HG10019027 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10019027
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	F-box protein At1g10780
Location	Chr04: 14446475 .. 14448222 (+)
RNA-Seq Expression	HG10019027
Synteny	HG10019027

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTCCCTCCCGGATGCTATTGTTCAATGCATCTTATCACATATGAGCAATGCTCGAGATGTGGCTGTCTGCAATTGCGTATCGAAGCGTTGGAAAGACTCGACGCCCTACATTAGAAGTCTCTATTTTCCTCGCAATTCCTTCGACAACCATTCGGGCGGGTTGAGTCCCGACATCATCATTTGGAGGATAATATCATCCATTGTTCACTTGGAGGAGCTTGTTGTTTATAGTCCATTTTCGGGTGCTGGTCTTGCTTCATGGTTGTCTAGTGTTGGCCCCACGCTTCGACACCTCGAGTTACGAATGGATAATCTGGTTGATCTTCAGGCTTGTCAAGAGAGCCCTTCCAAATTGGAATGCCTTAAATCTGCAGCAAATTTGGAGTCACTTCAATTATGGGGTGTGTTAATGACACATTCACCTAGATGGGATGTGTTTCAAAAGTTAAAAAACCTTGAGATTGTTGGTGCTAAGTTTGAGGATCCTGCATTGAACACTGCTCTTCGTGCATGTCCTAATCTTTCAAACTTATTGCTCCTTGGCTGTGAAGGTCTTACTTCAGTTTCAATTGAGCTGAAGCATTTGGAGCAGTGTAAGCTGGATTTCTTTGGCTTGGGGAACTGCTCACTTTTGATCAATGCTCCTAAAATTCAACTCCTTGAAGTTCACGGCTGTAGTTGGATTAGAGCCCGTGGGACAAGTTCCTTGAGAAATCTTTCAATTGCCAATACTCAAGGTAATCATCATAACTAGAAATCTTATGAAGGAAAGAAATACTTTTTCATAGTATACAAGTATGTGATCAAAATACTAAATAGAAGAACCTTAATTGTGATCTTTATGATATTAATCGTCTTGTTTATGATAAACAACCGTTTACAAAATACGACATGATTTAAGGGATATACTTGTTTTTTTGTATAGAAACTATTAATAGGAAGAGTCTACAAGGTGGAAGTTTGCTAACGTTCTACTTCAAAAAGAGTGCATCACTTAAAAGTCATTTGAACTTCATTTCCAAGACCTTAGCGATATTAATTGTCTTCTTTATCTTTAAAATTTGGAAAGTATGACATGATACAAGGGATAATAACTTTGTTTTTCTTTTTGGTTTTTTGTATGGAAACCTTTGATAGGAAGAGTCTACATGGTGGATTTTGATAAGCTTGTTTCGTTGGAGTCTCTGTCTTTAAGAGGTGTTCAATGGTGTTGGAATGCAATAAGCAAAATTCTTGAATGTGGGAGTGAGGTGAAACATCTTTACATGAAGGTTGAATTCACTGGAGACTTTGATGCACTTGAACCTTTCCCAGAAATTGACTTTGTTGAGTTTTTCAATAACCATCCAAAGTTGCAAAAGTTTGACATTCATGGAGCCATGTTTGCTGCACTTTGTCAAAAACACAGCCTTAAAAGTGTAAGTAGAATCAGTGCCAAATAAGACCAACTTGTTCTTGAGATGGATTGATTTCTTGGCTTATAAATTACATTCTTTTGTTACTCAGGTGGATCCAGATTTTGCCATCTCATGTTTGGAGGAAGTTTGGGTTACGGTTAGATCGCCGTTGAACGCGGAACAGAAGATGAATACTCTCGAATCGTTTATAAAGTATGCCAAGAATTTGAAGGCACTGGTAATAAATATTCTTCGGATGAAGAGTAGCCATAGCAGTGCAGATGATTTCTTTGATGACATTTGCAAGTTTAGATGTTGCAACCCCAAGACCGTTCGCATTGAATAA

