HG10017064 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10017064
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Transcription factor, TCP
Location	Chr03: 10692014 .. 10692634 (+)
RNA-Seq Expression	HG10017064
Synteny	HG10017064

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATCGGAGATGGTTCTACACAAATTCCCCTCTTCTTCCGACACCCATTCTCAGCCCACCGCTTCTCACTCAGTCGTCGGTAGTAACTCATCTCCGGCCAACATCACGCATCAATCCCTCGTCCCTCGCAAGTCCACCGCCTCCTTATCCTCCTCTTCTTCCAAGGACCGCCACACCAAGGTCAACGGAAGAGGGCGGCGCGTACGTATGCCGGCCCTCTGTGCCGCCCGTATTTTTCAGTTGACGCGCGAGCTCGGTCATCGTTCCGATGGTGAGACAATCGAGTGGCTTCTCCGTCAGGCTGAGCCCTCCATCATTGCCGCCACAGGTACTGGTACTGTTCCGGCAGCTCCGATCTCCACCATCTCCCCGGCTATGGCTTCATCCGCTCGGTCCGTTTCTTGTAGGGTTCAGCCAGTGACGGTGGGCGGCGGTGGACAGGGGATGTTCGCGATGCCACCGCCGAGCTGCCGTCTAGATTTATGCCAGCCGGCTGGGATGGACTACTCTGCCGCCAGCAATGATTACCGCCACATGCCGTTCACGGCGCTGCTGTTGCAGCCGTCGACGGCGGAGGAGGCGGAGGAAAGACAGGAGGAGGATGTCTTCAGAGAGTAA

mRNA sequence

ATGGGATCGGAGATGGTTCTACACAAATTCCCCTCTTCTTCCGACACCCATTCTCAGCCCACCGCTTCTCACTCAGTCGTCGGTAGTAACTCATCTCCGGCCAACATCACGCATCAATCCCTCGTCCCTCGCAAGTCCACCGCCTCCTTATCCTCCTCTTCTTCCAAGGACCGCCACACCAAGGTCAACGGAAGAGGGCGGCGCGTACGTATGCCGGCCCTCTGTGCCGCCCGTATTTTTCAGTTGACGCGCGAGCTCGGTCATCGTTCCGATGGTGAGACAATCGAGTGGCTTCTCCGTCAGGCTGAGCCCTCCATCATTGCCGCCACAGGTACTGGTACTGTTCCGGCAGCTCCGATCTCCACCATCTCCCCGGCTATGGCTTCATCCGCTCGGTCCGTTTCTTGTAGGGTTCAGCCAGTGACGGTGGGCGGCGGTGGACAGGGGATGTTCGCGATGCCACCGCCGAGCTGCCGTCTAGATTTATGCCAGCCGGCTGGGATGGACTACTCTGCCGCCAGCAATGATTACCGCCACATGCCGTTCACGGCGCTGCTGTTGCAGCCGTCGACGGCGGAGGAGGCGGAGGAAAGACAGGAGGAGGATGTCTTCAGAGAGTAA

Coding sequence (CDS)

ATGGGATCGGAGATGGTTCTACACAAATTCCCCTCTTCTTCCGACACCCATTCTCAGCCCACCGCTTCTCACTCAGTCGTCGGTAGTAACTCATCTCCGGCCAACATCACGCATCAATCCCTCGTCCCTCGCAAGTCCACCGCCTCCTTATCCTCCTCTTCTTCCAAGGACCGCCACACCAAGGTCAACGGAAGAGGGCGGCGCGTACGTATGCCGGCCCTCTGTGCCGCCCGTATTTTTCAGTTGACGCGCGAGCTCGGTCATCGTTCCGATGGTGAGACAATCGAGTGGCTTCTCCGTCAGGCTGAGCCCTCCATCATTGCCGCCACAGGTACTGGTACTGTTCCGGCAGCTCCGATCTCCACCATCTCCCCGGCTATGGCTTCATCCGCTCGGTCCGTTTCTTGTAGGGTTCAGCCAGTGACGGTGGGCGGCGGTGGACAGGGGATGTTCGCGATGCCACCGCCGAGCTGCCGTCTAGATTTATGCCAGCCGGCTGGGATGGACTACTCTGCCGCCAGCAATGATTACCGCCACATGCCGTTCACGGCGCTGCTGTTGCAGCCGTCGACGGCGGAGGAGGCGGAGGAAAGACAGGAGGAGGATGTCTTCAGAGAGTAA

Protein sequence

MGSEMVLHKFPSSSDTHSQPTASHSVVGSNSSPANITHQSLVPRKSTASLSSSSSKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPISTISPAMASSARSVSCRVQPVTVGGGGQGMFAMPPPSCRLDLCQPAGMDYSAASNDYRHMPFTALLLQPSTAEEAEERQEEDVFRE

Homology

[Close]

BLAST of HG10017064 vs. NCBI nr
Match: XP_038882900.1 (transcription factor TCP11 [Benincasa hispida])

HSP 1 Score: 357.5 bits (916), Expect = 8.0e-95
Identity = 185/206 (89.81%), Postives = 196/206 (95.15%), Query Frame = 0


Query: 1   MGSEMVLHKFPSSSDTHSQPTASHSVVGSNSSPANITHQSLVPRKSTASLSSSSSKDRHT 60
           MGSE+VLHKFPS+SD +SQPTASHSVVGSNSS ANIT Q++VPRKST SL   SS+DRHT
Sbjct: 1   MGSEIVLHKFPSTSDHNSQPTASHSVVGSNSSLANITPQAVVPRKSTTSL---SSRDRHT 60

Query: 61  KVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPI 120
           KVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPI
Sbjct: 61  KVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPI 120

Query: 121 STISPAMASSARSVSCRVQPVTVGGGGQGMFAMPPPSCRLDLCQPAGMDYSAASNDYRHM 180
           ST+SPAMASSARS+SCRVQP+TVGGGGQGMFAMPPPSCRLDLCQP GM+YSA  NDYRHM
Sbjct: 121 STLSPAMASSARSISCRVQPLTVGGGGQGMFAMPPPSCRLDLCQPVGMEYSAVGNDYRHM 180

Query: 181 PFTALLLQPSTAEEAEERQEEDVFRE 207
           PFTALLLQPSTAEEAEERQEE+VFRE
Sbjct: 181 PFTALLLQPSTAEEAEERQEEEVFRE 203

[Close]

BLAST of HG10017064 vs. NCBI nr
Match: XP_004143267.1 (transcription factor TCP11 [Cucumis sativus] >KAE8647403.1 hypothetical protein Csa_003031 [Cucumis sativus])

HSP 1 Score: 352.8 bits (904), Expect = 2.0e-93
Identity = 183/207 (88.41%), Postives = 191/207 (92.27%), Query Frame = 0


Query: 1   MGSEMVLHKFPSSSDTHSQ-PTASHSVVGSNSSPANITHQSLVPRKSTASLSSSSSKDRH 60
           MGS++VLHKFPSSSD HSQ PTASHSVVGSNSSP  IT QSL+PRKS   LSSSSSKDRH
Sbjct: 1   MGSDIVLHKFPSSSDPHSQPPTASHSVVGSNSSPVTITRQSLLPRKSNTPLSSSSSKDRH 60

Query: 61  TKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAP 120
            KVNGRGRRVRMPALCAARIFQLTRELGHRS+GETIEWLLRQAEPSIIAATGTGTVP+ P
Sbjct: 61  IKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGP 120

Query: 121 ISTISPAMASSARSVSCRVQPVTVGGGGQGMFAMPPPSCRLDLCQPAGMDYSAASNDYRH 180
           IST+S AMASS RSVSCRVQPVTVGG GQGMFAMPPPSCRLDLCQP GM+YSAA NDYRH
Sbjct: 121 ISTVSSAMASSGRSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYRH 180

Query: 181 MPFTALLLQPSTAEEAEERQEEDVFRE 207
           MPFTALLLQPSTAEE EERQEE+VFRE
Sbjct: 181 MPFTALLLQPSTAEETEERQEEEVFRE 207

[Close]

BLAST of HG10017064 vs. NCBI nr
Match: XP_008462463.1 (PREDICTED: uncharacterized protein LOC103500811 [Cucumis melo])

HSP 1 Score: 351.7 bits (901), Expect = 4.4e-93
Identity = 181/207 (87.44%), Postives = 192/207 (92.75%), Query Frame = 0


