Homology
BLAST of HG10017149 vs. NCBI nr
Match:
XP_038881185.1 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic [Benincasa hispida])
HSP 1 Score: 1466.1 bits (3794), Expect = 0.0e+00
Identity = 733/766 (95.69%), Postives = 749/766 (97.78%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHAPLSFSYKPISNSSIFFSASVSDQLASSS-----SSSPNVHHLPP 60
MA TCVKCYPWSLPH+PLSFS KPISNSSIFFSASVSDQL SSS SSSPNVHHLP
Sbjct: 1 MALTCVKCYPWSLPHSPLSFSSKPISNSSIFFSASVSDQLPSSSSSKFTSSSPNVHHLPL 60
Query: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
DFTPKQLI+ LRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL
Sbjct: 61 DFTPKQLIDALRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
Query: 121 EEMKLSGCEFDRGIFLIFIESYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVD 180
EEMKLSGCEFDRGIFLIF+ESYAKFELYDEVMGIVKEMEDEYR+KPDTRFYNVLLNVLV+
Sbjct: 121 EEMKLSGCEFDRGIFLIFVESYAKFELYDEVMGIVKEMEDEYRMKPDTRFYNVLLNVLVE 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSHGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHD+STFNILIKALCKAHQVRPAILMMEEMPS+GLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTTIMQGYIEEGNLDGALRIKEQM EYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA
Sbjct: 241 FTTIMQGYIEEGNLDGALRIKEQMAEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE 360
NEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE
Sbjct: 301 NEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
EAV ILDQMVSRDC+PNAVTYNTIISSLCK NRVEEATEIARLLTSKGVLPDVCTFNSLI
Sbjct: 361 EAVTILDQMVSRDCTPNAVTYNTIISSLCKANRVEEATEIARLLTSKGVLPDVCTFNSLI 420
Query: 421 QGLCLSSNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELSGCA 480
QGLCLS NHRNA+ELFEEMKGKGCRPDEFTYNMLI SLCSSRKLEEALNLLKEMELSGCA
Sbjct: 421 QGLCLSGNHRNAVELFEEMKGKGCRPDEFTYNMLIGSLCSSRKLEEALNLLKEMELSGCA 480
Query: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHL 540
RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHL
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHL 540
Query: 541 MDQMIMEGLKPDKFTYNSLLTHFCRTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCK 600
MDQMIMEGLKPDKFTYNSLLTHFC+TGDIKKAADIVQTMTSSGCNPDIVTYGTLI GLCK
Sbjct: 541 MDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCK 600
Query: 601 VGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAIRLFREMLEKADPPDAIT 660
GRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEA+RLF+EMLEKADPPDAIT
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFKEMLEKADPPDAIT 660
Query: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSLEDTLVKLVDMI 720
YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLS+EDTLVKLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMEDTLVKLVDMI 720
Query: 721 MEKAKFSESEISTIRGFLKIRKFQDALSTLGGILDDMYPRRSHRGR 762
MEKAKFSESEISTIRGFLKI+KFQDALSTLGGILDD+YPRRS+RGR
Sbjct: 721 MEKAKFSESEISTIRGFLKIQKFQDALSTLGGILDDLYPRRSYRGR 766
BLAST of HG10017149 vs. NCBI nr
Match:
XP_008447642.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g53700, chloroplastic [Cucumis melo] >KAA0032618.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK23499.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1458.0 bits (3773), Expect = 0.0e+00
Identity = 729/766 (95.17%), Postives = 746/766 (97.39%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHAPLSFSYKPISNSSIFFSASVSDQLASSS-----SSSPNVHHLPP 60
MAFTCVKCYPWSLPH PLSFS KPISNSSIFFSASVSDQLASSS SSSPNVH LPP
Sbjct: 1 MAFTCVKCYPWSLPHVPLSFSSKPISNSSIFFSASVSDQLASSSSSNFTSSSPNVHQLPP 60
Query: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL
Sbjct: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
Query: 121 EEMKLSGCEFDRGIFLIFIESYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVD 180
EEMKLSGCEFDRGIFLIF+ESY KFELYDEVMGIVK MEDEYRIKPDTRFYNVLLNVLVD
Sbjct: 121 EEMKLSGCEFDRGIFLIFVESYGKFELYDEVMGIVKVMEDEYRIKPDTRFYNVLLNVLVD 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSHGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPS+GLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTTIMQGYIE GNLDGALRIKEQM+EYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEA
Sbjct: 241 FTTIMQGYIEGGNLDGALRIKEQMIEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAV 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE 360
NEGFRPDQFTYNTLVNGLCKVGHA+HAMEVVDAMLLGG DPDIYTYNSLISG CKLGEIE
Sbjct: 301 NEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGFCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI
Sbjct: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
Query: 421 QGLCLSSNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELSGCA 480
QGLCLSSNH+NAMELFEEMKGKGCRPDEFTYNMLI+SLCSSRKLEEALNLLKEMELSGCA
Sbjct: 421 QGLCLSSNHKNAMELFEEMKGKGCRPDEFTYNMLIESLCSSRKLEEALNLLKEMELSGCA 480
Query: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHL 540
RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYN LIDGLCKSKRVEDAA L
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNILIDGLCKSKRVEDAAQL 540
Query: 541 MDQMIMEGLKPDKFTYNSLLTHFCRTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCK 600
MDQMIMEGL+PDKFTYNSLLTHFC+TGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCK
Sbjct: 541 MDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCK 600
Query: 601 VGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAIRLFREMLEKADPPDAIT 660
GRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEA+RLFREMLEK++PPDAIT
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKSEPPDAIT 660
Query: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSLEDTLVKLVDMI 720
YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPE+SSF+MLAEGL TLS++DTL+KLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEYSSFIMLAEGLYTLSMDDTLLKLVDMI 720
Query: 721 MEKAKFSESEISTIRGFLKIRKFQDALSTLGGILDDMYPRRSHRGR 762
MEKAKF E EISTIRGFLKIRKFQDALSTLGGILDDMYPRRS+RGR
Sbjct: 721 MEKAKFKEREISTIRGFLKIRKFQDALSTLGGILDDMYPRRSYRGR 766
BLAST of HG10017149 vs. NCBI nr
Match:
XP_004142210.1 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic [Cucumis sativus] >KGN54537.2 hypothetical protein Csa_017913 [Cucumis sativus])
HSP 1 Score: 1452.2 bits (3758), Expect = 0.0e+00
Identity = 724/766 (94.52%), Postives = 747/766 (97.52%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHAPLSFSYKPISNSSIFFSASVSDQLASSSSSSPN-----VHHLPP 60
MAFTCVKCYPWSLPHAPLSFS KPISNSSIFFSAS+SDQLASSSSS+ VHHLPP
Sbjct: 1 MAFTCVKCYPWSLPHAPLSFSSKPISNSSIFFSASLSDQLASSSSSNSTSSSHIVHHLPP 60
Query: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL
Sbjct: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
Query: 121 EEMKLSGCEFDRGIFLIFIESYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVD 180
EEMKLSGCEFDRGIFLIF+ESY KFELYDEV+GIVK MEDEYRIKPDTRFYNVLLNVLVD
Sbjct: 121 EEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVD 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSHGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPS+GLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTTIMQGYIE GNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEA
Sbjct: 241 FTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAV 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE 360
+EGFRPDQFTYNTLVNGLCK+GHA+HAMEVVDAMLLGG DPDIYTYNSLISGLCKLGEIE
Sbjct: 301 SEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
EAVKILDQMVSRDCSPNAVTYN IISSLCKENRV+EATEIARLLTSKG+LPDVCTFNSLI
Sbjct: 361 EAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLI 420
Query: 421 QGLCLSSNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELSGCA 480
QGLCLSSNH++AM+LFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMEL+GCA
Sbjct: 421 QGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCA 480
Query: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHL 540
RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAA L
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQL 540
Query: 541 MDQMIMEGLKPDKFTYNSLLTHFCRTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCK 600
MDQMIMEGL+PDKFTYNSLLTHFC+TGDIKKAADIVQTMTSSGCNPDIVTY TLISGLCK
Sbjct: 541 MDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCK 600
Query: 601 VGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAIRLFREMLEKADPPDAIT 660
GRVQVASRLLRSIQMKGMVLTP AYNPVIQALFKRNRTHEA+RLFREML+K++PPDAIT
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAIT 660
Query: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSLEDTLVKLVDMI 720
YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLS++DTLVKLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMI 720
Query: 721 MEKAKFSESEISTIRGFLKIRKFQDALSTLGGILDDMYPRRSHRGR 762
MEKAKFSE EISTIRGFLKIRKFQDALSTLGGILDDMYPRRS+RGR
Sbjct: 721 MEKAKFSEREISTIRGFLKIRKFQDALSTLGGILDDMYPRRSYRGR 766
BLAST of HG10017149 vs. NCBI nr
Match:
XP_022143855.1 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic [Momordica charantia])
HSP 1 Score: 1429.5 bits (3699), Expect = 0.0e+00
Identity = 712/766 (92.95%), Postives = 741/766 (96.74%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHAPLSFSYKPISNSSIFFSASVSDQLASS-----SSSSPNVHHLPP 60
MAFTCVKCYPWSLPHAPLSFS KPISNSSIFFS SVSDQLASS +SSSPN+ HLPP
Sbjct: 1 MAFTCVKCYPWSLPHAPLSFSSKPISNSSIFFSTSVSDQLASSYSSNLASSSPNL-HLPP 60
Query: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
DFTPKQL+ETLRRQTDEV+ALRVFNWASKQPNFVP+SSVYEEILRKLGKAGSFE MRRVL
Sbjct: 61 DFTPKQLLETLRRQTDEVSALRVFNWASKQPNFVPNSSVYEEILRKLGKAGSFECMRRVL 120
Query: 121 EEMKLSGCEFDRGIFLIFIESYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVD 180
EE+KLSGC+ DRGIFLIF+ESYAKFELYDEVM IVK ME EYRIKPDTRFYNVLLNVLVD
Sbjct: 121 EEIKLSGCDVDRGIFLIFVESYAKFELYDEVMDIVKVMEYEYRIKPDTRFYNVLLNVLVD 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSHGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQ+RPAILMMEEMP++GLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMPNYGLSPDETT 240
Query: 241 FTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTT+MQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA
Sbjct: 241 FTTLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE 360
NEGFRPDQFTYNTLVNGLCKVGHA+HAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE
Sbjct: 301 NEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKG+LPDVCTFNSLI
Sbjct: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGILPDVCTFNSLI 420
Query: 421 QGLCLSSNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELSGCA 480
QGLCLS NHRNAMELFEEMKGKGC PDEFTYNMLIDSLCSSR+LEEALNLLKEME SGCA
Sbjct: 421 QGLCLSGNHRNAMELFEEMKGKGCHPDEFTYNMLIDSLCSSRRLEEALNLLKEMESSGCA 480
Query: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHL 540
RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKS+RVEDAAHL
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSRRVEDAAHL 540
Query: 541 MDQMIMEGLKPDKFTYNSLLTHFCRTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCK 600
MDQMIMEGLKPDKFTYNSLLTHFC+ GDI+KAADIVQTMTSSGCNPDIVTYGTLI GLC+
Sbjct: 541 MDQMIMEGLKPDKFTYNSLLTHFCKAGDIQKAADIVQTMTSSGCNPDIVTYGTLIGGLCR 600
Query: 601 VGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAIRLFREMLEKADPPDAIT 660
GR+QVASRLLRSIQMKGMVLTPQAYNP+IQALFKRNR HEA+RLFREMLEKADPPDA+T
Sbjct: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPIIQALFKRNRNHEAMRLFREMLEKADPPDAVT 660
Query: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSLEDTLVKLVDMI 720
YKIVYRGLCNGGGPIGEAVDFTVEMIERG IPEFSSF MLAEGLCTL+++DTLVKLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGKIPEFSSFAMLAEGLCTLAMDDTLVKLVDMI 720
Query: 721 MEKAKFSESEISTIRGFLKIRKFQDALSTLGGILDDMYPRRSHRGR 762
MEKA FSESEISTIRGFLKIRKFQDALSTL GILD +YPR+S+RGR
Sbjct: 721 MEKANFSESEISTIRGFLKIRKFQDALSTLEGILDSIYPRKSYRGR 765
BLAST of HG10017149 vs. NCBI nr
Match:
KAG6595306.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1406.3 bits (3639), Expect = 0.0e+00
Identity = 703/766 (91.78%), Postives = 728/766 (95.04%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHAPLSFSYKPISNSSIFFSASVSDQLAS-----SSSSSPNVHHLPP 60
MAFTCVKCYPWSLPH+PLSF KPISNSSIFFS SVSDQLAS SSSSSPNVHHLPP
Sbjct: 1 MAFTCVKCYPWSLPHSPLSFPSKPISNSSIFFSNSVSDQLASSSSSNSSSSSPNVHHLPP 60
Query: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
DFTPKQLIETLRRQTDEV+ALRVFNWASKQ NFVPSSSVYEEILRKLGK GSFEYMRRVL
Sbjct: 61 DFTPKQLIETLRRQTDEVSALRVFNWASKQRNFVPSSSVYEEILRKLGKVGSFEYMRRVL 120
Query: 121 EEMKLSGCEFDRGIFLIFIESYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVD 180
EEMK+SGCE DRGIFLIF+ESYA FELYDEVM IVK MEDEYRIKPDTRFYNVLLNVLVD
Sbjct: 121 EEMKVSGCEIDRGIFLIFVESYANFELYDEVMNIVKVMEDEYRIKPDTRFYNVLLNVLVD 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSHGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHDV+TFNILI ALCKAHQ+RPAILMMEEMPS+GLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDVTTFNILINALCKAHQIRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTTIMQGYIEEGN DGALRIKEQMVEYGC CTDVTVNVLINGFCKQGRIDQALSFIQEA
Sbjct: 241 FTTIMQGYIEEGNFDGALRIKEQMVEYGCSCTDVTVNVLINGFCKQGRIDQALSFIQEAV 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE 360
NEGF PDQFTYNTLVNGLCKVGH +HAMEVVDAMLL G DPDIYTYNSLISGLCKLGEIE
Sbjct: 301 NEGFCPDQFTYNTLVNGLCKVGHPKHAMEVVDAMLLEGLDPDIYTYNSLISGLCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
EAVK+LDQMVSRDCSPN+VTYN +ISSLCKENRVEEATEIARLLTSKG+LPDVCTFNSLI
Sbjct: 361 EAVKLLDQMVSRDCSPNSVTYNILISSLCKENRVEEATEIARLLTSKGILPDVCTFNSLI 420
Query: 421 QGLCLSSNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELSGCA 480
QGLC+SS+HRNAM+LFEEMKGKGCRPDEFTYNMLI SLCSS KL EALNLLKEME SGCA
Sbjct: 421 QGLCMSSSHRNAMDLFEEMKGKGCRPDEFTYNMLIGSLCSSGKLGEALNLLKEMETSGCA 480
Query: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHL 540
RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYN LIDGLCKS+RVEDAAHL
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNILIDGLCKSRRVEDAAHL 540
Query: 541 MDQMIMEGLKPDKFTYNSLLTHFCRTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCK 600
MDQMIMEGLKPDKFTYNSLLTHFC+TGDIKKAADIVQTM SSGC+PDIVTYGTLI GLCK
Sbjct: 541 MDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTMASSGCDPDIVTYGTLIGGLCK 600
Query: 601 VGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAIRLFREMLEKADPPDAIT 660
GRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRT EA+RLFREM EKA PPDAIT
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTLEAMRLFREMSEKAAPPDAIT 660
Query: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSLEDTLVKLVDMI 720
YKIVYRGLCNGGGPIGEAVDFTVEMIE+GNIPE SSFVMLAEGLCTL +EDTLVKLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIEKGNIPEISSFVMLAEGLCTLGMEDTLVKLVDMI 720
Query: 721 MEKAKFSESEISTIRGFLKIRKFQDALSTLGGILDDMYPRRSHRGR 762
MEKAKF ESEISTIRGFLKIRKF DALSTLGGILDD+YPR+++RGR
Sbjct: 721 MEKAKFLESEISTIRGFLKIRKFHDALSTLGGILDDLYPRKAYRGR 766
BLAST of HG10017149 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 1062.8 bits (2747), Expect = 1.9e-309
Identity = 519/764 (67.93%), Postives = 645/764 (84.42%), Query Frame = 0
Query: 1 MAF-TCVKCYPWSLPHAPLSFSYKPISNSSIFFSASVSDQLASSSSSSPNVHHLPPDFTP 60
MAF +C+K YP+S+ A ++ + FS +++ ++ S +SP H T
Sbjct: 1 MAFSSCLKFYPFSISQA--------VTLTHHSFSLNLTPPSSTISFASP--HSAALSSTD 60
Query: 61 KQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMK 120
+L+++LR Q D+ AALR+FN ASK+PNF P ++YEEIL +LG++GSF+ M+++LE+MK
Sbjct: 61 VKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMK 120
Query: 121 LSGCEFDRGIFLIFIESYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVDANKL 180
S CE FLI IESYA+FEL DE++ +V M DE+ +KPDT FYN +LN+LVD N L
Sbjct: 121 SSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSL 180
Query: 181 KLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSHGLSPDETTFTTI 240
KLVE +H+ M I+ DVSTFN+LIKALC+AHQ+RPAILM+E+MPS+GL PDE TFTT+
Sbjct: 181 KLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTV 240
Query: 241 MQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAAN-EG 300
MQGYIEEG+LDGALRI+EQMVE+GC ++V+VNV+++GFCK+GR++ AL+FIQE +N +G
Sbjct: 241 MQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDG 300
Query: 301 FRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIEEAV 360
F PDQ+T+NTLVNGLCK GH +HA+E++D ML G+DPD+YTYNS+ISGLCKLGE++EAV
Sbjct: 301 FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 360
Query: 361 KILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLIQGL 420
++LDQM++RDCSPN VTYNT+IS+LCKEN+VEEATE+AR+LTSKG+LPDVCTFNSLIQGL
Sbjct: 361 EVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 420
Query: 421 CLSSNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELSGCARNV 480
CL+ NHR AMELFEEM+ KGC PDEFTYNMLIDSLCS KL+EALN+LK+MELSGCAR+V
Sbjct: 421 CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV 480
Query: 481 VIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHLMDQ 540
+ YNTLIDGFCK + EAEEIFDEME+ GVSR+SVTYNTLIDGLCKS+RVEDAA LMDQ
Sbjct: 481 ITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 540
Query: 541 MIMEGLKPDKFTYNSLLTHFCRTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCKVGR 600
MIMEG KPDK+TYNSLLTHFCR GDIKKAADIVQ MTS+GC PDIVTYGTLISGLCK GR
Sbjct: 541 MIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR 600
Query: 601 VQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAIRLFREMLEKAD-PPDAITYK 660
V+VAS+LLRSIQMKG+ LTP AYNPVIQ LF++ +T EAI LFREMLE+ + PPDA++Y+
Sbjct: 601 VEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYR 660
Query: 661 IVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSLEDTLVKLVDMIME 720
IV+RGLCNGGGPI EAVDF VE++E+G +PEFSS MLAEGL TLS+E+TLVKLV+M+M+
Sbjct: 661 IVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQ 720
Query: 721 KAKFSESEISTIRGFLKIRKFQDALSTLGGILDDMYPRRSHRGR 762
KA+FSE E+S ++G LKIRKFQDAL+TLGG+LD PRR++R R
Sbjct: 721 KARFSEEEVSMVKGLLKIRKFQDALATLGGVLDSRQPRRTYRSR 754
BLAST of HG10017149 vs. ExPASy Swiss-Prot
Match:
Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)
HSP 1 Score: 368.6 bits (945), Expect = 1.7e-100
Identity = 196/638 (30.72%), Postives = 328/638 (51.41%), Query Frame = 0
Query: 58 TPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEE 117
TP QL + L + ++ +F+W Q + S VY+ ++ KLG G F+ + R+L +
Sbjct: 77 TPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQ 136
Query: 118 MKLSGCEFDRGIFLIFIESYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVDAN 177
MK G F +F+ + Y K + ++ EM + Y +P + YNV+L +LV N
Sbjct: 137 MKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGN 196
Query: 178 KLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSHGLSPDETTFT 237
K+ + M+ R+I + TF +++KA C +++ A+ ++ +M HG P+ +
Sbjct: 197 CHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQ 256
Query: 238 TIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAANE 297
T++ + ++ AL++ E+M GC T N +I G CK RI++A +
Sbjct: 257 TLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR 316
Query: 298 GFRPDQFTYNTLVNGLCKVGHARHAMEVV------------------------------- 357
GF PD TY L+NGLCK+G A ++
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 358 -DAMLLGGFDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNTIISSLCK 417
D + G PD+ TYNSLI G K G + A+++L M ++ C PN +Y ++ CK
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Query: 418 ENRVEEATEIARLLTSKGVLPDVCTFNSLIQGLCLSSNHRNAMELFEEMKGKGCRPDEFT 477
+++EA + +++ G+ P+ FN LI C A+E+F EM KGC+PD +T
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 478 YNMLIDSLCSSRKLEEALNLLKEMELSGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEME 537
+N LI LC +++ AL LL++M G N V YNTLI+ F + I+EA ++ +EM
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 538 LQGVSRDSVTYNTLIDGLCKSKRVEDAAHLMDQMIMEGLKPDKFTYNSLLTHFCRTGDIK 597
QG D +TYN+LI GLC++ V+ A L ++M+ +G P + N L+ CR+G ++
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 598 KAADIVQTMTSSGCNPDIVTYGTLISGLCKVGRVQVASRLLRSIQMKGMVLTPQAYNPVI 657
+A + + M G PDIVT+ +LI+GLC+ GR++ + R +Q +G+ +N ++
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Query: 658 QALFKRNRTHEAIRLFREMLEKADPPDAITYKIVYRGL 664
L K ++A L E +E P+ T+ I+ + +
Sbjct: 677 SWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
BLAST of HG10017149 vs. ExPASy Swiss-Prot
Match:
Q9CA58 (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana OX=3702 GN=At1g74580 PE=3 SV=1)
HSP 1 Score: 353.2 bits (905), Expect = 7.3e-96
Identity = 216/699 (30.90%), Postives = 335/699 (47.93%), Query Frame = 0
Query: 55 PDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRV 114
P PK + ++ Q D + AL +FN K+ F + S Y ++ KLG G FE M V
Sbjct: 3 PPLLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEV 62
Query: 115 LEEMKLS-GCEFDRGIFLIFIESYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVL 174
L +M+ + G G+++ +++Y + E + + + M D Y +P YN +++VL
Sbjct: 63 LVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSVL 122
Query: 175 VDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSHGLSPDE 234
VD+ + M R I DV +F I +K+ CK + A+ ++ M S G +
Sbjct: 123 VDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNV 182
Query: 235 TTFTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQE 294
+ T++ G+ EE + +M+ G T N L+ CK+G + + + +
Sbjct: 183 VAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDK 242
Query: 295 AANEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGE 354
G P+ FTYN + GLC+ G A+ +V ++ G PD+ TYN+LI GLCK +
Sbjct: 243 VIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSK 302
Query: 355 IEEAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNS 414
+EA L +MV+ P++ TYNT+I+ CK V+ A I G +PD T+ S
Sbjct: 303 FQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRS 362
Query: 415 LIQGLCLSSNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELSG 474
LI GLC A+ LF E GKG +P+ YN LI L + + EA L EM G
Sbjct: 363 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 422
