HG10017893 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10017893
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	60S ribosomal protein L35a-1-like
Location	Chr03: 25399614 .. 25400046 (-)
RNA-Seq Expression	HG10017893
Synteny	HG10017893

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGCTACGTATCTGGTTATAGTTAGGAAAACAGAAAATGATGCAAAAGGGTACTTTTTAAGTTTAGTGCGATGCCGAGAACATTGATGAAACTTGAATAGAAATATTCGTTAGGTTTAGTGATAAATTACTGAGGGATGATATAATTTGTGCGGGAGCTAAGAATGTGAAATTGGTGTTTAGATCGAAGTCAAACCAGTATCCAAGAACATCGCTGATCCAAATTGAAGGGGTGAACACCAGGGAAGAGGTCGCATGGTATGCTGGAAAGCGCTTGGCATACATTTACAAGGCCAAAGTGAAGCAAAATGGAACTCACTACCGATGCATTTGGGGCAAGGTTTCCAGGCCTCATGGTAACAGTGGCATTGTTCGAGCTAAGTTCAAGTCTAACTTGCCCCCAAAATCCATGGTAATGTGTAATGAGTAG

mRNA sequence

ATGAATGCTACGTATCTGGTTATAGTTAGGAAAACAGAAAATGATGCAAAAGGGTTTAGTGATAAATTACTGAGGGATGATATAATTTGTGCGGGAGCTAAGAATGTGAAATTGGTGTTTAGATCGAAGTCAAACCAGTATCCAAGAACATCGCTGATCCAAATTGAAGGGGTGAACACCAGGGAAGAGGTCGCATGGTATGCTGGAAAGCGCTTGGCATACATTTACAAGGCCAAAGTGAAGCAAAATGGAACTCACTACCGATGCATTTGGGGCAAGGTTTCCAGGCCTCATGGTAACAGTGGCATTGTTCGAGCTAAGTTCAAGTCTAACTTGCCCCCAAAATCCATGGTAATGTGTAATGAGTAG

Coding sequence (CDS)

ATGAATGCTACGTATCTGGTTATAGTTAGGAAAACAGAAAATGATGCAAAAGGGTTTAGTGATAAATTACTGAGGGATGATATAATTTGTGCGGGAGCTAAGAATGTGAAATTGGTGTTTAGATCGAAGTCAAACCAGTATCCAAGAACATCGCTGATCCAAATTGAAGGGGTGAACACCAGGGAAGAGGTCGCATGGTATGCTGGAAAGCGCTTGGCATACATTTACAAGGCCAAAGTGAAGCAAAATGGAACTCACTACCGATGCATTTGGGGCAAGGTTTCCAGGCCTCATGGTAACAGTGGCATTGTTCGAGCTAAGTTCAAGTCTAACTTGCCCCCAAAATCCATGGTAATGTGTAATGAGTAG

Protein sequence

MNATYLVIVRKTENDAKGFSDKLLRDDIICAGAKNVKLVFRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMVMCNE

Homology

[Close]

BLAST of HG10017893 vs. NCBI nr
Match: XP_011653915.1 (60S ribosomal protein L35a-1 [Cucumis sativus] >KAE8649740.1 hypothetical protein Csa_012440 [Cucumis sativus])

HSP 1 Score: 164.1 bits (414), Expect = 7.7e-37
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 41  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 100
           RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN
Sbjct: 23  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 82

Query: 101 SGIVRAKFKSNLPPKSM 118
           SGIVRAKFKSNLPPKSM
Sbjct: 83  SGIVRAKFKSNLPPKSM 99

[Close]

BLAST of HG10017893 vs. NCBI nr
Match: XP_008442180.1 (PREDICTED: 60S ribosomal protein L35a-1-like [Cucumis melo] >KAA0041236.1 60S ribosomal protein L35a-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 164.1 bits (414), Expect = 7.7e-37
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 41  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 100
           RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN
Sbjct: 23  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 82

Query: 101 SGIVRAKFKSNLPPKSM 118
           SGIVRAKFKSNLPPKSM
Sbjct: 83  SGIVRAKFKSNLPPKSM 99

[Close]

BLAST of HG10017893 vs. NCBI nr
Match: TYK16037.1 (60S ribosomal protein L35a-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 164.1 bits (414), Expect = 7.7e-37
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 41  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 100
           RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN
Sbjct: 11  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 70

Query: 101 SGIVRAKFKSNLPPKSM 118
           SGIVRAKFKSNLPPKSM
Sbjct: 71  SGIVRAKFKSNLPPKSM 87

[Close]

BLAST of HG10017893 vs. NCBI nr
Match: XP_038883794.1 (60S ribosomal protein L35a-1-like [Benincasa hispida])

HSP 1 Score: 164.1 bits (414), Expect = 7.7e-37
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 41  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 100
           RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN
Sbjct: 23  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 82

Query: 101 SGIVRAKFKSNLPPKSM 118
           SGIVRAKFKSNLPPKSM
Sbjct: 83  SGIVRAKFKSNLPPKSM 99

[Close]

BLAST of HG10017893 vs. NCBI nr
Match: XP_022967923.1 (60S ribosomal protein L35a-1-like [Cucurbita maxima] >XP_022967925.1 60S ribosomal protein L35a-1-like [Cucurbita maxima] >XP_022967926.1 60S ribosomal protein L35a-1-like [Cucurbita maxima])

HSP 1 Score: 162.9 bits (411), Expect = 1.7e-36
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 41  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 100
           RSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN
Sbjct: 23  RSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 82

Query: 101 SGIVRAKFKSNLPPKSM 118
           SGIVRAKFKSNLPPKSM
Sbjct: 83  SGIVRAKFKSNLPPKSM 99

[Close]

BLAST of HG10017893 vs. ExPASy Swiss-Prot
Match: Q9LMK0 (60S ribosomal protein L35a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35AA PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.7e-34
Identity = 64/77 (83.12%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 41  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 100
           RSKSNQYP TSL+Q+EGVNT EEV+WY GKR+AYIYKAK K+NG+HYRCIWGKV+RPHGN
Sbjct: 23  RSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKAKTKKNGSHYRCIWGKVTRPHGN 82

Query: 101 SGIVRAKFKSNLPPKSM 118
           SG+VRAKF SNLPPKSM
Sbjct: 83  SGVVRAKFTSNLPPKSM 99

[Close]

BLAST of HG10017893 vs. ExPASy Swiss-Prot
Match: Q9FZH0 (60S ribosomal protein L35a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35AB PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.7e-34
Identity = 66/77 (85.71%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 41  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 100
           RSKSNQYP TSLIQIEGVNT+EEV WY GKRLAYIYKAK K+NG+HYRCIWGKV+RPHGN
Sbjct: 22  RSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAKTKKNGSHYRCIWGKVTRPHGN 81

Query: 101 SGIVRAKFKSNLPPKSM 118
           SG+VR+KF SNLPPKSM
Sbjct: 82  SGVVRSKFTSNLPPKSM 98

[Close]

BLAST of HG10017893 vs. ExPASy Swiss-Prot
Match: Q9C912 (60S ribosomal protein L35a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35AC PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.7e-34
Identity = 65/77 (84.42%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 41  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 100
           RSKSNQYP TSL+QIEGVNT+EEV WY GKR+AYIYKAK K+NG+HYRCIWGKV+RPHGN
Sbjct: 23  RSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKAKTKKNGSHYRCIWGKVTRPHGN 82

Query: 101 SGIVRAKFKSNLPPKSM 118
           SG+VRAKF SNLPPKSM
Sbjct: 83  SGVVRAKFTSNLPPKSM 99

[Close]

BLAST of HG10017893 vs. ExPASy Swiss-Prot
Match: P51422 (60S ribosomal protein L35a-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35AD PE=3 SV=2)

HSP 1 Score: 146.4 bits (368), Expect = 2.2e-34
Identity = 65/77 (84.42%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 41  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 100
           RSKSNQYP TSL+QIEGVNT+EEV WY GKRLAYIYKAK K+NG+HYRCIWGKV+RPHGN
Sbjct: 22  RSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAKTKKNGSHYRCIWGKVTRPHGN 81

Query: 101 SGIVRAKFKSNLPPKSM 118
           SG+VR+KF SNLPPKSM
Sbjct: 82  SGVVRSKFTSNLPPKSM 98

[Close]

BLAST of HG10017893 vs. ExPASy Swiss-Prot
Match: Q9USX4 (60S ribosomal protein L33-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl35b PE=3 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 2.2e-18
Identity = 41/76 (53.95%), Postives = 56/76 (73.68%), Query Frame = 0


Query: 41  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 100
           RSK   +P TSL++IEG +++EE  +Y GKR+ ++YK+     G+  R IWG VSRPHGN
Sbjct: 19  RSKHVIHPGTSLVKIEGCDSKEEAQFYLGKRICFVYKSNKPVRGSKIRVIWGTVSRPHGN 78

Query: 101 SGIVRAKFKSNLPPKS 117
           SG+VRA+F  NLPPK+
Sbjct: 79  SGVVRARFTHNLPPKT 94

[Close]

BLAST of HG10017893 vs. ExPASy TrEMBL
Match: A0A5A7TGR3 (60S ribosomal protein L35a-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G002100 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.7e-37
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 41  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 100
           RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN
Sbjct: 23  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 82

Query: 101 SGIVRAKFKSNLPPKSM 118
           SGIVRAKFKSNLPPKSM
Sbjct: 83  SGIVRAKFKSNLPPKSM 99

[Close]

BLAST of HG10017893 vs. ExPASy TrEMBL
Match: A0A5D3CVU3 (60S ribosomal protein L35a-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00420 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.7e-37
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 41  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 100
           RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN
Sbjct: 11  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 70

Query: 101 SGIVRAKFKSNLPPKSM 118
           SGIVRAKFKSNLPPKSM
Sbjct: 71  SGIVRAKFKSNLPPKSM 87

[Close]

BLAST of HG10017893 vs. ExPASy TrEMBL
Match: A0A1S3B4N4 (60S ribosomal protein L35a-1-like OS=Cucumis melo OX=3656 GN=LOC103486112 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.7e-37
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 41  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 100
           RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN
Sbjct: 23  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 82

Query: 101 SGIVRAKFKSNLPPKSM 118
           SGIVRAKFKSNLPPKSM
Sbjct: 83  SGIVRAKFKSNLPPKSM 99

[Close]

BLAST of HG10017893 vs. ExPASy TrEMBL
Match: A0A6J1HTF7 (60S ribosomal protein L35a-1-like OS=Cucurbita maxima OX=3661 GN=LOC111467293 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 8.3e-37
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 41  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 100
           RSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN
Sbjct: 23  RSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 82

Query: 101 SGIVRAKFKSNLPPKSM 118
           SGIVRAKFKSNLPPKSM
Sbjct: 83  SGIVRAKFKSNLPPKSM 99

[Close]

BLAST of HG10017893 vs. ExPASy TrEMBL
Match: A0A6J1EL43 (60S ribosomal protein L35a-1-like OS=Cucurbita moschata OX=3662 GN=LOC111435550 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 8.3e-37
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 41  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 100
           RSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN
Sbjct: 23  RSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 82

Query: 101 SGIVRAKFKSNLPPKSM 118
           SGIVRAKFKSNLPPKSM
Sbjct: 83  SGIVRAKFKSNLPPKSM 99

[Close]

BLAST of HG10017893 vs. TAIR 10
Match: AT1G41880.1 (Ribosomal protein L35Ae family protein )

HSP 1 Score: 146.7 bits (369), Expect = 1.2e-35
Identity = 66/77 (85.71%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 41  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 100
           RSKSNQYP TSLIQIEGVNT+EEV WY GKRLAYIYKAK K+NG+HYRCIWGKV+RPHGN
Sbjct: 22  RSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAKTKKNGSHYRCIWGKVTRPHGN 81

Query: 101 SGIVRAKFKSNLPPKSM 118
           SG+VR+KF SNLPPKSM
Sbjct: 82  SGVVRSKFTSNLPPKSM 98

[Close]

BLAST of HG10017893 vs. TAIR 10
Match: AT1G07070.1 (Ribosomal protein L35Ae family protein )

HSP 1 Score: 146.7 bits (369), Expect = 1.2e-35
Identity = 64/77 (83.12%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 41  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 100
           RSKSNQYP TSL+Q+EGVNT EEV+WY GKR+AYIYKAK K+NG+HYRCIWGKV+RPHGN
Sbjct: 23  RSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKAKTKKNGSHYRCIWGKVTRPHGN 82

Query: 101 SGIVRAKFKSNLPPKSM 118
           SG+VRAKF SNLPPKSM
Sbjct: 83  SGVVRAKFTSNLPPKSM 99

[Close]

BLAST of HG10017893 vs. TAIR 10
Match: AT1G74270.1 (Ribosomal protein L35Ae family protein )

HSP 1 Score: 146.7 bits (369), Expect = 1.2e-35
Identity = 65/77 (84.42%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 41  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 100
           RSKSNQYP TSL+QIEGVNT+EEV WY GKR+AYIYKAK K+NG+HYRCIWGKV+RPHGN
Sbjct: 23  RSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKAKTKKNGSHYRCIWGKVTRPHGN 82

Query: 101 SGIVRAKFKSNLPPKSM 118
           SG+VRAKF SNLPPKSM
Sbjct: 83  SGVVRAKFTSNLPPKSM 99

[Close]

BLAST of HG10017893 vs. TAIR 10
Match: AT3G55750.1 (Ribosomal protein L35Ae family protein )

HSP 1 Score: 146.4 bits (368), Expect = 1.5e-35
Identity = 65/77 (84.42%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 41  RSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGN 100
           RSKSNQYP TSL+QIEGVNT+EEV WY GKRLAYIYKAK K+NG+HYRCIWGKV+RPHGN
Sbjct: 22  RSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAKTKKNGSHYRCIWGKVTRPHGN 81

Query: 101 SGIVRAKFKSNLPPKSM 118
           SG+VR+KF SNLPPKSM
Sbjct: 82  SGVVRSKFTSNLPPKSM 98

The following BLAST results are available for this feature:

BLAST of HG10017893 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653915.1	7.7e-37	100.00	60S ribosomal protein L35a-1 [Cucumis sativus] >KAE8649740.1 hypothetical protei...	[more]
XP_008442180.1	7.7e-37	100.00	PREDICTED: 60S ribosomal protein L35a-1-like [Cucumis melo] >KAA0041236.1 60S ri...	[more]
TYK16037.1	7.7e-37	100.00	60S ribosomal protein L35a-1-like [Cucumis melo var. makuwa]	[more]
XP_038883794.1	7.7e-37	100.00	60S ribosomal protein L35a-1-like [Benincasa hispida]	[more]
XP_022967923.1	1.7e-36	98.70	60S ribosomal protein L35a-1-like [Cucurbita maxima] >XP_022967925.1 60S ribosom...	[more]

BLAST of HG10017893 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LMK0	1.7e-34	83.12	60S ribosomal protein L35a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35AA PE=3 SV=...	[more]
Q9FZH0	1.7e-34	85.71	60S ribosomal protein L35a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35AB PE=3 SV=...	[more]
Q9C912	1.7e-34	84.42	60S ribosomal protein L35a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35AC PE=3 SV=...	[more]
P51422	2.2e-34	84.42	60S ribosomal protein L35a-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35AD PE=3 SV=...	[more]
Q9USX4	2.2e-18	53.95	60S ribosomal protein L33-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 2484...	[more]

BLAST of HG10017893 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TGR3	3.7e-37	100.00	60S ribosomal protein L35a-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3CVU3	3.7e-37	100.00	60S ribosomal protein L35a-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3B4N4	3.7e-37	100.00	60S ribosomal protein L35a-1-like OS=Cucumis melo OX=3656 GN=LOC103486112 PE=3 S...	[more]
A0A6J1HTF7	8.3e-37	98.70	60S ribosomal protein L35a-1-like OS=Cucurbita maxima OX=3661 GN=LOC111467293 PE...	[more]
A0A6J1EL43	8.3e-37	98.70	60S ribosomal protein L35a-1-like OS=Cucurbita moschata OX=3662 GN=LOC111435550 ...	[more]

BLAST of HG10017893 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G41880.1	1.2e-35	85.71	Ribosomal protein L35Ae family protein	[more]
AT1G07070.1	1.2e-35	83.12	Ribosomal protein L35Ae family protein	[more]
AT1G74270.1	1.2e-35	84.42	Ribosomal protein L35Ae family protein	[more]
AT3G55750.1	1.5e-35	84.42	Ribosomal protein L35Ae family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001780	Ribosomal protein L35A	PFAM	PF01247	Ribosomal_L35Ae	coord: 41..117 e-value: 2.2E-33 score: 114.3
IPR001780	Ribosomal protein L35A	PANTHER	PTHR10902	60S RIBOSOMAL PROTEIN L35A	coord: 40..118
IPR038661	Ribosomal protein L35A superfamily	GENE3D	2.40.10.190	translation elongation factor selb, chain A, domain 4	coord: 34..120 e-value: 4.4E-35 score: 121.9
None	No IPR available	PANTHER	PTHR10902:SF23	SUBFAMILY NOT NAMED	coord: 40..118
IPR018266	Ribosomal protein L35Ae, conserved site	PROSITE	PS01105	RIBOSOMAL_L35AE	coord: 92..113
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 41..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10017893.1	HG10017893.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0006412	translation
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome