HG10019013 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10019013
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr04: 14078953 .. 14079282 (+)
RNA-Seq ExpressionHG10019013
SyntenyHG10019013
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCCAGAGATAACACATGATCAAAACCGTCGAATGGTGGTAAACATGGAGGAATGTGAGGCGTTGAAACGACCCGGTGAGGATGATCAAGAGGGTGTCGATGAATTCAAGAATCTTGGAGAGGTAGAAGACATAAGCCCAGAAGAAGAGAGGTCCAACTGGTGGGGTGCGAGGTGGAAAGCAGACAATCCAGTAGAGATGAGGCACATGGTAAATGGAAGAGAGAGTGCATCCAAGGGCCATGATGAAGGAGAGGATGAGAAGGACAAAGCTGAGATTGTGAAAGGGAAATGGAAGGAATGGGGATGTGGGAGAGGAGGAAGGTGA

mRNA sequence

ATGAAGCCAGAGATAACACATGATCAAAACCGTCGAATGGTGGTAAACATGGAGGAATGTGAGGCGTTGAAACGACCCGGTGAGGATGATCAAGAGGGTGTCGATGAATTCAAGAATCTTGGAGAGGTAGAAGACATAAGCCCAGAAGAAGAGAGGTCCAACTGGTGGGGTGCGAGGTGGAAAGCAGACAATCCAGTAGAGATGAGGCACATGGTAAATGGAAGAGAGAGTGCATCCAAGGGCCATGATGAAGGAGAGGATGAGAAGGACAAAGCTGAGATTGTGAAAGGGAAATGGAAGGAATGGGGATGTGGGAGAGGAGGAAGGTGA

Coding sequence (CDS)

ATGAAGCCAGAGATAACACATGATCAAAACCGTCGAATGGTGGTAAACATGGAGGAATGTGAGGCGTTGAAACGACCCGGTGAGGATGATCAAGAGGGTGTCGATGAATTCAAGAATCTTGGAGAGGTAGAAGACATAAGCCCAGAAGAAGAGAGGTCCAACTGGTGGGGTGCGAGGTGGAAAGCAGACAATCCAGTAGAGATGAGGCACATGGTAAATGGAAGAGAGAGTGCATCCAAGGGCCATGATGAAGGAGAGGATGAGAAGGACAAAGCTGAGATTGTGAAAGGGAAATGGAAGGAATGGGGATGTGGGAGAGGAGGAAGGTGA

Protein sequence

MKPEITHDQNRRMVVNMEECEALKRPGEDDQEGVDEFKNLGEVEDISPEEERSNWWGARWKADNPVEMRHMVNGRESASKGHDEGEDEKDKAEIVKGKWKEWGCGRGGR
Homology
BLAST of HG10019013 vs. NCBI nr
Match: KAF9860199.1 (hypothetical protein H0E87_029983 [Populus deltoides])

HSP 1 Score: 90.9 bits (224), Expect = 7.4e-15
Identity = 49/93 (52.69%), Postives = 68/93 (73.12%), Query Frame = 0

Query: 2   KPEITHDQNRRMVVNMEECEALKRPGEDDQEGVDEFKNLGEVEDISPEEERSNWWGARWK 61
           +P++ HD +R +VV++EECEAL R  +DDQ+GVD+FKNLGEVE + PE+ER    G   +
Sbjct: 37  QPQVAHDHHRCVVVDVEECEALDRIAQDDQKGVDKFKNLGEVEYVGPEKERPRLRGVGRE 96

Query: 62  ADNPVEMRHMVNGR--ESASKGHDEGEDEKDKA 93
           A++ VE+R    G   E A+KGHDEGE E+D+A
Sbjct: 97  ANDVVEVRAGGGGEDGEGAAKGHDEGEKEEDEA 129

BLAST of HG10019013 vs. NCBI nr
Match: KAF7803644.1 (hypothetical protein G2W53_042755 [Senna tora])

HSP 1 Score: 77.4 bits (189), Expect = 8.4e-11
Identity = 49/109 (44.95%), Postives = 70/109 (64.22%), Query Frame = 0

Query: 3   PEITHDQNRRMVVNMEECEALKRPGEDDQEGVDEFKNLGEVEDISPEEERSNWWGARWKA 62
           P   HD++  +VV++EE EA    GEDD+E VDEF++ GEVED+ PEEE +   G   +A
Sbjct: 101 PHEAHDEDGCVVVHVEEREASDGVGEDDEERVDEFEDFGEVEDVGPEEEWAGGRGVGREA 160

Query: 63  DNPVEMRHMVNGR--ESASKGHDEGEDEKDKAEIVKGKWKEWGCGRGGR 110
           ++P E+R +  G   E AS+GH+EGE+E++  E+V G       GR GR
Sbjct: 161 EDPAEVRSVGGGEGGEDASEGHEEGEEEEE--EVVDGGDGLEEAGRKGR 207

BLAST of HG10019013 vs. NCBI nr
Match: KZV27251.1 (hypothetical protein F511_04704 [Dorcoceras hygrometricum])

HSP 1 Score: 74.7 bits (182), Expect = 5.5e-10
Identity = 47/112 (41.96%), Postives = 72/112 (64.29%), Query Frame = 0

Query: 2   KPEITHDQNRRMVVNMEECE-ALKRPGEDDQEGVDEFKNLGEVEDISPEEERSNWWG-AR 61
           +P++ H  + R+VV++EE E  +    ++DQ+GVDEF++LGEVE + PEE  S+W G   
Sbjct: 93  EPQVAHHHHHRVVVHVEEGEPPVTGSAQEDQQGVDEFEDLGEVEHVGPEEGGSSWRGVVE 152

Query: 62  WKADNPVEM--RHMVNGRESASKGHDEGEDEKDKAEIVKGKWKEWGCGRGGR 110
           W+A+ P E+  R +V G E A+  H+EGE+ +D  E+V G  +     RGGR
Sbjct: 153 WEANGPAEVVGRRLVEGGEGAADDHEEGEEAED--EVVGGGDE---AERGGR 199

BLAST of HG10019013 vs. NCBI nr
Match: KAB5563745.1 (hypothetical protein DKX38_003799 [Salix brachista])

HSP 1 Score: 58.9 bits (141), Expect = 3.1e-05
Identity = 34/86 (39.53%), Postives = 51/86 (59.30%), Query Frame = 0

Query: 5   ITHDQNRRMVVNMEECEALKRPGEDDQEGVDEFKNLGEVEDISPEEERSNWWGARWKADN 64
           + HD N  MV+++E+ +      +DDQE V E  NL E+E++ PEEER    G    A++
Sbjct: 62  VAHDHNGCMVIHVEKSQPSDGVAQDDQESVHELDNLREIENMRPEEERPFRRGVYGVAND 121

Query: 65  PVEMRHMVNGRESASKGHDEGEDEKD 91
            V +  +VN  E A+ GH EGE E++
Sbjct: 122 VVHIGCVVNDGEGAAGGHGEGESEEE 147

BLAST of HG10019013 vs. NCBI nr
Match: KAF9685026.1 (hypothetical protein SADUNF_Sadunf03G0011500 [Salix dunnii])

HSP 1 Score: 56.2 bits (134), Expect = 2.0e-04
Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 0

Query: 32 EGVDEFKNLGEVEDISPEEERSNWWGARWKADNPVEMRHMVNG--RESASKGHDEGEDEK 91
          +GVD+FKN GEVE + PE+ER  W G   +A++ VE+R    G   E A KGHDEGE E+
Sbjct: 37 KGVDKFKNFGEVEYVGPEKERPRWRGVGREANDVVEVRAGGGGDDGEGAPKGHDEGEKEE 96

Query: 92 DKA 93
           +A
Sbjct: 97 HEA 99

BLAST of HG10019013 vs. ExPASy TrEMBL
Match: A0A2Z7AZC9 (Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_04704 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.6e-10
Identity = 47/112 (41.96%), Postives = 72/112 (64.29%), Query Frame = 0

Query: 2   KPEITHDQNRRMVVNMEECE-ALKRPGEDDQEGVDEFKNLGEVEDISPEEERSNWWG-AR 61
           +P++ H  + R+VV++EE E  +    ++DQ+GVDEF++LGEVE + PEE  S+W G   
Sbjct: 93  EPQVAHHHHHRVVVHVEEGEPPVTGSAQEDQQGVDEFEDLGEVEHVGPEEGGSSWRGVVE 152

Query: 62  WKADNPVEM--RHMVNGRESASKGHDEGEDEKDKAEIVKGKWKEWGCGRGGR 110
           W+A+ P E+  R +V G E A+  H+EGE+ +D  E+V G  +     RGGR
Sbjct: 153 WEANGPAEVVGRRLVEGGEGAADDHEEGEEAED--EVVGGGDE---AERGGR 199

BLAST of HG10019013 vs. ExPASy TrEMBL
Match: A0A6N2KAA2 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS48144 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.0e-06
Identity = 38/100 (38.00%), Postives = 59/100 (59.00%), Query Frame = 0

Query: 4   EITHDQNRRMVVNMEECEALKRPGEDDQEGVDEFKNLGEVEDISPEEERSNWWGARWKAD 63
           E+ HD +  MV+N+E+ +      +DDQE V E +NL E+E++ PEEER    G    A+
Sbjct: 67  EVAHDHDGCMVINVEKSQPSDGAAQDDQESVHELENLREIENMRPEEERPFRRGVHGVAN 126

Query: 64  NPVEMRHMVNGRESASKGHDEGEDEKDKAEIVKGKWKEWG 104
           + V    +VN  E A+ GH EGE E++  +++ G+ K  G
Sbjct: 127 DVVHTGCVVNDGEGAAGGHGEGEREEE--DVMHGREKPEG 164

BLAST of HG10019013 vs. ExPASy TrEMBL
Match: A0A5N5N8P8 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_003799 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.5e-05
Identity = 34/86 (39.53%), Postives = 51/86 (59.30%), Query Frame = 0

Query: 5   ITHDQNRRMVVNMEECEALKRPGEDDQEGVDEFKNLGEVEDISPEEERSNWWGARWKADN 64
           + HD N  MV+++E+ +      +DDQE V E  NL E+E++ PEEER    G    A++
Sbjct: 62  VAHDHNGCMVIHVEKSQPSDGVAQDDQESVHELDNLREIENMRPEEERPFRRGVYGVAND 121

Query: 65  PVEMRHMVNGRESASKGHDEGEDEKD 91
            V +  +VN  E A+ GH EGE E++
Sbjct: 122 VVHIGCVVNDGEGAAGGHGEGESEEE 147

BLAST of HG10019013 vs. ExPASy TrEMBL
Match: A0A5N5N8S1 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_003798 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 9.7e-05
Identity = 33/68 (48.53%), Postives = 45/68 (66.18%), Query Frame = 0

Query: 32  EGVDEFKNLGEVEDISPEEERSNWWGARWKADNPVEMRHMVNG--RESASKGHDEGEDEK 91
           +GVD+FKN GEVE + PE+ER  W G   +A++  E+R    G   E A+KGHDEG  EK
Sbjct: 37  KGVDKFKNFGEVEYVGPEKERPGWRGVGREANDVAEVRAGGGGDDGEGAAKGHDEG--EK 96

Query: 92  DKAEIVKG 98
           ++ E V+G
Sbjct: 97  EEGEAVEG 102

BLAST of HG10019013 vs. ExPASy TrEMBL
Match: A0A6N2MM41 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS392390 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 6.3e-04
Identity = 36/82 (43.90%), Postives = 52/82 (63.41%), Query Frame = 0

Query: 32  EGVDEFKNLGEVEDISPEEERSNWWGARWKADNPVEMRHMVNG--RESASKGHDEGEDEK 91
           +GVD+FKN GEVE + PE+ER  W G   +A++  E+R    G   E A+KGHDEG  +K
Sbjct: 37  KGVDKFKNFGEVEYVGPEKERPGWRGVGREANDVAEVRAGGGGDDGEGAAKGHDEG--DK 96

Query: 92  DKAEIVKG-KW-KEWGCGRGGR 110
           ++ E V+G  W ++ G  +G R
Sbjct: 97  EEGEAVEGCDWFEDVGSSKGRR 116

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAF9860199.17.4e-1552.69hypothetical protein H0E87_029983 [Populus deltoides][more]
KAF7803644.18.4e-1144.95hypothetical protein G2W53_042755 [Senna tora][more]
KZV27251.15.5e-1041.96hypothetical protein F511_04704 [Dorcoceras hygrometricum][more]
KAB5563745.13.1e-0539.53hypothetical protein DKX38_003799 [Salix brachista][more]
KAF9685026.12.0e-0450.79hypothetical protein SADUNF_Sadunf03G0011500 [Salix dunnii][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2Z7AZC92.6e-1041.96Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_04704 PE=4... [more]
A0A6N2KAA23.0e-0638.00Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS48144 PE=4 SV=1[more]
A0A5N5N8P81.5e-0539.53Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_003799 PE=4 SV=1[more]
A0A5N5N8S19.7e-0548.53Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_003798 PE=4 SV=1[more]
A0A6N2MM416.3e-0443.90Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS392390 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..109

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10019013.1HG10019013.1mRNA