HG10019166 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10019166
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr04: 18069129 .. 18072310 (+)
RNA-Seq ExpressionHG10019166
SyntenyHG10019166
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAGATCTAGTCGTCGCCTCCCTCCCTCCGACCACCCTGCCACCGTCGACAACGCGCCTGCCAAGATCCAACCGCCGCCTCCCTCCTTTTTGGCCACTGCACGAATCGCTGTCGCCTTTCTCATATCTCGCCGTCATGGATTTTTTTTCATTTTGCCACTGTGGGTTTCTTCCATAGATCTCGATCTCACCGTTGTGGTTTGGTTAGTTTAGTATGGCTACTTTGGTTCGGCTGGTGATATATGTACTTCTTCTTTGATTTTACGATATGTATATATATATATTTGTTTGTATATTTAGATTTTCTGTTTTATGATATATACACTTATATATATTGAACATTGAGTTCATCTGTGATTTATATACCGTGTATATAGCTTTGTTTATTTGAAAATTATGAGGTTTGAAAATGAATTTGAAGTAATTGGGAATTAACAATTTCTGTTATGAAGTTTTTGTTAAATTTTGATTTGTTGGGATTTCTAGCTACTTAAATAGAATTTATGATGTATATTGTCATATAAATGAAATTTATAATATATACGGTGATTCATGTTGAACGTGTGTAGTCAATCTTACCAGTATATTTCATATATTGGTTAGAATATTTGCAAACATGTTATACAATGTTCCAAGGTATATTGACAAAACATTGAAGAATATATTACAGGCACAAGTGATATCTAATTAGAAATGCATACATATCAGAATACATGGAATATATCTACCAAATAAACAATTGAATATATTACATGAAAATATATAATACTCAAAACAAACAATGAAATATATTATAGAATATAAAAAATCAAACATGAAAAACGAAGAAGACGCTGGAAACCAACAAGTTGCCATGAAATGACATTTTCTCTCTCCAATTGAAAATGGAAAAAATTATATTAAATGCATTTTCTCTCTCAAATTAAAAATGGAAAAAAAACTCATATTAAATACATTTTCTCTCACCATAATAAATCTATTTTTTCTCTTCATCATTAAGGGAGCTTCGTGAATAAGAAAATATATATAAAAAAAAGGATATAAATAAATGAAAAAATGATAAAATTGTCCAAAATTAACACTAAAAGCCTTCTGTGAAAAAAAAAATCAAATTTAAAGACATTTATGAAATATATGGCCCAAAGATGATTTTCATGTAAAAATCTCAAAATTTTATTGGTTAAAATTGGAGGTGAATTTATCAAATAAGAAAAAAAAAAGAAAAAAAAAAAAGAGGCGGTGGATTCATCTATAAAAAGAACAAAATTAGATGAAAAAAAATAAGAAGTGAGTTGTGAGCCTTGTATTTCTAAAAAAGAAGAAAAAGTCAGAGAGGAATTTAAAGCGAACCAGTATATTTTTCGATGTCGTTCTCTTTTTTCCTTCACTTTATTATTTGATAATTTATGATCAATTACTTGTTTGGCTCTAACCTGTGAAGTGAGAATTTGAGAAATATTTTAATATATTCCACATTTATTTATATCTCATATAAATTCCCAATAATAGTATATTCTAGGAACAACTCGGTCAAAATCTAAATAACCTTTTCTCTCACTCTTTGTGCAAAGGTACCAACCATGGTCAGAGGTCTTCATACACAAGAATATGTGATGGGGCCAAATCTTACACATGTGCGTATATCATTCCTAATCAAATTAAAATATATGAATTATCCTCATATTAATTGTAGACCGCAACAATGTCTCCAATATGGTAAATTTCACCACCACCAAATCTACTCATTCTCCTCCACAACTTCTCATGCCAACTACTCTGTCACAACTTTTCCATACAAATATTAATTCTTCAAATCCCCAATTCATCCATAATAATAATAATAAACATTACAACACTTAAATCTATTTGAAGTTTTTTTTTTTAAGTTGTCACAATTTGAAGAATGTAATCCATGTATCGTCTCTGTGGGTCACACCAACATTGGGAATCCTCGATTTGACCAAGGATAAGGCTCAAACTGAGGATTTAAATAGGGTCCCTGGTCGGGGACGAGGTGGGGACCCTAAACCTGCCTCATTTAATTTTTAATATATTTTTAAAAGAATAATATTGGATACACTCATATTTATGCATCTCATCACTCACACCAAAAAAAATTAAAATATTTCTTAAAAATAAAAAGAATTTGTCATATGTCATATTTGGTGGGATGCACAAAGATAGGTGATGTCTGAGATGCACATTACCTTTTGGTCATAAATCAATTAATTTAAAAAATGGTCATTATTCTAACTAGAGGTCCCGTTTTGACCATCACGTGCAATTTTCCTATTAATTTGTCAGACTTCTAACTGGTTAACTGATAGGCCACTTGTCAAGTTTGTCATAGGGTTGACCAGATAAATAGCAAATTTAGAGGTTTGATTTGAAAAAATAGCAAATTATTTTCGAAATTGTTAAAATAGCAAACATAATTAAATCATGAAAAATAATGATTAACAATTGTCAAGATTGTGCTCAATTAACCCATATTAATAATGTTTCCAATTGGGAAGTTAGAAAGTTTCAAAAGCATTCCAAAAACCACAAATATACTCTAATGAAACAAATCTCACACTACCCAATGCATTGACGTATGTCAAATCAGCACACTAACCAATCGATGACTTCAAATAAAATAATTAAAATTTAAAACAAGGATTTCAAATAAAAACAAAATAGAGTTTTACCCTTTAGAAAAGTTGAAAGAGGGATTGTGTCGTTCAGCTTCTTCTTCTCTCCAAGCTGCCATCCAGCTTCTTCTTCTCTCTATGTCACGTTCAGCTTCAGCTCGTGTTGCCGTCCAACGCCACCGTTCACGTTCACTCTCCAAGCTGTCGTTCGCTTTGACCCGGCACTGACCCACGTTGCTTGCCGTCAAGCATCGTCGATGTGTAGTCTGCTTGGGTAGTCCATCCATTTGGGTTTCATTTGCTGCCAATCGTCACCGTTGTTGGGTTCTATTCAGCATTGTGTTGTTGGTTCTGGCTTGGTGTTGTTGTGAGTTCGATTCGGCGTGGGTTCCGTCCGGCGTGAGTTCCATTCGGCATGGTGTTGCTATGGTGTTTTTGGGTGTCGTCTGGCATGGGTTTCGTCCGGCGTACTGTGGGTTCGATTCAGGTGAGGGTTTTATTCCATTCGACGGCTGGTTTCGTCCAAGTGTGATGTTCCGACGTTAA

mRNA sequence

ATGCAAAGATCTAGTCGTCGCCTCCCTCCCTCCGACCACCCTGCCACCGTCGACAACGCGCCTGCCAAGATCCAACCGCCGCCTCCCTCCTTTTTGGCCACTGCACGAATCGCTGTCGCCTTTCTCATATCTCGCCGTCATGGATTTTTTTTCATTTTGCCACTGTGGGTTTCTTCCATAGATCTCGATCTCACCGTTGTGGTTTGTCCATCCATTTGGGTTTCATTTGCTGCCAATCGTCACCGTTGTTGGGTTCTATTCAGCATTGTGTTGTTGGTTCTGGCTTGGTGTTGTTGTGAGTTCGATTCGGCGTGGGTTCCGTCCGGCGTGAGTTCCATTCGGCATGGTGTTGCTATGGTGTTTTTGGGTGTCGTCTGGCATGGGTTTCGTCCGGCGTACTGTGGGTTCGATTCAGGTGAGGGTTTTATTCCATTCGACGGCTGGTTTCGTCCAAGTGTGATGTTCCGACGTTAA

Coding sequence (CDS)

ATGCAAAGATCTAGTCGTCGCCTCCCTCCCTCCGACCACCCTGCCACCGTCGACAACGCGCCTGCCAAGATCCAACCGCCGCCTCCCTCCTTTTTGGCCACTGCACGAATCGCTGTCGCCTTTCTCATATCTCGCCGTCATGGATTTTTTTTCATTTTGCCACTGTGGGTTTCTTCCATAGATCTCGATCTCACCGTTGTGGTTTGTCCATCCATTTGGGTTTCATTTGCTGCCAATCGTCACCGTTGTTGGGTTCTATTCAGCATTGTGTTGTTGGTTCTGGCTTGGTGTTGTTGTGAGTTCGATTCGGCGTGGGTTCCGTCCGGCGTGAGTTCCATTCGGCATGGTGTTGCTATGGTGTTTTTGGGTGTCGTCTGGCATGGGTTTCGTCCGGCGTACTGTGGGTTCGATTCAGGTGAGGGTTTTATTCCATTCGACGGCTGGTTTCGTCCAAGTGTGATGTTCCGACGTTAA

Protein sequence

MQRSSRRLPPSDHPATVDNAPAKIQPPPPSFLATARIAVAFLISRRHGFFFILPLWVSSIDLDLTVVVCPSIWVSFAANRHRCWVLFSIVLLVLAWCCCEFDSAWVPSGVSSIRHGVAMVFLGVVWHGFRPAYCGFDSGEGFIPFDGWFRPSVMFRR
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10019166.1HG10019166.1mRNA