Query: 475 CARNVVIYNTLIDGFCK-----------------------------------NKRIEEAE 534
V +N L++G CK ++E A
Sbjct: 423 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 482
Query: 535 EIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHLMDQMIMEGLKPDKFTYNSLLTHF 594
EI D M GV D TYN+L++GLCK+ + ED M+ +G P+ FT+N LL
Sbjct: 483 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 542
Query: 595 CRTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCKVGRVQVASRLLRSIQ--MKGMVL 654
CR + +A +++ M + NPD VT+GTLI G CK G + A L R ++ K
Sbjct: 543 CRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSS 602
Query: 655 TPQAYNPVIQALFKRNRTHEAIRLFREMLEKADPPDAITYKIVYRGLCNGGGPIGEAVDF 714
TP YN +I A ++ A +LF+EM+++ PD TY+++ G C G + F
Sbjct: 603 TP-TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGN-VNLGYKF 662
Query: 715 TVEMIERGNIPEFSSFVMLAEGLCTLSLEDTLVKLVDMI 716
+EM+E G IP ++ + LC +ED + + +I
Sbjct: 663 LLEMMENGFIPSLTTLGRVINCLC---VEDRVYEAAGII 695
BLAST of HG10017149 vs. ExPASy Swiss-Prot
Match:
Q9SS81 (Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana OX=3702 GN=At3g09060 PE=2 SV=1)
HSP 1 Score: 336.3 bits (861), Expect = 9.2e-91
Identity = 194/682 (28.45%), Postives = 338/682 (49.56%), Query Frame = 0
Query: 54 PPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRR 113
P +PK +++ L+ + + AA +F+ A++ P + S+ VY ILR+L + ++ R
Sbjct: 5 PKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSR 64
Query: 114 VLEEMKLSGCEFDRGIFLIFIESYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVL 173
++E ++ C+ D + L I++Y K + D+ + + K M + + +P R YN LLN
Sbjct: 65 IVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAF 124
Query: 174 VDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSHGLSPDE 233
V+A + VES + + ++ T+N+LIK CK + A ++ M G PD
Sbjct: 125 VEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDV 184
Query: 234 TTFTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQ------------ 293
+++T++ + G LD AL + ++M E G N+LI+GF K+
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDR 244
Query: 294 ------------------------GRIDQALSFIQEAANEGFRPDQFTYNTLVNGLCKVG 353
GR+D L + D +TY++L++GLC G
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAG 304
Query: 354 HARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYN 413
+ A V + + D+ TYN+++ G C+ G+I+E++++ M ++ S N V+YN
Sbjct: 305 NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYN 364
Query: 414 TIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLIQGLCLSSNHRNAMELFEEMKGK 473
+I L + +++EAT I RL+ +KG D T+ I GLC++ A+ + +E++
Sbjct: 365 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 424
Query: 474 GCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELSGCARNVVIYNTLIDGFCKNKRIEEA 533
G D + Y +ID LC ++LEEA NL+KEM G N + N LI G ++ R+ EA
Sbjct: 425 GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA 484
Query: 534 EEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHLMDQMIMEGLKPDKFTYNSLLTH 593
EM G V+YN LI GLCK+ + +A+ + +M+ G KPD TY+ LL
Sbjct: 485 SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCG 544
Query: 594 FCRTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCKVGRVQVASRLLRSIQMKGMVLT 653
CR I A ++ SG D++ + LI GLC VG++ A ++ +++ +
Sbjct: 545 LCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 604
Query: 654 PQAYNPVIQALFKRNRTHEAIRLFREMLEKADPPDAITYKIVYRGLCNGGGPIGEAVDFT 700
YN +++ FK ++ A ++ M + PD I+Y + +GLC G + A++F
Sbjct: 605 LVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRG-VSYAMEFF 664
BLAST of HG10017149 vs. ExPASy Swiss-Prot
Match:
Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 327.4 bits (838), Expect = 4.3e-88
Identity = 207/741 (27.94%), Postives = 351/741 (47.37%), Query Frame = 0
Query: 25 ISNSSIFFSASVSDQLASSSSSS------PNVHHLPPDFTPKQLIE-TLRRQTDEVAALR 84
I S F++S SD L + + + +HHL +FTP+ L+ Q D+ L+
Sbjct: 8 IRRSLSTFASSPSDSLLADKALTFLKRHPYQLHHLSANFTPEAASNLLLKSQNDQALILK 67
Query: 85 VFNWASKQPNF-VPSSSVYEEILRKL--------------GKAGSFEYMRRVLEEMK--L 144
NWA+ F + + IL K K EY V + ++
Sbjct: 68 FLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETY 127
Query: 145 SGCEFDRGIFLIFIESYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVDANK-L 204
C +F + ++SY++ L D+ + IV + + P YN +L+ + + + +
Sbjct: 128 DLCYSTSSVFDLVVKSYSRLSLIDKALSIV-HLAQAHGFMPGVLSYNAVLDATIRSKRNI 187
Query: 205 KLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSHGLSPDETTFTTI 264
E+ M+ ++ +V T+NILI+ C A + A+ + ++M + G P+ T+ T+
Sbjct: 188 SFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTL 247
Query: 265 MQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAANEGF 324
+ GY + +D ++ M G ++ NV+ING C++GR+ + + E G+
Sbjct: 248 IDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGY 307
Query: 325 RPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIEEAVK 384
D+ TYNTL+ G CK G+ A+ + ML G P + TY SLI +CK G + A++
Sbjct: 308 SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME 367
Query: 385 ILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLIQGLC 444
LDQM R PN TY T++ ++ + EA + R + G P V T+N+LI G C
Sbjct: 368 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHC 427
Query: 445 LSSNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELSGCARNVV 504
++ +A+ + E+MK KG PD VV
Sbjct: 428 VTGKMEDAIAVLEDMKEKGLSPD-----------------------------------VV 487
Query: 505 IYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHLMDQM 564
Y+T++ GFC++ ++EA + EM +G+ D++TY++LI G C+ +R ++A L ++M
Sbjct: 488 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 547
Query: 565 IMEGLKPDKFTYNSLLTHFCRTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCKVGRV 624
+ GL PD+FTY +L+ +C GD++KA + M G PD+VTY LI+GL K R
Sbjct: 548 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 607
Query: 625 QVASRLLRSIQMKGMVLTPQAYNPVIQ-----------ALFK----RNRTHEAIRLFREM 684
+ A RLL + + V + Y+ +I+ +L K + EA ++F M
Sbjct: 608 REAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM 667
Query: 685 LEKADPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSL 726
L K PD Y I+ G C G I +A EM++ G + + + L + L
Sbjct: 668 LGKNHKPDGTAYNIMIHGHCR-AGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGK 711
BLAST of HG10017149 vs. ExPASy TrEMBL
Match:
A0A5A7SQ06 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00010 PE=4 SV=1)
HSP 1 Score: 1458.0 bits (3773), Expect = 0.0e+00
Identity = 729/766 (95.17%), Postives = 746/766 (97.39%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHAPLSFSYKPISNSSIFFSASVSDQLASSS-----SSSPNVHHLPP 60
MAFTCVKCYPWSLPH PLSFS KPISNSSIFFSASVSDQLASSS SSSPNVH LPP
Sbjct: 1 MAFTCVKCYPWSLPHVPLSFSSKPISNSSIFFSASVSDQLASSSSSNFTSSSPNVHQLPP 60
Query: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL
Sbjct: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
Query: 121 EEMKLSGCEFDRGIFLIFIESYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVD 180
EEMKLSGCEFDRGIFLIF+ESY KFELYDEVMGIVK MEDEYRIKPDTRFYNVLLNVLVD
Sbjct: 121 EEMKLSGCEFDRGIFLIFVESYGKFELYDEVMGIVKVMEDEYRIKPDTRFYNVLLNVLVD 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSHGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPS+GLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTTIMQGYIE GNLDGALRIKEQM+EYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEA
Sbjct: 241 FTTIMQGYIEGGNLDGALRIKEQMIEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAV 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE 360
NEGFRPDQFTYNTLVNGLCKVGHA+HAMEVVDAMLLGG DPDIYTYNSLISG CKLGEIE
Sbjct: 301 NEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGFCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI
Sbjct: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
Query: 421 QGLCLSSNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELSGCA 480
QGLCLSSNH+NAMELFEEMKGKGCRPDEFTYNMLI+SLCSSRKLEEALNLLKEMELSGCA
Sbjct: 421 QGLCLSSNHKNAMELFEEMKGKGCRPDEFTYNMLIESLCSSRKLEEALNLLKEMELSGCA 480
Query: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHL 540
RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYN LIDGLCKSKRVEDAA L
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNILIDGLCKSKRVEDAAQL 540
Query: 541 MDQMIMEGLKPDKFTYNSLLTHFCRTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCK 600
MDQMIMEGL+PDKFTYNSLLTHFC+TGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCK
Sbjct: 541 MDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCK 600
Query: 601 VGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAIRLFREMLEKADPPDAIT 660
GRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEA+RLFREMLEK++PPDAIT
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKSEPPDAIT 660
Query: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSLEDTLVKLVDMI 720
YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPE+SSF+MLAEGL TLS++DTL+KLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEYSSFIMLAEGLYTLSMDDTLLKLVDMI 720
Query: 721 MEKAKFSESEISTIRGFLKIRKFQDALSTLGGILDDMYPRRSHRGR 762
MEKAKF E EISTIRGFLKIRKFQDALSTLGGILDDMYPRRS+RGR
Sbjct: 721 MEKAKFKEREISTIRGFLKIRKFQDALSTLGGILDDMYPRRSYRGR 766
BLAST of HG10017149 vs. ExPASy TrEMBL
Match:
A0A1S3BHC3 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490047 PE=4 SV=1)
HSP 1 Score: 1458.0 bits (3773), Expect = 0.0e+00
Identity = 729/766 (95.17%), Postives = 746/766 (97.39%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHAPLSFSYKPISNSSIFFSASVSDQLASSS-----SSSPNVHHLPP 60
MAFTCVKCYPWSLPH PLSFS KPISNSSIFFSASVSDQLASSS SSSPNVH LPP
Sbjct: 1 MAFTCVKCYPWSLPHVPLSFSSKPISNSSIFFSASVSDQLASSSSSNFTSSSPNVHQLPP 60
Query: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL
Sbjct: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
Query: 121 EEMKLSGCEFDRGIFLIFIESYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVD 180
EEMKLSGCEFDRGIFLIF+ESY KFELYDEVMGIVK MEDEYRIKPDTRFYNVLLNVLVD
Sbjct: 121 EEMKLSGCEFDRGIFLIFVESYGKFELYDEVMGIVKVMEDEYRIKPDTRFYNVLLNVLVD 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSHGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPS+GLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTTIMQGYIE GNLDGALRIKEQM+EYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEA
Sbjct: 241 FTTIMQGYIEGGNLDGALRIKEQMIEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAV 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE 360
NEGFRPDQFTYNTLVNGLCKVGHA+HAMEVVDAMLLGG DPDIYTYNSLISG CKLGEIE
Sbjct: 301 NEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGFCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI
Sbjct: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
Query: 421 QGLCLSSNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELSGCA 480
QGLCLSSNH+NAMELFEEMKGKGCRPDEFTYNMLI+SLCSSRKLEEALNLLKEMELSGCA
Sbjct: 421 QGLCLSSNHKNAMELFEEMKGKGCRPDEFTYNMLIESLCSSRKLEEALNLLKEMELSGCA 480
Query: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHL 540
RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYN LIDGLCKSKRVEDAA L
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNILIDGLCKSKRVEDAAQL 540
Query: 541 MDQMIMEGLKPDKFTYNSLLTHFCRTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCK 600
MDQMIMEGL+PDKFTYNSLLTHFC+TGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCK
Sbjct: 541 MDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCK 600
Query: 601 VGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAIRLFREMLEKADPPDAIT 660
GRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEA+RLFREMLEK++PPDAIT
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKSEPPDAIT 660
Query: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSLEDTLVKLVDMI 720
YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPE+SSF+MLAEGL TLS++DTL+KLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEYSSFIMLAEGLYTLSMDDTLLKLVDMI 720
Query: 721 MEKAKFSESEISTIRGFLKIRKFQDALSTLGGILDDMYPRRSHRGR 762
MEKAKF E EISTIRGFLKIRKFQDALSTLGGILDDMYPRRS+RGR
Sbjct: 721 MEKAKFKEREISTIRGFLKIRKFQDALSTLGGILDDMYPRRSYRGR 766
BLAST of HG10017149 vs. ExPASy TrEMBL
Match:
A0A6J1CPZ4 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111013667 PE=4 SV=1)
HSP 1 Score: 1429.5 bits (3699), Expect = 0.0e+00
Identity = 712/766 (92.95%), Postives = 741/766 (96.74%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHAPLSFSYKPISNSSIFFSASVSDQLASS-----SSSSPNVHHLPP 60
MAFTCVKCYPWSLPHAPLSFS KPISNSSIFFS SVSDQLASS +SSSPN+ HLPP
Sbjct: 1 MAFTCVKCYPWSLPHAPLSFSSKPISNSSIFFSTSVSDQLASSYSSNLASSSPNL-HLPP 60
Query: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
DFTPKQL+ETLRRQTDEV+ALRVFNWASKQPNFVP+SSVYEEILRKLGKAGSFE MRRVL
Sbjct: 61 DFTPKQLLETLRRQTDEVSALRVFNWASKQPNFVPNSSVYEEILRKLGKAGSFECMRRVL 120
Query: 121 EEMKLSGCEFDRGIFLIFIESYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVD 180
EE+KLSGC+ DRGIFLIF+ESYAKFELYDEVM IVK ME EYRIKPDTRFYNVLLNVLVD
Sbjct: 121 EEIKLSGCDVDRGIFLIFVESYAKFELYDEVMDIVKVMEYEYRIKPDTRFYNVLLNVLVD 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSHGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQ+RPAILMMEEMP++GLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMPNYGLSPDETT 240
Query: 241 FTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTT+MQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA
Sbjct: 241 FTTLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE 360
NEGFRPDQFTYNTLVNGLCKVGHA+HAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE
Sbjct: 301 NEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKG+LPDVCTFNSLI
Sbjct: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGILPDVCTFNSLI 420
Query: 421 QGLCLSSNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELSGCA 480
QGLCLS NHRNAMELFEEMKGKGC PDEFTYNMLIDSLCSSR+LEEALNLLKEME SGCA
Sbjct: 421 QGLCLSGNHRNAMELFEEMKGKGCHPDEFTYNMLIDSLCSSRRLEEALNLLKEMESSGCA 480
Query: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHL 540
RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKS+RVEDAAHL
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSRRVEDAAHL 540
Query: 541 MDQMIMEGLKPDKFTYNSLLTHFCRTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCK 600
MDQMIMEGLKPDKFTYNSLLTHFC+ GDI+KAADIVQTMTSSGCNPDIVTYGTLI GLC+
Sbjct: 541 MDQMIMEGLKPDKFTYNSLLTHFCKAGDIQKAADIVQTMTSSGCNPDIVTYGTLIGGLCR 600
Query: 601 VGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAIRLFREMLEKADPPDAIT 660
GR+QVASRLLRSIQMKGMVLTPQAYNP+IQALFKRNR HEA+RLFREMLEKADPPDA+T
Sbjct: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPIIQALFKRNRNHEAMRLFREMLEKADPPDAVT 660
Query: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSLEDTLVKLVDMI 720
YKIVYRGLCNGGGPIGEAVDFTVEMIERG IPEFSSF MLAEGLCTL+++DTLVKLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGKIPEFSSFAMLAEGLCTLAMDDTLVKLVDMI 720
Query: 721 MEKAKFSESEISTIRGFLKIRKFQDALSTLGGILDDMYPRRSHRGR 762
MEKA FSESEISTIRGFLKIRKFQDALSTL GILD +YPR+S+RGR
Sbjct: 721 MEKANFSESEISTIRGFLKIRKFQDALSTLEGILDSIYPRKSYRGR 765
BLAST of HG10017149 vs. ExPASy TrEMBL
Match:
A0A6J1I5N1 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111471244 PE=4 SV=1)
HSP 1 Score: 1406.0 bits (3638), Expect = 0.0e+00
Identity = 702/766 (91.64%), Postives = 728/766 (95.04%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHAPLSFSYKPISNSSIFFSASVSDQLAS-----SSSSSPNVHHLPP 60
MAFTCVKCYPWSLPH+PLSF KPISNSSIFFS SVSDQLAS SSSSSPNVHHLPP
Sbjct: 1 MAFTCVKCYPWSLPHSPLSFPSKPISNSSIFFSNSVSDQLASSSSSNSSSSSPNVHHLPP 60
Query: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
DFTPKQLIETLRRQTDEV+ALR+FNWASKQ NFVPSSSVYEEILRKLGK GSFEYMRRVL
Sbjct: 61 DFTPKQLIETLRRQTDEVSALRIFNWASKQRNFVPSSSVYEEILRKLGKVGSFEYMRRVL 120
Query: 121 EEMKLSGCEFDRGIFLIFIESYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVD 180
EEMKLSGCE DRGIFLIF+ESYA FELYDEVM IVK MEDEYRIKPDTRFYNVLLNVLVD
Sbjct: 121 EEMKLSGCEIDRGIFLIFVESYANFELYDEVMNIVKVMEDEYRIKPDTRFYNVLLNVLVD 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSHGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHDV+TFNILI ALCKAHQ+RPAILMMEEMPS+GLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDVTTFNILINALCKAHQIRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTTIMQGYIEEGN DGALRIKEQMVEYGC CTDVTVNVLINGFCKQGRIDQALSFIQEA
Sbjct: 241 FTTIMQGYIEEGNFDGALRIKEQMVEYGCSCTDVTVNVLINGFCKQGRIDQALSFIQEAV 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE 360
NEGF PDQFTYNTLVNGLCKVGH +HAMEVVDAMLL G DPDIYTYNSLISGLCKLGEIE
Sbjct: 301 NEGFCPDQFTYNTLVNGLCKVGHPKHAMEVVDAMLLEGLDPDIYTYNSLISGLCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
EAVK+LDQMVSRDCSPN+VTYN +ISSLCKENRVEEATEIARLLTSKG+LPDVCTFNSLI
Sbjct: 361 EAVKLLDQMVSRDCSPNSVTYNILISSLCKENRVEEATEIARLLTSKGILPDVCTFNSLI 420
Query: 421 QGLCLSSNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELSGCA 480
QGLC+SS+HRNAM+LFEEMKGKGCRPDEFTYNMLI SLCSS KL EALNLLKEME SGCA
Sbjct: 421 QGLCMSSSHRNAMDLFEEMKGKGCRPDEFTYNMLIGSLCSSGKLVEALNLLKEMETSGCA 480
Query: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHL 540
RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYN LIDGLCKS+RVEDAAHL
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNILIDGLCKSRRVEDAAHL 540
Query: 541 MDQMIMEGLKPDKFTYNSLLTHFCRTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCK 600
MDQMIMEGLKPDKFTYNSLLTHFC+TGDIKKAADIVQTM SSGC+PDIVTYGTLI GLC+
Sbjct: 541 MDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTMASSGCDPDIVTYGTLIGGLCR 600
Query: 601 VGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAIRLFREMLEKADPPDAIT 660
GRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRT EA+RLFREM EKA PPDAIT
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTLEAMRLFREMSEKAAPPDAIT 660
Query: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSLEDTLVKLVDMI 720
YKIVYRGLCNGGGPIGEAVDFTVEMIE+GNIPE SSFVMLAEGLCTL +EDTLVKLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIEKGNIPEISSFVMLAEGLCTLGMEDTLVKLVDMI 720
Query: 721 MEKAKFSESEISTIRGFLKIRKFQDALSTLGGILDDMYPRRSHRGR 762
MEKAKF ESEISTIRGFLKIRKF DALSTLGGILDD+YPR+++RGR
Sbjct: 721 MEKAKFLESEISTIRGFLKIRKFHDALSTLGGILDDLYPRKTYRGR 766
BLAST of HG10017149 vs. ExPASy TrEMBL
Match:
A0A6J1HFU3 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111463562 PE=4 SV=1)
HSP 1 Score: 1405.2 bits (3636), Expect = 0.0e+00
Identity = 702/766 (91.64%), Postives = 727/766 (94.91%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHAPLSFSYKPISNSSIFFSASVSDQLAS-----SSSSSPNVHHLPP 60
MAFTCVKCYPWSLPH+PLSF KPISNSSIFFS SVSDQLAS SSSSSPNVHHLPP
Sbjct: 1 MAFTCVKCYPWSLPHSPLSFPSKPISNSSIFFSNSVSDQLASSSSSNSSSSSPNVHHLPP 60
Query: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
DFTPKQLIETLRRQTDEV+ALR+FNWASKQ NFVPSSSVYEEILRKLGK GSFEYMRRVL
Sbjct: 61 DFTPKQLIETLRRQTDEVSALRIFNWASKQRNFVPSSSVYEEILRKLGKVGSFEYMRRVL 120
Query: 121 EEMKLSGCEFDRGIFLIFIESYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVD 180
EEMKLSGCE DRGIFLIF+ESYA FELYDEVM IVK MEDEYRIKPDTRFYNVLLNVLVD
Sbjct: 121 EEMKLSGCEIDRGIFLIFVESYANFELYDEVMNIVKVMEDEYRIKPDTRFYNVLLNVLVD 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSHGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHDV+TFNILI ALCKAHQ+RPAILMMEEMPS+GLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDVTTFNILINALCKAHQIRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTTIMQGYIEEGN DGALRIKEQMVEYGC CTDVTVNVLINGFCKQGRIDQALSFIQEA
Sbjct: 241 FTTIMQGYIEEGNFDGALRIKEQMVEYGCSCTDVTVNVLINGFCKQGRIDQALSFIQEAV 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE 360
NEGF PDQFTYNTLVNGLCKVGH +HAMEVVDAMLL G DPDIYTYNSLISGLCKLGEIE
Sbjct: 301 NEGFCPDQFTYNTLVNGLCKVGHPKHAMEVVDAMLLEGLDPDIYTYNSLISGLCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
EAVK+LDQMVSRDCSPN+VTYN +ISSLCKENRVEEATEIARLLTSKG+LPDVCTFNSLI
Sbjct: 361 EAVKLLDQMVSRDCSPNSVTYNILISSLCKENRVEEATEIARLLTSKGILPDVCTFNSLI 420
Query: 421 QGLCLSSNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELSGCA 480
QGLC+SS+HRNAM+LFEEMKGKGCRPDEFTYNMLI SLCSS KL EALNLLKEME SGCA
Sbjct: 421 QGLCMSSSHRNAMDLFEEMKGKGCRPDEFTYNMLIGSLCSSGKLGEALNLLKEMETSGCA 480
Query: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHL 540
RNVVIYNTLIDGFCKNKR EEAEEIFDEMELQGVSRDSVTYN LIDGLCKS+RVEDAAHL
Sbjct: 481 RNVVIYNTLIDGFCKNKRTEEAEEIFDEMELQGVSRDSVTYNILIDGLCKSRRVEDAAHL 540
Query: 541 MDQMIMEGLKPDKFTYNSLLTHFCRTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCK 600
MDQMIMEGLKPDKFTYNSLLTHFC+TGDIKKAADIVQTM SSGC+PDIVTYGTLI GLCK
Sbjct: 541 MDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTMASSGCDPDIVTYGTLIGGLCK 600
Query: 601 VGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAIRLFREMLEKADPPDAIT 660
GRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRT EA+RLFREM EKA PPDAIT
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTLEAMRLFREMSEKAAPPDAIT 660
Query: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSLEDTLVKLVDMI 720
YKIVYRGLCNGGGPIGEAVDFTVEMIE+GNIPE SSFVMLAEGLCTL +EDTLVKLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIEKGNIPEISSFVMLAEGLCTLGMEDTLVKLVDMI 720
Query: 721 MEKAKFSESEISTIRGFLKIRKFQDALSTLGGILDDMYPRRSHRGR 762
MEKAKF ESEISTIRGFLKIRKF DALSTLGGILDD+YPR+++RGR
Sbjct: 721 MEKAKFLESEISTIRGFLKIRKFHDALSTLGGILDDLYPRKAYRGR 766
BLAST of HG10017149 vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 1062.8 bits (2747), Expect = 1.3e-310
Identity = 519/764 (67.93%), Postives = 645/764 (84.42%), Query Frame = 0
Query: 1 MAF-TCVKCYPWSLPHAPLSFSYKPISNSSIFFSASVSDQLASSSSSSPNVHHLPPDFTP 60
MAF +C+K YP+S+ A ++ + FS +++ ++ S +SP H T
Sbjct: 1 MAFSSCLKFYPFSISQA--------VTLTHHSFSLNLTPPSSTISFASP--HSAALSSTD 60
Query: 61 KQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMK 120
+L+++LR Q D+ AALR+FN ASK+PNF P ++YEEIL +LG++GSF+ M+++LE+MK
Sbjct: 61 VKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMK 120
Query: 121 LSGCEFDRGIFLIFIESYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVDANKL 180
S CE FLI IESYA+FEL DE++ +V M DE+ +KPDT FYN +LN+LVD N L
Sbjct: 121 SSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSL 180
Query: 181 KLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSHGLSPDETTFTTI 240
KLVE +H+ M I+ DVSTFN+LIKALC+AHQ+RPAILM+E+MPS+GL PDE TFTT+
Sbjct: 181 KLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTV 240
Query: 241 MQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAAN-EG 300
MQGYIEEG+LDGALRI+EQMVE+GC ++V+VNV+++GFCK+GR++ AL+FIQE +N +G
Sbjct: 241 MQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDG 300
Query: 301 FRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIEEAV 360
F PDQ+T+NTLVNGLCK GH +HA+E++D ML G+DPD+YTYNS+ISGLCKLGE++EAV
Sbjct: 301 FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 360
Query: 361 KILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLIQGL 420
++LDQM++RDCSPN VTYNT+IS+LCKEN+VEEATE+AR+LTSKG+LPDVCTFNSLIQGL
Sbjct: 361 EVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 420
Query: 421 CLSSNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELSGCARNV 480
CL+ NHR AMELFEEM+ KGC PDEFTYNMLIDSLCS KL+EALN+LK+MELSGCAR+V
Sbjct: 421 CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV 480
Query: 481 VIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHLMDQ 540
+ YNTLIDGFCK + EAEEIFDEME+ GVSR+SVTYNTLIDGLCKS+RVEDAA LMDQ
Sbjct: 481 ITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 540
Query: 541 MIMEGLKPDKFTYNSLLTHFCRTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCKVGR 600
MIMEG KPDK+TYNSLLTHFCR GDIKKAADIVQ MTS+GC PDIVTYGTLISGLCK GR
Sbjct: 541 MIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR 600
Query: 601 VQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAIRLFREMLEKAD-PPDAITYK 660
V+VAS+LLRSIQMKG+ LTP AYNPVIQ LF++ +T EAI LFREMLE+ + PPDA++Y+
Sbjct: 601 VEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYR 660
Query: 661 IVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSLEDTLVKLVDMIME 720
IV+RGLCNGGGPI EAVDF VE++E+G +PEFSS MLAEGL TLS+E+TLVKLV+M+M+
Sbjct: 661 IVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQ 720
Query: 721 KAKFSESEISTIRGFLKIRKFQDALSTLGGILDDMYPRRSHRGR 762
KA+FSE E+S ++G LKIRKFQDAL+TLGG+LD PRR++R R
Sbjct: 721 KARFSEEEVSMVKGLLKIRKFQDALATLGGVLDSRQPRRTYRSR 754
BLAST of HG10017149 vs. TAIR 10
Match:
AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 368.6 bits (945), Expect = 1.2e-101
Identity = 196/638 (30.72%), Postives = 328/638 (51.41%), Query Frame = 0
Query: 58 TPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEE 117
TP QL + L + ++ +F+W Q + S VY+ ++ KLG G F+ + R+L +
Sbjct: 77 TPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQ 136
Query: 118 MKLSGCEFDRGIFLIFIESYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVDAN 177
MK G F +F+ + Y K + ++ EM + Y +P + YNV+L +LV N
Sbjct: 137 MKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGN 196
Query: 178 KLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSHGLSPDETTFT 237
K+ + M+ R+I + TF +++KA C +++ A+ ++ +M HG P+ +
Sbjct: 197 CHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQ 256
Query: 238 TIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAANE 297
T++ + ++ AL++ E+M GC T N +I G CK RI++A +
Sbjct: 257 TLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR 316
Query: 298 GFRPDQFTYNTLVNGLCKVGHARHAMEVV------------------------------- 357
GF PD TY L+NGLCK+G A ++
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 358 -DAMLLGGFDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNTIISSLCK 417
D + G PD+ TYNSLI G K G + A+++L M ++ C PN +Y ++ CK
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Query: 418 ENRVEEATEIARLLTSKGVLPDVCTFNSLIQGLCLSSNHRNAMELFEEMKGKGCRPDEFT 477
+++EA + +++ G+ P+ FN LI C A+E+F EM KGC+PD +T
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 478 YNMLIDSLCSSRKLEEALNLLKEMELSGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEME 537
+N LI LC +++ AL LL++M G N V YNTLI+ F + I+EA ++ +EM
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 538 LQGVSRDSVTYNTLIDGLCKSKRVEDAAHLMDQMIMEGLKPDKFTYNSLLTHFCRTGDIK 597
QG D +TYN+LI GLC++ V+ A L ++M+ +G P + N L+ CR+G ++
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 598 KAADIVQTMTSSGCNPDIVTYGTLISGLCKVGRVQVASRLLRSIQMKGMVLTPQAYNPVI 657
+A + + M G PDIVT+ +LI+GLC+ GR++ + R +Q +G+ +N ++
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Query: 658 QALFKRNRTHEAIRLFREMLEKADPPDAITYKIVYRGL 664
L K ++A L E +E P+ T+ I+ + +
Sbjct: 677 SWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
BLAST of HG10017149 vs. TAIR 10
Match:
AT1G74580.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 353.2 bits (905), Expect = 5.2e-97
Identity = 216/699 (30.90%), Postives = 335/699 (47.93%), Query Frame = 0
Query: 55 PDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRV 114
P PK + ++ Q D + AL +FN K+ F + S Y ++ KLG G FE M V
Sbjct: 3 PPLLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEV 62
Query: 115 LEEMKLS-GCEFDRGIFLIFIESYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVL 174
L +M+ + G G+++ +++Y + E + + + M D Y +P YN +++VL
Sbjct: 63 LVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSVL 122
Query: 175 VDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSHGLSPDE 234
VD+ + M R I DV +F I +K+ CK + A+ ++ M S G +
Sbjct: 123 VDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNV 182
Query: 235 TTFTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQE 294
+ T++ G+ EE + +M+ G T N L+ CK+G + + + +
Sbjct: 183 VAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDK 242
Query: 295 AANEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGE 354
G P+ FTYN + GLC+ G A+ +V ++ G PD+ TYN+LI GLCK +
Sbjct: 243 VIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSK 302
Query: 355 IEEAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNS 414
+EA L +MV+ P++ TYNT+I+ CK V+ A I G +PD T+ S
Sbjct: 303 FQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRS 362
Query: 415 LIQGLCLSSNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELSG 474
LI GLC A+ LF E GKG +P+ YN LI L + + EA L EM G
Sbjct: 363 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 422
Query: 475 CARNVVIYNTLIDGFCK-----------------------------------NKRIEEAE 534
V +N L++G CK ++E A
Sbjct: 423 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 482
Query: 535 EIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHLMDQMIMEGLKPDKFTYNSLLTHF 594
EI D M GV D TYN+L++GLCK+ + ED M+ +G P+ FT+N LL
Sbjct: 483 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 542
Query: 595 CRTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCKVGRVQVASRLLRSIQ--MKGMVL 654
CR + +A +++ M + NPD VT+GTLI G CK G + A L R ++ K
Sbjct: 543 CRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSS 602
Query: 655 TPQAYNPVIQALFKRNRTHEAIRLFREMLEKADPPDAITYKIVYRGLCNGGGPIGEAVDF 714
TP YN +I A ++ A +LF+EM+++ PD TY+++ G C G + F
Sbjct: 603 TP-TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGN-VNLGYKF 662
Query: 715 TVEMIERGNIPEFSSFVMLAEGLCTLSLEDTLVKLVDMI 716
+EM+E G IP ++ + LC +ED + + +I
Sbjct: 663 LLEMMENGFIPSLTTLGRVINCLC---VEDRVYEAAGII 695
BLAST of HG10017149 vs. TAIR 10
Match:
AT3G09060.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 336.3 bits (861), Expect = 6.6e-92
Identity = 194/682 (28.45%), Postives = 338/682 (49.56%), Query Frame = 0
Query: 54 PPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRR 113
P +PK +++ L+ + + AA +F+ A++ P + S+ VY ILR+L + ++ R
Sbjct: 5 PKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSR 64
Query: 114 VLEEMKLSGCEFDRGIFLIFIESYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVL 173
++E ++ C+ D + L I++Y K + D+ + + K M + + +P R YN LLN
Sbjct: 65 IVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAF 124
Query: 174 VDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSHGLSPDE 233
V+A + VES + + ++ T+N+LIK CK + A ++ M G PD
Sbjct: 125 VEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDV 184
Query: 234 TTFTTIMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQ------------ 293
+++T++ + G LD AL + ++M E G N+LI+GF K+
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDR 244
Query: 294 ------------------------GRIDQALSFIQEAANEGFRPDQFTYNTLVNGLCKVG 353
GR+D L + D +TY++L++GLC G
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAG 304
Query: 354 HARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYN 413
+ A V + + D+ TYN+++ G C+ G+I+E++++ M ++ S N V+YN
Sbjct: 305 NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYN 364
Query: 414 TIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLIQGLCLSSNHRNAMELFEEMKGK 473
+I L + +++EAT I RL+ +KG D T+ I GLC++ A+ + +E++
Sbjct: 365 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 424
Query: 474 GCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELSGCARNVVIYNTLIDGFCKNKRIEEA 533
G D + Y +ID LC ++LEEA NL+KEM G N + N LI G ++ R+ EA
Sbjct: 425 GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA 484
Query: 534 EEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHLMDQMIMEGLKPDKFTYNSLLTH 593
EM G V+YN LI GLCK+ + +A+ + +M+ G KPD TY+ LL
Sbjct: 485 SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCG 544
Query: 594 FCRTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCKVGRVQVASRLLRSIQMKGMVLT 653
CR I A ++ SG D++ + LI GLC VG++ A ++ +++ +
Sbjct: 545 LCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 604
Query: 654 PQAYNPVIQALFKRNRTHEAIRLFREMLEKADPPDAITYKIVYRGLCNGGGPIGEAVDFT 700
YN +++ FK ++ A ++ M + PD I+Y + +GLC G + A++F
Sbjct: 605 LVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRG-VSYAMEFF 664
BLAST of HG10017149 vs. TAIR 10
Match:
AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 327.4 bits (838), Expect = 3.0e-89
Identity = 207/741 (27.94%), Postives = 351/741 (47.37%), Query Frame = 0
Query: 25 ISNSSIFFSASVSDQLASSSSSS------PNVHHLPPDFTPKQLIE-TLRRQTDEVAALR 84
I S F++S SD L + + + +HHL +FTP+ L+ Q D+ L+
Sbjct: 8 IRRSLSTFASSPSDSLLADKALTFLKRHPYQLHHLSANFTPEAASNLLLKSQNDQALILK 67
Query: 85 VFNWASKQPNF-VPSSSVYEEILRKL--------------GKAGSFEYMRRVLEEMK--L 144
NWA+ F + + IL K K EY V + ++
Sbjct: 68 FLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETY 127
Query: 145 SGCEFDRGIFLIFIESYAKFELYDEVMGIVKEMEDEYRIKPDTRFYNVLLNVLVDANK-L 204
C +F + ++SY++ L D+ + IV + + P YN +L+ + + + +
Sbjct: 128 DLCYSTSSVFDLVVKSYSRLSLIDKALSIV-HLAQAHGFMPGVLSYNAVLDATIRSKRNI 187
Query: 205 KLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSHGLSPDETTFTTI 264
E+ M+ ++ +V T+NILI+ C A + A+ + ++M + G P+ T+ T+
Sbjct: 188 SFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTL 247
Query: 265 MQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAANEGF 324
+ GY + +D ++ M G ++ NV+ING C++GR+ + + E G+
Sbjct: 248 IDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGY 307
Query: 325 RPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIEEAVK 384
D+ TYNTL+ G CK G+ A+ + ML G P + TY SLI +CK G + A++
Sbjct: 308 SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME 367
Query: 385 ILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLIQGLC 444
LDQM R PN TY T++ ++ + EA + R + G P V T+N+LI G C
Sbjct: 368 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHC 427
Query: 445 LSSNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELSGCARNVV 504
++ +A+ + E+MK KG PD VV
Sbjct: 428 VTGKMEDAIAVLEDMKEKGLSPD-----------------------------------VV 487
Query: 505 IYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHLMDQM 564
Y+T++ GFC++ ++EA + EM +G+ D++TY++LI G C+ +R ++A L ++M
Sbjct: 488 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 547
Query: 565 IMEGLKPDKFTYNSLLTHFCRTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCKVGRV 624
+ GL PD+FTY +L+ +C GD++KA + M G PD+VTY LI+GL K R
Sbjct: 548 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 607
Query: 625 QVASRLLRSIQMKGMVLTPQAYNPVIQ-----------ALFK----RNRTHEAIRLFREM 684
+ A RLL + + V + Y+ +I+ +L K + EA ++F M
Sbjct: 608 REAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM 667
Query: 685 LEKADPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSL 726
L K PD Y I+ G C G I +A EM++ G + + + L + L
Sbjct: 668 LGKNHKPDGTAYNIMIHGHCR-AGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGK 711
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038881185.1 | 0.0e+00 | 95.69 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic [Benincasa ... | [more] |
XP_008447642.1 | 0.0e+00 | 95.17 | PREDICTED: pentatricopeptide repeat-containing protein At3g53700, chloroplastic ... | [more] |
XP_004142210.1 | 0.0e+00 | 94.52 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic [Cucumis sa... | [more] |
XP_022143855.1 | 0.0e+00 | 92.95 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic [Momordica ... | [more] |
KAG6595306.1 | 0.0e+00 | 91.78 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
Match Name | E-value | Identity | Description | |
Q9LFF1 | 1.9e-309 | 67.93 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
Q9FMF6 | 1.7e-100 | 30.72 | Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... | [more] |
Q9CA58 | 7.3e-96 | 30.90 | Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th... | [more] |
Q9SS81 | 9.2e-91 | 28.45 | Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana OX... | [more] |
Q9FIX3 | 4.3e-88 | 27.94 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7SQ06 | 0.0e+00 | 95.17 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BHC3 | 0.0e+00 | 95.17 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Cucumis ... | [more] |
A0A6J1CPZ4 | 0.0e+00 | 92.95 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Momordic... | [more] |
A0A6J1I5N1 | 0.0e+00 | 91.64 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Cucurbit... | [more] |
A0A6J1HFU3 | 0.0e+00 | 91.64 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Cucurbit... | [more] |
Match Name | E-value | Identity | Description | |
AT3G53700.1 | 1.3e-310 | 67.93 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G64320.1 | 1.2e-101 | 30.72 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G74580.1 | 5.2e-97 | 30.90 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G09060.1 | 6.6e-92 | 28.45 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G39710.1 | 3.0e-89 | 27.94 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |