HG10018783 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGATCCCAAATATGCCTATCCCTATCCAGCCCCGCAAGGTATTTTTCTCACACGTTACGTTTTAGCAGTTGAGTTATGTTCAGGTTGACCTCGTTCTAAGTTTCGTTTGATTTAGTATTCTGGGTGTTGTGAAATTTATTTGCAGGAGGGTATTATCAAGGGCCACCCGTGATGGCGCCACCACAATATGCCGCCCCGCCGCCCAAAAGACAGCCGGGCTTCTTGGAGGGATGGTATGCCAAAAAGCTTGTTCTTTGTTGA ATGAGTGATCCCAAATATGCCTATCCCTATCCAGCCCCGCAAGGAGGGTATTATCAAGGGCCACCCGTGATGGCGCCACCACAATATGCCGCCCCGCCGCCCAAAAGACAGCCGGGCTTCTTGGAGGGATGGTATGCCAAAAAGCTTGTTCTTTGTTGA ATGAGTGATCCCAAATATGCCTATCCCTATCCAGCCCCGCAAGGAGGGTATTATCAAGGGCCACCCGTGATGGCGCCACCACAATATGCCGCCCCGCCGCCCAAAAGACAGCCGGGCTTCTTGGAGGGATGGTATGCCAAAAAGCTTGTTCTTTGTTGA MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGWYAKKLVLC Homology
BLAST of HG10018783 vs. NCBI nr
Match: KAA0031406.1 (cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa] >TYK06857.1 cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa]) HSP 1 Score: 98.6 bits (244), Expect = 1.7e-17 Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0
BLAST of HG10018783 vs. NCBI nr
Match: KAG6571885.1 (hypothetical protein SDJN03_28613, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011569.1 hypothetical protein SDJN02_26475 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 93.2 bits (230), Expect = 7.1e-16 Identity = 43/52 (82.69%), Postives = 43/52 (82.69%), Query Frame = 0
BLAST of HG10018783 vs. NCBI nr
Match: KAF9609677.1 (hypothetical protein IFM89_017856 [Coptis chinensis]) HSP 1 Score: 87.4 bits (215), Expect = 3.9e-14 Identity = 40/52 (76.92%), Postives = 42/52 (80.77%), Query Frame = 0
BLAST of HG10018783 vs. NCBI nr
Match: PQP99874.1 (uncharacterized protein Pyn_05607 [Prunus yedoensis var. nudiflora] >PQQ01249.1 uncharacterized protein Pyn_09821 [Prunus yedoensis var. nudiflora]) HSP 1 Score: 85.9 bits (211), Expect = 1.1e-13 Identity = 41/53 (77.36%), Postives = 43/53 (81.13%), Query Frame = 0
BLAST of HG10018783 vs. NCBI nr
Match: CAB4283958.1 (unnamed protein product [Prunus armeniaca] >CAB4314388.1 unnamed protein product [Prunus armeniaca]) HSP 1 Score: 84.7 bits (208), Expect = 2.5e-13 Identity = 40/53 (75.47%), Postives = 43/53 (81.13%), Query Frame = 0
BLAST of HG10018783 vs. ExPASy TrEMBL
Match: A0A5A7SN04 (Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001610 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 8.2e-18 Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0
BLAST of HG10018783 vs. ExPASy TrEMBL
Match: A0A314Y8T5 (CYSTM domain-containing protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_05607 PE=3 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 5.5e-14 Identity = 41/53 (77.36%), Postives = 43/53 (81.13%), Query Frame = 0
BLAST of HG10018783 vs. ExPASy TrEMBL
Match: A0A6J5XT78 (CYSTM domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS39353 PE=3 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.2e-13 Identity = 40/53 (75.47%), Postives = 43/53 (81.13%), Query Frame = 0
BLAST of HG10018783 vs. ExPASy TrEMBL
Match: B9SMJ5 (CYSTM domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_0230320 PE=3 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.1e-13 Identity = 41/52 (78.85%), Postives = 42/52 (80.77%), Query Frame = 0
BLAST of HG10018783 vs. ExPASy TrEMBL
Match: A0A2P5AQS9 (Cysteine-rich transmembrane CYSTM domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_309210 PE=3 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 4.6e-13 Identity = 40/52 (76.92%), Postives = 42/52 (80.77%), Query Frame = 0
BLAST of HG10018783 vs. TAIR 10
Match: AT4G33660.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 56.6 bits (135), Expect = 6.8e-09 Identity = 35/62 (56.45%), Postives = 36/62 (58.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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