
HG10017296 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGATTATTGCGATCTCCGCCAAGCTGTTTTTTACCGGCGGCCGAATCGAATCGGCGTTAGTGCGGAGTCGGCGGTGGCGGGGGATAGGTTTCCGCCGTGGAGTGTACCGGAGACGAAGGAATTGCTTGCGATCAGAGCGGCGTTGGATAGAAGCTTCTCGGAGATGAAACAGAATAGGATGCTTTGGATTTCGGTGGCCGATAAGATGAAGGCGAAAGGCTTCAATCGGAACGATGAGCAGTGTAAGTGTAAATGGAAAAATCTCGTCACTCGTTATAAGGTAATGGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGGTTTTTTTATAACTGCTAACTTATTATCAAAATATTTGTTCAATTATAATTTTATTAAATCTTCGAACGTCTCTATTCTTTGAAATTTTGATTTTTTTTTTTAAAAAAAAAATCACAAATTACTCGACACTAATGAAAGATTTAAATTTATCAATTAAATTTTTATCTTTTTTAAAAAAAATTCAAGAACTTAGTACGAAATACTAAATTGAAGGTCAGAGATGTATTAAATACAAAATAATTTTTTTTAAAACATATTAAATATTTTTAAAATTTCACAACTAAATAAACACAAACTTAAAGAAATTGATCTCTTCAAAATTAAAAGTTGAATTATGGGTCAAATCCGAGGGTTAAGGCATCAAAGTCAGAGTTAAGGCATCAAATCTAACAATTTTTCTTTACCATCTTAAATGTATCATCATCCAGAAATTGAAAAACTGTAAAAATAGAATGTTTGAATTCTTACCGAATAACCATTTAGTTTTATTATTTTTAAAAATTGTGTGTATTTTCTCATCATTTTAATAGAACGTTCTTCATAATATTTGAATTCTTTAATTAAATTTCAAAAATAAAAATAATTAATTTTTAAAACTTAACTTGAATTTTAAAAATATTATTAAAAATTATATAACGAAAAGAAAAAAAAATTATAAGTATAAATAATGTTTATAAACTTTATTTTTAAAATTACTTGGAGTTTGTTGTTTTATTATTAGAATCTGGTTTAAAATTTTAAATTTTTTTGTTAATAATAATAAATTACTTTGGTTCTGAAGTAAGATGTTAAGAACGTGCCAACCTAGTTCTGATATTCATGCATCTCAAAGTATTTTTTTTTTTTAAAAAAAAATAATAATAACAATATTATTATTATTATTATTAACAACTGGTATACTTACTTGATTGTTTGGAAACAGGGAATTAAAAAATAATAATTGTGACAAAAGGAGTTTGCAGCCTTGAAGTAATAGAATGTGTGGTGTTATATTTAATTTTGAAAATGAAGTGTACAAGTTACTCGTTAAATAATTTCTGTATAAAAAATCACAAAACTAATAAACTTTATAATATAAATTGATAATTTGCTACATCAATAATTTGAAATTTCATATTAACGTATCTGAAAAAAAAAAAAGAAGATATTCCATATTAACAACATATTCCTATATAATAATTGAATTTAATTTATTCTAAACTATCAAGTTATTTTTCGAGTTCTTATAACTATAACAAATATATAGTTTTTCTAAAATGAACGAAAAAAATTCTATAAATATTTTAATAATTACAAAGAAATTAACTTATAAATAATATTAAAAAAAAGAAATTTAAGTTAAATAATACACGAAAAATTAAAAGATAAGAGGTTATTTACCCAACATAATCACAAGTATTGAGTTATTTTTAAATGTAGAAAAATTAGCCAAAATATTTATAAATACATAAAAATTTCACTATCTATTAGACTTACAGTCTATTGCTGTCGCTTACAGTCTATTGCTGATAGATAGTAAAATTTATATGTATTTGTAAATAATGTGATATTTTTCTATTTATAATAATTTCTCTATATTATTTTCATTATTTGTCTTAAAAAATATATAAAGATAAAAAAAACTGTTATCTGATACGAGCATAAAAGGTTAAAGGTTCAAATCTAAAAAAAAAAAAAAAAGCCATCTCACTTAGAATAATACACAAGGATAAAATAAGGGAATATGTGTCATTATCAAACAGTTCTCTATATTTTCTTCCTTCTCTTTACTATCTCTCAACCCCTTACAATTCCAGGGTTGTGAAACCATGGATCCCAAAGCTCTAAAGCAGCAATTTCCATTTTACGACGACCTTCATACCATTTTTACTGCAAGGATGCAAAAGAATTGGTGGATCGAAGCCGAAGACCGTTCGGGAGGCTCCAAAAGGAAAGCCACCGAGCTATTCTCCAGCGAGGATCCGAACTGTAATAAAATCGACGAAGACGAAGATGAAGACAAAGTATTCGGGTCAACGAAAACGAAAAAGGGTACGAAAAAGGGGAAATGGAGAAGGGAAGAACATGAGAGGAACTTGAAGGAAATATTGAAGGGTTTTGTGAAAAGAGAGATGGAAATGGAGAGGCAATGGAGAGAAGCATTTAGGGTTAGAGAGGAAGAGAGAAGGTTAAAAGAGGAAGAATGGAGGATGAAAATGGAAGCCATTGAGAGAGAGAGGATGATGATGGAGATATTATGGAGAGAAAATGAAGAGAAGAGAAGAGAGAGAGAAGAAGCAAGGGCTGAGAAGAGAGATGCTTTGATCTCAGCTTTGTTGAGAAGCTTCACATAA ATGGAAGATTATTGCGATCTCCGCCAAGCTGTTTTTTACCGGCGGCCGAATCGAATCGGCGTTAGTGCGGAGTCGGCGGTGGCGGGGGATAGGTTTCCGCCGTGGAGTGTACCGGAGACGAAGGAATTGCTTGCGATCAGAGCGGCGTTGGATAGAAGCTTCTCGGAGATGAAACAGAATAGGATGCTTTGGATTTCGGTGGCCGATAAGATGAAGGCGAAAGGCTTCAATCGGAACGATGAGCAGTGTAAGTGTAAATGGAAAAATCTCGTCACTCGTTATAAGGGTTGTGAAACCATGGATCCCAAAGCTCTAAAGCAGCAATTTCCATTTTACGACGACCTTCATACCATTTTTACTGCAAGGATGCAAAAGAATTGGTGGATCGAAGCCGAAGACCGTTCGGGAGGCTCCAAAAGGAAAGCCACCGAGCTATTCTCCAGCGAGGATCCGAACTGTAATAAAATCGACGAAGACGAAGATGAAGACAAAGTATTCGGGTCAACGAAAACGAAAAAGGGTACGAAAAAGGGGAAATGGAGAAGGGAAGAACATGAGAGGAACTTGAAGGAAATATTGAAGGGTTTTGTGAAAAGAGAGATGGAAATGGAGAGGCAATGGAGAGAAGCATTTAGGGTTAGAGAGGAAGAGAGAAGGTTAAAAGAGGAAGAATGGAGGATGAAAATGGAAGCCATTGAGAGAGAGAGGATGATGATGGAGATATTATGGAGAGAAAATGAAGAGAAGAGAAGAGAGAGAGAAGAAGCAAGGGCTGAGAAGAGAGATGCTTTGATCTCAGCTTTGTTGAGAAGCTTCACATAA ATGGAAGATTATTGCGATCTCCGCCAAGCTGTTTTTTACCGGCGGCCGAATCGAATCGGCGTTAGTGCGGAGTCGGCGGTGGCGGGGGATAGGTTTCCGCCGTGGAGTGTACCGGAGACGAAGGAATTGCTTGCGATCAGAGCGGCGTTGGATAGAAGCTTCTCGGAGATGAAACAGAATAGGATGCTTTGGATTTCGGTGGCCGATAAGATGAAGGCGAAAGGCTTCAATCGGAACGATGAGCAGTGTAAGTGTAAATGGAAAAATCTCGTCACTCGTTATAAGGGTTGTGAAACCATGGATCCCAAAGCTCTAAAGCAGCAATTTCCATTTTACGACGACCTTCATACCATTTTTACTGCAAGGATGCAAAAGAATTGGTGGATCGAAGCCGAAGACCGTTCGGGAGGCTCCAAAAGGAAAGCCACCGAGCTATTCTCCAGCGAGGATCCGAACTGTAATAAAATCGACGAAGACGAAGATGAAGACAAAGTATTCGGGTCAACGAAAACGAAAAAGGGTACGAAAAAGGGGAAATGGAGAAGGGAAGAACATGAGAGGAACTTGAAGGAAATATTGAAGGGTTTTGTGAAAAGAGAGATGGAAATGGAGAGGCAATGGAGAGAAGCATTTAGGGTTAGAGAGGAAGAGAGAAGGTTAAAAGAGGAAGAATGGAGGATGAAAATGGAAGCCATTGAGAGAGAGAGGATGATGATGGAGATATTATGGAGAGAAAATGAAGAGAAGAGAAGAGAGAGAGAAGAAGCAAGGGCTGAGAAGAGAGATGCTTTGATCTCAGCTTTGTTGAGAAGCTTCACATAA MEDYCDLRQAVFYRRPNRIGVSAESAVAGDRFPPWSVPETKELLAIRAALDRSFSEMKQNRMLWISVADKMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKALKQQFPFYDDLHTIFTARMQKNWWIEAEDRSGGSKRKATELFSSEDPNCNKIDEDEDEDKVFGSTKTKKGTKKGKWRREEHERNLKEILKGFVKREMEMERQWREAFRVREEERRLKEEEWRMKMEAIERERMMMEILWRENEEKRREREEARAEKRDALISALLRSFT Homology
BLAST of HG10017296 vs. NCBI nr
Match: XP_038883623.1 (trihelix transcription factor GT-3b-like [Benincasa hispida]) HSP 1 Score: 457.2 bits (1175), Expect = 9.8e-125 Identity = 237/273 (86.81%), Postives = 251/273 (91.94%), Query Frame = 0
BLAST of HG10017296 vs. NCBI nr
Match: XP_011653700.1 (trihelix transcription factor GT-3b [Cucumis sativus] >XP_031739717.1 trihelix transcription factor GT-3b [Cucumis sativus] >XP_031739718.1 trihelix transcription factor GT-3b [Cucumis sativus] >KGN54384.1 hypothetical protein Csa_018084 [Cucumis sativus]) HSP 1 Score: 406.4 bits (1043), Expect = 2.0e-109 Identity = 221/276 (80.07%), Postives = 244/276 (88.41%), Query Frame = 0
BLAST of HG10017296 vs. NCBI nr
Match: XP_008464203.1 (PREDICTED: trihelix transcription factor GT-3b isoform X2 [Cucumis melo] >KAA0059080.1 trihelix transcription factor GT-3b isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 392.5 bits (1007), Expect = 3.0e-105 Identity = 219/278 (78.78%), Postives = 241/278 (86.69%), Query Frame = 0
BLAST of HG10017296 vs. NCBI nr
Match: TYK29247.1 (trihelix transcription factor GT-3b isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 391.3 bits (1004), Expect = 6.6e-105 Identity = 218/278 (78.42%), Postives = 241/278 (86.69%), Query Frame = 0
BLAST of HG10017296 vs. NCBI nr
Match: XP_008464201.1 (PREDICTED: trihelix transcription factor GT-3b isoform X1 [Cucumis melo] >XP_008464202.1 PREDICTED: trihelix transcription factor GT-3b isoform X1 [Cucumis melo]) HSP 1 Score: 386.3 bits (991), Expect = 2.1e-103 Identity = 219/283 (77.39%), Postives = 241/283 (85.16%), Query Frame = 0
BLAST of HG10017296 vs. ExPASy Swiss-Prot
Match: O80450 (Trihelix transcription factor GT-3b OS=Arabidopsis thaliana OX=3702 GN=GT-3B PE=1 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 8.8e-60 Identity = 122/255 (47.84%), Postives = 168/255 (65.88%), Query Frame = 0
BLAST of HG10017296 vs. ExPASy Swiss-Prot
Match: Q9SDW0 (Trihelix transcription factor GT-3a OS=Arabidopsis thaliana OX=3702 GN=GT-3A PE=1 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 2.3e-52 Identity = 127/263 (48.29%), Postives = 173/263 (65.78%), Query Frame = 0
BLAST of HG10017296 vs. ExPASy Swiss-Prot
Match: Q9LU92 (Trihelix transcription factor GT-4 OS=Arabidopsis thaliana OX=3702 GN=GT-4 PE=2 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.7e-10 Identity = 30/98 (30.61%), Postives = 55/98 (56.12%), Query Frame = 0
BLAST of HG10017296 vs. ExPASy Swiss-Prot
Match: Q9FX53 (Trihelix transcription factor GT-1 OS=Arabidopsis thaliana OX=3702 GN=GT-1 PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 5.4e-09 Identity = 29/95 (30.53%), Postives = 48/95 (50.53%), Query Frame = 0
BLAST of HG10017296 vs. ExPASy Swiss-Prot
Match: B2KFW1 (Zinc finger and SCAN domain-containing protein 20 OS=Mus musculus OX=10090 GN=Zscan20 PE=2 SV=2) HSP 1 Score: 56.2 bits (134), Expect = 6.6e-07 Identity = 38/128 (29.69%), Postives = 60/128 (46.88%), Query Frame = 0
BLAST of HG10017296 vs. ExPASy TrEMBL
Match: A0A0A0KZY4 (Myb-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G310210 PE=4 SV=1) HSP 1 Score: 406.4 bits (1043), Expect = 9.6e-110 Identity = 221/276 (80.07%), Postives = 244/276 (88.41%), Query Frame = 0
BLAST of HG10017296 vs. ExPASy TrEMBL
Match: A0A5A7UVF8 (Trihelix transcription factor GT-3b isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold612G00040 PE=4 SV=1) HSP 1 Score: 392.5 bits (1007), Expect = 1.4e-105 Identity = 219/278 (78.78%), Postives = 241/278 (86.69%), Query Frame = 0
BLAST of HG10017296 vs. ExPASy TrEMBL
Match: A0A1S3CKY0 (trihelix transcription factor GT-3b isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502137 PE=4 SV=1) HSP 1 Score: 392.5 bits (1007), Expect = 1.4e-105 Identity = 219/278 (78.78%), Postives = 241/278 (86.69%), Query Frame = 0
BLAST of HG10017296 vs. ExPASy TrEMBL
Match: A0A5D3DZE6 (Trihelix transcription factor GT-3b isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1212G00080 PE=4 SV=1) HSP 1 Score: 391.3 bits (1004), Expect = 3.2e-105 Identity = 218/278 (78.42%), Postives = 241/278 (86.69%), Query Frame = 0
BLAST of HG10017296 vs. ExPASy TrEMBL
Match: A0A1S3CKZ2 (trihelix transcription factor GT-3b isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502137 PE=4 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 1.0e-103 Identity = 219/283 (77.39%), Postives = 241/283 (85.16%), Query Frame = 0
BLAST of HG10017296 vs. TAIR 10
Match: AT2G38250.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 231.9 bits (590), Expect = 6.2e-61 Identity = 122/255 (47.84%), Postives = 168/255 (65.88%), Query Frame = 0
BLAST of HG10017296 vs. TAIR 10
Match: AT5G01380.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 207.2 bits (526), Expect = 1.6e-53 Identity = 127/263 (48.29%), Postives = 173/263 (65.78%), Query Frame = 0
BLAST of HG10017296 vs. TAIR 10
Match: AT3G25990.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 68.2 bits (165), Expect = 1.2e-11 Identity = 30/98 (30.61%), Postives = 55/98 (56.12%), Query Frame = 0
BLAST of HG10017296 vs. TAIR 10
Match: AT1G13450.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 63.2 bits (152), Expect = 3.8e-10 Identity = 29/95 (30.53%), Postives = 48/95 (50.53%), Query Frame = 0
BLAST of HG10017296 vs. TAIR 10
Match: AT1G13450.2 (Homeodomain-like superfamily protein ) HSP 1 Score: 63.2 bits (152), Expect = 3.8e-10 Identity = 29/95 (30.53%), Postives = 48/95 (50.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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