Query: 1   MGSEMVLHKFPSSSDTHSQ-PTASHSVVGSNSSPANITHQSLVPRKSTASLSSSSSKDRH 60
           MGS++VLHKFPSSSD HSQ PTASHSVVGSNSSPA I+ QSL+PRKS  SLSSSSSKDRH
Sbjct: 116 MGSDIVLHKFPSSSDPHSQPPTASHSVVGSNSSPATISRQSLLPRKSNTSLSSSSSKDRH 175

Query: 61  TKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAP 120
            KVNGRGRRVRMPALCAARIFQLTRELGHRS+GETIEWLLRQAEPSIIAATGTGTVP+ P
Sbjct: 176 IKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGP 235

Query: 121 ISTISPAMASSARSVSCRVQPVTVGGGGQGMFAMPPPSCRLDLCQPAGMDYSAASNDYRH 180
           IST+S AMASS RSVSCR+QPVTVGG GQGMF+MPPPSCRLDLCQP GM+YSAA NDYRH
Sbjct: 236 ISTVSSAMASSGRSVSCRIQPVTVGGSGQGMFSMPPPSCRLDLCQPVGMEYSAAGNDYRH 295

Query: 181 MPFTALLLQPSTAEEAEERQEEDVFRE 207
           MPFTALLLQPST EE EERQEE+VFRE
Sbjct: 296 MPFTALLLQPSTGEETEERQEEEVFRE 322

[Close]

BLAST of HG10017064 vs. NCBI nr
Match: TYK07305.1 (transcription factor TCP11-like [Cucumis melo var. makuwa])

HSP 1 Score: 348.6 bits (893), Expect = 3.7e-92
Identity = 179/207 (86.47%), Postives = 191/207 (92.27%), Query Frame = 0


Query: 1   MGSEMVLHKFPSSSDTHSQ-PTASHSVVGSNSSPANITHQSLVPRKSTASLSSSSSKDRH 60
           MGS++VLH FPSSSD HSQ PTASHSVVGSNSSPA I+ QSL+PRKS  SLSSSSSKDRH
Sbjct: 1   MGSDIVLHNFPSSSDPHSQPPTASHSVVGSNSSPATISRQSLLPRKSNTSLSSSSSKDRH 60

Query: 61  TKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAP 120
            KVNGRGRRVRMPALCAARIFQLTRELGHRS+GETIEWLLRQAEPSIIAATGTGTVP+ P
Sbjct: 61  IKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGP 120

Query: 121 ISTISPAMASSARSVSCRVQPVTVGGGGQGMFAMPPPSCRLDLCQPAGMDYSAASNDYRH 180
           IST+S AMASS RSVSCR+QPVTVGG GQGMF++PPPSCRLDLCQP GM+YSAA NDYRH
Sbjct: 121 ISTVSSAMASSGRSVSCRIQPVTVGGSGQGMFSLPPPSCRLDLCQPVGMEYSAAGNDYRH 180

Query: 181 MPFTALLLQPSTAEEAEERQEEDVFRE 207
           MPFTALLLQPST EE EERQEE+VFRE
Sbjct: 181 MPFTALLLQPSTGEETEERQEEEVFRE 207

[Close]

BLAST of HG10017064 vs. NCBI nr
Match: XP_022926085.1 (transcription factor TCP11-like [Cucurbita moschata] >KAG7034559.1 Transcription factor TCP11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 345.1 bits (884), Expect = 4.1e-91
Identity = 184/208 (88.46%), Postives = 192/208 (92.31%), Query Frame = 0


Query: 1   MGSEMVLHKFPSSSDTHSQPT-ASHSVVGSNSSPANITHQSLVPRKSTASL-SSSSSKDR 60
           MGSE+ LHKFPSSSD HSQPT ASHSVV SN+SP N+T QS+VPRKSTASL SSSSS+DR
Sbjct: 1   MGSEIALHKFPSSSDHHSQPTAASHSVVRSNASPTNVTQQSVVPRKSTASLSSSSSSRDR 60

Query: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120
           HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA
Sbjct: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120

Query: 121 PISTISPAMASSARSVSCRVQPVTVGGGGQGMFAMPPPSCRLDLCQPAGMDYSAASNDYR 180
           PISTISPAMASSA SVSCRVQ V V    QGMFAMPPPSCRLDLCQP G+DYSAA NDYR
Sbjct: 121 PISTISPAMASSALSVSCRVQSVGVAADEQGMFAMPPPSCRLDLCQPVGLDYSAAGNDYR 180

Query: 181 HMPFTALLLQPSTAEEAEERQEEDVFRE 207
           HMPFTALLLQPSTA+EAEERQEE+VFRE
Sbjct: 181 HMPFTALLLQPSTADEAEERQEEEVFRE 208

[Close]

BLAST of HG10017064 vs. ExPASy Swiss-Prot
Match: Q9SJK7 (Transcription factor TCP11 OS=Arabidopsis thaliana OX=3702 GN=TCP11 PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 8.2e-34
Identity = 89/153 (58.17%), Postives = 100/153 (65.36%), Query Frame = 0


Query: 52  SSSSKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATG 111
           S+ +KDRHTKVNGR RRV MPAL AARIFQLTRELGH+++GETIEWLL QAEPSIIAATG
Sbjct: 40  SARTKDRHTKVNGRSRRVTMPALAAARIFQLTRELGHKTEGETIEWLLSQAEPSIIAATG 99

Query: 112 TGTVPAAPISTISPAMASSARSVSCRVQPVTVGGGGQGMFAMPPPSCRLDLCQPAGMDYS 171
            GT     IS      A  + S S    P T     Q       PSCRLDLCQP G+ Y 
Sbjct: 100 YGT---KLISNWVDVAADDSSSSSSMTSPQTQTQTPQS------PSCRLDLCQPIGIQYP 159

Query: 172 AASNDYRHMPFTALLLQP--STAEEAEERQEED 203
              N Y HMPFTA+LL+P  +TAE   E  EE+
Sbjct: 160 V--NGYSHMPFTAMLLEPMTTTAESEVEIAEEE 181

[Close]

BLAST of HG10017064 vs. ExPASy Swiss-Prot
Match: Q9C518 (Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.1e-28
Identity = 69/114 (60.53%), Postives = 91/114 (79.82%), Query Frame = 0


Query: 22  ASHSVVGSNSSPANITHQSLVPRKSTASLSSSSSKDRHTKVNGRGRRVRMPALCAARIFQ 81
           AS S+V  ++ P + T  +     +TA+ +  S+KDRHTKV+GRGRR+RMPALCAAR+FQ
Sbjct: 28  ASLSIVPRSTPPEDST-LATTSSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQ 87

Query: 82  LTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPISTISPAMASSARSVS 136
           LTRELGH+SDGETIEWLL+QAEP+I+AATGTGT+P A  ST+S ++ SS  ++S
Sbjct: 88  LTRELGHKSDGETIEWLLQQAEPAIVAATGTGTIP-ANFSTLSVSLRSSGSTLS 139

[Close]

BLAST of HG10017064 vs. ExPASy Swiss-Prot
Match: Q9FMX2 (Transcription factor TCP7 OS=Arabidopsis thaliana OX=3702 GN=TCP7 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 9.7e-27
Identity = 62/107 (57.94%), Postives = 83/107 (77.57%), Query Frame = 0


Query: 40  SLVPRKSTASLSSSSSKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLL 99
           +L+ ++ +  +    +KDRH+KV+GRGRR+RMP +CAAR+FQLTRELGH+SDG+TIEWLL
Sbjct: 24  ALIEQQPSVVVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLL 83

Query: 100 RQAEPSIIAATGTGTVPAAPISTISPAMASSARSVSCRVQPVTVGGG 147
           RQAEPSIIAATGTGT PA+  ST S ++  +  S S   +P ++ GG
Sbjct: 84  RQAEPSIIAATGTGTTPAS-FSTASVSIRGATNSTSLDHKPTSLLGG 129

[Close]

BLAST of HG10017064 vs. ExPASy Swiss-Prot
Match: Q9FTA2 (Transcription factor TCP21 OS=Arabidopsis thaliana OX=3702 GN=TCP21 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.2e-26
Identity = 67/99 (67.68%), Postives = 76/99 (76.77%), Query Frame = 0


Query: 55  SKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGT 114
           SKDRH+KV+GRGRR+RMP +CAAR+FQLTRELGH+SDG+TIEWLLRQAEPSIIAATGTGT
Sbjct: 31  SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGT 90

Query: 115 VPA----APISTISPAMASSARSVSCRVQPVTVGGGGQG 150
            PA    A +ST SP      R V  R +    GGGG G
Sbjct: 91  TPASFSTASLSTSSP-FTLGKRVV--RAEEGESGGGGGG 126

[Close]

BLAST of HG10017064 vs. ExPASy Swiss-Prot
Match: Q93Z00 (Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.8e-26
Identity = 72/139 (51.80%), Postives = 95/139 (68.35%), Query Frame = 0


Query: 11  PSSSDT------HSQPTASHSVVGSNSSPANITHQSLVPRKSTAS--------LSSSSSK 70
           PSSS +      H Q + S     S  S    T + L+  +  ++        L  +S+K
Sbjct: 59  PSSSSSLFSLHQHQQLSQSQPQSQSQKSQPQTTQKELLQTQEESAVVAAKKPPLKRASTK 118

Query: 71  DRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVP 130
           DRHTKV+GRGRR+RMPALCAAR+FQLTRELGH+SDGETIEWLL+QAEPS+IAATGTGT+P
Sbjct: 119 DRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIP 178

Query: 131 AAPISTISPAMASSARSVS 136
            A  ++++ ++ SS  S+S
Sbjct: 179 -ANFTSLNISLRSSGSSMS 196

[Close]

BLAST of HG10017064 vs. ExPASy TrEMBL
Match: A0A1S3CGZ3 (uncharacterized protein LOC103500811 OS=Cucumis melo OX=3656 GN=LOC103500811 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 2.1e-93
Identity = 181/207 (87.44%), Postives = 192/207 (92.75%), Query Frame = 0


Query: 1   MGSEMVLHKFPSSSDTHSQ-PTASHSVVGSNSSPANITHQSLVPRKSTASLSSSSSKDRH 60
           MGS++VLHKFPSSSD HSQ PTASHSVVGSNSSPA I+ QSL+PRKS  SLSSSSSKDRH
Sbjct: 116 MGSDIVLHKFPSSSDPHSQPPTASHSVVGSNSSPATISRQSLLPRKSNTSLSSSSSKDRH 175

Query: 61  TKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAP 120
            KVNGRGRRVRMPALCAARIFQLTRELGHRS+GETIEWLLRQAEPSIIAATGTGTVP+ P
Sbjct: 176 IKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGP 235

Query: 121 ISTISPAMASSARSVSCRVQPVTVGGGGQGMFAMPPPSCRLDLCQPAGMDYSAASNDYRH 180
           IST+S AMASS RSVSCR+QPVTVGG GQGMF+MPPPSCRLDLCQP GM+YSAA NDYRH
Sbjct: 236 ISTVSSAMASSGRSVSCRIQPVTVGGSGQGMFSMPPPSCRLDLCQPVGMEYSAAGNDYRH 295

Query: 181 MPFTALLLQPSTAEEAEERQEEDVFRE 207
           MPFTALLLQPST EE EERQEE+VFRE
Sbjct: 296 MPFTALLLQPSTGEETEERQEEEVFRE 322

[Close]

BLAST of HG10017064 vs. ExPASy TrEMBL
Match: A0A5D3C791 (Transcription factor TCP11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00190 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.8e-92
Identity = 179/207 (86.47%), Postives = 191/207 (92.27%), Query Frame = 0


Query: 1   MGSEMVLHKFPSSSDTHSQ-PTASHSVVGSNSSPANITHQSLVPRKSTASLSSSSSKDRH 60
           MGS++VLH FPSSSD HSQ PTASHSVVGSNSSPA I+ QSL+PRKS  SLSSSSSKDRH
Sbjct: 1   MGSDIVLHNFPSSSDPHSQPPTASHSVVGSNSSPATISRQSLLPRKSNTSLSSSSSKDRH 60

Query: 61  TKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAP 120
            KVNGRGRRVRMPALCAARIFQLTRELGHRS+GETIEWLLRQAEPSIIAATGTGTVP+ P
Sbjct: 61  IKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGP 120

Query: 121 ISTISPAMASSARSVSCRVQPVTVGGGGQGMFAMPPPSCRLDLCQPAGMDYSAASNDYRH 180
           IST+S AMASS RSVSCR+QPVTVGG GQGMF++PPPSCRLDLCQP GM+YSAA NDYRH
Sbjct: 121 ISTVSSAMASSGRSVSCRIQPVTVGGSGQGMFSLPPPSCRLDLCQPVGMEYSAAGNDYRH 180

Query: 181 MPFTALLLQPSTAEEAEERQEEDVFRE 207
           MPFTALLLQPST EE EERQEE+VFRE
Sbjct: 181 MPFTALLLQPSTGEETEERQEEEVFRE 207

[Close]

BLAST of HG10017064 vs. ExPASy TrEMBL
Match: A0A0A0KH86 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G446400 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.8e-92
Identity = 180/205 (87.80%), Postives = 189/205 (92.20%), Query Frame = 0


Query: 1   MGSEMVLHKFPSSSDTHSQ-PTASHSVVGSNSSPANITHQSLVPRKSTASLSSSSSKDRH 60
           MGS++VLHKFPSSSD HSQ PTASHSVVGSNSSP  IT QSL+PRKS   LSSSSSKDRH
Sbjct: 1   MGSDIVLHKFPSSSDPHSQPPTASHSVVGSNSSPVTITRQSLLPRKSNTPLSSSSSKDRH 60

Query: 61  TKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAP 120
            KVNGRGRRVRMPALCAARIFQLTRELGHRS+GETIEWLLRQAEPSIIAATGTGTVP+ P
Sbjct: 61  IKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSGP 120

Query: 121 ISTISPAMASSARSVSCRVQPVTVGGGGQGMFAMPPPSCRLDLCQPAGMDYSAASNDYRH 180
           IST+S AMASS RSVSCRVQPVTVGG GQGMFAMPPPSCRLDLCQP GM+YSAA NDYRH
Sbjct: 121 ISTVSSAMASSGRSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYRH 180

Query: 181 MPFTALLLQPSTAEEAEERQEEDVF 205
           MPFTALLLQPSTAEE EERQEE++F
Sbjct: 181 MPFTALLLQPSTAEETEERQEEELF 205

[Close]

BLAST of HG10017064 vs. ExPASy TrEMBL
Match: A0A6J1EK07 (transcription factor TCP11-like OS=Cucurbita moschata OX=3662 GN=LOC111433306 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 2.0e-91
Identity = 184/208 (88.46%), Postives = 192/208 (92.31%), Query Frame = 0


Query: 1   MGSEMVLHKFPSSSDTHSQPT-ASHSVVGSNSSPANITHQSLVPRKSTASL-SSSSSKDR 60
           MGSE+ LHKFPSSSD HSQPT ASHSVV SN+SP N+T QS+VPRKSTASL SSSSS+DR
Sbjct: 1   MGSEIALHKFPSSSDHHSQPTAASHSVVRSNASPTNVTQQSVVPRKSTASLSSSSSSRDR 60

Query: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120
           HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA
Sbjct: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120

Query: 121 PISTISPAMASSARSVSCRVQPVTVGGGGQGMFAMPPPSCRLDLCQPAGMDYSAASNDYR 180
           PISTISPAMASSA SVSCRVQ V V    QGMFAMPPPSCRLDLCQP G+DYSAA NDYR
Sbjct: 121 PISTISPAMASSALSVSCRVQSVGVAADEQGMFAMPPPSCRLDLCQPVGLDYSAAGNDYR 180

Query: 181 HMPFTALLLQPSTAEEAEERQEEDVFRE 207
           HMPFTALLLQPSTA+EAEERQEE+VFRE
Sbjct: 181 HMPFTALLLQPSTADEAEERQEEEVFRE 208

[Close]

BLAST of HG10017064 vs. ExPASy TrEMBL
Match: A0A6J1IR93 (transcription factor TCP11-like OS=Cucurbita maxima OX=3661 GN=LOC111478656 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.5e-86
Identity = 179/208 (86.06%), Postives = 188/208 (90.38%), Query Frame = 0


Query: 1   MGSEMVLHKFPSSSDTHSQPT-ASHSVVGSNSSPANITHQSLVPRKSTASL-SSSSSKDR 60
           MGSE+ LHKFPSSSD HSQ T ASHSVV +NSSP N+T QS+VPRKSTASL SSSSS+DR
Sbjct: 1   MGSEIALHKFPSSSDHHSQSTAASHSVVRNNSSPTNVTQQSVVPRKSTASLSSSSSSRDR 60

Query: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120
           HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA
Sbjct: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120

Query: 121 PISTISPAMASSARSVSCRVQPVTVGGGGQGMFAMPPPSCRLDLCQPAGMDYSAASNDYR 180
           PISTI+PAMASSA SVSCRVQ V V    QGMFAM  PSCRLDLCQP G+DYSAA NDYR
Sbjct: 121 PISTITPAMASSAPSVSCRVQSVGVAADEQGMFAM--PSCRLDLCQPVGLDYSAAGNDYR 180

Query: 181 HMPFTALLLQPSTAEEAEERQEEDVFRE 207
           HMPFTALLLQPSTA+EAEERQE +VFRE
Sbjct: 181 HMPFTALLLQPSTADEAEERQEGEVFRE 206

[Close]

BLAST of HG10017064 vs. TAIR 10
Match: AT2G37000.1 (TCP family transcription factor )

HSP 1 Score: 145.2 bits (365), Expect = 5.8e-35
Identity = 89/153 (58.17%), Postives = 100/153 (65.36%), Query Frame = 0


Query: 52  SSSSKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATG 111
           S+ +KDRHTKVNGR RRV MPAL AARIFQLTRELGH+++GETIEWLL QAEPSIIAATG
Sbjct: 40  SARTKDRHTKVNGRSRRVTMPALAAARIFQLTRELGHKTEGETIEWLLSQAEPSIIAATG 99

Query: 112 TGTVPAAPISTISPAMASSARSVSCRVQPVTVGGGGQGMFAMPPPSCRLDLCQPAGMDYS 171
            GT     IS      A  + S S    P T     Q       PSCRLDLCQP G+ Y 
Sbjct: 100 YGT---KLISNWVDVAADDSSSSSSMTSPQTQTQTPQS------PSCRLDLCQPIGIQYP 159

Query: 172 AASNDYRHMPFTALLLQP--STAEEAEERQEED 203
              N Y HMPFTA+LL+P  +TAE   E  EE+
Sbjct: 160 V--NGYSHMPFTAMLLEPMTTTAESEVEIAEEE 181

[Close]

BLAST of HG10017064 vs. TAIR 10
Match: AT1G58100.1 (TCP family transcription factor )

HSP 1 Score: 125.9 bits (315), Expect = 3.6e-29
Identity = 69/114 (60.53%), Postives = 91/114 (79.82%), Query Frame = 0


Query: 22  ASHSVVGSNSSPANITHQSLVPRKSTASLSSSSSKDRHTKVNGRGRRVRMPALCAARIFQ 81
           AS S+V  ++ P + T  +     +TA+ +  S+KDRHTKV+GRGRR+RMPALCAAR+FQ
Sbjct: 28  ASLSIVPRSTPPEDST-LATTSSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQ 87

Query: 82  LTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPISTISPAMASSARSVS 136
           LTRELGH+SDGETIEWLL+QAEP+I+AATGTGT+P A  ST+S ++ SS  ++S
Sbjct: 88  LTRELGHKSDGETIEWLLQQAEPAIVAATGTGTIP-ANFSTLSVSLRSSGSTLS 139

[Close]

BLAST of HG10017064 vs. TAIR 10
Match: AT5G23280.1 (TCP family transcription factor )

HSP 1 Score: 121.7 bits (304), Expect = 6.9e-28
Identity = 62/107 (57.94%), Postives = 83/107 (77.57%), Query Frame = 0


Query: 40  SLVPRKSTASLSSSSSKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLL 99
           +L+ ++ +  +    +KDRH+KV+GRGRR+RMP +CAAR+FQLTRELGH+SDG+TIEWLL
Sbjct: 24  ALIEQQPSVVVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLL 83

Query: 100 RQAEPSIIAATGTGTVPAAPISTISPAMASSARSVSCRVQPVTVGGG 147
           RQAEPSIIAATGTGT PA+  ST S ++  +  S S   +P ++ GG
Sbjct: 84  RQAEPSIIAATGTGTTPAS-FSTASVSIRGATNSTSLDHKPTSLLGG 129

[Close]

BLAST of HG10017064 vs. TAIR 10
Match: AT5G08330.1 (TCP family transcription factor )

HSP 1 Score: 120.6 bits (301), Expect = 1.5e-27
Identity = 67/99 (67.68%), Postives = 76/99 (76.77%), Query Frame = 0


Query: 55  SKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGT 114
           SKDRH+KV+GRGRR+RMP +CAAR+FQLTRELGH+SDG+TIEWLLRQAEPSIIAATGTGT
Sbjct: 31  SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGT 90

Query: 115 VPA----APISTISPAMASSARSVSCRVQPVTVGGGGQG 150
            PA    A +ST SP      R V  R +    GGGG G
Sbjct: 91  TPASFSTASLSTSSP-FTLGKRVV--RAEEGESGGGGGG 126

[Close]

BLAST of HG10017064 vs. TAIR 10
Match: AT2G45680.1 (TCP family transcription factor )

HSP 1 Score: 119.4 bits (298), Expect = 3.4e-27
Identity = 62/83 (74.70%), Postives = 68/83 (81.93%), Query Frame = 0


Query: 40  SLVPRKSTA-SLSSSSSKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWL 99
           SL P  ST   L  +S+KDRHTKV GRGRR+RMPA CAARIFQLTRELGH+SDGETI WL
Sbjct: 59  SLAPPSSTGPPLKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWL 118

Query: 100 LRQAEPSIIAATGTGTVPAAPIS 122
           L  AEP+IIAATGTGTVPA  +S
Sbjct: 119 LENAEPAIIAATGTGTVPAIAMS 141

The following BLAST results are available for this feature:

BLAST of HG10017064 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882900.1	8.0e-95	89.81	transcription factor TCP11 [Benincasa hispida]	[more]
XP_004143267.1	2.0e-93	88.41	transcription factor TCP11 [Cucumis sativus] >KAE8647403.1 hypothetical protein ...	[more]
XP_008462463.1	4.4e-93	87.44	PREDICTED: uncharacterized protein LOC103500811 [Cucumis melo]	[more]
TYK07305.1	3.7e-92	86.47	transcription factor TCP11-like [Cucumis melo var. makuwa]	[more]
XP_022926085.1	4.1e-91	88.46	transcription factor TCP11-like [Cucurbita moschata] >KAG7034559.1 Transcription...	[more]

BLAST of HG10017064 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJK7	8.2e-34	58.17	Transcription factor TCP11 OS=Arabidopsis thaliana OX=3702 GN=TCP11 PE=1 SV=1	[more]
Q9C518	5.1e-28	60.53	Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1	[more]
Q9FMX2	9.7e-27	57.94	Transcription factor TCP7 OS=Arabidopsis thaliana OX=3702 GN=TCP7 PE=1 SV=1	[more]
Q9FTA2	2.2e-26	67.68	Transcription factor TCP21 OS=Arabidopsis thaliana OX=3702 GN=TCP21 PE=1 SV=1	[more]
Q93Z00	4.8e-26	51.80	Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1	[more]

BLAST of HG10017064 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CGZ3	2.1e-93	87.44	uncharacterized protein LOC103500811 OS=Cucumis melo OX=3656 GN=LOC103500811 PE=...	[more]
A0A5D3C791	1.8e-92	86.47	Transcription factor TCP11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0KH86	1.8e-92	87.80	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G446400 PE=4 SV...	[more]
A0A6J1EK07	2.0e-91	88.46	transcription factor TCP11-like OS=Cucurbita moschata OX=3662 GN=LOC111433306 PE...	[more]
A0A6J1IR93	2.5e-86	86.06	transcription factor TCP11-like OS=Cucurbita maxima OX=3661 GN=LOC111478656 PE=4...	[more]

BLAST of HG10017064 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37000.1	5.8e-35	58.17	TCP family transcription factor	[more]
AT1G58100.1	3.6e-29	60.53	TCP family transcription factor	[more]
AT5G23280.1	6.9e-28	57.94	TCP family transcription factor	[more]
AT5G08330.1	1.5e-27	67.68	TCP family transcription factor	[more]
AT2G45680.1	3.4e-27	74.70	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 54..154 e-value: 4.8E-30 score: 105.2
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 55..109 score: 27.853064
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..68
None	No IPR available	PANTHER	PTHR31072:SF4	TRANSCRIPTION FACTOR TCP16-RELATED	coord: 33..134
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 33..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10017064.1	HG10017064.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity