HG10017927 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGAGGGAATTGCTGCGGATTTTGAACACCTGAGTTTATTAGGGGTAGAAGAAAATATATCGGTTCTAATCGATCCCGAAATAGTCCGAGAGGTAGATAATCAACTCAATCATTGCCTCTTTGGAAAGCTTCTGGCGCCGAGAGCAATTTCAGGAAATGTAATAAAGAACACATTTTTTAATGCTTGGAGATTCGACAATGGAATCAGTGTTGAAGCCATCGGAAGAAATCTCTTTTTGTTCACTTTTGAAAAAATCCTGGATAAAAAATGGGGTTTAAGTGCTGGACCCTGGTTGTTTGATAAACATCTTCTTGTTTTAGAAGAACCAGAGATTGACTTAAAGCCTTCAGAATAA ATGGATGAGGGAATTGCTGCGGATTTTGAACACCTGAGTTTATTAGGGGTAGAAGAAAATATATCGGTTCTAATCGATCCCGAAATAGTCCGAGAGGTAGATAATCAACTCAATCATTGCCTCTTTGGAAAGCTTCTGGCGCCGAGAGCAATTTCAGGAAATGTAATAAAGAACACATTTTTTAATGCTTGGAGATTCGACAATGGAATCAGTGTTGAAGCCATCGGAAGAAATCTCTTTTTGTTCACTTTTGAAAAAATCCTGGATAAAAAATGGGGTTTAAGTGCTGGACCCTGGTTGTTTGATAAACATCTTCTTGTTTTAGAAGAACCAGAGATTGACTTAAAGCCTTCAGAATAA ATGGATGAGGGAATTGCTGCGGATTTTGAACACCTGAGTTTATTAGGGGTAGAAGAAAATATATCGGTTCTAATCGATCCCGAAATAGTCCGAGAGGTAGATAATCAACTCAATCATTGCCTCTTTGGAAAGCTTCTGGCGCCGAGAGCAATTTCAGGAAATGTAATAAAGAACACATTTTTTAATGCTTGGAGATTCGACAATGGAATCAGTGTTGAAGCCATCGGAAGAAATCTCTTTTTGTTCACTTTTGAAAAAATCCTGGATAAAAAATGGGGTTTAAGTGCTGGACCCTGGTTGTTTGATAAACATCTTCTTGTTTTAGAAGAACCAGAGATTGACTTAAAGCCTTCAGAATAA MDEGIAADFEHLSLLGVEENISVLIDPEIVREVDNQLNHCLFGKLLAPRAISGNVIKNTFFNAWRFDNGISVEAIGRNLFLFTFEKILDKKWGLSAGPWLFDKHLLVLEEPEIDLKPSE Homology
BLAST of HG10017927 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia]) HSP 1 Score: 90.1 bits (222), Expect = 1.4e-14 Identity = 42/109 (38.53%), Postives = 67/109 (61.47%), Query Frame = 0
BLAST of HG10017927 vs. NCBI nr
Match: OMO61345.1 (reverse transcriptase [Corchorus capsularis]) HSP 1 Score: 87.0 bits (214), Expect = 1.2e-13 Identity = 44/109 (40.37%), Postives = 65/109 (59.63%), Query Frame = 0
BLAST of HG10017927 vs. NCBI nr
Match: XP_028122006.1 (uncharacterized protein LOC114319195 [Camellia sinensis]) HSP 1 Score: 85.5 bits (210), Expect = 3.4e-13 Identity = 42/102 (41.18%), Postives = 61/102 (59.80%), Query Frame = 0
BLAST of HG10017927 vs. NCBI nr
Match: XP_028124075.1 (uncharacterized protein LOC114321128 [Camellia sinensis]) HSP 1 Score: 84.3 bits (207), Expect = 7.5e-13 Identity = 41/102 (40.20%), Postives = 61/102 (59.80%), Query Frame = 0
BLAST of HG10017927 vs. NCBI nr
Match: OMP10859.1 (hypothetical protein COLO4_04212 [Corchorus olitorius]) HSP 1 Score: 80.5 bits (197), Expect = 1.1e-11 Identity = 39/110 (35.45%), Postives = 64/110 (58.18%), Query Frame = 0
BLAST of HG10017927 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 6.6e-15 Identity = 42/109 (38.53%), Postives = 67/109 (61.47%), Query Frame = 0
BLAST of HG10017927 vs. ExPASy TrEMBL
Match: A0A1R3GTB5 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_23588 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 5.6e-14 Identity = 44/109 (40.37%), Postives = 65/109 (59.63%), Query Frame = 0
BLAST of HG10017927 vs. ExPASy TrEMBL
Match: A0A1R3KUZ6 (DUF4283 domain-containing protein OS=Corchorus olitorius OX=93759 GN=COLO4_04212 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 5.3e-12 Identity = 39/110 (35.45%), Postives = 64/110 (58.18%), Query Frame = 0
BLAST of HG10017927 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 1.2e-11 Identity = 38/113 (33.63%), Postives = 64/113 (56.64%), Query Frame = 0
BLAST of HG10017927 vs. ExPASy TrEMBL
Match: F6GZ60 (14_3_3 domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_00s0199g00140 PE=3 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 3.4e-11 Identity = 39/99 (39.39%), Postives = 56/99 (56.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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