Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACCTCAAGAAAACTTCAGCTTCCAACCCATCAATGGCGGCTCCACCCCCATTACTGAATCACCTCCTCTCTTTAGCCTGGCACCAAAATCAATTGACCACCATGAGAAAGAAGACCATGGCTATGGAAATGTCGATTGTTGTTTGGAAAAAAGAAGAAATGGAGCTCATAGAAAGAGCAATTCTTGCTCCGGGGATAGCAGAAGGACTAATGAGATAGCAATTGATAGCGATGGTGATGAAGATGAGAGGATGGATATGCTGTGGGAAGATTTCAATGAAGAATTGCTGCTGAAAAATTTGAGTTCCAGATTTGGGTCTGATAGGTTGCCGGAACTTGAAGACTTAGAGTCGGAGGAAGCAACGGAAGACGGTGGCAGCGGGGCATTGCTGTCGGCAAGGATGGCGAGTGTGGTAGTGATAATGAAGGTGCTGAAGAAGCTCCTGTTTCTGCATAGCTTTCGCAGGAAGCTCAAAGCTCGGACTTGGTGA
mRNA sequence
ATGGAACCTCAAGAAAACTTCAGCTTCCAACCCATCAATGGCGGCTCCACCCCCATTACTGAATCACCTCCTCTCTTTAGCCTGGCACCAAAATCAATTGACCACCATGAGAAAGAAGACCATGGCTATGGAAATGTCGATTGTTGTTTGGAAAAAAGAAGAAATGGAGCTCATAGAAAGAGCAATTCTTGCTCCGGGGATAGCAGAAGGACTAATGAGATAGCAATTGATAGCGATGGTGATGAAGATGAGAGGATGGATATGCTGTGGGAAGATTTCAATGAAGAATTGCTGCTGAAAAATTTGAGTTCCAGATTTGGGTCTGATAGGTTGCCGGAACTTGAAGACTTAGAGTCGGAGGAAGCAACGGAAGACGGTGGCAGCGGGGCATTGCTGTCGGCAAGGATGGCGAGTGTGGTAGTGATAATGAAGGTGCTGAAGAAGCTCCTGTTTCTGCATAGCTTTCGCAGGAAGCTCAAAGCTCGGACTTGGTGA
Coding sequence (CDS)
ATGGAACCTCAAGAAAACTTCAGCTTCCAACCCATCAATGGCGGCTCCACCCCCATTACTGAATCACCTCCTCTCTTTAGCCTGGCACCAAAATCAATTGACCACCATGAGAAAGAAGACCATGGCTATGGAAATGTCGATTGTTGTTTGGAAAAAAGAAGAAATGGAGCTCATAGAAAGAGCAATTCTTGCTCCGGGGATAGCAGAAGGACTAATGAGATAGCAATTGATAGCGATGGTGATGAAGATGAGAGGATGGATATGCTGTGGGAAGATTTCAATGAAGAATTGCTGCTGAAAAATTTGAGTTCCAGATTTGGGTCTGATAGGTTGCCGGAACTTGAAGACTTAGAGTCGGAGGAAGCAACGGAAGACGGTGGCAGCGGGGCATTGCTGTCGGCAAGGATGGCGAGTGTGGTAGTGATAATGAAGGTGCTGAAGAAGCTCCTGTTTCTGCATAGCTTTCGCAGGAAGCTCAAAGCTCGGACTTGGTGA
Protein sequence
MEPQENFSFQPINGGSTPITESPPLFSLAPKSIDHHEKEDHGYGNVDCCLEKRRNGAHRKSNSCSGDSRRTNEIAIDSDGDEDERMDMLWEDFNEELLLKNLSSRFGSDRLPELEDLESEEATEDGGSGALLSARMASVVVIMKVLKKLLFLHSFRRKLKARTW
Homology
BLAST of HG10018565 vs. NCBI nr
Match:
XP_011650206.1 (uncharacterized protein LOC105434762 [Cucumis sativus] >KGN63099.1 hypothetical protein Csa_022432 [Cucumis sativus])
HSP 1 Score: 255.0 bits (650), Expect = 4.4e-64
Identity = 139/165 (84.24%), Postives = 146/165 (88.48%), Query Frame = 0
Query: 1 MEPQENFSFQPINGGSTPITESPPLFSLAPKSIDHHEKEDHGYGNVDCCLEKRRNGAHRK 60
ME QENFSFQPINGGSTPITESPP LA +SIDHHEKED GNVDC E R NG HRK
Sbjct: 1 MEAQENFSFQPINGGSTPITESPP---LASESIDHHEKEDQSDGNVDCSSEIRSNGCHRK 60
Query: 61 SNSCSGDSRRTNEIAIDSDGDEDERMDMLWEDFNEELLLKNLSSRFGSDRLPELEDLESE 120
SNSCSGDSRRTNEIAI+SD +EDE+MDMLWEDFNEE LLKNLSSRFGS RLPEL+DLESE
Sbjct: 61 SNSCSGDSRRTNEIAINSDDEEDEKMDMLWEDFNEE-LLKNLSSRFGSRRLPELDDLESE 120
Query: 121 EATEDG-GSGALLSARMASVVVIMKVLKKLLFLHSFRRKLKARTW 165
EA EDG SGA+LSARMASVVVIMKVLKKLLFLH+FRRKLKARTW
Sbjct: 121 EAMEDGSSSGAMLSARMASVVVIMKVLKKLLFLHNFRRKLKARTW 161
BLAST of HG10018565 vs. NCBI nr
Match:
XP_008441623.1 (PREDICTED: uncharacterized protein LOC103485703 [Cucumis melo] >KAA0037012.1 uncharacterized protein E6C27_scaffold86G00980 [Cucumis melo var. makuwa] >TYK06638.1 uncharacterized protein E5676_scaffold453G001160 [Cucumis melo var. makuwa])
HSP 1 Score: 251.1 bits (640), Expect = 6.4e-63
Identity = 136/165 (82.42%), Postives = 143/165 (86.67%), Query Frame = 0
Query: 1 MEPQENFSFQPINGGSTPITESPPLFSLAPKSIDHHEKEDHGYGNVDCCLEKRRNGAHRK 60
ME QENF FQPING STPITESPP LA KSIDHHEKED GN+DC E R NG HRK
Sbjct: 1 MEAQENFGFQPINGSSTPITESPP---LASKSIDHHEKEDQSDGNIDCSSEIRSNGGHRK 60
Query: 61 SNSCSGDSRRTNEIAIDSDGDEDERMDMLWEDFNEELLLKNLSSRFGSDRLPELEDLESE 120
NSCSGDSRRTNEIAIDSD +EDE+MDMLWEDFNEE L+KNLSSRFGS RLPEL+DLESE
Sbjct: 61 INSCSGDSRRTNEIAIDSDDEEDEKMDMLWEDFNEE-LMKNLSSRFGSRRLPELDDLESE 120
Query: 121 EATEDG-GSGALLSARMASVVVIMKVLKKLLFLHSFRRKLKARTW 165
EA EDG SGA+LSARMASVVVIMKVLKKLLFLH+FRRKLKARTW
Sbjct: 121 EAMEDGSSSGAMLSARMASVVVIMKVLKKLLFLHNFRRKLKARTW 161
BLAST of HG10018565 vs. NCBI nr
Match:
XP_022152473.1 (uncharacterized protein LOC111020194 [Momordica charantia])
HSP 1 Score: 189.9 bits (481), Expect = 1.8e-44
Identity = 113/167 (67.66%), Postives = 125/167 (74.85%), Query Frame = 0
Query: 1 MEPQENFSFQPINGGSTPITESPPLFSL--APKSIDHHEKEDHGYGNVDCC-LEKRRNGA 60
M +E FSF +G S+PITESPPL+ L +PKSIDH HGYGN+DC EKR G
Sbjct: 1 MAAREGFSFPSFHGSSSPITESPPLWCLSSSPKSIDH-----HGYGNIDCSEAEKRSYGG 60
Query: 61 HRKSNSCSGDSRRTNEIAIDSDGDEDERMDMLWEDFNEELLLKNLSSRFGSDRLPELEDL 120
HRK NSC+ D RR E IDSD +EDE+MD+LWEDFNEE LL NLSSRFGS R+PELE L
Sbjct: 61 HRKVNSCNLDVRRARERVIDSDEEEDEKMDVLWEDFNEE-LLNNLSSRFGSGRVPELEYL 120
Query: 121 ESEEATEDGGSGALLSARMASVVVIMKVLKKLLFLHSFRRKLKARTW 165
+SEE ALLSARMASVVVIMKVLKKLLFLHSFRRK KARTW
Sbjct: 121 KSEEPK------ALLSARMASVVVIMKVLKKLLFLHSFRRKPKARTW 155
BLAST of HG10018565 vs. NCBI nr
Match:
XP_022939117.1 (uncharacterized protein LOC111445118 [Cucurbita moschata] >KAG6578325.1 hypothetical protein SDJN03_22773, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015903.1 hypothetical protein SDJN02_21006, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 174.1 bits (440), Expect = 1.0e-39
Identity = 107/168 (63.69%), Postives = 119/168 (70.83%), Query Frame = 0
Query: 1 MEPQENFSFQPINGGSTPITESPPLFSLAPKSIDHHEKEDHGYGNVDCCLEKRRNGAHRK 60
ME E+FSFQPINGG+TPIT SPPL+ L K + HEKED G NV EKRRN
Sbjct: 1 MEAPEDFSFQPINGGTTPITGSPPLWGLPQKPMGRHEKEDGGCRNVGSS-EKRRN----- 60
Query: 61 SNSCSGDSRRTNEIAIDSDGDEDERMDMLWEDFNEELLLKNLSSRFGSDRLPELEDLESE 120
DSD +EDE+MD+LWEDFNEE LLKNLSSR+GS RLPELE ES+
Sbjct: 61 ----------------DSDEEEDEKMDVLWEDFNEE-LLKNLSSRYGSGRLPELEYSESK 120
Query: 121 EATEDGG-----SGALLSARMASVVVIMKVLKKLLFLHSFRRKLKART 164
EA +DGG SGALLSARMA VVV+MKVLKK+LFLHSFRRKLKART
Sbjct: 121 EAKKDGGGRGGSSGALLSARMAGVVVMMKVLKKILFLHSFRRKLKART 145
BLAST of HG10018565 vs. NCBI nr
Match:
XP_022993375.1 (uncharacterized protein LOC111489418 [Cucurbita maxima])
HSP 1 Score: 167.9 bits (424), Expect = 7.1e-38
Identity = 107/168 (63.69%), Postives = 118/168 (70.24%), Query Frame = 0
Query: 1 MEPQENFSFQPINGGSTPITESPPLFSLAPKSIDHHEKEDHGYGNVDCCLEKRRNGAHRK 60
ME E+FSFQPIN GSTPI SPPL+ L K +D HEKED G NV EKRRN
Sbjct: 1 MEAPEDFSFQPIN-GSTPIAGSPPLWGLPQKPMDLHEKEDGGCRNVGSS-EKRRN----- 60
Query: 61 SNSCSGDSRRTNEIAIDSDGDEDERMDMLWEDFNEELLLKNLSSRFGSDRLPELEDLESE 120
DSD +EDE+MD+LWEDFNEE LLKNLSSR+GS RLPELE ES+
Sbjct: 61 ----------------DSDEEEDEKMDVLWEDFNEE-LLKNLSSRYGSGRLPELEYSESK 120
Query: 121 EATEDGG-----SGALLSARMASVVVIMKVLKKLLFLHSFRRKLKART 164
EA +DGG SGALLSARMA VVV+MKVLKK+LFLHSFRRKLKART
Sbjct: 121 EAKKDGGGRGGSSGALLSARMAGVVVMMKVLKKILFLHSFRRKLKART 144
BLAST of HG10018565 vs. ExPASy TrEMBL
Match:
A0A0A0LQ09 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G402070 PE=4 SV=1)
HSP 1 Score: 255.0 bits (650), Expect = 2.2e-64
Identity = 139/165 (84.24%), Postives = 146/165 (88.48%), Query Frame = 0
Query: 1 MEPQENFSFQPINGGSTPITESPPLFSLAPKSIDHHEKEDHGYGNVDCCLEKRRNGAHRK 60
ME QENFSFQPINGGSTPITESPP LA +SIDHHEKED GNVDC E R NG HRK
Sbjct: 1 MEAQENFSFQPINGGSTPITESPP---LASESIDHHEKEDQSDGNVDCSSEIRSNGCHRK 60
Query: 61 SNSCSGDSRRTNEIAIDSDGDEDERMDMLWEDFNEELLLKNLSSRFGSDRLPELEDLESE 120
SNSCSGDSRRTNEIAI+SD +EDE+MDMLWEDFNEE LLKNLSSRFGS RLPEL+DLESE
Sbjct: 61 SNSCSGDSRRTNEIAINSDDEEDEKMDMLWEDFNEE-LLKNLSSRFGSRRLPELDDLESE 120
Query: 121 EATEDG-GSGALLSARMASVVVIMKVLKKLLFLHSFRRKLKARTW 165
EA EDG SGA+LSARMASVVVIMKVLKKLLFLH+FRRKLKARTW
Sbjct: 121 EAMEDGSSSGAMLSARMASVVVIMKVLKKLLFLHNFRRKLKARTW 161
BLAST of HG10018565 vs. ExPASy TrEMBL
Match:
A0A5D3C651 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001160 PE=4 SV=1)
HSP 1 Score: 251.1 bits (640), Expect = 3.1e-63
Identity = 136/165 (82.42%), Postives = 143/165 (86.67%), Query Frame = 0
Query: 1 MEPQENFSFQPINGGSTPITESPPLFSLAPKSIDHHEKEDHGYGNVDCCLEKRRNGAHRK 60
ME QENF FQPING STPITESPP LA KSIDHHEKED GN+DC E R NG HRK
Sbjct: 1 MEAQENFGFQPINGSSTPITESPP---LASKSIDHHEKEDQSDGNIDCSSEIRSNGGHRK 60
Query: 61 SNSCSGDSRRTNEIAIDSDGDEDERMDMLWEDFNEELLLKNLSSRFGSDRLPELEDLESE 120
NSCSGDSRRTNEIAIDSD +EDE+MDMLWEDFNEE L+KNLSSRFGS RLPEL+DLESE
Sbjct: 61 INSCSGDSRRTNEIAIDSDDEEDEKMDMLWEDFNEE-LMKNLSSRFGSRRLPELDDLESE 120
Query: 121 EATEDG-GSGALLSARMASVVVIMKVLKKLLFLHSFRRKLKARTW 165
EA EDG SGA+LSARMASVVVIMKVLKKLLFLH+FRRKLKARTW
Sbjct: 121 EAMEDGSSSGAMLSARMASVVVIMKVLKKLLFLHNFRRKLKARTW 161
BLAST of HG10018565 vs. ExPASy TrEMBL
Match:
A0A1S3B3U6 (uncharacterized protein LOC103485703 OS=Cucumis melo OX=3656 GN=LOC103485703 PE=4 SV=1)
HSP 1 Score: 251.1 bits (640), Expect = 3.1e-63
Identity = 136/165 (82.42%), Postives = 143/165 (86.67%), Query Frame = 0
Query: 1 MEPQENFSFQPINGGSTPITESPPLFSLAPKSIDHHEKEDHGYGNVDCCLEKRRNGAHRK 60
ME QENF FQPING STPITESPP LA KSIDHHEKED GN+DC E R NG HRK
Sbjct: 1 MEAQENFGFQPINGSSTPITESPP---LASKSIDHHEKEDQSDGNIDCSSEIRSNGGHRK 60
Query: 61 SNSCSGDSRRTNEIAIDSDGDEDERMDMLWEDFNEELLLKNLSSRFGSDRLPELEDLESE 120
NSCSGDSRRTNEIAIDSD +EDE+MDMLWEDFNEE L+KNLSSRFGS RLPEL+DLESE
Sbjct: 61 INSCSGDSRRTNEIAIDSDDEEDEKMDMLWEDFNEE-LMKNLSSRFGSRRLPELDDLESE 120
Query: 121 EATEDG-GSGALLSARMASVVVIMKVLKKLLFLHSFRRKLKARTW 165
EA EDG SGA+LSARMASVVVIMKVLKKLLFLH+FRRKLKARTW
Sbjct: 121 EAMEDGSSSGAMLSARMASVVVIMKVLKKLLFLHNFRRKLKARTW 161
BLAST of HG10018565 vs. ExPASy TrEMBL
Match:
A0A6J1DEY5 (uncharacterized protein LOC111020194 OS=Momordica charantia OX=3673 GN=LOC111020194 PE=4 SV=1)
HSP 1 Score: 189.9 bits (481), Expect = 8.5e-45
Identity = 113/167 (67.66%), Postives = 125/167 (74.85%), Query Frame = 0
Query: 1 MEPQENFSFQPINGGSTPITESPPLFSL--APKSIDHHEKEDHGYGNVDCC-LEKRRNGA 60
M +E FSF +G S+PITESPPL+ L +PKSIDH HGYGN+DC EKR G
Sbjct: 1 MAAREGFSFPSFHGSSSPITESPPLWCLSSSPKSIDH-----HGYGNIDCSEAEKRSYGG 60
Query: 61 HRKSNSCSGDSRRTNEIAIDSDGDEDERMDMLWEDFNEELLLKNLSSRFGSDRLPELEDL 120
HRK NSC+ D RR E IDSD +EDE+MD+LWEDFNEE LL NLSSRFGS R+PELE L
Sbjct: 61 HRKVNSCNLDVRRARERVIDSDEEEDEKMDVLWEDFNEE-LLNNLSSRFGSGRVPELEYL 120
Query: 121 ESEEATEDGGSGALLSARMASVVVIMKVLKKLLFLHSFRRKLKARTW 165
+SEE ALLSARMASVVVIMKVLKKLLFLHSFRRK KARTW
Sbjct: 121 KSEEPK------ALLSARMASVVVIMKVLKKLLFLHSFRRKPKARTW 155
BLAST of HG10018565 vs. ExPASy TrEMBL
Match:
A0A6J1FFX5 (uncharacterized protein LOC111445118 OS=Cucurbita moschata OX=3662 GN=LOC111445118 PE=4 SV=1)
HSP 1 Score: 174.1 bits (440), Expect = 4.8e-40
Identity = 107/168 (63.69%), Postives = 119/168 (70.83%), Query Frame = 0
Query: 1 MEPQENFSFQPINGGSTPITESPPLFSLAPKSIDHHEKEDHGYGNVDCCLEKRRNGAHRK 60
ME E+FSFQPINGG+TPIT SPPL+ L K + HEKED G NV EKRRN
Sbjct: 1 MEAPEDFSFQPINGGTTPITGSPPLWGLPQKPMGRHEKEDGGCRNVGSS-EKRRN----- 60
Query: 61 SNSCSGDSRRTNEIAIDSDGDEDERMDMLWEDFNEELLLKNLSSRFGSDRLPELEDLESE 120
DSD +EDE+MD+LWEDFNEE LLKNLSSR+GS RLPELE ES+
Sbjct: 61 ----------------DSDEEEDEKMDVLWEDFNEE-LLKNLSSRYGSGRLPELEYSESK 120
Query: 121 EATEDGG-----SGALLSARMASVVVIMKVLKKLLFLHSFRRKLKART 164
EA +DGG SGALLSARMA VVV+MKVLKK+LFLHSFRRKLKART
Sbjct: 121 EAKKDGGGRGGSSGALLSARMAGVVVMMKVLKKILFLHSFRRKLKART 145
BLAST of HG10018565 vs. TAIR 10
Match:
AT1G71910.1 (unknown protein; Has 28 Blast hits to 28 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 48.1 bits (113), Expect = 7.7e-06
Identity = 49/151 (32.45%), Postives = 78/151 (51.66%), Query Frame = 0
Query: 21 ESPPLFSLAPKSIDHHEKEDHGYGNVDCCLEKRRNGAHRKSNSCSGDSRRTNEIAIDSDG 80
+SPPL+ +P + ++D+ +G + K +G H + S S R+ I D
Sbjct: 28 DSPPLWKHSP--VTSFRRKDYDFGLARLVIGK--DGDHDQRKSFSYVEMRSRWI----DD 87
Query: 81 DEDERMDMLWEDFNEELLLKNLSSRF--GSDRLPELEDLESEEATEDG-GSGALLSARM- 140
E+E+MDMLWED NEEL ++ S R G D + L +E++ G G LS +
Sbjct: 88 KEEEKMDMLWEDLNEELPPRSQSLRIVHGGDGGEKKTALFPDESSAVAVGCGMKLSKKTK 147
Query: 141 ----ASVVVIMKVLKKLLFLHSFRRKLKART 164
+V+V+M+VLKKL+ L S ++ +T
Sbjct: 148 KKTNLNVLVLMRVLKKLIVLRSSSQRSPVKT 170
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_011650206.1 | 4.4e-64 | 84.24 | uncharacterized protein LOC105434762 [Cucumis sativus] >KGN63099.1 hypothetical ... | [more] |
XP_008441623.1 | 6.4e-63 | 82.42 | PREDICTED: uncharacterized protein LOC103485703 [Cucumis melo] >KAA0037012.1 unc... | [more] |
XP_022152473.1 | 1.8e-44 | 67.66 | uncharacterized protein LOC111020194 [Momordica charantia] | [more] |
XP_022939117.1 | 1.0e-39 | 63.69 | uncharacterized protein LOC111445118 [Cucurbita moschata] >KAG6578325.1 hypothet... | [more] |
XP_022993375.1 | 7.1e-38 | 63.69 | uncharacterized protein LOC111489418 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LQ09 | 2.2e-64 | 84.24 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G402070 PE=4 SV=1 | [more] |
A0A5D3C651 | 3.1e-63 | 82.42 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3B3U6 | 3.1e-63 | 82.42 | uncharacterized protein LOC103485703 OS=Cucumis melo OX=3656 GN=LOC103485703 PE=... | [more] |
A0A6J1DEY5 | 8.5e-45 | 67.66 | uncharacterized protein LOC111020194 OS=Momordica charantia OX=3673 GN=LOC111020... | [more] |
A0A6J1FFX5 | 4.8e-40 | 63.69 | uncharacterized protein LOC111445118 OS=Cucurbita moschata OX=3662 GN=LOC1114451... | [more] |
Match Name | E-value | Identity | Description | |
AT1G71910.1 | 7.7e-06 | 32.45 | unknown protein; Has 28 Blast hits to 28 proteins in 10 species: Archae - 0; Bac... | [more] |