mRNA sequence

ATGGACTCCCTCCCGGATGCTATTGTTCAATGCATCTTATCACATATGAGCAATGCTCGAGATGTGGCTGTCTGCAATTGCGTATCGAAGCGTTGGAAAGACTCGACGCCCTACATTAGAAGTCTCTATTTTCCTCGCAATTCCTTCGACAACCATTCGGGCGGGTTGAGTCCCGACATCATCATTTGGAGGATAATATCATCCATTGTTCACTTGGAGGAGCTTGTTGTTTATAGTCCATTTTCGGGTGCTGGTCTTGCTTCATGGTTGTCTAGTGTTGGCCCCACGCTTCGACACCTCGAGTTACGAATGGATAATCTGGTTGATCTTCAGGCTTGTCAAGAGAGCCCTTCCAAATTGGAATGCCTTAAATCTGCAGCAAATTTGGAGTCACTTCAATTATGGGGTGTGTTAATGACACATTCACCTAGATGGGATGTGTTTCAAAAGTTAAAAAACCTTGAGATTGTTGGTGCTAAGTTTGAGGATCCTGCATTGAACACTGCTCTTCGTGCATGTCCTAATCTTTCAAACTTATTGCTCCTTGGCTGTGAAGGTCTTACTTCAGTTTCAATTGAGCTGAAGCATTTGGAGCAGTGTAAGCTGGATTTCTTTGGCTTGGGGAACTGCTCACTTTTGATCAATGCTCCTAAAATTCAACTCCTTGAAGTTCACGGCTGTAGTTGGATTAGAGCCCGTGGGACAAGTTCCTTGAGAAATCTTTCAATTGCCAATACTCAAGGAAGAGTCTACATGGTGGATTTTGATAAGCTTGTTTCGTTGGAGTCTCTGTCTTTAAGAGGTGTTCAATGGTGTTGGAATGCAATAAGCAAAATTCTTGAATGTGGGAGTGAGGTGAAACATCTTTACATGAAGGTTGAATTCACTGGAGACTTTGATGCACTTGAACCTTTCCCAGAAATTGACTTTGTTGAGTTTTTCAATAACCATCCAAAGTTGCAAAAGTTTGACATTCATGGAGCCATGTTTGCTGCACTTTGTCAAAAACACAGCCTTAAAAGTGTGGATCCAGATTTTGCCATCTCATGTTTGGAGGAAGTTTGGGTTACGGTTAGATCGCCGTTGAACGCGGAACAGAAGATGAATACTCTCGAATCGTTTATAAAGTATGCCAAGAATTTGAAGGCACTGGTAATAAATATTCTTCGGATGAAGAGTAGCCATAGCAGTGCAGATGATTTCTTTGATGACATTTGCAAGTTTAGATGTTGCAACCCCAAGACCGTTCGCATTGAATAA

Coding sequence (CDS)

ATGGACTCCCTCCCGGATGCTATTGTTCAATGCATCTTATCACATATGAGCAATGCTCGAGATGTGGCTGTCTGCAATTGCGTATCGAAGCGTTGGAAAGACTCGACGCCCTACATTAGAAGTCTCTATTTTCCTCGCAATTCCTTCGACAACCATTCGGGCGGGTTGAGTCCCGACATCATCATTTGGAGGATAATATCATCCATTGTTCACTTGGAGGAGCTTGTTGTTTATAGTCCATTTTCGGGTGCTGGTCTTGCTTCATGGTTGTCTAGTGTTGGCCCCACGCTTCGACACCTCGAGTTACGAATGGATAATCTGGTTGATCTTCAGGCTTGTCAAGAGAGCCCTTCCAAATTGGAATGCCTTAAATCTGCAGCAAATTTGGAGTCACTTCAATTATGGGGTGTGTTAATGACACATTCACCTAGATGGGATGTGTTTCAAAAGTTAAAAAACCTTGAGATTGTTGGTGCTAAGTTTGAGGATCCTGCATTGAACACTGCTCTTCGTGCATGTCCTAATCTTTCAAACTTATTGCTCCTTGGCTGTGAAGGTCTTACTTCAGTTTCAATTGAGCTGAAGCATTTGGAGCAGTGTAAGCTGGATTTCTTTGGCTTGGGGAACTGCTCACTTTTGATCAATGCTCCTAAAATTCAACTCCTTGAAGTTCACGGCTGTAGTTGGATTAGAGCCCGTGGGACAAGTTCCTTGAGAAATCTTTCAATTGCCAATACTCAAGGAAGAGTCTACATGGTGGATTTTGATAAGCTTGTTTCGTTGGAGTCTCTGTCTTTAAGAGGTGTTCAATGGTGTTGGAATGCAATAAGCAAAATTCTTGAATGTGGGAGTGAGGTGAAACATCTTTACATGAAGGTTGAATTCACTGGAGACTTTGATGCACTTGAACCTTTCCCAGAAATTGACTTTGTTGAGTTTTTCAATAACCATCCAAAGTTGCAAAAGTTTGACATTCATGGAGCCATGTTTGCTGCACTTTGTCAAAAACACAGCCTTAAAAGTGTGGATCCAGATTTTGCCATCTCATGTTTGGAGGAAGTTTGGGTTACGGTTAGATCGCCGTTGAACGCGGAACAGAAGATGAATACTCTCGAATCGTTTATAAAGTATGCCAAGAATTTGAAGGCACTGGTAATAAATATTCTTCGGATGAAGAGTAGCCATAGCAGTGCAGATGATTTCTTTGATGACATTTGCAAGTTTAGATGTTGCAACCCCAAGACCGTTCGCATTGAATAA

Protein sequence

MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPTLRHLELRMDNLVDLQACQESPSKLECLKSAANLESLQLWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQCKLDFFGLGNCSLLINAPKIQLLEVHGCSWIRARGTSSLRNLSIANTQGRVYMVDFDKLVSLESLSLRGVQWCWNAISKILECGSEVKHLYMKVEFTGDFDALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRSPLNAEQKMNTLESFIKYAKNLKALVINILRMKSSHSSADDFFDDICKFRCCNPKTVRIE

Homology

[Close]

BLAST of HG10019027 vs. NCBI nr
Match: XP_038887588.1 (F-box protein At1g10780 [Benincasa hispida])

HSP 1 Score: 837.4 bits (2162), Expect = 5.4e-239
Identity = 402/419 (95.94%), Postives = 413/419 (98.57%), Query Frame = 0


Query: 1   MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDI
Sbjct: 1   MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDI 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPTLRHLELRMDNLVDLQACQESPSKL 120
           IIW++ISSIVHLEELVVYSPFSGAGLASWLSSVGPTLRHLELRMDNLVDLQACQESPSKL
Sbjct: 61  IIWKMISSIVHLEELVVYSPFSGAGLASWLSSVGPTLRHLELRMDNLVDLQACQESPSKL 120

Query: 121 ECLKSAANLESLQLWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTALRACPNLSNLL 180
           ECL+SAANLESL LWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALN+ALRACPNLSNLL
Sbjct: 121 ECLRSAANLESLNLWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNSALRACPNLSNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFFGLGNCSLLINAPKIQLLEVHGCSWIRARGTSSLRN 240
           LLGCEGLT+VSIELKHLEQCKLDF+GLGNCSLLIN+PK+QLLEV GCSWIRARGTSSLRN
Sbjct: 181 LLGCEGLTAVSIELKHLEQCKLDFYGLGNCSLLINSPKLQLLEVQGCSWIRARGTSSLRN 240

Query: 241 LSIANTQGRVYMVDFDKLVSLESLSLRGVQWCWNAISKILECGSEVKHLYMKVEFTGDFD 300
           LSIAN QGRVYMVDFDKLVSLESLSLRGVQWCWNAIS ILECGSEVKHLYMKVEF+GDFD
Sbjct: 241 LSIANNQGRVYMVDFDKLVSLESLSLRGVQWCWNAISNILECGSEVKHLYMKVEFSGDFD 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS 360
           ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLK+VDPDFAISCLEEVWVTVRS
Sbjct: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKNVDPDFAISCLEEVWVTVRS 360

Query: 361 PLNAEQKMNTLESFIKYAKNLKALVINILRMKSSHSSADDFFDDICKFRCCNPKTVRIE 420
           PLNAEQKMNTLESFIKYAKNLK+LVINILRMKSSHSSADDFFDDICKFRCCNP  VRIE
Sbjct: 361 PLNAEQKMNTLESFIKYAKNLKSLVINILRMKSSHSSADDFFDDICKFRCCNPTVVRIE 419

[Close]

BLAST of HG10019027 vs. NCBI nr
Match: XP_011657525.1 (F-box protein At1g10780 [Cucumis sativus] >KGN47914.1 hypothetical protein Csa_003908 [Cucumis sativus])

HSP 1 Score: 822.0 bits (2122), Expect = 2.3e-234
Identity = 397/419 (94.75%), Postives = 407/419 (97.14%), Query Frame = 0


Query: 1   MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDI
Sbjct: 1   MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDI 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPTLRHLELRMDNLVDLQACQESPSKL 120
           IIWRIISSIVHLEELVVYSPF+GAGLASWLSSVGPTLRHLELRMDNLVDLQACQESPSKL
Sbjct: 61  IIWRIISSIVHLEELVVYSPFTGAGLASWLSSVGPTLRHLELRMDNLVDLQACQESPSKL 120

Query: 121 ECLKSAANLESLQLWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTALRACPNLSNLL 180
           ECLKSAANLE+L+LWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTAL ACPNLSNLL
Sbjct: 121 ECLKSAANLETLKLWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTALHACPNLSNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFFGLGNCSLLINAPKIQLLEVHGCSWIRARGTSSLRN 240
           LL CEGL+SVSIELK LEQCKLDF+GLGNCSLLINAPK+QLLEV GCSWIRARGTSSLRN
Sbjct: 181 LLACEGLSSVSIELKLLEQCKLDFYGLGNCSLLINAPKLQLLEVQGCSWIRARGTSSLRN 240

Query: 241 LSIANTQGRVYMVDFDKLVSLESLSLRGVQWCWNAISKILECGSEVKHLYMKVEFTGDFD 300
           LSIAN  GRVYMVDFDKL SLE LSLRG+QWCWNAISKILECGSEVKHLYMKVEFTGD+D
Sbjct: 241 LSIANNHGRVYMVDFDKLASLEVLSLRGIQWCWNAISKILECGSEVKHLYMKVEFTGDYD 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS 360
           ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS
Sbjct: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS 360

Query: 361 PLNAEQKMNTLESFIKYAKNLKALVINILRMKSSHSSADDFFDDICKFRCCNPKTVRIE 420
           PLNAEQKMNTLESF KYAKNLKALVINILRMKSSH SADDFFDDICKF+ C+PK VRIE
Sbjct: 361 PLNAEQKMNTLESFTKYAKNLKALVINILRMKSSHGSADDFFDDICKFKHCHPKIVRIE 419

[Close]

BLAST of HG10019027 vs. NCBI nr
Match: XP_016900720.1 (PREDICTED: F-box protein At1g10780 [Cucumis melo] >KAA0057320.1 F-box protein [Cucumis melo var. makuwa] >TYK13414.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 817.4 bits (2110), Expect = 5.7e-233
Identity = 394/419 (94.03%), Postives = 408/419 (97.37%), Query Frame = 0


Query: 1   MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPD 
Sbjct: 1   MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDN 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPTLRHLELRMDNLVDLQACQESPSKL 120
           IIWRIISSIVHLEELVVYSPF+GAGL+SWLSSVGP+LRHLELRMDNLVDLQACQESPSKL
Sbjct: 61  IIWRIISSIVHLEELVVYSPFTGAGLSSWLSSVGPSLRHLELRMDNLVDLQACQESPSKL 120

Query: 121 ECLKSAANLESLQLWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTALRACPNLSNLL 180
           ECLKSAANLE+L+LWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTAL ACPNLSNLL
Sbjct: 121 ECLKSAANLETLKLWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTALHACPNLSNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFFGLGNCSLLINAPKIQLLEVHGCSWIRARGTSSLRN 240
           LL CEGL+SVSIELK LEQCKLDF+GLGNCSLLINAPK+QLLEV GCSWIRARGT+SLRN
Sbjct: 181 LLACEGLSSVSIELKLLEQCKLDFYGLGNCSLLINAPKLQLLEVQGCSWIRARGTTSLRN 240

Query: 241 LSIANTQGRVYMVDFDKLVSLESLSLRGVQWCWNAISKILECGSEVKHLYMKVEFTGDFD 300
           LSIAN  GRVYMVDFDKLVSLE+LSLRG+QWCW+AIS+ILECGSEVKHLYMKVEFTGDFD
Sbjct: 241 LSIANNHGRVYMVDFDKLVSLETLSLRGIQWCWSAISRILECGSEVKHLYMKVEFTGDFD 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS 360
           ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS
Sbjct: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS 360

Query: 361 PLNAEQKMNTLESFIKYAKNLKALVINILRMKSSHSSADDFFDDICKFRCCNPKTVRIE 420
           PLNAEQKMNTLESF KYAKNLKALVINILRMKSSH SADDFFDDICKFR C+PK VRIE
Sbjct: 361 PLNAEQKMNTLESFTKYAKNLKALVINILRMKSSHGSADDFFDDICKFRHCHPKIVRIE 419

[Close]

BLAST of HG10019027 vs. NCBI nr
Match: XP_023554775.1 (F-box protein At1g10780-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 774.2 bits (1998), Expect = 5.6e-220
Identity = 378/419 (90.21%), Postives = 397/419 (94.75%), Query Frame = 0


Query: 1   MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAI Q ILSHMSNARDVAVCNCVSKRWK STPYIRSLYFPRNSFDNHSGGLSPDI
Sbjct: 1   MDSLPDAIFQYILSHMSNARDVAVCNCVSKRWKYSTPYIRSLYFPRNSFDNHSGGLSPDI 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPTLRHLELRMDNLVDLQACQESPSKL 120
           IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGP+LR LELRMDNLVDLQACQ+S SKL
Sbjct: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120

Query: 121 ECLKSAANLESLQLWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTALRACPNLSNLL 180
           ECLKSAANLESL+LWGVLMTHSPRWDVFQKL+NLEIVGAK +DPALNTALRACPNLSNLL
Sbjct: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFFGLGNCSLLINAPKIQLLEVHGCSWIRARGTSSLRN 240
           LLGCEGLTSVSIELKHLEQCKLDF+GLGNCSL+IN+P IQLLEV GCSWIRA GTSSLR+
Sbjct: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240

Query: 241 LSIANTQGRVYMVDFDKLVSLESLSLRGVQWCWNAISKILECGSEVKHLYMKVEFTGDFD 300
           LSI+N  GRVYMVDFD+LVSLESLS+RGVQWCW+AISK+LE GSEVKHLYMKVEFTGDFD
Sbjct: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS 360
           ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQK+SLK+VDPDF ISCLEEV V+VRS
Sbjct: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360

Query: 361 PLNAEQKMNTLESFIKYAKNLKALVINILRMKSSHSSADDFFDDICKFRCCNPKTVRIE 420
           PLNAEQKMNTLES IKY KNLK +VI ILRMKSSHSSADDFFD+ICKFR  N K VRIE
Sbjct: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 419

[Close]

BLAST of HG10019027 vs. NCBI nr
Match: XP_022967595.1 (F-box protein At1g10780-like [Cucurbita maxima] >XP_022967596.1 F-box protein At1g10780-like [Cucurbita maxima])

HSP 1 Score: 773.1 bits (1995), Expect = 1.2e-219
Identity = 377/419 (89.98%), Postives = 397/419 (94.75%), Query Frame = 0


Query: 1   MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAI Q ILSHMSNARDVAVCNCVSKRWK STPYI+SLYFPRNSFDNHSGGLSPDI
Sbjct: 1   MDSLPDAIFQYILSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPTLRHLELRMDNLVDLQACQESPSKL 120
           IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGP+LR LELRMDNLVDLQACQ+S SKL
Sbjct: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120

Query: 121 ECLKSAANLESLQLWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTALRACPNLSNLL 180
           ECLKSAANLESL+LWGVLMTHSPRWDVFQKL+NLEIVGAK +DPALNTALRACPNLSNLL
Sbjct: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFFGLGNCSLLINAPKIQLLEVHGCSWIRARGTSSLRN 240
           LLGCEGLTSVSIELKHLEQCKLDF+GLGNCSL+IN+P IQLLEV GCSWIRA GTSSLR+
Sbjct: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240

Query: 241 LSIANTQGRVYMVDFDKLVSLESLSLRGVQWCWNAISKILECGSEVKHLYMKVEFTGDFD 300
           LSI+N  GRVYMVDFD+LVSLESLS+RGVQWCW+AISK+LE GSEVKHLYMKVEFTGDFD
Sbjct: 241 LSISNNTGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS 360
           ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQK+SLK+VDPDF ISCLEEV V+VRS
Sbjct: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360

Query: 361 PLNAEQKMNTLESFIKYAKNLKALVINILRMKSSHSSADDFFDDICKFRCCNPKTVRIE 420
           PLNAEQKMNTLES IKY KNLK +VI ILRMKSSHSSADDFFD+ICKFR  N K VRIE
Sbjct: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 419

[Close]

BLAST of HG10019027 vs. ExPASy Swiss-Prot
Match: Q9SAC4 (F-box protein At1g10780 OS=Arabidopsis thaliana OX=3702 GN=At1g10780 PE=2 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 3.8e-155
Identity = 269/419 (64.20%), Postives = 330/419 (78.76%), Query Frame = 0


Query: 1   MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAI+Q ILS++++ARDVA CNCVSKRWK+ST  ++S+ F RNSF++       D 
Sbjct: 1   MDSLPDAILQYILSYLTSARDVAACNCVSKRWKESTDSVKSVVFHRNSFESIMETDDSDS 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPTLRHLELRMDNLVDLQACQESPSKL 120
           I+ ++ISS   LEELVVYSPF+ +GLASW+  V  +LR LELRMDNL   +   E P KL
Sbjct: 61  IVRKMISSSRRLEELVVYSPFTSSGLASWMMHVSSSLRLLELRMDNLASEEVVVEGPLKL 120

Query: 121 ECLKSAANLESLQLWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTALRACPNLSNLL 180
           +C+  A NLE L+LWGVLM   P+WD+F  L++LEIVGAK +D +L+ ALRACPNLSNLL
Sbjct: 121 DCIGVAKNLEILKLWGVLMMSPPKWDMFPNLRSLEIVGAKMDDSSLSHALRACPNLSNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFFGLGNCSLLINAPKIQLLEVHGCSWIRARGTSSLRN 240
           LL CEG+ S+SI+L +LE CKLDF+G GN  L++ + ++  L+V GCSWIR   T  L+N
Sbjct: 181 LLACEGVKSISIDLPYLEHCKLDFYGQGNTLLVLTSQRLVSLDVQGCSWIRVPETKFLKN 240

Query: 241 LSIANTQGRVYMVDFDKLVSLESLSLRGVQWCWNAISKILECGSEVKHLYMKVEFTGDFD 300
           LSI++  GRVYMVDF+ L SLE+LS+RGVQWCW+AI  IL+   +VKHL+MKVEFTG+ +
Sbjct: 241 LSISSVTGRVYMVDFNNLSSLEALSIRGVQWCWDAICMILQQARDVKHLFMKVEFTGN-E 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS 360
           AL+PFPEIDFVEFFNNHPKLQ FDIHGAMFAALCQK+SLK ++  F I CLEEV +TVRS
Sbjct: 301 ALQPFPEIDFVEFFNNHPKLQTFDIHGAMFAALCQKNSLKKLETGFTIPCLEEVVITVRS 360

Query: 361 PLNAEQKMNTLESFIKYAKNLKALVINILRMKSSHSSADDFFDDICKFRCCNPKTVRIE 420
           PLNAEQKMNTLES +KYA+ LK +VI ILRMKS+HSSADDF DDICKFR  N   V IE
Sbjct: 361 PLNAEQKMNTLESLVKYARGLKRMVIRILRMKSNHSSADDFCDDICKFRHMNEHLVHIE 418

[Close]

BLAST of HG10019027 vs. ExPASy TrEMBL
Match: A0A0A0KGD4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G411180 PE=4 SV=1)

HSP 1 Score: 822.0 bits (2122), Expect = 1.1e-234
Identity = 397/419 (94.75%), Postives = 407/419 (97.14%), Query Frame = 0


Query: 1   MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDI
Sbjct: 1   MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDI 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPTLRHLELRMDNLVDLQACQESPSKL 120
           IIWRIISSIVHLEELVVYSPF+GAGLASWLSSVGPTLRHLELRMDNLVDLQACQESPSKL
Sbjct: 61  IIWRIISSIVHLEELVVYSPFTGAGLASWLSSVGPTLRHLELRMDNLVDLQACQESPSKL 120

Query: 121 ECLKSAANLESLQLWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTALRACPNLSNLL 180
           ECLKSAANLE+L+LWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTAL ACPNLSNLL
Sbjct: 121 ECLKSAANLETLKLWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTALHACPNLSNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFFGLGNCSLLINAPKIQLLEVHGCSWIRARGTSSLRN 240
           LL CEGL+SVSIELK LEQCKLDF+GLGNCSLLINAPK+QLLEV GCSWIRARGTSSLRN
Sbjct: 181 LLACEGLSSVSIELKLLEQCKLDFYGLGNCSLLINAPKLQLLEVQGCSWIRARGTSSLRN 240

Query: 241 LSIANTQGRVYMVDFDKLVSLESLSLRGVQWCWNAISKILECGSEVKHLYMKVEFTGDFD 300
           LSIAN  GRVYMVDFDKL SLE LSLRG+QWCWNAISKILECGSEVKHLYMKVEFTGD+D
Sbjct: 241 LSIANNHGRVYMVDFDKLASLEVLSLRGIQWCWNAISKILECGSEVKHLYMKVEFTGDYD 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS 360
           ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS
Sbjct: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS 360

Query: 361 PLNAEQKMNTLESFIKYAKNLKALVINILRMKSSHSSADDFFDDICKFRCCNPKTVRIE 420
           PLNAEQKMNTLESF KYAKNLKALVINILRMKSSH SADDFFDDICKF+ C+PK VRIE
Sbjct: 361 PLNAEQKMNTLESFTKYAKNLKALVINILRMKSSHGSADDFFDDICKFKHCHPKIVRIE 419

[Close]

BLAST of HG10019027 vs. ExPASy TrEMBL
Match: A0A5D3CQW5 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00320 PE=4 SV=1)

HSP 1 Score: 817.4 bits (2110), Expect = 2.8e-233
Identity = 394/419 (94.03%), Postives = 408/419 (97.37%), Query Frame = 0


Query: 1   MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPD 
Sbjct: 1   MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDN 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPTLRHLELRMDNLVDLQACQESPSKL 120
           IIWRIISSIVHLEELVVYSPF+GAGL+SWLSSVGP+LRHLELRMDNLVDLQACQESPSKL
Sbjct: 61  IIWRIISSIVHLEELVVYSPFTGAGLSSWLSSVGPSLRHLELRMDNLVDLQACQESPSKL 120

Query: 121 ECLKSAANLESLQLWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTALRACPNLSNLL 180
           ECLKSAANLE+L+LWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTAL ACPNLSNLL
Sbjct: 121 ECLKSAANLETLKLWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTALHACPNLSNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFFGLGNCSLLINAPKIQLLEVHGCSWIRARGTSSLRN 240
           LL CEGL+SVSIELK LEQCKLDF+GLGNCSLLINAPK+QLLEV GCSWIRARGT+SLRN
Sbjct: 181 LLACEGLSSVSIELKLLEQCKLDFYGLGNCSLLINAPKLQLLEVQGCSWIRARGTTSLRN 240

Query: 241 LSIANTQGRVYMVDFDKLVSLESLSLRGVQWCWNAISKILECGSEVKHLYMKVEFTGDFD 300
           LSIAN  GRVYMVDFDKLVSLE+LSLRG+QWCW+AIS+ILECGSEVKHLYMKVEFTGDFD
Sbjct: 241 LSIANNHGRVYMVDFDKLVSLETLSLRGIQWCWSAISRILECGSEVKHLYMKVEFTGDFD 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS 360
           ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS
Sbjct: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS 360

Query: 361 PLNAEQKMNTLESFIKYAKNLKALVINILRMKSSHSSADDFFDDICKFRCCNPKTVRIE 420
           PLNAEQKMNTLESF KYAKNLKALVINILRMKSSH SADDFFDDICKFR C+PK VRIE
Sbjct: 361 PLNAEQKMNTLESFTKYAKNLKALVINILRMKSSHGSADDFFDDICKFRHCHPKIVRIE 419

[Close]

BLAST of HG10019027 vs. ExPASy TrEMBL
Match: A0A1S4DYC7 (F-box protein At1g10780 OS=Cucumis melo OX=3656 GN=LOC103491319 PE=4 SV=1)

HSP 1 Score: 817.4 bits (2110), Expect = 2.8e-233
Identity = 394/419 (94.03%), Postives = 408/419 (97.37%), Query Frame = 0


Query: 1   MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPD 
Sbjct: 1   MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDN 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPTLRHLELRMDNLVDLQACQESPSKL 120
           IIWRIISSIVHLEELVVYSPF+GAGL+SWLSSVGP+LRHLELRMDNLVDLQACQESPSKL
Sbjct: 61  IIWRIISSIVHLEELVVYSPFTGAGLSSWLSSVGPSLRHLELRMDNLVDLQACQESPSKL 120

Query: 121 ECLKSAANLESLQLWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTALRACPNLSNLL 180
           ECLKSAANLE+L+LWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTAL ACPNLSNLL
Sbjct: 121 ECLKSAANLETLKLWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTALHACPNLSNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFFGLGNCSLLINAPKIQLLEVHGCSWIRARGTSSLRN 240
           LL CEGL+SVSIELK LEQCKLDF+GLGNCSLLINAPK+QLLEV GCSWIRARGT+SLRN
Sbjct: 181 LLACEGLSSVSIELKLLEQCKLDFYGLGNCSLLINAPKLQLLEVQGCSWIRARGTTSLRN 240

Query: 241 LSIANTQGRVYMVDFDKLVSLESLSLRGVQWCWNAISKILECGSEVKHLYMKVEFTGDFD 300
           LSIAN  GRVYMVDFDKLVSLE+LSLRG+QWCW+AIS+ILECGSEVKHLYMKVEFTGDFD
Sbjct: 241 LSIANNHGRVYMVDFDKLVSLETLSLRGIQWCWSAISRILECGSEVKHLYMKVEFTGDFD 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS 360
           ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS
Sbjct: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS 360

Query: 361 PLNAEQKMNTLESFIKYAKNLKALVINILRMKSSHSSADDFFDDICKFRCCNPKTVRIE 420
           PLNAEQKMNTLESF KYAKNLKALVINILRMKSSH SADDFFDDICKFR C+PK VRIE
Sbjct: 361 PLNAEQKMNTLESFTKYAKNLKALVINILRMKSSHGSADDFFDDICKFRHCHPKIVRIE 419

[Close]

BLAST of HG10019027 vs. ExPASy TrEMBL
Match: A0A6J1HSM0 (F-box protein At1g10780-like OS=Cucurbita maxima OX=3661 GN=LOC111467046 PE=4 SV=1)

HSP 1 Score: 773.1 bits (1995), Expect = 6.0e-220
Identity = 377/419 (89.98%), Postives = 397/419 (94.75%), Query Frame = 0


Query: 1   MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAI Q ILSHMSNARDVAVCNCVSKRWK STPYI+SLYFPRNSFDNHSGGLSPDI
Sbjct: 1   MDSLPDAIFQYILSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPTLRHLELRMDNLVDLQACQESPSKL 120
           IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGP+LR LELRMDNLVDLQACQ+S SKL
Sbjct: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120

Query: 121 ECLKSAANLESLQLWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTALRACPNLSNLL 180
           ECLKSAANLESL+LWGVLMTHSPRWDVFQKL+NLEIVGAK +DPALNTALRACPNLSNLL
Sbjct: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFFGLGNCSLLINAPKIQLLEVHGCSWIRARGTSSLRN 240
           LLGCEGLTSVSIELKHLEQCKLDF+GLGNCSL+IN+P IQLLEV GCSWIRA GTSSLR+
Sbjct: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240

Query: 241 LSIANTQGRVYMVDFDKLVSLESLSLRGVQWCWNAISKILECGSEVKHLYMKVEFTGDFD 300
           LSI+N  GRVYMVDFD+LVSLESLS+RGVQWCW+AISK+LE GSEVKHLYMKVEFTGDFD
Sbjct: 241 LSISNNTGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS 360
           ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQK+SLK+VDPDF ISCLEEV V+VRS
Sbjct: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360

Query: 361 PLNAEQKMNTLESFIKYAKNLKALVINILRMKSSHSSADDFFDDICKFRCCNPKTVRIE 420
           PLNAEQKMNTLES IKY KNLK +VI ILRMKSSHSSADDFFD+ICKFR  N K VRIE
Sbjct: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 419

[Close]

BLAST of HG10019027 vs. ExPASy TrEMBL
Match: A0A6J1HJ43 (F-box protein At1g10780-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464040 PE=4 SV=1)

HSP 1 Score: 772.7 bits (1994), Expect = 7.8e-220
Identity = 376/419 (89.74%), Postives = 397/419 (94.75%), Query Frame = 0


Query: 1   MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAI Q +LSHMSNARDVAVCNCVSKRWK STPYI+SLYFPRNSFDNHSGGLSPDI
Sbjct: 22  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 81

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPTLRHLELRMDNLVDLQACQESPSKL 120
           IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGP+LR LELRMDNLVDLQACQ+S SKL
Sbjct: 82  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 141

Query: 121 ECLKSAANLESLQLWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTALRACPNLSNLL 180
           ECLKSAANLESL+LWGVLMTHSPRWDVFQKL+NLEIVGAK +DPALNTALRACPNLSNLL
Sbjct: 142 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 201

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFFGLGNCSLLINAPKIQLLEVHGCSWIRARGTSSLRN 240
           LLGCEGLTSVSIELKHLEQCKLDF+GLGNCSL+IN+P IQLLEV GCSWIRA GTSSLR+
Sbjct: 202 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 261

Query: 241 LSIANTQGRVYMVDFDKLVSLESLSLRGVQWCWNAISKILECGSEVKHLYMKVEFTGDFD 300
           LSI+N  GRVYMVDFD+LVSLESLS+RGVQWCW+AISK+LE GSEVKHLYMKVEFTGDFD
Sbjct: 262 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 321

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS 360
           ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQK+SLK+VDPDF ISCLEEV V+VRS
Sbjct: 322 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 381

Query: 361 PLNAEQKMNTLESFIKYAKNLKALVINILRMKSSHSSADDFFDDICKFRCCNPKTVRIE 420
           PLNAEQKMNTLES IKY KNLK +VI ILRMKSSHSSADDFFD+ICKFR  N K VRIE
Sbjct: 382 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 440

[Close]

BLAST of HG10019027 vs. TAIR 10
Match: AT1G10780.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 549.3 bits (1414), Expect = 2.7e-156
Identity = 269/419 (64.20%), Postives = 330/419 (78.76%), Query Frame = 0


Query: 1   MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAI+Q ILS++++ARDVA CNCVSKRWK+ST  ++S+ F RNSF++       D 
Sbjct: 1   MDSLPDAILQYILSYLTSARDVAACNCVSKRWKESTDSVKSVVFHRNSFESIMETDDSDS 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPTLRHLELRMDNLVDLQACQESPSKL 120
           I+ ++ISS   LEELVVYSPF+ +GLASW+  V  +LR LELRMDNL   +   E P KL
Sbjct: 61  IVRKMISSSRRLEELVVYSPFTSSGLASWMMHVSSSLRLLELRMDNLASEEVVVEGPLKL 120

Query: 121 ECLKSAANLESLQLWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTALRACPNLSNLL 180
           +C+  A NLE L+LWGVLM   P+WD+F  L++LEIVGAK +D +L+ ALRACPNLSNLL
Sbjct: 121 DCIGVAKNLEILKLWGVLMMSPPKWDMFPNLRSLEIVGAKMDDSSLSHALRACPNLSNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFFGLGNCSLLINAPKIQLLEVHGCSWIRARGTSSLRN 240
           LL CEG+ S+SI+L +LE CKLDF+G GN  L++ + ++  L+V GCSWIR   T  L+N
Sbjct: 181 LLACEGVKSISIDLPYLEHCKLDFYGQGNTLLVLTSQRLVSLDVQGCSWIRVPETKFLKN 240

Query: 241 LSIANTQGRVYMVDFDKLVSLESLSLRGVQWCWNAISKILECGSEVKHLYMKVEFTGDFD 300
           LSI++  GRVYMVDF+ L SLE+LS+RGVQWCW+AI  IL+   +VKHL+MKVEFTG+ +
Sbjct: 241 LSISSVTGRVYMVDFNNLSSLEALSIRGVQWCWDAICMILQQARDVKHLFMKVEFTGN-E 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS 360
           AL+PFPEIDFVEFFNNHPKLQ FDIHGAMFAALCQK+SLK ++  F I CLEEV +TVRS
Sbjct: 301 ALQPFPEIDFVEFFNNHPKLQTFDIHGAMFAALCQKNSLKKLETGFTIPCLEEVVITVRS 360

Query: 361 PLNAEQKMNTLESFIKYAKNLKALVINILRMKSSHSSADDFFDDICKFRCCNPKTVRIE 420
           PLNAEQKMNTLES +KYA+ LK +VI ILRMKS+HSSADDF DDICKFR  N   V IE
Sbjct: 361 PLNAEQKMNTLESLVKYARGLKRMVIRILRMKSNHSSADDFCDDICKFRHMNEHLVHIE 418

The following BLAST results are available for this feature:

BLAST of HG10019027 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887588.1	5.4e-239	95.94	F-box protein At1g10780 [Benincasa hispida]	[more]
XP_011657525.1	2.3e-234	94.75	F-box protein At1g10780 [Cucumis sativus] >KGN47914.1 hypothetical protein Csa_0...	[more]
XP_016900720.1	5.7e-233	94.03	PREDICTED: F-box protein At1g10780 [Cucumis melo] >KAA0057320.1 F-box protein [C...	[more]
XP_023554775.1	5.6e-220	90.21	F-box protein At1g10780-like [Cucurbita pepo subsp. pepo]	[more]
XP_022967595.1	1.2e-219	89.98	F-box protein At1g10780-like [Cucurbita maxima] >XP_022967596.1 F-box protein At...	[more]

BLAST of HG10019027 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SAC4	3.8e-155	64.20	F-box protein At1g10780 OS=Arabidopsis thaliana OX=3702 GN=At1g10780 PE=2 SV=1	[more]

BLAST of HG10019027 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGD4	1.1e-234	94.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G411180 PE=4 SV=1	[more]
A0A5D3CQW5	2.8e-233	94.03	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00320 ...	[more]
A0A1S4DYC7	2.8e-233	94.03	F-box protein At1g10780 OS=Cucumis melo OX=3656 GN=LOC103491319 PE=4 SV=1	[more]
A0A6J1HSM0	6.0e-220	89.98	F-box protein At1g10780-like OS=Cucurbita maxima OX=3661 GN=LOC111467046 PE=4 SV...	[more]
A0A6J1HJ43	7.8e-220	89.74	F-box protein At1g10780-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of HG10019027 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10780.1	2.7e-156	64.20	F-box/RNI-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 1..300 e-value: 1.1E-14 score: 55.7
None	No IPR available	PANTHER	PTHR32212	CYCLIN-LIKE F-BOX	coord: 1..415
None	No IPR available	PANTHER	PTHR32212:SF248	CYCLIN-LIKE F-BOX	coord: 1..415
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 63..326
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 1..36

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10019027.1	HG10019027.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding