HG10018706 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10018706
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Endo-1,4-beta-xylanase 4
Location	Chr04: 7156479 .. 7158206 (+)
RNA-Seq Expression	HG10018706
Synteny	HG10018706

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTACCGCACGCCATGGATCTTCTTCTTTTTCTCTTCCTAGCTCATTTATCATCTCCTTATCATTTTGTCTCGCTCTCCTTAGATCTCTTTTCTGCGAAGTTTTACCTACAAACGAAGTCACCGATTGCAAGCTTTGCCACCATGTGGTCGTCAGAGGAATCGACCAGTGAGTATGGGGTTGTTTCGTGGTTATTGTTAAACTTTTGGTTTCTGTTATATGGGTTGACTTCAATTAAATCACCGATTTGATTTTGGGTTTGGTAGGGCTTTTAGAATACTTCAATACAGTGTATTTTCTGTTTTTAGATTTGTTGTAGTTTCTGACTTGAGTTTTATCATTTTGAGTGTGTAGGGGTAGTTTAGGTTTTTGCTCATTTGTATTTTTTTTATTTTAAATAATCGTTTTGTTATTTTTACAATTTTGAAAAGCTTTTGCTATTTTTCCAAATGAAACTTTAGATTTTGCTATTTATCTGGTCAGCCCTTTATTTAAAGATCTCAAGGAGGTCTTTGTTCACCTTCAATTTGTTTGTTTTTTTTACCACATCTCTTAAAAATGTCTTTAATTTCAACTGGTTTAGTAACTTCAAGATGTTAGGAAAAAATACCTAATTAGTTCTTGAAATTTGAACAATAGATGCATTTCCTCCTTAAATTTTCAAAATATACATTTTTAGAATAGATACATTTGATCTCTAAATTTTTAAAATGTATATTTTTAGTAAAAAAAATTAAAAAATATATTTAAAAATAAAGTAATTTTTTAATTATTTTAAATAATTATAGGATATTTTGAATTAAAAATAATTTTAGAGAGAAGAAATAATTTTTTTAATTTAAAATAATACAAAAAAAGTAATGCAGACATTATGAACCTATTTTAAAAATTTTTAAAAACTAAAAAGCTACGTTTTTAAAATTTTAAATTATTTTGTGTTATATATATACACTCTACGTTATGAAAATGTGGTTAGGCAACATTGCAGGAGGAGAGTGAAAATCCAAGCAATCAACCGAGAAGACAATCCCCTCCCCAATGCAACCATCGCTCTACCACTTTCAAGAACAAAATGAAATGGTATAATACCGAGCAAATGTCGGGCAATGTCGATTACTCCATTTTCGACGCCATGATGGACTTCACCAAGCACCACAACATCGTCGTTCGTGGCCACAATATCTTTTGGGACGATTAACAATATCAACAAGTCTGGCTGAAATCTCTCTCGATGAGAGATCTCTACCGTGCCGCCTGACGGAGACTCAATTCGGTCATGTCTAAGTATCGAGGGCAAGTGATTGCTTGGATGTGGAGAATGAGAATCTCCATTTGATTTCTTTGAGAGCAAATTAGGGCGGAGTGCTTCCGGTTTGTTCTATAATTGGGCGATGAAAGTCAATCAATCGGTTACATTGTTTCTTTATGAGTTTAATACCATTGAGTATAGCGGCGATGCGATTTCTTCTCCAGCTAGGTATTTTCAGAAGCTAGATGCTATTAGACGATTTCTTGGTAATAGTGGCGGCAGATTTGTGATTGGACTGGAATCACATTTCGGTCTTTCTCCTAATATTCCTTATATGAGATCCACCATTAATACGCTTGGTTCTGTTGGAATTCCGATTTGGCTCACCGAAGTAGATGTTTATAACTTGCAAAATCAAGTACAGTTCTTGAAATCTTACTCAAACAAATTAATGTTTATTCTGCCAACTTACTGTTGA

mRNA sequence

ATGCTACCGCACGCCATGGATCTTCTTCTTTTTCTCTTCCTAGCTCATTTATCATCTCCTTATCATTTTGTCTCGCTCTCCTTAGATCTCTTTTCTGCGAAGTTTTACCTACAAACGAAGTCACCGATTGCAAGCTTTGCCACCATGTGGTCGTCAGAGGAATCGACCAGGCGGAGTGCTTCCGGTTTGTTCTATAATTGGGCGATGAAAGTCAATCAATCGGTTACATTGTTTCTTTATGAGTTTAATACCATTGAGTATAGCGGCGATGCGATTTCTTCTCCAGCTAGGTATTTTCAGAAGCTAGATGCTATTAGACGATTTCTTGGTAATAGTGGCGGCAGATTTGTGATTGGACTGGAATCACATTTCGGTCTTTCTCCTAATATTCCTTATATGAGATCCACCATTAATACGCTTGGTTCTGTTGGAATTCCGATTTGGCTCACCGAAGTAGATGTTTATAACTTGCAAAATCAAGTACAGTTCTTGAAATCTTACTCAAACAAATTAATGTTTATTCTGCCAACTTACTGTTGA

Coding sequence (CDS)

ATGCTACCGCACGCCATGGATCTTCTTCTTTTTCTCTTCCTAGCTCATTTATCATCTCCTTATCATTTTGTCTCGCTCTCCTTAGATCTCTTTTCTGCGAAGTTTTACCTACAAACGAAGTCACCGATTGCAAGCTTTGCCACCATGTGGTCGTCAGAGGAATCGACCAGGCGGAGTGCTTCCGGTTTGTTCTATAATTGGGCGATGAAAGTCAATCAATCGGTTACATTGTTTCTTTATGAGTTTAATACCATTGAGTATAGCGGCGATGCGATTTCTTCTCCAGCTAGGTATTTTCAGAAGCTAGATGCTATTAGACGATTTCTTGGTAATAGTGGCGGCAGATTTGTGATTGGACTGGAATCACATTTCGGTCTTTCTCCTAATATTCCTTATATGAGATCCACCATTAATACGCTTGGTTCTGTTGGAATTCCGATTTGGCTCACCGAAGTAGATGTTTATAACTTGCAAAATCAAGTACAGTTCTTGAAATCTTACTCAAACAAATTAATGTTTATTCTGCCAACTTACTGTTGA

Protein sequence

MLPHAMDLLLFLFLAHLSSPYHFVSLSLDLFSAKFYLQTKSPIASFATMWSSEESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQNQVQFLKSYSNKLMFILPTYC

Homology

[Close]

BLAST of HG10018706 vs. NCBI nr
Match: XP_038887131.1 (endo-1,4-beta-xylanase 5-like [Benincasa hispida])

HSP 1 Score: 173.7 bits (439), Expect = 1.4e-39
Identity = 84/106 (79.25%), Postives = 90/106 (84.91%), Query Frame = 0


Query: 60  ASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIG 119
           ASGLFYNWAMK +QS+ LFL EFNTIEYSGDA SSPARY QKLDAIRRF GNSGGRF IG
Sbjct: 359 ASGLFYNWAMKADQSIPLFLNEFNTIEYSGDAASSPARYLQKLDAIRRFPGNSGGRFAIG 418

Query: 120 LESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQNQVQFLK 166
           LESHFG +PNIPYMRS I+TLGS G+PIWLTEVDV N  NQ   L+
Sbjct: 419 LESHFGPNPNIPYMRSAIDTLGSAGVPIWLTEVDVSNSPNQAYNLE 464

[Close]

BLAST of HG10018706 vs. NCBI nr
Match: XP_023553798.1 (uncharacterized protein LOC111811263 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 167.2 bits (422), Expect = 1.3e-37
Identity = 79/113 (69.91%), Postives = 91/113 (80.53%), Query Frame = 0


Query: 53  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNS 112
           E     +ASG+FYNWAMK + S+ LF+ E+NTIEYSGDA SSPA+Y QKLD+IRR+ GNS
Sbjct: 349 ERKLGSAASGMFYNWAMKTDGSIPLFMNEYNTIEYSGDAASSPAKYLQKLDSIRRYSGNS 408

Query: 113 GGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQNQVQFLK 166
           GGRF IGLESHFG SPNIPYMRS I+TLGS G+PIWLTEVDV N  NQ   L+
Sbjct: 409 GGRFAIGLESHFGPSPNIPYMRSAIDTLGSAGVPIWLTEVDVSNSPNQAHDLE 461

