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HG10018132 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAATGTAAGTTCCTAATCCTCGTTCTTCCTGTAATTTGTTTCAATAATGTTCAAACTACTTGATTCTGCCATTTTTTTTTAACAGAGCTCTCAATTTAAGAGCTCTCAATTTACTGTCGCTAACAGTTTATTGTTCGCAGATTAGAGGCCAATGCAGGCCCTCTTACAAATTTCGAGGTGCTCGATTTTTTAAGATCAAAGGGCGCAGCTAAGGATCCCACTAGGGTTCTTGCGAAAGTGGCACCATCTGAGTACAAGGTTATATATTTTCTTCCCTTCTTTTGTGCTGGACTATGAGTTTGATGCTGCAGGTTCTGATCAGATCTTTTTTTAATTTCTGTTTTTAGGTTTATGATTATTTGAATCAAACTCCTGCTTGTAATCAAACGAGAGAAGCTATAATTGAGTTTGTTGACAAGTCCAAGAAGTATGATCTTGCGAAAGCTGAAATTCTCAATGCCATCAATTTGCGCCCGATTACCAATGTTGAGATATATACGGTAATTTCCCCCTTTCTTGGCATTAATTCTTCCCTTTAATTTTGGAATGAATTTTATGCTATGTTTTTGTGTATAATCTCTGTTCTAAACTCATCTCCCATTTTCCCATATGTGAATAAGGTCATTTCTTTTCATTGGTGCCTCATATTTTTGAAGAGTCTAAGTGTTAGGAGGTAAAGGAACTGTGAATGCCTTGGAAAGTTTGGTGGACAGAGGAGATCCATAATATTTCAGCTATTTTAATATGAGGCCTTCTAATTGCAGTTTTAATGTGTTGGAAGAGAATTTTGTAGTCTTTGTAGCTATTTACTTTTCTATTGACATTACAAAAACTTAGATTCTCTGGCTATGGAGCACATTTATCATCTTCATCAATTAATTTGTAGTCCTATAAAGACTCACTTTGGGGTTGTCGTAAGGATTCCTAAAAACAGCTTTGGCTTTCGACAAAATAGTGTAGTGAAGATGTTTTTCCTTTCAAAACGATGAACCCTCATGTATAGTTATTAGTATCTACTTTCAAAACGTGATCCAACCTTTTCAAGCTGCCCAAAAATTATACTAAAAAATAGTTCTGTAAATAAAAACAAAAAGTTCTTTCCCCTGTACTCAAAGTATTTGTTATGCCGAAGTGAATATAGCTCAACTAGCATATGGGTGTGTTAGCGACTACGAGATCTGTGGTTCGAATTCTTCTACCCCTATTGTACTTAAAAATACTCAAAGTATCTATACCACGTTGTATTATACTTTTTAGTCATGGCCTATTATGCATCCTACTAGACATTCACTTTTTAGTATCAAGTTTTCTACTTGAGCCTTGAACTTAAGAATTTATAAGATATCTCCAAACATTCCACAACTCATGTCAACTAATACTAGGCCATTCTTGGGGGGTAAAGTTGTTTTTCAAAGTAGCTCCCAAACAAATTCTTGTCTGGCTTTTACCATGGTTTTTTTTTCTCTGTTGGGAGCTTCAAACTTGGGATGCTTTGTTTAGGAATTTTCATGTAAGAATCTGATGGACGAAGAAAACGAAAACATTAATTTAGATTAGTGGTTAAATTGAGATGTAGATTAATTGGGGTCTATTCCTTTCGTTTCTAGTTTATAGAGGACTGTGAGGATCGCATGGGAGATGATGGAATGCAAGAGCTTGTAGAGATGGTGAAACAGGTGTTCCCTACTCCTCAAACTCAACCAACATCTGAAGTAGCCCCGAAGGAAGCTAAAGAGGCCGAAACCATGGAAGAAAAAGAAGGAGCTGCGAATGCCGATGAAGAACCCATGGAAACGACTTGA ATGAAAATATTAGAGGCCAATGCAGGCCCTCTTACAAATTTCGAGGTGCTCGATTTTTTAAGATCAAAGGGCGCAGCTAAGGATCCCACTAGGGTTCTTGCGAAAGTGGCACCATCTGAGTACAAGGTTTATGATTATTTGAATCAAACTCCTGCTTGTAATCAAACGAGAGAAGCTATAATTGAGTTTGTTGACAAGTCCAAGAAGTATGATCTTGCGAAAGCTGAAATTCTCAATGCCATCAATTTGCGCCCGATTACCAATGTTGAGATATATACGTTTATAGAGGACTGTGAGGATCGCATGGGAGATGATGGAATGCAAGAGCTTGTAGAGATGGTGAAACAGGTGTTCCCTACTCCTCAAACTCAACCAACATCTGAAGTAGCCCCGAAGGAAGCTAAAGAGGCCGAAACCATGGAAGAAAAAGAAGGAGCTGCGAATGCCGATGAAGAACCCATGGAAACGACTTGA ATGAAAATATTAGAGGCCAATGCAGGCCCTCTTACAAATTTCGAGGTGCTCGATTTTTTAAGATCAAAGGGCGCAGCTAAGGATCCCACTAGGGTTCTTGCGAAAGTGGCACCATCTGAGTACAAGGTTTATGATTATTTGAATCAAACTCCTGCTTGTAATCAAACGAGAGAAGCTATAATTGAGTTTGTTGACAAGTCCAAGAAGTATGATCTTGCGAAAGCTGAAATTCTCAATGCCATCAATTTGCGCCCGATTACCAATGTTGAGATATATACGTTTATAGAGGACTGTGAGGATCGCATGGGAGATGATGGAATGCAAGAGCTTGTAGAGATGGTGAAACAGGTGTTCCCTACTCCTCAAACTCAACCAACATCTGAAGTAGCCCCGAAGGAAGCTAAAGAGGCCGAAACCATGGAAGAAAAAGAAGGAGCTGCGAATGCCGATGAAGAACCCATGGAAACGACTTGA MKILEANAGPLTNFEVLDFLRSKGAAKDPTRVLAKVAPSEYKVYDYLNQTPACNQTREAIIEFVDKSKKYDLAKAEILNAINLRPITNVEIYTFIEDCEDRMGDDGMQELVEMVKQVFPTPQTQPTSEVAPKEAKEAETMEEKEGAANADEEPMETT Homology
BLAST of HG10018132 vs. NCBI nr
Match: XP_023548749.1 (uncharacterized protein LOC111807313 [Cucurbita pepo subsp. pepo] >KAG6574960.1 DNA-directed RNA polymerase III subunit RPC9, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013528.1 DNA-directed RNA polymerase III subunit RPC9 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 250.8 bits (639), Expect = 8.0e-63 Identity = 130/157 (82.80%), Postives = 140/157 (89.17%), Query Frame = 0
BLAST of HG10018132 vs. NCBI nr
Match: XP_023006759.1 (uncharacterized protein LOC111499396 [Cucurbita maxima] >XP_023006760.1 uncharacterized protein LOC111499396 [Cucurbita maxima]) HSP 1 Score: 249.6 bits (636), Expect = 1.8e-62 Identity = 130/157 (82.80%), Postives = 140/157 (89.17%), Query Frame = 0
BLAST of HG10018132 vs. NCBI nr
Match: XP_022958741.1 (uncharacterized protein LOC111459926 [Cucurbita moschata]) HSP 1 Score: 249.2 bits (635), Expect = 2.3e-62 Identity = 129/157 (82.17%), Postives = 139/157 (88.54%), Query Frame = 0
BLAST of HG10018132 vs. NCBI nr
Match: XP_038875324.1 (uncharacterized protein LOC120067805 [Benincasa hispida]) HSP 1 Score: 248.1 bits (632), Expect = 5.2e-62 Identity = 129/162 (79.63%), Postives = 142/162 (87.65%), Query Frame = 0
BLAST of HG10018132 vs. NCBI nr
Match: XP_022138348.1 (uncharacterized protein LOC111009544 [Momordica charantia]) HSP 1 Score: 243.4 bits (620), Expect = 1.3e-60 Identity = 127/157 (80.89%), Postives = 134/157 (85.35%), Query Frame = 0
BLAST of HG10018132 vs. ExPASy Swiss-Prot
Match: Q8VHM6 (DNA-directed RNA polymerase III subunit RPC9 OS=Rattus norvegicus OX=10116 GN=Crcp PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.2e-10 Identity = 45/152 (29.61%), Postives = 77/152 (50.66%), Query Frame = 0
BLAST of HG10018132 vs. ExPASy Swiss-Prot
Match: A0JN61 (DNA-directed RNA polymerase III subunit RPC9 OS=Bos taurus OX=9913 GN=CRCP PE=2 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.8e-10 Identity = 40/145 (27.59%), Postives = 73/145 (50.34%), Query Frame = 0
BLAST of HG10018132 vs. ExPASy Swiss-Prot
Match: O35427 (DNA-directed RNA polymerase III subunit RPC9 OS=Mus musculus OX=10090 GN=Crcp PE=2 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 6.3e-10 Identity = 44/152 (28.95%), Postives = 73/152 (48.03%), Query Frame = 0
BLAST of HG10018132 vs. ExPASy Swiss-Prot
Match: Q60482 (DNA-directed RNA polymerase III subunit RPC9 OS=Cavia porcellus OX=10141 GN=CRCP PE=2 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.4e-09 Identity = 47/149 (31.54%), Postives = 77/149 (51.68%), Query Frame = 0
BLAST of HG10018132 vs. ExPASy Swiss-Prot
Match: O75575 (DNA-directed RNA polymerase III subunit RPC9 OS=Homo sapiens OX=9606 GN=CRCP PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.8e-09 Identity = 42/152 (27.63%), Postives = 77/152 (50.66%), Query Frame = 0
BLAST of HG10018132 vs. ExPASy TrEMBL
Match: A0A6J1L324 (DNA-directed RNA polymerase III subunit RPC9 OS=Cucurbita maxima OX=3661 GN=LOC111499396 PE=3 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 8.6e-63 Identity = 130/157 (82.80%), Postives = 140/157 (89.17%), Query Frame = 0
BLAST of HG10018132 vs. ExPASy TrEMBL
Match: A0A6J1H2X6 (DNA-directed RNA polymerase III subunit RPC9 OS=Cucurbita moschata OX=3662 GN=LOC111459926 PE=3 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 1.1e-62 Identity = 129/157 (82.17%), Postives = 139/157 (88.54%), Query Frame = 0
BLAST of HG10018132 vs. ExPASy TrEMBL
Match: A0A6J1CCS4 (DNA-directed RNA polymerase III subunit RPC9 OS=Momordica charantia OX=3673 GN=LOC111009544 PE=3 SV=1) HSP 1 Score: 243.4 bits (620), Expect = 6.2e-61 Identity = 127/157 (80.89%), Postives = 134/157 (85.35%), Query Frame = 0
BLAST of HG10018132 vs. ExPASy TrEMBL
Match: A0A6J1EQC1 (DNA-directed RNA polymerase III subunit RPC9 OS=Cucurbita moschata OX=3662 GN=LOC111436740 PE=3 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 2.2e-58 Identity = 126/157 (80.25%), Postives = 136/157 (86.62%), Query Frame = 0
BLAST of HG10018132 vs. ExPASy TrEMBL
Match: A0A5A7UV88 (DNA-directed RNA polymerase III subunit RPC9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001320 PE=3 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 8.4e-58 Identity = 120/160 (75.00%), Postives = 137/160 (85.62%), Query Frame = 0
BLAST of HG10018132 vs. TAIR 10
Match: AT5G62950.1 (RNA polymerase II, Rpb4, core protein ) HSP 1 Score: 137.1 bits (344), Expect = 1.2e-32 Identity = 79/140 (56.43%), Postives = 98/140 (70.00%), Query Frame = 0
BLAST of HG10018132 vs. TAIR 10
Match: AT5G62950.3 (RNA polymerase II, Rpb4, core protein ) HSP 1 Score: 137.1 bits (344), Expect = 1.2e-32 Identity = 79/140 (56.43%), Postives = 98/140 (70.00%), Query Frame = 0
BLAST of HG10018132 vs. TAIR 10
Match: AT3G28956.1 (RNA polymerase II, Rpb4, core protein ) HSP 1 Score: 124.0 bits (310), Expect = 1.1e-28 Identity = 75/142 (52.82%), Postives = 98/142 (69.01%), Query Frame = 0
BLAST of HG10018132 vs. TAIR 10
Match: AT5G62950.2 (RNA polymerase II, Rpb4, core protein ) HSP 1 Score: 122.9 bits (307), Expect = 2.3e-28 Identity = 62/91 (68.13%), Postives = 74/91 (81.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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