIV
Sbjct: 192 YQ--NHEDSDDGEDISSFEDDDRRLHHIV 215

[Close]

BLAST of HG10019327 vs. NCBI nr
Match: KAA0044412.1 (E3 ubiquitin-protein ligase MARCH8 isoform X1 [Cucumis melo var. makuwa] >TYK29539.1 E3 ubiquitin-protein ligase MARCH8 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 328.9 bits (842), Expect = 3.1e-86
Identity = 168/186 (90.32%), Postives = 172/186 (92.47%), Query Frame = 0


Query: 4   AVGFATKKNSKAPSNLKPPVLVQFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKP 63
           AVGFATKKNSKA SN KPPVLVQFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKP
Sbjct: 15  AVGFATKKNSKALSNSKPPVLVQFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKP 74

Query: 64  QHADPGVTIRDSVEIPRSEDEEAAEPASPPDDGGASILGCSTTADRGASCCKSVALTFTL 123
            H D GVTIRD VEIPRSEDEEAAEPASP D  GAS+  CSTTA+RGASCCKSVALTFTL
Sbjct: 75  HHTDQGVTIRDGVEIPRSEDEEAAEPASPRDGDGASLSACSTTANRGASCCKSVALTFTL 134

Query: 124 VLLVRHFYEVVAVGTAEYPFTLATVLILRASGIIFPMYVIIRMITAIQNSVRQNRYQYQY 183
           VLLVRHFY+VVAVGT EYPFTLATVLILRASGIIFPMYVIIR ITAIQNSVR+NRYQYQY
Sbjct: 135 VLLVRHFYDVVAVGTDEYPFTLATVLILRASGIIFPMYVIIRTITAIQNSVRRNRYQYQY 194

Query: 184 RNHEDS 190
           RNHE S
Sbjct: 195 RNHEVS 200

[Close]

BLAST of HG10019327 vs. NCBI nr
Match: XP_011652953.1 (uncharacterized protein LOC101220948 isoform X1 [Cucumis sativus] >KGN52850.1 hypothetical protein Csa_015207 [Cucumis sativus])

HSP 1 Score: 327.4 bits (838), Expect = 9.0e-86
Identity = 169/202 (83.66%), Postives = 181/202 (89.60%), Query Frame = 0


Query: 14  KAPSNLKPPV----LVQFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKPQHAD-P 73
           ++P  L+ P      ++FAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKP HAD P
Sbjct: 31  ESPLQLEAPCSCSGTIKFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKPHHADPP 90

Query: 74  GVTIRDSVEIPRSEDEEAAEPASPPDDGGASILGCSTTADRGASCCKSVALTFTLVLLVR 133
            VT+RD VEIPRSEDEE AEPAS PDD  AS+  CSTTADRGASCCKSVALTFTLVLLVR
Sbjct: 91  SVTLRDGVEIPRSEDEETAEPASSPDDDSASVSACSTTADRGASCCKSVALTFTLVLLVR 150

Query: 134 HFYEVVAVGTAEYPFTLATVLILRASGIIFPMYVIIRMITAIQNSVRQNRYQYQYRNHED 193
           HFY+VVAVGTA+YPFTLATVLILRASGIIFPMYVIIR +TAIQNSVR+NRYQY+YRNHED
Sbjct: 151 HFYDVVAVGTADYPFTLATVLILRASGIIFPMYVIIRTVTAIQNSVRRNRYQYRYRNHED 210

Query: 194 S-DDDDDISSFEDDDRRLHHIV 210
           S DDDDDISSFEDDDRRLHHIV
Sbjct: 211 SDDDDDDISSFEDDDRRLHHIV 232

[Close]

BLAST of HG10019327 vs. NCBI nr
Match: XP_016901466.1 (PREDICTED: uncharacterized protein LOC103494737 [Cucumis melo])

HSP 1 Score: 326.2 bits (835), Expect = 2.0e-85
Identity = 170/204 (83.33%), Postives = 179/204 (87.75%), Query Frame = 0


Query: 14  KAPSNLKPPV----LVQFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKPQHADPG 73
           ++P  L+ P      ++FAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKP H D G
Sbjct: 31  ESPLQLEAPCSCSGTIKFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKPHHTDQG 90

Query: 74  VTIRDSVEIPRSEDEEAAEPASPPDDGGASILGCSTTADRGASCCKSVALTFTLVLLVRH 133
           VTIRD VEIPRSEDEEAAEPASP D  GAS+  CSTTA+RGASCCKSVALTFTLVLLVRH
Sbjct: 91  VTIRDGVEIPRSEDEEAAEPASPRDGDGASLSACSTTANRGASCCKSVALTFTLVLLVRH 150

Query: 134 FYEVVAVGTAEYPFTLATVLILRASGIIFPMYVIIRMITAIQNSVRQNRYQYQYRNHEDS 193
           FY+VVAVGT EYPFTLATVLILRASGIIFPMYVIIR ITAIQNSVR+NRYQYQYRNHED 
Sbjct: 151 FYDVVAVGTDEYPFTLATVLILRASGIIFPMYVIIRTITAIQNSVRRNRYQYQYRNHEDF 210

Query: 194 DDD----DDISSFEDDDRRLHHIV 210
           DDD    DDISSFEDDDRRLHHIV
Sbjct: 211 DDDDDEEDDISSFEDDDRRLHHIV 234

[Close]

BLAST of HG10019327 vs. ExPASy TrEMBL
Match: A0A5A7TM87 (E3 ubiquitin-protein ligase MARCH8 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001420 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.5e-86
Identity = 168/186 (90.32%), Postives = 172/186 (92.47%), Query Frame = 0


Query: 4   AVGFATKKNSKAPSNLKPPVLVQFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKP 63
           AVGFATKKNSKA SN KPPVLVQFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKP
Sbjct: 15  AVGFATKKNSKALSNSKPPVLVQFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKP 74

Query: 64  QHADPGVTIRDSVEIPRSEDEEAAEPASPPDDGGASILGCSTTADRGASCCKSVALTFTL 123
            H D GVTIRD VEIPRSEDEEAAEPASP D  GAS+  CSTTA+RGASCCKSVALTFTL
Sbjct: 75  HHTDQGVTIRDGVEIPRSEDEEAAEPASPRDGDGASLSACSTTANRGASCCKSVALTFTL 134

Query: 124 VLLVRHFYEVVAVGTAEYPFTLATVLILRASGIIFPMYVIIRMITAIQNSVRQNRYQYQY 183
           VLLVRHFY+VVAVGT EYPFTLATVLILRASGIIFPMYVIIR ITAIQNSVR+NRYQYQY
Sbjct: 135 VLLVRHFYDVVAVGTDEYPFTLATVLILRASGIIFPMYVIIRTITAIQNSVRRNRYQYQY 194

Query: 184 RNHEDS 190
           RNHE S
Sbjct: 195 RNHEVS 200

[Close]

BLAST of HG10019327 vs. ExPASy TrEMBL
Match: A0A0A0KT99 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G003640 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 4.3e-86
Identity = 169/202 (83.66%), Postives = 181/202 (89.60%), Query Frame = 0


Query: 14  KAPSNLKPPV----LVQFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKPQHAD-P 73
           ++P  L+ P      ++FAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKP HAD P
Sbjct: 31  ESPLQLEAPCSCSGTIKFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKPHHADPP 90

Query: 74  GVTIRDSVEIPRSEDEEAAEPASPPDDGGASILGCSTTADRGASCCKSVALTFTLVLLVR 133
            VT+RD VEIPRSEDEE AEPAS PDD  AS+  CSTTADRGASCCKSVALTFTLVLLVR
Sbjct: 91  SVTLRDGVEIPRSEDEETAEPASSPDDDSASVSACSTTADRGASCCKSVALTFTLVLLVR 150

Query: 134 HFYEVVAVGTAEYPFTLATVLILRASGIIFPMYVIIRMITAIQNSVRQNRYQYQYRNHED 193
           HFY+VVAVGTA+YPFTLATVLILRASGIIFPMYVIIR +TAIQNSVR+NRYQY+YRNHED
Sbjct: 151 HFYDVVAVGTADYPFTLATVLILRASGIIFPMYVIIRTVTAIQNSVRRNRYQYRYRNHED 210

Query: 194 S-DDDDDISSFEDDDRRLHHIV 210
           S DDDDDISSFEDDDRRLHHIV
Sbjct: 211 SDDDDDDISSFEDDDRRLHHIV 232

[Close]

BLAST of HG10019327 vs. ExPASy TrEMBL
Match: A0A1S4DZR9 (uncharacterized protein LOC103494737 OS=Cucumis melo OX=3656 GN=LOC103494737 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 9.7e-86
Identity = 170/204 (83.33%), Postives = 179/204 (87.75%), Query Frame = 0


Query: 14  KAPSNLKPPV----LVQFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKPQHADPG 73
           ++P  L+ P      ++FAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKP H D G
Sbjct: 31  ESPLQLEAPCSCSGTIKFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKPHHTDQG 90

Query: 74  VTIRDSVEIPRSEDEEAAEPASPPDDGGASILGCSTTADRGASCCKSVALTFTLVLLVRH 133
           VTIRD VEIPRSEDEEAAEPASP D  GAS+  CSTTA+RGASCCKSVALTFTLVLLVRH
Sbjct: 91  VTIRDGVEIPRSEDEEAAEPASPRDGDGASLSACSTTANRGASCCKSVALTFTLVLLVRH 150

Query: 134 FYEVVAVGTAEYPFTLATVLILRASGIIFPMYVIIRMITAIQNSVRQNRYQYQYRNHEDS 193
           FY+VVAVGT EYPFTLATVLILRASGIIFPMYVIIR ITAIQNSVR+NRYQYQYRNHED 
Sbjct: 151 FYDVVAVGTDEYPFTLATVLILRASGIIFPMYVIIRTITAIQNSVRRNRYQYQYRNHEDF 210

Query: 194 DDD----DDISSFEDDDRRLHHIV 210
           DDD    DDISSFEDDDRRLHHIV
Sbjct: 211 DDDDDEEDDISSFEDDDRRLHHIV 234

[Close]

BLAST of HG10019327 vs. ExPASy TrEMBL
Match: A0A6J1J7P0 (uncharacterized protein LOC111482490 OS=Cucurbita maxima OX=3661 GN=LOC111482490 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.8e-79
Identity = 158/209 (75.60%), Postives = 175/209 (83.73%), Query Frame = 0


Query: 3   HAVGFATKKNSKAPSNLKPPVLVQFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKK 62
           H   F T    +AP +      ++FAHRDCIQRWC+EKGSTVCEICLQNYEPGYT+PSKK
Sbjct: 26  HEDEFETALQLEAPCSCSG--TIKFAHRDCIQRWCTEKGSTVCEICLQNYEPGYTSPSKK 85

Query: 63  PQHADPGVTIRDSVEIPRSEDEEAAEPASPPDDGGASILGCSTTADRGASCCKSVALTFT 122
           PQ  DPGVTIRDS++IPRSE+EEAAEP SPP DGGAS   CSTTADRGASCCKSVALTFT
Sbjct: 86  PQRGDPGVTIRDSLQIPRSEEEEAAEPTSPPADGGASDSTCSTTADRGASCCKSVALTFT 145

Query: 123 LVLLVRHFYEVVAVGTAEYPFTLATVLILRASGIIFPMYVIIRMITAIQNSVRQNRYQYQ 182
           L+LLVRHFYEV+ + TA+YPFTLATVLILRASGIIFPMYVIIR ITAIQNS R+NRYQY+
Sbjct: 146 LMLLVRHFYEVITIDTAQYPFTLATVLILRASGIIFPMYVIIRTITAIQNSARRNRYQYE 205

Query: 183 YRNHE--DSDDDDDISSFEDDDRRLHHIV 210
             + E  D D DDDISSFE+DDRR HHIV
Sbjct: 206 DEDEEESDGDSDDDISSFEEDDRRAHHIV 232

[Close]

BLAST of HG10019327 vs. ExPASy TrEMBL
Match: A0A6J1F9U4 (uncharacterized protein LOC111442137 OS=Cucurbita moschata OX=3662 GN=LOC111442137 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.3e-77
Identity = 150/186 (80.65%), Postives = 165/186 (88.71%), Query Frame = 0


Query: 25  VQFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKPQHADPGVTIRDSVEIPRSEDE 84
           ++FAHRDCIQRWC+EKGSTVCEICLQNYEPGYT+PSKKPQ  DPGVTIRDS++IPR+E+E
Sbjct: 46  IKFAHRDCIQRWCTEKGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPRNEEE 105

Query: 85  EAAEPASPPDDGGASILGCSTTADRGASCCKSVALTFTLVLLVRHFYEVVAVGTAEYPFT 144
           EAAEPASPP DGGAS   CSTT DRGASCCKSVALTFTL+LL RHFYEVV + TA+YPFT
Sbjct: 106 EAAEPASPPADGGASDSTCSTTTDRGASCCKSVALTFTLMLLARHFYEVVTIDTAQYPFT 165

Query: 145 LATVLILRASGIIFPMYVIIRMITAIQNSVRQNRYQYQYRNHEDSD-DDDDISSFEDDDR 204
           LATVLILRASGIIFPMYVIIR I+ IQNS RQNRY+YQ     D D DDDDIS FE+DDR
Sbjct: 166 LATVLILRASGIIFPMYVIIRTISVIQNSARQNRYRYQNEEESDVDSDDDDISRFEEDDR 225

Query: 205 RLHHIV 210
           R+HHIV
Sbjct: 226 RVHHIV 231

[Close]

BLAST of HG10019327 vs. TAIR 10
Match: AT1G02610.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 150.6 bits (379), Expect = 1.4e-36
Identity = 81/182 (44.51%), Postives = 118/182 (64.84%), Query Frame = 0


Query: 25  VQFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKPQHADPGVTIRDSVEIPRSEDE 84
           ++FAHRDCIQRWC EKG+T+CEICLQ Y+PGYT  SK  +  +  VTIRD++ I R E+ 
Sbjct: 42  IKFAHRDCIQRWCDEKGNTICEICLQEYKPGYTTTSKPSRFIETAVTIRDNLHIMRRENG 101

Query: 85  EAAEPASPPDDGGASILGCSTTADRGASCCKSVALTFTLVLLVRHFYEVVAVGTAEYPFT 144
                    +   +    C++  DRGASCC+ +AL F+++LL++H ++ V  GT EYP+T
Sbjct: 102 RRRRNRRLVNREESDFQECNSGVDRGASCCRYLALIFSVILLIKHAFDAV-YGTEEYPYT 161

Query: 145 LATVLILRASGIIFPMYVIIRMITAIQNSVRQNRYQYQYRNHEDSDDDDDISSFEDDDRR 204
           + TVL L+A GI+ PM VIIR ITAIQ S+   RYQ      +    +++    E+++++
Sbjct: 162 IFTVLTLKAIGILLPMLVIIRTITAIQRSL---RYQILESEEDTLSSEEEDHGLEEEEQQ 219

Query: 205 LH 207
            H
Sbjct: 222 QH 219

[Close]

BLAST of HG10019327 vs. TAIR 10
Match: AT4G02075.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 139.0 bits (349), Expect = 4.2e-33
Identity = 84/185 (45.41%), Postives = 121/185 (65.41%), Query Frame = 0


Query: 25  VQFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKPQHADPGVTIRDSVEIPRSEDE 84
           V+FAHR+CIQRWC+EKG+T CEICLQ Y+ GYTA  K+ +  +  VTIR +    R    
Sbjct: 42  VKFAHRNCIQRWCNEKGNTTCEICLQVYKDGYTAVLKQSKLIEQEVTIRVNGRRRRRSRR 101

Query: 85  EAAEPASPPDDGGASILGCSTTADRGASCCKSVALTFTLVLLVRHFYEVVAVGTAEYPFT 144
             +   S        I  C++ ADRGAS C+S+  T ++ LL++H ++V+  GT EYPF+
Sbjct: 102 LVSIAES-------DISQCNSVADRGASFCRSLTFTLSVFLLMKHTFDVI-YGTEEYPFS 161

Query: 145 LATVLILRASGIIFPMYVIIRMITAIQNSVRQNRYQYQYRNHED---SDDDDDISSFEDD 204
           + TVL L+A GI+ PM++IIR I+ IQ ++R+ R+QY     ED   SDDDDD+   ED+
Sbjct: 162 VFTVLTLKAIGILLPMFIIIRTISTIQKTLRR-RHQYPESEEEDRLSSDDDDDLEE-EDE 216

Query: 205 DRRLH 207
           +++ H
Sbjct: 222 EQQQH 216

[Close]

BLAST of HG10019327 vs. TAIR 10
Match: AT2G01275.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 82.4 bits (202), Expect = 4.7e-16
Identity = 61/193 (31.61%), Postives = 91/193 (47.15%), Query Frame = 0


Query: 17  SNLKPPV----LVQFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKPQHADPGVTI 76
           SN++ P      V++AHR C+QRWC+EKG T CEIC Q ++P YTAP    +     +  
Sbjct: 69  SNMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYTAPPPLLELGHVPLHF 128

Query: 77  RDSVEIPRSEDEEAAEPASPPDDGGASILGCSTTADRGASCCKSVALTFTLVLLVRHFYE 136
           R +  I + E          P D          ++     CC+S+ L F  +L++RH   
Sbjct: 129 RGNWGISQREHRFI---TVVPADSTFIDQPYPLSSTTSFICCRSLVLIFMALLILRHTLP 188

Query: 137 VVAVGTAEYPFTLATVLILRASGIIFPMYVIIRMITAIQNSVRQNRYQYQYRNHEDSDDD 196
           +V  G+  + F L T+L LR  GI+ P+YV+ + +   +   R            D+   
Sbjct: 189 LVLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVATCRRHSRT----------LDTSPS 248

Query: 197 DDISSFEDDDRRL 206
           DD S  E D  RL
Sbjct: 249 DDSSDEETDSWRL 248

[Close]

BLAST of HG10019327 vs. TAIR 10
Match: AT2G01275.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 82.4 bits (202), Expect = 4.7e-16
Identity = 61/193 (31.61%), Postives = 91/193 (47.15%), Query Frame = 0


Query: 17  SNLKPPV----LVQFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKPQHADPGVTI 76
           SN++ P      V++AHR C+QRWC+EKG T CEIC Q ++P YTAP    +     +  
Sbjct: 69  SNMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYTAPPPLLELGHVPLHF 128

Query: 77  RDSVEIPRSEDEEAAEPASPPDDGGASILGCSTTADRGASCCKSVALTFTLVLLVRHFYE 136
           R +  I + E          P D          ++     CC+S+ L F  +L++RH   
Sbjct: 129 RGNWGISQREHRFI---TVVPADSTFIDQPYPLSSTTSFICCRSLVLIFMALLILRHTLP 188

Query: 137 VVAVGTAEYPFTLATVLILRASGIIFPMYVIIRMITAIQNSVRQNRYQYQYRNHEDSDDD 196
           +V  G+  + F L T+L LR  GI+ P+YV+ + +   +   R            D+   
Sbjct: 189 LVLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVATCRRHSRT----------LDTSPS 248

Query: 197 DDISSFEDDDRRL 206
           DD S  E D  RL
Sbjct: 249 DDSSDEETDSWRL 248

[Close]

BLAST of HG10019327 vs. TAIR 10
Match: AT5G38070.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 1.0e-15
Identity = 54/159 (33.96%), Postives = 77/159 (48.43%), Query Frame = 0


Query: 25  VQFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKPQHADPGVTIRDSVEIPRSEDE 84
           ++FAH +C+QRWC+EKG TVCEIC Q Y+PGYTAP +   +    +       I   E  
Sbjct: 76  LKFAHHNCVQRWCNEKGDTVCEICRQQYKPGYTAPRQLFHYTGISMNFGSDWGI---EGL 135

Query: 85  EAAEP-----ASPPDDGGASILGCSTTADRGASCCKSVALTFTLVLLVRHFYEVVAVGTA 144
           +   P         DD         T+      CC+ +AL F L+L +RH   V+  G  
Sbjct: 136 DLRNPYFLTWGDADDDHDLYSFHSPTS----LICCRLIALLFVLLLFLRHSLPVLLGGVD 195

Query: 145 EYPFTLATVLILRASGIIFPMYVIIRMITAIQNSVRQNR 179
           ++  TL  + ++R  GI+   YV  +    IQ   RQ R
Sbjct: 196 DFSITLLMLPLVRTLGILLIAYVFFKSFIVIQR-CRQER 226

The following BLAST results are available for this feature:

BLAST of HG10019327 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031739593.1	3.0e-97	90.38	uncharacterized protein LOC101220948 isoform X2 [Cucumis sativus]	[more]
XP_038903313.1	1.1e-94	89.00	uncharacterized protein LOC120089938 isoform X2 [Benincasa hispida]	[more]
KAA0044412.1	3.1e-86	90.32	E3 ubiquitin-protein ligase MARCH8 isoform X1 [Cucumis melo var. makuwa] >TYK295...	[more]
XP_011652953.1	9.0e-86	83.66	uncharacterized protein LOC101220948 isoform X1 [Cucumis sativus] >KGN52850.1 hy...	[more]
XP_016901466.1	2.0e-85	83.33	PREDICTED: uncharacterized protein LOC103494737 [Cucumis melo]	[more]

BLAST of HG10019327 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10019327 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TM87	1.5e-86	90.32	E3 ubiquitin-protein ligase MARCH8 isoform X1 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A0A0KT99	4.3e-86	83.66	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G00364...	[more]
A0A1S4DZR9	9.7e-86	83.33	uncharacterized protein LOC103494737 OS=Cucumis melo OX=3656 GN=LOC103494737 PE=...	[more]
A0A6J1J7P0	1.8e-79	75.60	uncharacterized protein LOC111482490 OS=Cucurbita maxima OX=3661 GN=LOC111482490...	[more]
A0A6J1F9U4	1.3e-77	80.65	uncharacterized protein LOC111442137 OS=Cucurbita moschata OX=3662 GN=LOC1114421...	[more]

BLAST of HG10019327 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02610.1	1.4e-36	44.51	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT4G02075.1	4.2e-33	45.41	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G01275.1	4.7e-16	31.61	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G01275.2	4.7e-16	31.61	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G38070.1	1.0e-15	33.96	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 12..49 e-value: 0.0061 score: 9.0
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 22..54 e-value: 1.8E-8 score: 36.1
IPR022143	Protein of unknown function DUF3675	PFAM	PF12428	DUF3675	coord: 54..167 e-value: 1.2E-28 score: 100.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..101
None	No IPR available	PANTHER	PTHR23012:SF180	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	coord: 25..180
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 26..53
IPR033275	E3 ubiquitin-protein ligase MARCH-like	PANTHER	PTHR23012	RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING	coord: 25..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10019327.1	HG10019327.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding