HG10017691 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10017691
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionABC transporter A family member 1
LocationChr03: 19202200 .. 19208177 (+)
RNA-Seq ExpressionHG10017691
SyntenyHG10017691
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGACTCCAGAAGACGCTTCCTTGCCAACGGCAACTGCCTCCATTTTTGTTCTTCTCTTCTTCTCTCGCTGTCTTCTCCCTCCGTATGTCTCTGACTCTGCCTTTCCGTCTTCTCTGAGAACCTCCGTCCATCCCTCGATCCACCGGAGATGGGACTTGCATGGAGGCAGCTCCAGGTTATGCTCCGCAAGAACTGGCTACTCAAAATTCGCCACCCTTTTATCACCTCCGCAGAGGTTCTACTCTCTCTTCATCCTTTTACTTTCGCCGTCGCTTTACATGCTTGTTACTTTTCATCCCAATCTACTCGCTAGGGTTTTCTTGTTCACTGTGGATCTCATTCATGTATCAAGCGCCGCGGCGTCAAATTCCTGGAGAATTTGCTGTTTGTTGATGTTATTGAGTGTACAAGAATATGCGTTATTACTAGAAATGCGACTTATTTTTTTTTTTCACTGTCATTCTTCTTTACGCGAAGTTCTTCTACTCTTCTGTTTTGTTATCGATCGTTCTATTTCTGTTCTGTTCTGTTCTGGAATGGAAGATTGAATGACTAATATGTTGTTTCTGTTTCTGGCAGATTTTACTTCCGACTGTGGTGATGATGTTACTGATAGCCGTAAGAACGCAAGTTGATAACACAGTCCATCCTCCGCAACCGTGAGTTCCAAAAAACTGCTTCTCTCTGACTTATGACTTATCAGTGGTCCGTTATTTTATGACATTTGTTTTGTTCGTTTGAGTTTTGTATCGTAGTATATGCTCGTGGATCGTGCTTTATTTTTCATTTTTTTTCTGGATTTCATGCTCCTCTTTCAAAATGTTTTTACGGCTATCCTCAGTGTGTAAATAATCGTAGATGTCAAGGTCTCTCTGTATTTAGCTTCGGTAGTTTTGAGGACGCTCTCTTTTTATGTAATGCTCCTAAGGAGATAACTTTTAGGAAAATACTTAGTGCATTCGGGCTGTACCTATCTTTGACATCCCACCCAATTGAATTCTTCTTACTTCATTTTTGAAATATTTTAATTCATTTTGTGTGTGTTGGGAGTGGGATACATAAAGATGGGTGCATCCCTATATATATATATTTTTCTTTTTGGTGTAGGCATATACAGAAAGGAATGTTTGTAGAAGTTGGCAAAGGTATATCCCCGAGTTTCCAAGAAGTTCTGGAGTCACTGAAGAATAATGGAGAATATTTGGCTTTTGCACCAGATACAGTCGAGACGAAGACCATGCTACATTTGATGTCAATAAAATTTCCTCTTTTAGAGGTACATATCTGTGCTTACCTTGTAATTTAATTCAATTTGTATAAAAATGAGTTGGGGTAGTCTTATCTAAAAAAAATGAGTTGGGGTAGGACTTAAGCTGCACCCTAGTGGTGTTTCTGAAGGCCTCTTCATGGTGCTCCCTCTCCAAAAGCTTTGTAGGATATACTATTCAGGATATTTATCTTAATTGGAATGCTTTTATGTTACCATCTTAAATTAATATTGTATTACATTTATTTGTTTTTCTTTCTTGTTTCCACTCATGGGGTTCTTGTTCTGTTGATTGTTACTCTCTTTTCGTTCCATCAATGAAAAGTGCCTACTCGTTTCTTTTCAAAAAAGAAGAAAAAAAGGGTAAGAAGCTGCCCTATTATAGAGTCTCAAGACCCTACTAGTAATGTTATATGTTATTATAATGAACTAGTTTGGAATTACATGTAATGGTGCTCCTGGAGCATCGCTTAAACCTTGATCCCAAAAAATTGTGACGCATTTATTTGGTATCCAGGTTCTAGGGTGGCATCAAAACAAGCAATAGGATTTAGAGAAGGAACCCTTTATTTAGTGTAGTGAGTGCTTATTGTTATAGTATATATGTGAACATAGAACTTATTAGTCTTTTATTCTTTATTACAATTTTACTATTTTTAGTTTAGGGCTTCCATGTATGCCTATATATATTGAATCCAATGTATAGAATGAAGATGTTTCTTCTGGATTTTGGGTCTCACAATATCATGATATCAAAGTACGCCTTTTCATGGGAAAATTTGGATTTTGTTACCCTTTAGGGTTTTGTGAACCTTTAGGGTGTTTTCAGTTAAGTTTGATAGTGTAAAGACCCAAAATACGAGAAAGCTTGTTTCTCATTCTATACATTAGAGTTCAATATATAGGAATACATGGAACCCCTAAACTAGAATAGTAAAATTACAATAAAGGACAAAAGACTAAGAAACCTCTATATTAAATATATACTATAACACTTCCCCTTAAGCTGGAGCATATATGTTAATCATGCTCAACTTGTTAGAAAGGTAATCTATTCAAACTCCATTTAAAGCTTTTGCGATATCTTCGAATTGCTCTCCAGTTTTCACATATCCAGTAGACATCAAACCTTGTTGTATTTTTTCGTGAACAAAATGACAATCAATTTCAATATGTTTAGTTCACTCATGAAATAATGGGTTGTATGCAATATGAAGGGCAACTTAGTTGTCAGTTGTTACAACACAACTTAGTTGGAATTGTAATAGTGAAGCTTAACTAGATCAATTGTTGATGTACCCATATTTCATAAACTGATTGTGTCTTAGCTTTGTATACTGATTTAGCATTTGATCGTGAGACTTTGTTCTTACTCTTCCATGAAACCAAATTGCCTCCAACAAACACACAATAGCCCGAAGTTGAATTTCTGTCTTCTTAATCAACTGTGTGTGAATTGTGAAGTAATAATCGAACATACAATGCTTACCAAATAAGCTGTATCATGTATGGTCGTGTCACTATAAGGTAATTCAACTTTCCAACCAATTTTCTATGTCTCTGAGGATCTTTATATGATTCTTCATCTATTGAAAGTTGTAGACTAGGCATAATCAAAGCTACACACTTAAGTGATAAAAGGTGACCCACTTTATCTTTCTACCCTTGAGCAACAAACCATGGTGGTTGCATATACACTTCCTCTTAAAGATCACCATGGAAAAATGCATTTCTAATGTCAAGTTGATTCAAAAGCCAACCTTGAGTTGTTGTCATAGAAATGAATAACTTGACAAAAGTAAGTTTAGCAACAATAGAAAATGTATCAAAATAATCAATCCCATATGTCTGAGCATAGCCTTAGCAACAAGTTGCAGTGTTAAATGAGCGACTAATTCATCAGGGTTGGCCTTAATTGTAAACATTGTTTTGCATATGATGACCTTTTTTCCTGCGAGGAGAGATACTAAATCCCAAGTGCCATGATCATTTTCGGCATTCATATCTTGAATCATCGCAGTATGCCAACCAAAATGAGACTAGGCTTCATGAACGGTCTTAGGGATCGAGACGTAAAAAAATGTAACAAAAGAACATGTAGAAGGTGATATCAAAAAACTCATAATATAGGCAGTTTAGTTTAAGGAGTCCACTTTGGTAAGTTTCTCTCTCTTCTCTCTCTTCTCCCTCCCCTCCCCCTCCTACCTTGCTGTTCCCCTTTCTTCTGCCTGAAGTTAGCATCGCCGGTGAAGATTCCGTCCATCATTCGGCTGCAAGTTTGTATTTCAGAGACCTTCCATCCGGCAACATGGAAATTGAAAGTTGCAAAGTGAATGGTTCATCCTTTTGTATATGGTTTGAATTGGATAAGTTTCATATAGAGGATATGGACGCCAATAAAACTTTTTTGCTTTCCAATGCTCAACTTGGTTGGTTTGTGGAAAGTATCTCAGAACTACTTCGGGGGTCAAGTGATCGATTTTCCTTGAACGGTGGGCGAGACAAATCAGGGGTAGTCAAGCTATCTAAGTTCAAAACGAGTTCTGGTTGGACTATGCGTTGTGTTGTTTGGCCAGCGACAGGTGGTCGTCAATTTCTTCACATACCGATGGGAGTTAATCAATAGGGTTGGCATTCCTTCTTAAATATGCTTAAAAGCTTTTCTAAGAAAAGTGAGTTATTCGTTGATCAGAGTCCAAGTTTATCAAGGAGGTGGTCAGAGCATGGTTCCATGGTAAACTCTTTTCCCTTCATTCCCAAAGATCACATTGCCAGCTATGCAGAAATGGTGAAGAGGAAGGGTCTGACGTCATCCTCTGGTCAAGTTTCGAACATTCAGACTTCATCTTGAGGGAAGAATTTTCAGTTGCCGAAATCCTCTGTTTTGCAATATGGAAAATAGAGCATGGAGTCTTTTTGGATTCTGAAGAATAATGAAGTGCTTCTGGAAGATTTTAGCAATTTATGGGTCATTTCAAGACTTTTTGTTTTCAATGATTGGAAGGAAATTGCTCTATGTTTGGAGAATTATTTTCAAACCAAAGTTTTCATAAATCCTCTATTTGATGATAACGCTCTCATCAAAATTGATCAGGGTAGTTTGGAGAATTTGATTGAAATGCATGGCAAATGGCAGGAGATTGGGCCTTTTCACTTATTGTTCGAAAAATGGAATAAGTCTCGCCATAGCAGGCCGTTGGTATCTAAAGGTTTTGGAGGTTAGATCTCTATTAAGAACCTTCCTCTTGACTACTGGAGAAGAAACACTTTTGAAGCAATTGGAGCTTACTTTGGAGGGCTTGAAGCCATTGCTATAGAGACTCTCAATTTATTAAATTGCTCAGAAGCAAAAATTCAAGTTAAAAAGAATTTGTGTGGTTTTATGCCTTCTACATTAGAGATAACAGATGAAAAGAGGGGTAATCTCTTTTTACATTTTGGTGACATTGCATCTTTAGACCCTCCTGGTAAAATCTTGGATAATTTGTTAGTTAAAGATTTTACCAATCCTATTGATCTTGTTCGAATAAATAAAGTTATGTAGGATGAAGGATTAGATTTCAATCTTGTTAGTCCTGAGATGGATTTTTTTTCACCTTCAAAGAACAAACCAAGTCTCTCCCGAAATCCTTTTGATGCTATTAGGATTGAGTCTGTTCAGGCTCTAGACCCTCCAAAGATTGTTCAAGCTTCACCGGAATTCATAAAGTTGGCTGCCGCTGGCCCTGAATCAAGCCACAGTTCGATGATGGTTGCTGAAAAGGAAGGTGTGAACGCAACATTAGAAATGGATACTTCTCATTTATTGCAGAAAGAGAAAGAAGTCGGCCAAGAATACCATAAGTCTAATGAAATAAATTCTCCTTTTCGACCTTTAATGAGCCAGTCCTCGGTTCCAACACAGAATCCTTTGGCATTCTTCCTACAAGACCTCAGCAGACCAAGGGTCTCGTTTCAATTTCAACCTTGGCAACTCCACGTGCTCTTACTATTGGGCATACTCCTGTTGGGGAAGTAGTCTCGGCTAAGATCACCAATAATGAGCCTCCCTCTGCAATTAATGATGAGAGTATTTGTCTCTCTCCCAAATTAATTCAAGGTGATAGTTCCTTTGAAGCATAAAGAACTTCTACACTGGAATTCGAAAAGGCTTCCTCTGCATTTGTATCAATCCCGAGTGATTCCAGAAGAAGAGCTAAATTGTTAAAGCCGTTTCCCAAACACTTTTCCAGGAAGAAAACTTCGTTTCTCAATTCTTGGTCGACAATTGTGAACTCAGATTTGCTTGAGAAATGCTGTGTTAAGATTCAAATTCCTGAATTCAATCTTAAAAGGTCAGTAGATCCTTCTCCAAAGCCTTCCCCTTTCACACTTTTCGATTTTGCTTTCTCAGGATCATTTGTTAATTTTGTGCGAGGAATTCCAAGCAATTCTTCTAATTCCTCTCGCCTCAATCAACAAGATTCTGATGTAGATTCTGTGGTAAGCGCAAGCAGTGAAGATCTGGAAGCTTCTGAAACAGAGGAAGATTTGGAAGTTGAAAATGTTGAAGATTGTTTTGGTAAAGATTTGCATAATTTATTTCAACCTGAAGTTGGCCAGCTGCAAAGGATGTCTGAAGCTTTCTCCTTCCCTCCACTCATTAGAGATGCAATTCCCCCAAACTTAATCTCTATAGTTGAAGACTGTGACATTGTCCTTGGTTGA

mRNA sequence

ATGTTGACTCCAGAAGACGCTTCCTTGCCAACGGCAACTGCCTCCATTTTTGTTCTTCTCTTCTTCTCTCGCTGTCTTCTCCCTCCGTATGTCTCTGACTCTGCCTTTCCGTCTTCTCTGAGAACCTCCGTCCATCCCTCGATCCACCGGAGATGGGACTTGCATGGAGGCAGCTCCAGGTTATGCTCCGCAAGAACTGGCTACTCAAAATTCGCCACCCTTTTATCACCTCCGCAGAGGTTCTACTCTCTCTTCATCCTTTTACTTTCGCCGTCGCTTTACATGCTTGTTACTTTTCATCCCAATCTACTCGCTAGGGTTTTCTTGTTCACTGTGGATCTCATTCATGTATCAAGCGCCGCGGCGTCAAATTCCTGGAGAATTTGCTGTTTGTTGATGTTATTGAGTATTTTACTTCCGACTGTGGTGATGATGTTACTGATAGCCGTAAGAACGCAAGTTGATAACACAGTCCATCCTCCGCAACCGCATATACAGAAAGGAATGTTTGTAGAAGTTGGCAAAGGTATATCCCCGAGTTTCCAAGAAGTTCTGGAGTCACTGAAGAATAATGGAGAATATTTGGCTTTTGCACCAGATACAGTCGAGACGAAGACCATGCTACATTTGATGTCAATAAAATTTCCTCTTTTAGAGGCTCTAGACCCTCCAAAGATTGTTCAAGCTTCACCGGAATTCATAAAGTTGGCTGCCGCTGGCCCTGAATCAAGCCACAGTTCGATGATGGTTGCTGAAAAGGAAGTCCTCGGTTCCAACACAGAATCCTTTGGCATTCTTCCTACAAGACCTCAGCAGACCAAGGGTCTCGTTTCAATTTCAACCTTGGCAACTCCACGTGCTCTTACTATTGGGCATACTCCTGTTGGGGAAGTAGTCTCGGCTAAGATCACCAATAATGAGCCTCCCTCTGCAATTAATGATGAGAGTATTTGTCTCTCTCCCAAATTAATTCAAGATTTGCTTGAGAAATGCTGTGTTAAGATTCAAATTCCTGAATTCAATCTTAAAAGGTCAGTAGATCCTTCTCCAAAGCCTTCCCCTTTCACACTTTTCGATTTTGCTTTCTCAGGATCATTTGTTAATTTTGTGCGAGGAATTCCAAGCAATTCTTCTAATTCCTCTCGCCTCAATCAACAAGATTCTGATGTAGATTCTGTGGTAAGCGCAAGCAGTGAAGATCTGGAAGCTTCTGAAACAGAGGAAGATTTGGAAGTTGAAAATGTTGAAGATTGTTTTGGTAAAGATTTGCATAATTTATTTCAACCTGAAGTTGGCCAGCTGCAAAGGATGTCTGAAGCTTTCTCCTTCCCTCCACTCATTAGAGATGCAATTCCCCCAAACTTAATCTCTATAGTTGAAGACTGTGACATTGTCCTTGGTTGA

Coding sequence (CDS)

ATGTTGACTCCAGAAGACGCTTCCTTGCCAACGGCAACTGCCTCCATTTTTGTTCTTCTCTTCTTCTCTCGCTGTCTTCTCCCTCCGTATGTCTCTGACTCTGCCTTTCCGTCTTCTCTGAGAACCTCCGTCCATCCCTCGATCCACCGGAGATGGGACTTGCATGGAGGCAGCTCCAGGTTATGCTCCGCAAGAACTGGCTACTCAAAATTCGCCACCCTTTTATCACCTCCGCAGAGGTTCTACTCTCTCTTCATCCTTTTACTTTCGCCGTCGCTTTACATGCTTGTTACTTTTCATCCCAATCTACTCGCTAGGGTTTTCTTGTTCACTGTGGATCTCATTCATGTATCAAGCGCCGCGGCGTCAAATTCCTGGAGAATTTGCTGTTTGTTGATGTTATTGAGTATTTTACTTCCGACTGTGGTGATGATGTTACTGATAGCCGTAAGAACGCAAGTTGATAACACAGTCCATCCTCCGCAACCGCATATACAGAAAGGAATGTTTGTAGAAGTTGGCAAAGGTATATCCCCGAGTTTCCAAGAAGTTCTGGAGTCACTGAAGAATAATGGAGAATATTTGGCTTTTGCACCAGATACAGTCGAGACGAAGACCATGCTACATTTGATGTCAATAAAATTTCCTCTTTTAGAGGCTCTAGACCCTCCAAAGATTGTTCAAGCTTCACCGGAATTCATAAAGTTGGCTGCCGCTGGCCCTGAATCAAGCCACAGTTCGATGATGGTTGCTGAAAAGGAAGTCCTCGGTTCCAACACAGAATCCTTTGGCATTCTTCCTACAAGACCTCAGCAGACCAAGGGTCTCGTTTCAATTTCAACCTTGGCAACTCCACGTGCTCTTACTATTGGGCATACTCCTGTTGGGGAAGTAGTCTCGGCTAAGATCACCAATAATGAGCCTCCCTCTGCAATTAATGATGAGAGTATTTGTCTCTCTCCCAAATTAATTCAAGATTTGCTTGAGAAATGCTGTGTTAAGATTCAAATTCCTGAATTCAATCTTAAAAGGTCAGTAGATCCTTCTCCAAAGCCTTCCCCTTTCACACTTTTCGATTTTGCTTTCTCAGGATCATTTGTTAATTTTGTGCGAGGAATTCCAAGCAATTCTTCTAATTCCTCTCGCCTCAATCAACAAGATTCTGATGTAGATTCTGTGGTAAGCGCAAGCAGTGAAGATCTGGAAGCTTCTGAAACAGAGGAAGATTTGGAAGTTGAAAATGTTGAAGATTGTTTTGGTAAAGATTTGCATAATTTATTTCAACCTGAAGTTGGCCAGCTGCAAAGGATGTCTGAAGCTTTCTCCTTCCCTCCACTCATTAGAGATGCAATTCCCCCAAACTTAATCTCTATAGTTGAAGACTGTGACATTGTCCTTGGTTGA

Protein sequence

MLTPEDASLPTATASIFVLLFFSRCLLPPYVSDSAFPSSLRTSVHPSIHRRWDLHGGSSRLCSARTGYSKFATLLSPPQRFYSLFILLLSPSLYMLVTFHPNLLARVFLFTVDLIHVSSAAASNSWRICCLLMLLSILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLLEALDPPKIVQASPEFIKLAAAGPESSHSSMMVAEKEVLGSNTESFGILPTRPQQTKGLVSISTLATPRALTIGHTPVGEVVSAKITNNEPPSAINDESICLSPKLIQDLLEKCCVKIQIPEFNLKRSVDPSPKPSPFTLFDFAFSGSFVNFVRGIPSNSSNSSRLNQQDSDVDSVVSASSEDLEASETEEDLEVENVEDCFGKDLHNLFQPEVGQLQRMSEAFSFPPLIRDAIPPNLISIVEDCDIVLG
Homology
[Close]
BLAST of HG10017691 vs. NCBI nr
Match: XP_011653432.1 (ABC transporter A family member 1 isoform X1 [Cucumis sativus] >KAE8649360.1 hypothetical protein Csa_019159 [Cucumis sativus])

HSP 1 Score: 157.1 bits (396), Expect = 3.6e-34
Identity = 79/85 (92.94%), Postives = 82/85 (96.47%), Query Frame = 0 

Query: 137 ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLA 196
           ILLPTVVM+LLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVL SLK NGEYLA
Sbjct: 30  ILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLKKNGEYLA 89

Query: 197 FAPDTVETKTMLHLMSIKFPLLEAL 222
           FAPDTVETKTMLHLMS+KFPLLE +
Sbjct: 90  FAPDTVETKTMLHLMSLKFPLLEVV 114

[Close]
BLAST of HG10017691 vs. NCBI nr
Match: XP_031740232.1 (ABC transporter A family member 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 157.1 bits (396), Expect = 3.6e-34
Identity = 79/85 (92.94%), Postives = 82/85 (96.47%), Query Frame = 0 

Query: 137 ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLA 196
           ILLPTVVM+LLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVL SLK NGEYLA
Sbjct: 30  ILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLKKNGEYLA 89

Query: 197 FAPDTVETKTMLHLMSIKFPLLEAL 222
           FAPDTVETKTMLHLMS+KFPLLE +
Sbjct: 90  FAPDTVETKTMLHLMSLKFPLLEVV 114

[Close]
BLAST of HG10017691 vs. NCBI nr
Match: XP_038881444.1 (ABC transporter A family member 1 isoform X2 [Benincasa hispida])

HSP 1 Score: 156.0 bits (393), Expect = 8.0e-34
Identity = 78/85 (91.76%), Postives = 83/85 (97.65%), Query Frame = 0 

Query: 137 ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLA 196
           ILLPTVVM+LLIAVRTQVDNTVHPPQPHI+KGMFVEVGKGISPSFQEVLESLK +GEYLA
Sbjct: 30  ILLPTVVMLLLIAVRTQVDNTVHPPQPHIEKGMFVEVGKGISPSFQEVLESLKKHGEYLA 89

Query: 197 FAPDTVETKTMLHLMSIKFPLLEAL 222
           FAPDTVETKTMLHLMSIKFPLL+ +
Sbjct: 90  FAPDTVETKTMLHLMSIKFPLLKVV 114

[Close]
BLAST of HG10017691 vs. NCBI nr
Match: XP_038881443.1 (ABC transporter A family member 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 156.0 bits (393), Expect = 8.0e-34
Identity = 78/85 (91.76%), Postives = 83/85 (97.65%), Query Frame = 0 

Query: 137 ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLA 196
           ILLPTVVM+LLIAVRTQVDNTVHPPQPHI+KGMFVEVGKGISPSFQEVLESLK +GEYLA
Sbjct: 30  ILLPTVVMLLLIAVRTQVDNTVHPPQPHIEKGMFVEVGKGISPSFQEVLESLKKHGEYLA 89

Query: 197 FAPDTVETKTMLHLMSIKFPLLEAL 222
           FAPDTVETKTMLHLMSIKFPLL+ +
Sbjct: 90  FAPDTVETKTMLHLMSIKFPLLKVV 114

[Close]
BLAST of HG10017691 vs. NCBI nr
Match: TYK11077.1 (ABC transporter A family member 1 isoform X7 [Cucumis melo var. makuwa])

HSP 1 Score: 155.6 bits (392), Expect = 1.0e-33
Identity = 78/85 (91.76%), Postives = 82/85 (96.47%), Query Frame = 0 

Query: 137 ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLA 196
           ILLPTVVM+LLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVL SL+ NGEYLA
Sbjct: 30  ILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLA 89

Query: 197 FAPDTVETKTMLHLMSIKFPLLEAL 222
           FAPDTVETKTMLHLMS+KFPLLE +
Sbjct: 90  FAPDTVETKTMLHLMSLKFPLLEVV 114

[Close]
BLAST of HG10017691 vs. ExPASy Swiss-Prot
Match: Q84M24 (ABC transporter A family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCA1 PE=2 SV=2)

HSP 1 Score: 99.8 bits (247), Expect = 8.9e-20
Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 0 

Query: 137 ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLA 196
           ILLPT+VM+LLIAVRT+VD T+HP   +I K   VEVGKG SPSF EVL+ L   G++LA
Sbjct: 30  ILLPTIVMLLLIAVRTRVDTTIHPAHSNIDKDTVVEVGKGNSPSFPEVLKLLLAEGDFLA 89

Query: 197 FAPDTVETKTMLHLMSIKFPLL 219
           FAPDT ET  M+ ++S+KFP L
Sbjct: 90  FAPDTDETNNMIDILSLKFPEL 111

[Close]
BLAST of HG10017691 vs. ExPASy TrEMBL
Match: A0A0A0KYE2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G172520 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.7e-34
Identity = 79/85 (92.94%), Postives = 82/85 (96.47%), Query Frame = 0 

Query: 137 ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLA 196
           ILLPTVVM+LLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVL SLK NGEYLA
Sbjct: 30  ILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLKKNGEYLA 89

Query: 197 FAPDTVETKTMLHLMSIKFPLLEAL 222
           FAPDTVETKTMLHLMS+KFPLLE +
Sbjct: 90  FAPDTVETKTMLHLMSLKFPLLEVV 114

[Close]
BLAST of HG10017691 vs. ExPASy TrEMBL
Match: A0A5D3CGH2 (ABC transporter A family member 1 isoform X7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00630 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 5.1e-34
Identity = 78/85 (91.76%), Postives = 82/85 (96.47%), Query Frame = 0 

Query: 137 ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLA 196
           ILLPTVVM+LLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVL SL+ NGEYLA
Sbjct: 30  ILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLA 89

Query: 197 FAPDTVETKTMLHLMSIKFPLLEAL 222
           FAPDTVETKTMLHLMS+KFPLLE +
Sbjct: 90  FAPDTVETKTMLHLMSLKFPLLEVV 114

[Close]
BLAST of HG10017691 vs. ExPASy TrEMBL
Match: A0A5A7UJN7 (ABC transporter A family member 1 isoform X7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold697G00700 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 8.6e-34
Identity = 77/85 (90.59%), Postives = 82/85 (96.47%), Query Frame = 0 

Query: 137 ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLA 196
           ILLPTVVM+LLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVL SL+ NGEYLA
Sbjct: 30  ILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLA 89

Query: 197 FAPDTVETKTMLHLMSIKFPLLEAL 222
           FAPDTVETKTMLHLMS+KFP+LE +
Sbjct: 90  FAPDTVETKTMLHLMSLKFPILEVV 114

[Close]
BLAST of HG10017691 vs. ExPASy TrEMBL
Match: A0A1S3CD80 (ABC transporter A family member 1 isoform X7 OS=Cucumis melo OX=3656 GN=LOC103499508 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 8.6e-34
Identity = 77/85 (90.59%), Postives = 82/85 (96.47%), Query Frame = 0 

Query: 137 ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLA 196
           ILLPTVVM+LLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVL SL+ NGEYLA
Sbjct: 30  ILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLA 89

Query: 197 FAPDTVETKTMLHLMSIKFPLLEAL 222
           FAPDTVETKTMLHLMS+KFP+LE +
Sbjct: 90  FAPDTVETKTMLHLMSLKFPILEVV 114

[Close]
BLAST of HG10017691 vs. ExPASy TrEMBL
Match: A0A1S3CCN6 (ABC transporter A family member 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499508 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 8.6e-34
Identity = 77/85 (90.59%), Postives = 82/85 (96.47%), Query Frame = 0 

Query: 137 ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLA 196
           ILLPTVVM+LLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVL SL+ NGEYLA
Sbjct: 30  ILLPTVVMLLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLVSLQKNGEYLA 89

Query: 197 FAPDTVETKTMLHLMSIKFPLLEAL 222
           FAPDTVETKTMLHLMS+KFP+LE +
Sbjct: 90  FAPDTVETKTMLHLMSLKFPILEVV 114

[Close]
BLAST of HG10017691 vs. TAIR 10
Match: AT2G41700.1 (ATP-binding cassette A1 )

HSP 1 Score: 99.8 bits (247), Expect = 6.3e-21
Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 0 

Query: 137 ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPSFQEVLESLKNNGEYLA 196
           ILLPT+VM+LLIAVRT+VD T+HP   +I K   VEVGKG SPSF EVL+ L   G++LA
Sbjct: 30  ILLPTIVMLLLIAVRTRVDTTIHPAHSNIDKDTVVEVGKGNSPSFPEVLKLLLAEGDFLA 89

Query: 197 FAPDTVETKTMLHLMSIKFPLL 219
           FAPDT ET  M+ ++S+KFP L
Sbjct: 90  FAPDTDETNNMIDILSLKFPEL 111

[Close]
BLAST of HG10017691 vs. TAIR 10
Match: AT2G41700.2 (ATP-binding cassette A1 )

HSP 1 Score: 97.8 bits (242), Expect = 2.4e-20
Identity = 56/98 (57.14%), Postives = 71/98 (72.45%), Query Frame = 0 

Query: 126 WRICCLLMLLS-----ILLPTVVMMLLIAVRTQVDNTVHPPQPHIQKGMFVEVGKGISPS 185
           +RI   ++LLS     ILLPT+VM+LLIAVRT+VD T+HP   +I K   VEVGKG SPS
Sbjct: 8   FRIVDQILLLSLIHWQILLPTIVMLLLIAVRTRVDTTIHPAHSNIDKDTVVEVGKGNSPS 67

Query: 186 FQEVLESLKNNGEYLAFAPDTVETKTMLHLMSIKFPLL 219
           F EVL+ L   G++LAFAPDT ET  M+ ++S+KFP L
Sbjct: 68  FPEVLKLLLAEGDFLAFAPDTDETNNMIDILSLKFPEL 105

The following BLAST results are available for this feature:
BLAST of HG10017691 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011653432.13.6e-3492.94ABC transporter A family member 1 isoform X1 [Cucumis sativus] >KAE8649360.1 hyp... [more]
XP_031740232.13.6e-3492.94ABC transporter A family member 1 isoform X2 [Cucumis sativus][more]
XP_038881444.18.0e-3491.76ABC transporter A family member 1 isoform X2 [Benincasa hispida][more]
XP_038881443.18.0e-3491.76ABC transporter A family member 1 isoform X1 [Benincasa hispida][more]
TYK11077.11.0e-3391.76ABC transporter A family member 1 isoform X7 [Cucumis melo var. makuwa][more]
BLAST of HG10017691 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q84M248.9e-2062.20ABC transporter A family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCA1 PE=2 ... [more]
BLAST of HG10017691 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYE21.7e-3492.94Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G172520 PE=4 SV=1[more]
A0A5D3CGH25.1e-3491.76ABC transporter A family member 1 isoform X7 OS=Cucumis melo var. makuwa OX=1194... [more]
A0A5A7UJN78.6e-3490.59ABC transporter A family member 1 isoform X7 OS=Cucumis melo var. makuwa OX=1194... [more]
A0A1S3CD808.6e-3490.59ABC transporter A family member 1 isoform X7 OS=Cucumis melo OX=3656 GN=LOC10349... [more]
A0A1S3CCN68.6e-3490.59ABC transporter A family member 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349... [more]
BLAST of HG10017691 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G41700.16.3e-2162.20ATP-binding cassette A1 [more]
AT2G41700.22.4e-2057.14ATP-binding cassette A1 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 376..407
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 376..400

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10017691.1HG10017691.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0140359 ABC-type transporter activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0016887 ATP hydrolysis activity