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HG10018145 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGACGCAGAAACAGAGCTGGGAAGCGCAACAATCGCAACAGATGCAGAGGGTGAAGAGCTCGGGGATGATAAGCAGCCATGTGAATGCGATTGGGAGTCCGTTGAAGGAGGATCAAGAGGAGGAGCTTTCGCGATCGGCGTTGGCTCTGTTCAGAGCTAAGGAAGAGGAGATCGAGAGGAAGAAGATGGAGATGAGAGAAAAGGTGGAAGCTCGCCTTGGAAGAGCTGAAGAAGCAACGAAGCGATTGGCGGAGATTCGCGAAGTAAGTGTGGAATCCTCCATTGATGATGGTTAATAATGATTGGTTTTGAGGTTTTTCCACTGATTAGGGTTTGTGAAATTGATAGGAACTTGAAGGAATGACGGATCCGATGAGGAAGGAAGTTTCGTTCATACGGAAGAAGATTGATTTGGTCAACAAAGAGTTGAAGCCATTGGGACTCACTTGCCAAAAGAAGGTCACAATTTCAAACTCCACAAATCCCTCTTCAATCTTCTATTATCATTTTGGTTATGATATTTTTAAGTTTATGTTGTTTTTAAATATAGAAAAATGAATCAAACTATCTATAAATATTAAAAAATTTTAATGGGTCGCGATAGAATTATAAAAGTAATTTTCTATCACTCAAGCGTATTACATTTGTAAATAGTTTGATGTTTTTTCTATTTTTAATAATTTTTTCTTTAGTTATCTAAAAAATGTCTATTTTAAATTTTAAACTCCAAAAAATATTAGATTGTTTTCAAATGTAGAAAGATGAGTCAAACTATTTACAAATATAGAAAATTTTTACAGTCTATCAGTGATAGACCGCGATAGAATTCTATCGCGGTCTATCACTGATAGACAGTTAAATTTTTCTATATTTGTAAATAATATGATATTTTTTTTATATTTATAGTAATTTCCCAAAAATATTAGTGGTAGTGTTTGAAATTTCAACACCATTATATTTTGGTCCTAAATTTTTTAAGAATATCCATCCATGTGTTGGAACTTTCAAAATATACATCTTTATTTAGTGTTTAAACTTTAATTTAACCACATATAAGGATGTGAGAATTCAAATCACCGACCTCTTAAAAAAGATATACATTTAACCCATTTGAACTATATGCACGAACCTGACAAACTCTAGATTTTGGTATATCTCAGTTCTAAGTTTTAAAAAGTAAAATGAGATTCGCAGCAATTAAATAAGTCTCATCTAATAAAATAGTGACATGATTAAATATAAGGGGATTTTTAAAAATAAAAAAATAAGGGAAGCTATTTACACAAAATAGCAAAATTTTTAGATAGTTGTGATAGACGTTGATAGAAGTCTATCATGGTCTATAAGTGATATAAATGATAAAAGGTTATCATTGATAGATGTTGATAGAAGTCTATCAATGTCTATGAGTATTTTTTTGCTATTTTTTATAAATTATTTGACATTTTTTCTATATGTGAAAATTTCCCTTATATATAAATGAGATATTTGTTCTATTATTATTATATTTATTTATTATTTATTATTTTTAGACTTGAAGCATAGCATAGTGTGCATAATTAATATTTTGATTTATTTGGGCCCTACCAGGAGAGAGAATACAAAGAAGTCCTAGATTTATTTAACGAGAAGAACAAAGAGAAATCTCAATTGGTAGCCAAACTAATGGAGGTGACTTTTTTTTCCCTTCCTCTCCCTAAGGGCTTATATGTTATTAAAGTTTTAGTTCATATGTTTTAATTTTTAATTTCGAGGGCTAACTATATAGACATTCAATCTAATTGCAATGAAGAGCATGTTTAGGACTAATAATTAAGTGTACAACAATACTTTTAAAGAATTGCAAATATAACAAAATCTATCGGTGATAGGCTCTATCGTTGATAGACTTTTACAAGTGATATAGTCAATTACTTATTGACTTGAGAACTGGATCTAAATTTTGCTATATAAATATCTTTTTAAATGAGTCCTAATTTTTATGTATGTCTATAGTTATCATATTTTTCATAAAAAGCGTTTTCATAAGGGTAATTATTTTAAATAGCAAAAGGTTAAAAATATTTTTTAATATATCAAAATGTCATTGTCTATTAATAATAGATAGTGATAAATATATAGACTACTATCATCTATCAGTGAACTGATAGATACTGATAGAATTCTATCGCTTGAGCAATAGTTCCAAAACTTATATAAGTGTTTACAAATATAGAAATTTTTTACTATCTATCAGCGATAGAAAACGATAGAATTCTACTGTGATCTATCGCTGATAGACAGCAAATTTTTTTCTATATTTATAAATAGTTTGACTCATTTTTCTATATTTGAAAACAATGACCCTAATATTTATTTTAATTTTTAATTTTAAAAATTTTGATGAAGTTTACCAAACTTTCATAATTTTATAACATAAAAACAACGGAATAAATTTAGTATTGTTTTAGTAAAGAATAAATATAGTATAAACTATCATTACTATAGCTAAAATGAGTATAGTAGCTATAATTGACATGTAATCTCTCACTTGATCATCAAAAGTTCGATTTCTATTTTCGTGATTGTTGAATATATATGATCGAATTTTAGACTTTTGATTGCTAACATATTTGATTGTATATTTGAATAATTTGGTCAGTTGGTGAATGAGAGCGAAAAATTGAGGATGAAGAAGTTGGAAGAGCTGAGCAAGAACATTGACATCCTTCATTAA ATGACGACGCAGAAACAGAGCTGGGAAGCGCAACAATCGCAACAGATGCAGAGGGTGAAGAGCTCGGGGATGATAAGCAGCCATGTGAATGCGATTGGGAGTCCGTTGAAGGAGGATCAAGAGGAGGAGCTTTCGCGATCGGCGTTGGCTCTGTTCAGAGCTAAGGAAGAGGAGATCGAGAGGAAGAAGATGGAGATGAGAGAAAAGGTGGAAGCTCGCCTTGGAAGAGCTGAAGAAGCAACGAAGCGATTGGCGGAGATTCGCGAAGAACTTGAAGGAATGACGGATCCGATGAGGAAGGAAGTTTCGTTCATACGGAAGAAGATTGATTTGGTCAACAAAGAGTTGAAGCCATTGGGACTCACTTGCCAAAAGAAGGAGAGAGAATACAAAGAAGTCCTAGATTTATTTAACGAGAAGAACAAAGAGAAATCTCAATTGGTAGCCAAACTAATGGAGTTGGTGAATGAGAGCGAAAAATTGAGGATGAAGAAGTTGGAAGAGCTGAGCAAGAACATTGACATCCTTCATTAA ATGACGACGCAGAAACAGAGCTGGGAAGCGCAACAATCGCAACAGATGCAGAGGGTGAAGAGCTCGGGGATGATAAGCAGCCATGTGAATGCGATTGGGAGTCCGTTGAAGGAGGATCAAGAGGAGGAGCTTTCGCGATCGGCGTTGGCTCTGTTCAGAGCTAAGGAAGAGGAGATCGAGAGGAAGAAGATGGAGATGAGAGAAAAGGTGGAAGCTCGCCTTGGAAGAGCTGAAGAAGCAACGAAGCGATTGGCGGAGATTCGCGAAGAACTTGAAGGAATGACGGATCCGATGAGGAAGGAAGTTTCGTTCATACGGAAGAAGATTGATTTGGTCAACAAAGAGTTGAAGCCATTGGGACTCACTTGCCAAAAGAAGGAGAGAGAATACAAAGAAGTCCTAGATTTATTTAACGAGAAGAACAAAGAGAAATCTCAATTGGTAGCCAAACTAATGGAGTTGGTGAATGAGAGCGAAAAATTGAGGATGAAGAAGTTGGAAGAGCTGAGCAAGAACATTGACATCCTTCATTAA MTTQKQSWEAQQSQQMQRVKSSGMISSHVNAIGSPLKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH Homology
BLAST of HG10018145 vs. NCBI nr
Match: XP_038893849.1 (uncharacterized protein LOC120082661 [Benincasa hispida]) HSP 1 Score: 302.0 bits (772), Expect = 3.4e-78 Identity = 171/178 (96.07%), Postives = 176/178 (98.88%), Query Frame = 0
BLAST of HG10018145 vs. NCBI nr
Match: XP_008461743.1 (PREDICTED: probable DNA double-strand break repair Rad50 ATPase [Cucumis melo] >KAA0040914.1 putative DNA double-strand break repair Rad50 ATPase [Cucumis melo var. makuwa] >TYK10622.1 putative DNA double-strand break repair Rad50 ATPase [Cucumis melo var. makuwa]) HSP 1 Score: 292.0 bits (746), Expect = 3.5e-75 Identity = 167/178 (93.82%), Postives = 173/178 (97.19%), Query Frame = 0
BLAST of HG10018145 vs. NCBI nr
Match: XP_004139478.1 (uncharacterized protein LOC101203874 [Cucumis sativus] >KGN64906.1 hypothetical protein Csa_022823 [Cucumis sativus]) HSP 1 Score: 290.4 bits (742), Expect = 1.0e-74 Identity = 168/178 (94.38%), Postives = 172/178 (96.63%), Query Frame = 0
BLAST of HG10018145 vs. NCBI nr
Match: XP_022142637.1 (uncharacterized protein LOC111012700 [Momordica charantia]) HSP 1 Score: 288.5 bits (737), Expect = 3.9e-74 Identity = 165/178 (92.70%), Postives = 171/178 (96.07%), Query Frame = 0
BLAST of HG10018145 vs. NCBI nr
Match: XP_022970344.1 (uncharacterized protein LOC111469338 [Cucurbita maxima]) HSP 1 Score: 271.6 bits (693), Expect = 4.9e-69 Identity = 157/177 (88.70%), Postives = 160/177 (90.40%), Query Frame = 0
BLAST of HG10018145 vs. ExPASy TrEMBL
Match: A0A5D3CH78 (RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G001010 PE=3 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 1.7e-75 Identity = 167/178 (93.82%), Postives = 173/178 (97.19%), Query Frame = 0
BLAST of HG10018145 vs. ExPASy TrEMBL
Match: A0A1S3CFV6 (RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103500274 PE=3 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 1.7e-75 Identity = 167/178 (93.82%), Postives = 173/178 (97.19%), Query Frame = 0
BLAST of HG10018145 vs. ExPASy TrEMBL
Match: A0A0A0LY59 (RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_1G153510 PE=3 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 5.0e-75 Identity = 168/178 (94.38%), Postives = 172/178 (96.63%), Query Frame = 0
BLAST of HG10018145 vs. ExPASy TrEMBL
Match: A0A6J1CNF1 (RAB6-interacting golgin OS=Momordica charantia OX=3673 GN=LOC111012700 PE=3 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 1.9e-74 Identity = 165/178 (92.70%), Postives = 171/178 (96.07%), Query Frame = 0
BLAST of HG10018145 vs. ExPASy TrEMBL
Match: A0A6J1I589 (RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111469338 PE=3 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 2.4e-69 Identity = 157/177 (88.70%), Postives = 160/177 (90.40%), Query Frame = 0
BLAST of HG10018145 vs. TAIR 10
Match: AT2G27740.1 (Family of unknown function (DUF662) ) HSP 1 Score: 198.0 bits (502), Expect = 6.5e-51 Identity = 112/175 (64.00%), Postives = 147/175 (84.00%), Query Frame = 0
BLAST of HG10018145 vs. TAIR 10
Match: AT3G09980.1 (Family of unknown function (DUF662) ) HSP 1 Score: 192.2 bits (487), Expect = 3.6e-49 Identity = 104/138 (75.36%), Postives = 123/138 (89.13%), Query Frame = 0
BLAST of HG10018145 vs. TAIR 10
Match: AT2G36410.2 (Family of unknown function (DUF662) ) HSP 1 Score: 181.0 bits (458), Expect = 8.2e-46 Identity = 108/172 (62.79%), Postives = 133/172 (77.33%), Query Frame = 0
BLAST of HG10018145 vs. TAIR 10
Match: AT3G52920.2 (Family of unknown function (DUF662) ) HSP 1 Score: 180.6 bits (457), Expect = 1.1e-45 Identity = 111/174 (63.79%), Postives = 135/174 (77.59%), Query Frame = 0
BLAST of HG10018145 vs. TAIR 10
Match: AT2G36410.3 (Family of unknown function (DUF662) ) HSP 1 Score: 176.0 bits (445), Expect = 2.6e-44 Identity = 106/172 (61.63%), Postives = 131/172 (76.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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