[Close]

BLAST of HG10018706 vs. NCBI nr
Match: KAG6571918.1 (Endo-1,4-beta-xylanase 5-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 166.8 bits (421), Expect = 1.7e-37
Identity = 79/113 (69.91%), Postives = 92/113 (81.42%), Query Frame = 0


Query: 53  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNS 112
           E     +ASG+FYNWAMK + S+ LF+ ++NTIEYSGDA SSPA+Y QKLD+IRR+ GNS
Sbjct: 350 ERKLGSAASGMFYNWAMKRDGSIPLFMNDYNTIEYSGDAASSPAKYLQKLDSIRRYSGNS 409

Query: 113 GGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQNQVQFLK 166
           GGRF IGLESHFG SPNIPYMRS I+TLGS G+PIWLTEVDV N  NQ Q L+
Sbjct: 410 GGRFAIGLESHFGPSPNIPYMRSAIDTLGSAGVPIWLTEVDVSNSPNQAQDLE 462

[Close]

BLAST of HG10018706 vs. NCBI nr
Match: XP_022952795.1 (uncharacterized protein LOC111455386 [Cucurbita moschata])

HSP 1 Score: 166.8 bits (421), Expect = 1.7e-37
Identity = 79/113 (69.91%), Postives = 92/113 (81.42%), Query Frame = 0


Query: 53  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNS 112
           E     +ASG+FYNWAMK + S+ LF+ ++NTIEYSGDA SSPA+Y QKLD+IRR+ GNS
Sbjct: 350 ERKLGSAASGMFYNWAMKRDGSIPLFMNDYNTIEYSGDAASSPAKYLQKLDSIRRYSGNS 409

Query: 113 GGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQNQVQFLK 166
           GGRF IGLESHFG SPNIPYMRS I+TLGS G+PIWLTEVDV N  NQ Q L+
Sbjct: 410 GGRFAIGLESHFGPSPNIPYMRSAIDTLGSAGVPIWLTEVDVSNSPNQAQDLE 462

[Close]

BLAST of HG10018706 vs. NCBI nr
Match: KAG7011604.1 (rsgI6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 166.0 bits (419), Expect = 3.0e-37
Identity = 78/109 (71.56%), Postives = 90/109 (82.57%), Query Frame = 0


Query: 53  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNS 112
           E     +ASG+FYNWAMK + S+ LF+ ++NTIEYSGDA SSPA+Y QKLD+IRR+ GNS
Sbjct: 308 ERKLGSAASGMFYNWAMKRDGSIPLFMNDYNTIEYSGDAASSPAKYLQKLDSIRRYSGNS 367

Query: 113 GGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQNQV 162
           GGRF IGLESHFG SPNIPYMRS I+TLGS G+PIWLTEVDV N  NQV
Sbjct: 368 GGRFAIGLESHFGPSPNIPYMRSAIDTLGSAGVPIWLTEVDVSNSPNQV 416

[Close]

BLAST of HG10018706 vs. ExPASy Swiss-Prot
Match: Q680B7 (Endo-1,4-beta-xylanase 4 OS=Arabidopsis thaliana OX=3702 GN=XYN4 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 4.9e-19
Identity = 44/108 (40.74%), Postives = 70/108 (64.81%), Query Frame = 0


Query: 59  SASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVI 118
           +AS + Y+ A K++  + LFL EFNT+EY  D + SP    +K+  I  F GN+  +  I
Sbjct: 339 NASAIVYSLASKLDPDIPLFLNEFNTVEYDKDRVVSPVNVVKKMQEIVSFPGNNNIKGGI 398

Query: 119 GLESHFG-LSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQNQVQFLK 166
           G + HF  + PN+ YMR  ++TLGS+  P+WLTEVD++   +QV++++
Sbjct: 399 GAQGHFAPVQPNLAYMRYALDTLGSLSFPVWLTEVDMFKCPDQVKYME 446

[Close]

BLAST of HG10018706 vs. ExPASy Swiss-Prot
Match: Q84WT5 (Endo-1,4-beta-xylanase 5-like OS=Arabidopsis thaliana OX=3702 GN=At4g33820 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-18
Identity = 46/114 (40.35%), Postives = 73/114 (64.04%), Query Frame = 0


Query: 53  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNS 112
           E+    +AS  FYN A K++  V LF+ E+NTIE + +  ++P +  + ++ I  + GN 
Sbjct: 340 EKMLGANASTSFYNLAFKIDPDVRLFVNEYNTIENTKEFTATPIKVKKMMEEILAYPGNK 399

Query: 113 GGRFVIGLESHFG-LSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQNQVQFLK 166
             +  IG + HFG   PN+ Y+RS ++TLGS+G+PIWLTEVD+    NQ Q+++
Sbjct: 400 NMKGAIGAQGHFGPTQPNLAYIRSALDTLGSLGLPIWLTEVDMPKCPNQAQYVE 453

[Close]

BLAST of HG10018706 vs. ExPASy Swiss-Prot
Match: A0A1P8B8F8 (Endo-1,4-beta-xylanase 5 OS=Arabidopsis thaliana OX=3702 GN=XYN5 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.4e-18
Identity = 46/114 (40.35%), Postives = 72/114 (63.16%), Query Frame = 0


Query: 53  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNS 112
           E+    +AS  FYN A K++  VT+F+ E+NTIE   +  ++P +  +K++ I  + GN 
Sbjct: 340 EKMLGANASSSFYNLAFKLDPDVTMFVNEYNTIENRVEVTATPVKVKEKMEEILAYPGNM 399

Query: 113 GGRFVIGLESHF-GLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQNQVQFLK 166
             +  IG + HF    PN+ YMRS ++TLGS+G+PIWLTEVD+    NQ  +++
Sbjct: 400 NIKGAIGAQGHFRPTQPNLAYMRSALDTLGSLGLPIWLTEVDMPKCPNQEVYIE 453

[Close]

BLAST of HG10018706 vs. ExPASy Swiss-Prot
Match: O80596 (Endo-1,4-beta-xylanase 2 OS=Arabidopsis thaliana OX=3702 GN=XYN2 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 8.2e-06
Identity = 31/98 (31.63%), Postives = 56/98 (57.14%), Query Frame = 0


Query: 65  YNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHF 124
           +  A +++   TLFL E++ IE   D+ SSP +Y + +  +++     GG   IG++ H 
Sbjct: 860 FKTAHELDPLATLFLNEYH-IEDGFDSRSSPEKYIKLVHKLQKKGAPVGG---IGIQGHI 919

Query: 125 GLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQNQVQ 163
             SP    +RS ++ L ++G+PIW TE+DV +    ++
Sbjct: 920 -TSPVGHIVRSALDKLSTLGLPIWFTELDVSSTNEHIR 952

[Close]

BLAST of HG10018706 vs. ExPASy Swiss-Prot
Match: A0A1P8AWH8 (Endo-1,4-beta-xylanase 1 OS=Arabidopsis thaliana OX=3702 GN=XYN1 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 3.1e-05
Identity = 30/98 (30.61%), Postives = 56/98 (57.14%), Query Frame = 0


Query: 65  YNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIGLESHF 124
           +  A +++ S TLF+ +++ IE   D  S P +Y +++  ++      GG   IG++ H 
Sbjct: 738 FKTAHQLDPSATLFVNDYH-IEDGCDPKSCPEKYTEQILDLQEKGAPVGG---IGIQGHI 797

Query: 125 GLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQNQVQ 163
             SP  P + S ++ LG +G+PIW TE+DV ++   ++
Sbjct: 798 D-SPVGPIVCSALDKLGILGLPIWFTELDVSSVNEHIR 830

[Close]

BLAST of HG10018706 vs. ExPASy TrEMBL
Match: A0A6J1GMR3 (uncharacterized protein LOC111455386 OS=Cucurbita moschata OX=3662 GN=LOC111455386 PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 8.4e-38
Identity = 79/113 (69.91%), Postives = 92/113 (81.42%), Query Frame = 0


Query: 53  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNS 112
           E     +ASG+FYNWAMK + S+ LF+ ++NTIEYSGDA SSPA+Y QKLD+IRR+ GNS
Sbjct: 350 ERKLGSAASGMFYNWAMKRDGSIPLFMNDYNTIEYSGDAASSPAKYLQKLDSIRRYSGNS 409

Query: 113 GGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQNQVQFLK 166
           GGRF IGLESHFG SPNIPYMRS I+TLGS G+PIWLTEVDV N  NQ Q L+
Sbjct: 410 GGRFAIGLESHFGPSPNIPYMRSAIDTLGSAGVPIWLTEVDVSNSPNQAQDLE 462

[Close]

BLAST of HG10018706 vs. ExPASy TrEMBL
Match: A0A0A0K6B7 (GH10 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071360 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 7.1e-37
Identity = 80/106 (75.47%), Postives = 86/106 (81.13%), Query Frame = 0


Query: 60  ASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIG 119
           ASGLFYNWAMK +QS+ LFL EFNTIE SGDA SSPARY QKLD IR+F GN GGRF IG
Sbjct: 361 ASGLFYNWAMKADQSIPLFLNEFNTIESSGDAASSPARYLQKLDTIRKFPGNRGGRFAIG 420

Query: 120 LESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQNQVQFLK 166
           LESHFG SPNI YMRS I+TLGS G+PIWLTEVDV N  NQ   L+
Sbjct: 421 LESHFGPSPNIAYMRSAIDTLGSAGVPIWLTEVDVSNSANQAYNLE 466

[Close]

BLAST of HG10018706 vs. ExPASy TrEMBL
Match: A0A6J1I4U7 (uncharacterized protein LOC111471011 OS=Cucurbita maxima OX=3661 GN=LOC111471011 PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 2.1e-36
Identity = 77/113 (68.14%), Postives = 90/113 (79.65%), Query Frame = 0


Query: 53  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNS 112
           E     +ASG+FYNWAMK + S+ LF+ E+NTIE SGDA SSPA+Y QKLD+IR + GNS
Sbjct: 350 ERKLGSAASGMFYNWAMKRDGSIPLFMNEYNTIENSGDAASSPAKYLQKLDSIRHYSGNS 409

Query: 113 GGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQNQVQFLK 166
           GGRF IGLESHFG SPNIPYMRS I+TLGS G+PIWLTE+DV N  NQ Q L+
Sbjct: 410 GGRFAIGLESHFGPSPNIPYMRSAIDTLGSAGVPIWLTEIDVSNSPNQAQDLE 462

[Close]

BLAST of HG10018706 vs. ExPASy TrEMBL
Match: A0A5D3C4I2 (Endoxylanase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001250 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 3.5e-36
Identity = 79/106 (74.53%), Postives = 86/106 (81.13%), Query Frame = 0


Query: 60  ASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIG 119
           ASGLFYNWAMK +QS+ LFL EFNTIE SGDA SSPARY QKLDAIR+F GNS  RF IG
Sbjct: 361 ASGLFYNWAMKADQSIPLFLNEFNTIESSGDAASSPARYLQKLDAIRKFPGNSDARFAIG 420

Query: 120 LESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQNQVQFLK 166
           LESHFG SPN+ YMRS I+TLGS G+PIWLTEVDV N  NQ   L+
Sbjct: 421 LESHFGPSPNLAYMRSAIDTLGSAGVPIWLTEVDVSNSANQAYDLE 466

[Close]

BLAST of HG10018706 vs. ExPASy TrEMBL
Match: A0A1S3C1U4 (uncharacterized protein LOC103495673 OS=Cucumis melo OX=3656 GN=LOC103495673 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 3.5e-36
Identity = 79/106 (74.53%), Postives = 86/106 (81.13%), Query Frame = 0


Query: 60  ASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVIG 119
           ASGLFYNWAMK +QS+ LFL EFNTIE SGDA SSPARY QKLDAIR+F GNS  RF IG
Sbjct: 359 ASGLFYNWAMKADQSIPLFLNEFNTIESSGDAASSPARYLQKLDAIRKFPGNSDARFAIG 418

Query: 120 LESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQNQVQFLK 166
           LESHFG SPN+ YMRS I+TLGS G+PIWLTEVDV N  NQ   L+
Sbjct: 419 LESHFGPSPNLAYMRSAIDTLGSAGVPIWLTEVDVSNSANQAYDLE 464

[Close]

BLAST of HG10018706 vs. TAIR 10
Match: AT2G14690.1 (Glycosyl hydrolase superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 3.5e-20
Identity = 44/108 (40.74%), Postives = 70/108 (64.81%), Query Frame = 0


Query: 59  SASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVI 118
           +AS + Y+ A K++  + LFL EFNT+EY  D + SP    +K+  I  F GN+  +  I
Sbjct: 339 NASAIVYSLASKLDPDIPLFLNEFNTVEYDKDRVVSPVNVVKKMQEIVSFPGNNNIKGGI 398

Query: 119 GLESHFG-LSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQNQVQFLK 166
           G + HF  + PN+ YMR  ++TLGS+  P+WLTEVD++   +QV++++
Sbjct: 399 GAQGHFAPVQPNLAYMRYALDTLGSLSFPVWLTEVDMFKCPDQVKYME 446

[Close]

BLAST of HG10018706 vs. TAIR 10
Match: AT4G33820.1 (Glycosyl hydrolase superfamily protein )

HSP 1 Score: 94.7 bits (234), Expect = 7.8e-20
Identity = 46/114 (40.35%), Postives = 73/114 (64.04%), Query Frame = 0


Query: 53  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNS 112
           E+    +AS  FYN A K++  V LF+ E+NTIE + +  ++P +  + ++ I  + GN 
Sbjct: 340 EKMLGANASTSFYNLAFKIDPDVRLFVNEYNTIENTKEFTATPIKVKKMMEEILAYPGNK 399

Query: 113 GGRFVIGLESHFG-LSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQNQVQFLK 166
             +  IG + HFG   PN+ Y+RS ++TLGS+G+PIWLTEVD+    NQ Q+++
Sbjct: 400 NMKGAIGAQGHFGPTQPNLAYIRSALDTLGSLGLPIWLTEVDMPKCPNQAQYVE 453

[Close]

BLAST of HG10018706 vs. TAIR 10
Match: AT4G33810.1 (Glycosyl hydrolase superfamily protein )

HSP 1 Score: 93.6 bits (231), Expect = 1.7e-19
Identity = 46/114 (40.35%), Postives = 72/114 (63.16%), Query Frame = 0


Query: 53  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNS 112
           E+    +AS  FYN A K++  VT+F+ E+NTIE   +  ++P +  +K++ I  + GN 
Sbjct: 300 EKMLGANASSSFYNLAFKLDPDVTMFVNEYNTIENRVEVTATPVKVKEKMEEILAYPGNM 359

Query: 113 GGRFVIGLESHF-GLSPNIPYMRSTINTLGSVGIPIWLTEVDVYNLQNQVQFLK 166
             +  IG + HF    PN+ YMRS ++TLGS+G+PIWLTEVD+    NQ  +++
Sbjct: 360 NIKGAIGAQGHFRPTQPNLAYMRSALDTLGSLGLPIWLTEVDMPKCPNQEVYIE 413

[Close]

BLAST of HG10018706 vs. TAIR 10
Match: AT4G33860.1 (Glycosyl hydrolase family 10 protein )

HSP 1 Score: 90.1 bits (222), Expect = 1.9e-18
Identity = 52/104 (50.00%), Postives = 66/104 (63.46%), Query Frame = 0


Query: 53  EESTRRSASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIR--RFLG 112
           E+     AS   +  A   + + T+F+ E+NT+E S D+ SS ARY QKL  IR  R  G
Sbjct: 349 EDKMGPKASYNIFKMAQAFDPTTTMFMNEYNTLEESSDSDSSLARYLQKLREIRSIRVCG 408

Query: 113 NSGGRFVIGLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDV 155
           N      IGLESHF  +PNIPYMRS ++TL + G+PIWLTEVDV
Sbjct: 409 NIS--LGIGLESHF-KTPNIPYMRSALDTLAATGLPIWLTEVDV 449

[Close]

BLAST of HG10018706 vs. TAIR 10
Match: AT4G33830.1 (Glycosyl hydrolase family 10 protein )

HSP 1 Score: 87.4 bits (215), Expect = 1.2e-17
Identity = 44/96 (45.83%), Postives = 62/96 (64.58%), Query Frame = 0


Query: 59  SASGLFYNWAMKVNQSVTLFLYEFNTIEYSGDAISSPARYFQKLDAIRRFLGNSGGRFVI 118
           +AS   +  A  ++ S T+F+ EF T+E   D  +SPA+Y +KL  ++           I
Sbjct: 356 NASNNIFAMAHAIDPSTTMFMNEFYTLEDPTDLKASPAKYLEKLRELQSIRVRGNIPLGI 415

Query: 119 GLESHFGLSPNIPYMRSTINTLGSVGIPIWLTEVDV 155
           GLESHF  +PNIPYMRS ++TLG+ G+PIWLTE+DV
Sbjct: 416 GLESHFS-TPNIPYMRSALDTLGATGLPIWLTEIDV 450

The following BLAST results are available for this feature:

BLAST of HG10018706 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887131.1	1.4e-39	79.25	endo-1,4-beta-xylanase 5-like [Benincasa hispida]	[more]
XP_023553798.1	1.3e-37	69.91	uncharacterized protein LOC111811263 [Cucurbita pepo subsp. pepo]	[more]
KAG6571918.1	1.7e-37	69.91	Endo-1,4-beta-xylanase 5-like protein, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022952795.1	1.7e-37	69.91	uncharacterized protein LOC111455386 [Cucurbita moschata]	[more]
KAG7011604.1	3.0e-37	71.56	rsgI6, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of HG10018706 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q680B7	4.9e-19	40.74	Endo-1,4-beta-xylanase 4 OS=Arabidopsis thaliana OX=3702 GN=XYN4 PE=2 SV=1	[more]
Q84WT5	1.1e-18	40.35	Endo-1,4-beta-xylanase 5-like OS=Arabidopsis thaliana OX=3702 GN=At4g33820 PE=2 ...	[more]
A0A1P8B8F8	2.4e-18	40.35	Endo-1,4-beta-xylanase 5 OS=Arabidopsis thaliana OX=3702 GN=XYN5 PE=3 SV=1	[more]
O80596	8.2e-06	31.63	Endo-1,4-beta-xylanase 2 OS=Arabidopsis thaliana OX=3702 GN=XYN2 PE=3 SV=1	[more]
A0A1P8AWH8	3.1e-05	30.61	Endo-1,4-beta-xylanase 1 OS=Arabidopsis thaliana OX=3702 GN=XYN1 PE=1 SV=1	[more]

BLAST of HG10018706 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GMR3	8.4e-38	69.91	uncharacterized protein LOC111455386 OS=Cucurbita moschata OX=3662 GN=LOC1114553...	[more]
A0A0A0K6B7	7.1e-37	75.47	GH10 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071360 PE=3 S...	[more]
A0A6J1I4U7	2.1e-36	68.14	uncharacterized protein LOC111471011 OS=Cucurbita maxima OX=3661 GN=LOC111471011...	[more]
A0A5D3C4I2	3.5e-36	74.53	Endoxylanase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001250 P...	[more]
A0A1S3C1U4	3.5e-36	74.53	uncharacterized protein LOC103495673 OS=Cucumis melo OX=3656 GN=LOC103495673 PE=...	[more]

BLAST of HG10018706 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G14690.1	3.5e-20	40.74	Glycosyl hydrolase superfamily protein	[more]
AT4G33820.1	7.8e-20	40.35	Glycosyl hydrolase superfamily protein	[more]
AT4G33810.1	1.7e-19	40.35	Glycosyl hydrolase superfamily protein	[more]
AT4G33860.1	1.9e-18	50.00	Glycosyl hydrolase family 10 protein	[more]
AT4G33830.1	1.2e-17	45.83	Glycosyl hydrolase family 10 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 48..172 e-value: 2.8E-11 score: 44.9
None	No IPR available	PANTHER	PTHR31490:SF52	ENDO-1,4-BETA-XYLANASE 5-RELATED	coord: 58..164
IPR044846	Glycoside hydrolase family 10	PANTHER	PTHR31490	GLYCOSYL HYDROLASE	coord: 58..164
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 60..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10018706.1	HG10018706.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045493	xylan catabolic process
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds