HG10016995 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10016995
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RAB6-interacting golgin
Location	Chr03: 9970150 .. 9971447 (+)
RNA-Seq Expression	HG10016995
Synteny	HG10016995

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGAGCGAGCAGAATCCACAGCAACTTCAAGCAATGTTAGATAATTCTGCAAATTTTAGTTTCAGTAGCAAAGAAGACGATGAGATGTCCAAATCTGCGCTTGCGGCTTTCAGGGAAAAGGAAGAGGAAATCGACCGGATGAGGACCGAGCTTCATAACAAACTTCAAGTTCGTCTCGGCCGAGTCCAGGAAGAATCAAGGCGTTTGACTACTTTTCGAGAGGTCCTTCATCTCTTTCCTCCCTAACTAAACCCTAATTCATAAGACCTCTTCTTTCTATTTCATCTCTGCAACCAATTTCTCTGTTGGAATTCTGTTTCTGTGAGAAATTGTTCTTGGAAACCTACAAATTTTGATATGATTAATTGATGAACAGGAACTTGAAGCCATAGGGGGGGATCCAATGAGGAAGGAAATTGGACAAATTCGTAAGAAAATCGATGCCCTAAACAAGGAATTAAAGCCTCTCGGACTAACATGCCAAAAGAAGGTCTTTTTTTTTTCTCTCTACTTTTTTTTTTCTTGTTTCTAAAATTATTTTATTTTTTTTAAAACAGTTGTAAATTTATTTTTAATGACTCTGATTTGATGGCTTTTATATATAATTTTAGAATGATCAGAAGATTTGTAAAGAATGTTATTCTGAACATTGAAGAAATCTTGAATACCTTTTTGGCGAGGAATCTAAAAACCTCACTCATCTCCAAAAGGAAAATAACTAAACAAATCTTAAAGATTAATTATAAATTCAATATTAGCTTAGTGGATAAATGGACATTTATCATATTATTATCATTTTAATAGCGGAGGGTTCATTCTTCCACTTCATATTTTTTGAGAAAAATAAAATAAAAAAATATTTATCCAAATGTATTTTTATCAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAATTGAGAATGGTTTTGAAAAAAACAAAAGCAGTAATAATACTCTCAATGTATTAATCACATAACAAAAAAGAATTATGGTAGATTTTTACAATAGTATATTTTGTGCTGAAAAATGGTTGAAATTGTTTTGTGTGACAGGAGAAAGAGTACAAAGATGCCCTTGATGTTTTTAATGAAAAGAACAACGAAAAAGTACAGTTAATATCAAAACTAATGGAGGTTAGTTTCGTAAATTGGGTACTTTTCCCTTCTTTTTTTCAATTATTTATTTATTTTTTCTTAAATTAAGATTTTGTGTTCCTATTTTTAGATGGTTGGTGAAAGTGAAAAGCTGAGGCTAAAGAGGTTGGAAGAATTGAGTAAGCATGTGGATTCTTCCTAA

mRNA sequence

ATGCAGAGCGAGCAGAATCCACAGCAACTTCAAGCAATTAGCAAAGAAGACGATGAGATGTCCAAATCTGCGCTTGCGGCTTTCAGGGAAAAGGAAGAGGAAATCGACCGGATGAGGACCGAGCTTCATAACAAACTTCAAGTTCGTCTCGGCCGAGTCCAGGAAGAATCAAGGCGTTTGACTACTTTTCGAGAGGAACTTGAAGCCATAGGGGGGGATCCAATGAGGAAGGAAATTGGACAAATTCGTAAGAAAATCGATGCCCTAAACAAGGAATTAAAGCCTCTCGGACTAACATGCCAAAAGAAGGAGAAAGAGTACAAAGATGCCCTTGATGTTTTTAATGAAAAGAACAACGAAAAAGTACAGTTAATATCAAAACTAATGGAGATGGTTGGTGAAAGTGAAAAGCTGAGGCTAAAGAGGTTGGAAGAATTGAGTAAGCATGTGGATTCTTCCTAA

Coding sequence (CDS)

ATGCAGAGCGAGCAGAATCCACAGCAACTTCAAGCAATTAGCAAAGAAGACGATGAGATGTCCAAATCTGCGCTTGCGGCTTTCAGGGAAAAGGAAGAGGAAATCGACCGGATGAGGACCGAGCTTCATAACAAACTTCAAGTTCGTCTCGGCCGAGTCCAGGAAGAATCAAGGCGTTTGACTACTTTTCGAGAGGAACTTGAAGCCATAGGGGGGGATCCAATGAGGAAGGAAATTGGACAAATTCGTAAGAAAATCGATGCCCTAAACAAGGAATTAAAGCCTCTCGGACTAACATGCCAAAAGAAGGAGAAAGAGTACAAAGATGCCCTTGATGTTTTTAATGAAAAGAACAACGAAAAAGTACAGTTAATATCAAAACTAATGGAGATGGTTGGTGAAAGTGAAAAGCTGAGGCTAAAGAGGTTGGAAGAATTGAGTAAGCATGTGGATTCTTCCTAA

Protein sequence

MQSEQNPQQLQAISKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVRLGRVQEESRRLTTFREELEAIGGDPMRKEIGQIRKKIDALNKELKPLGLTCQKKEKEYKDALDVFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDSS

Homology

[Close]

BLAST of HG10016995 vs. NCBI nr
Match: XP_038882826.1 (uncharacterized protein LOC120073968 isoform X1 [Benincasa hispida])

HSP 1 Score: 253.1 bits (645), Expect = 1.6e-63
Identity = 139/163 (85.28%), Postives = 148/163 (90.80%), Query Frame = 0


Query: 1   MQSEQNPQQLQAI----------SKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVRL 60
           MQS+QNPQQLQA+          SKEDD+MSKSALAAFREKEEEIDRMR +LHNKLQVRL
Sbjct: 1   MQSDQNPQQLQAMLDNSASLSFSSKEDDDMSKSALAAFREKEEEIDRMRADLHNKLQVRL 60

Query: 61  GRVQEESRRLTTFREELEAIGGDPMRKEIGQIRKKIDALNKELKPLGLTCQKKEKEYKDA 120
           GRVQEESRRL + REEL+AI GDPMRKEIGQIRKKIDALNKELKPLG+TCQKKEKEYKDA
Sbjct: 61  GRVQEESRRLASIREELDAIAGDPMRKEIGQIRKKIDALNKELKPLGITCQKKEKEYKDA 120

Query: 121 LDVFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDSS 154
           LD FNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVD++
Sbjct: 121 LDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNT 163

[Close]

BLAST of HG10016995 vs. NCBI nr
Match: XP_008462544.1 (PREDICTED: uncharacterized protein LOC103500877 [Cucumis melo])

HSP 1 Score: 252.7 bits (644), Expect = 2.1e-63
Identity = 142/164 (86.59%), Postives = 150/164 (91.46%), Query Frame = 0


Query: 1   MQSEQN-PQQLQAI----------SKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVR 60
           MQ++QN PQQLQ +          SKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVR
Sbjct: 1   MQTDQNPPQQLQTMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVR 60

Query: 61  LGRVQEESRRLTTFREELEAIGGDPMRKEIGQIRKKIDALNKELKPLGLTCQKKEKEYKD 120
           LGRVQEESRRL++ REELEAIGGDPMRKEIGQIRKKIDALNKELKPLG+TCQKKEKEYKD
Sbjct: 61  LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDALNKELKPLGVTCQKKEKEYKD 120

Query: 121 ALDVFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDSS 154
           ALD FNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVD++
Sbjct: 121 ALDSFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNT 164

[Close]

BLAST of HG10016995 vs. NCBI nr
Match: XP_004143305.1 (uncharacterized protein LOC101209289 [Cucumis sativus] >KGN48239.1 hypothetical protein Csa_003193 [Cucumis sativus])

HSP 1 Score: 251.5 bits (641), Expect = 4.6e-63
Identity = 142/164 (86.59%), Postives = 151/164 (92.07%), Query Frame = 0


Query: 1   MQSEQN-PQQLQAI----------SKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVR 60
           MQS+QN PQQLQA+          SKEDDEMSKSALAAFREKEEEIDRMRTEL+NKLQ+R
Sbjct: 1   MQSDQNPPQQLQAMLENSANLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELNNKLQLR 60

Query: 61  LGRVQEESRRLTTFREELEAIGGDPMRKEIGQIRKKIDALNKELKPLGLTCQKKEKEYKD 120
           LGRVQEESRRL++ REELEAIGGDPMRKEIGQIRKKIDALNKELKPLG+TCQKKEKEYKD
Sbjct: 61  LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDALNKELKPLGVTCQKKEKEYKD 120

Query: 121 ALDVFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDSS 154
           ALD FNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVD++
Sbjct: 121 ALDSFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNT 164

[Close]

BLAST of HG10016995 vs. NCBI nr
Match: KAA0025281.1 (putative DNA double-strand break repair Rad50 ATPase isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 235.0 bits (598), Expect = 4.4e-58
Identity = 137/164 (83.54%), Postives = 144/164 (87.80%), Query Frame = 0


Query: 1   MQSEQN-PQQLQAI----------SKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVR 60
           MQ++QN PQQLQ +          SKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVR
Sbjct: 1   MQTDQNPPQQLQTMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVR 60

Query: 61  LGRVQEESRRLTTFREELEAIGGDPMRKEIGQIRKKIDALNKELKPLGLTCQKKEKEYKD 120
           LGRVQEESRRL++ REELEAIGGDPMRKEIGQIRKKIDALNKELKPLG      EKEYKD
Sbjct: 61  LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDALNKELKPLG------EKEYKD 120

Query: 121 ALDVFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDSS 154
           ALD FNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVD++
Sbjct: 121 ALDSFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNT 158

[Close]

BLAST of HG10016995 vs. NCBI nr
Match: XP_023543803.1 (uncharacterized protein LOC111803564 [Cucurbita pepo subsp. pepo] >KAG7034517.1 hypothetical protein SDJN02_04247 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 229.6 bits (584), Expect = 1.9e-56
Identity = 127/163 (77.91%), Postives = 139/163 (85.28%), Query Frame = 0


Query: 1   MQSEQNPQQLQAI----------SKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVRL 60
           MQ+EQNPQQLQ +          SKED+EMSKSAL+AFREKEEEI+RMRTEL  KLQ RL
Sbjct: 1   MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARL 60

Query: 61  GRVQEESRRLTTFREELEAIGGDPMRKEIGQIRKKIDALNKELKPLGLTCQKKEKEYKDA 120
           GRV+EESRRL + REELE I GDP RKEIGQIRK+ID LNKELKPLG  CQKKEKEYKDA
Sbjct: 61  GRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKDA 120

Query: 121 LDVFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDSS 154
           LD FNEKNNEKVQ ISKLMEMVGESE++RLKRLEELSKHVD++
Sbjct: 121 LDAFNEKNNEKVQCISKLMEMVGESERVRLKRLEELSKHVDNN 163

[Close]

BLAST of HG10016995 vs. ExPASy TrEMBL
Match: A0A1S3CIS0 (RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103500877 PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.0e-63
Identity = 142/164 (86.59%), Postives = 150/164 (91.46%), Query Frame = 0


Query: 1   MQSEQN-PQQLQAI----------SKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVR 60
           MQ++QN PQQLQ +          SKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVR
Sbjct: 1   MQTDQNPPQQLQTMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVR 60

Query: 61  LGRVQEESRRLTTFREELEAIGGDPMRKEIGQIRKKIDALNKELKPLGLTCQKKEKEYKD 120
           LGRVQEESRRL++ REELEAIGGDPMRKEIGQIRKKIDALNKELKPLG+TCQKKEKEYKD
Sbjct: 61  LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDALNKELKPLGVTCQKKEKEYKD 120

Query: 121 ALDVFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDSS 154
           ALD FNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVD++
Sbjct: 121 ALDSFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNT 164

[Close]

BLAST of HG10016995 vs. ExPASy TrEMBL
Match: A0A0A0KHE9 (RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_6G450440 PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.2e-63
Identity = 142/164 (86.59%), Postives = 151/164 (92.07%), Query Frame = 0


Query: 1   MQSEQN-PQQLQAI----------SKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVR 60
           MQS+QN PQQLQA+          SKEDDEMSKSALAAFREKEEEIDRMRTEL+NKLQ+R
Sbjct: 1   MQSDQNPPQQLQAMLENSANLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELNNKLQLR 60

Query: 61  LGRVQEESRRLTTFREELEAIGGDPMRKEIGQIRKKIDALNKELKPLGLTCQKKEKEYKD 120
           LGRVQEESRRL++ REELEAIGGDPMRKEIGQIRKKIDALNKELKPLG+TCQKKEKEYKD
Sbjct: 61  LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDALNKELKPLGVTCQKKEKEYKD 120

Query: 121 ALDVFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDSS 154
           ALD FNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVD++
Sbjct: 121 ALDSFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNT 164

[Close]

BLAST of HG10016995 vs. ExPASy TrEMBL
Match: A0A5A7SM04 (RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G001330 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.1e-58
Identity = 137/164 (83.54%), Postives = 144/164 (87.80%), Query Frame = 0


Query: 1   MQSEQN-PQQLQAI----------SKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVR 60
           MQ++QN PQQLQ +          SKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVR
Sbjct: 1   MQTDQNPPQQLQTMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVR 60

Query: 61  LGRVQEESRRLTTFREELEAIGGDPMRKEIGQIRKKIDALNKELKPLGLTCQKKEKEYKD 120
           LGRVQEESRRL++ REELEAIGGDPMRKEIGQIRKKIDALNKELKPLG      EKEYKD
Sbjct: 61  LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDALNKELKPLG------EKEYKD 120

Query: 121 ALDVFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDSS 154
           ALD FNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVD++
Sbjct: 121 ALDSFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNT 158

[Close]

BLAST of HG10016995 vs. ExPASy TrEMBL
Match: A0A6J1IS07 (RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111478791 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 9.0e-57
Identity = 127/163 (77.91%), Postives = 139/163 (85.28%), Query Frame = 0


Query: 1   MQSEQNPQQLQAI----------SKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVRL 60
           MQ+EQNPQQLQ +          SKED+EMSKSAL+AFREKEEEI+RMRTEL  KLQ RL
Sbjct: 1   MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARL 60

Query: 61  GRVQEESRRLTTFREELEAIGGDPMRKEIGQIRKKIDALNKELKPLGLTCQKKEKEYKDA 120
           GRV+EESRRL + REELE I GDP RKEIGQIRK+ID LNKELKPLG  CQKKEKEYKDA
Sbjct: 61  GRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKDA 120

Query: 121 LDVFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDSS 154
           LD FNEKNNEKVQ ISKLMEMVGESE++RLKRLEELSKHVD++
Sbjct: 121 LDAFNEKNNEKVQCISKLMEMVGESERVRLKRLEELSKHVDNN 163

[Close]

BLAST of HG10016995 vs. ExPASy TrEMBL
Match: A0A6J1EJF7 (RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111433155 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 5.8e-56
Identity = 126/163 (77.30%), Postives = 138/163 (84.66%), Query Frame = 0


Query: 1   MQSEQNPQQLQAI----------SKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVRL 60
           MQ+EQNPQQLQ +          SKED+EMSKSAL+AFREKEEEI+RMRTEL  KLQ RL
Sbjct: 1   MQNEQNPQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQARL 60

Query: 61  GRVQEESRRLTTFREELEAIGGDPMRKEIGQIRKKIDALNKELKPLGLTCQKKEKEYKDA 120
           GRV+EESRRL + REELE I GDP RKEIGQIRK+ID LNKELKPLG  CQKKEKEYKDA
Sbjct: 61  GRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKDA 120

Query: 121 LDVFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDSS 154
           LD FNEKNNEKV  ISKLMEMVGESE++RLKRLEELSKHVD++
Sbjct: 121 LDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNN 163

[Close]

BLAST of HG10016995 vs. TAIR 10
Match: AT3G09980.1 (Family of unknown function (DUF662) )

HSP 1 Score: 178.7 bits (452), Expect = 3.5e-45
Identity = 91/140 (65.00%), Postives = 122/140 (87.14%), Query Frame = 0


Query: 13  ISKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVRLGRVQEESRRLTTFREELEAIGG 72
           +SKED+EMS++AL+AFR KEEEI++ + E+  ++Q +LGRV+EE++RL   REELE +  
Sbjct: 38  MSKEDEEMSRTALSAFRAKEEEIEKKKMEIRERVQAQLGRVEEETKRLALIREELEGL-A 97

Query: 73  DPMRKEIGQIRKKIDALNKELKPLGLTCQKKEKEYKDALDVFNEKNNEKVQLISKLMEMV 132
           DPMRKE+  +RKKID++NKELKPLG T QKKE+EYK+AL+ FNEKN EKVQLI++LME+V
Sbjct: 98  DPMRKEVAMVRKKIDSVNKELKPLGHTVQKKEREYKEALEAFNEKNREKVQLITRLMELV 157

Query: 133 GESEKLRLKRLEELSKHVDS 153
           GESEK+R+K+LEELSK++DS
Sbjct: 158 GESEKMRMKKLEELSKNIDS 176

[Close]

BLAST of HG10016995 vs. TAIR 10
Match: AT3G52920.2 (Family of unknown function (DUF662) )

HSP 1 Score: 177.6 bits (449), Expect = 7.8e-45
Identity = 95/154 (61.69%), Postives = 128/154 (83.12%), Query Frame = 0


Query: 5   QNPQQLQAI------SKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVRLGRVQEESR 64
           Q PQQ+ ++      SKED+EM++SAL+AFR KE+EI++ + E+  +++ +LGRV+EE+R
Sbjct: 10  QPPQQMMSLSFSSQMSKEDEEMARSALSAFRAKEDEIEKRKMEVRERVKAQLGRVEEETR 69

Query: 65  RLTTFREELEAIGGDPMRKEIGQIRKKIDALNKELKPLGLTCQKKEKEYKDALDVFNEKN 124
           RL + REELE +  DPMRKE+  +RKKID++NKELKPLG T QKKE+EYK+ALD FNEKN
Sbjct: 70  RLASIREELETM-ADPMRKEVNWVRKKIDSVNKELKPLGSTVQKKEREYKEALDTFNEKN 129

Query: 125 NEKVQLISKLMEMVGESEKLRLKRLEELSKHVDS 153
            EKVQLI+KLME+VGESEKLRLK+L+ELS+ +D+
Sbjct: 130 REKVQLITKLMELVGESEKLRLKKLDELSRSIDT 162

[Close]

BLAST of HG10016995 vs. TAIR 10
Match: AT2G36410.2 (Family of unknown function (DUF662) )

HSP 1 Score: 175.6 bits (444), Expect = 3.0e-44
Identity = 90/140 (64.29%), Postives = 123/140 (87.86%), Query Frame = 0


Query: 13  ISKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVRLGRVQEESRRLTTFREELEAIGG 72
           +S+ED+EM++SAL+AFR KE+EI++ R E+  ++Q +LGRV++E++RL+T REELE++  
Sbjct: 53  MSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLSTIREELESM-A 112

Query: 73  DPMRKEIGQIRKKIDALNKELKPLGLTCQKKEKEYKDALDVFNEKNNEKVQLISKLMEMV 132
           DPMRKE+  +RKKID++NKELKPLG T QKKE+EYK+ALD FNEKN EKVQLI+KLME+V
Sbjct: 113 DPMRKEVSVVRKKIDSVNKELKPLGSTVQKKEREYKEALDTFNEKNREKVQLITKLMELV 172

Query: 133 GESEKLRLKRLEELSKHVDS 153
           GESEKLR+ +LEELSK +++
Sbjct: 173 GESEKLRMIKLEELSKSIET 191

[Close]

BLAST of HG10016995 vs. TAIR 10
Match: AT3G52920.1 (Family of unknown function (DUF662) )

HSP 1 Score: 173.3 bits (438), Expect = 1.5e-43
Identity = 96/157 (61.15%), Postives = 128/157 (81.53%), Query Frame = 0


Query: 5   QNPQQLQAI------SKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVRLGRVQEESR 64
           Q PQQ+ ++      SKED+EM++SAL+AFR KE+EI++ + E+  +++ +LGRV+EE+R
Sbjct: 10  QPPQQMMSLSFSSQMSKEDEEMARSALSAFRAKEDEIEKRKMEVRERVKAQLGRVEEETR 69

Query: 65  RLTTFREELEAIGGDPMRKEIGQIRKKIDALNKELKPLGLTCQKKEKEYKDALDVFNEKN 124
           RL + REELE +  DPMRKE+  +RKKID++NKELKPLG T QKKE+EYK+ALD FNEKN
Sbjct: 70  RLASIREELETM-ADPMRKEVNWVRKKIDSVNKELKPLGSTVQKKEREYKEALDTFNEKN 129

Query: 125 NEKVQLISKLMEM---VGESEKLRLKRLEELSKHVDS 153
            EKVQLI+KLMEM   VGESEKLRLK+L+ELS+ +D+
Sbjct: 130 REKVQLITKLMEMGQLVGESEKLRLKKLDELSRSIDT 165

[Close]

BLAST of HG10016995 vs. TAIR 10
Match: AT2G36410.3 (Family of unknown function (DUF662) )

HSP 1 Score: 171.8 bits (434), Expect = 4.3e-43
Identity = 89/140 (63.57%), Postives = 121/140 (86.43%), Query Frame = 0


Query: 13  ISKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVRLGRVQEESRRLTTFREELEAIGG 72
           +S+ED+EM++SAL+AFR KE+EI++ R E+  ++Q +LGRV++E++RL+T REELE++  
Sbjct: 53  MSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLSTIREELESM-A 112

Query: 73  DPMRKEIGQIRKKIDALNKELKPLGLTCQKKEKEYKDALDVFNEKNNEKVQLISKLMEMV 132
           DPMRKE+  +RKKID++NKELKPLG T QKK  EYK+ALD FNEKN EKVQLI+KLME+V
Sbjct: 113 DPMRKEVSVVRKKIDSVNKELKPLGSTVQKKVMEYKEALDTFNEKNREKVQLITKLMELV 172

Query: 133 GESEKLRLKRLEELSKHVDS 153
           GESEKLR+ +LEELSK +++
Sbjct: 173 GESEKLRMIKLEELSKSIET 191

The following BLAST results are available for this feature:

BLAST of HG10016995 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882826.1	1.6e-63	85.28	uncharacterized protein LOC120073968 isoform X1 [Benincasa hispida]	[more]
XP_008462544.1	2.1e-63	86.59	PREDICTED: uncharacterized protein LOC103500877 [Cucumis melo]	[more]
XP_004143305.1	4.6e-63	86.59	uncharacterized protein LOC101209289 [Cucumis sativus] >KGN48239.1 hypothetical ...	[more]
KAA0025281.1	4.4e-58	83.54	putative DNA double-strand break repair Rad50 ATPase isoform X2 [Cucumis melo va...	[more]
XP_023543803.1	1.9e-56	77.91	uncharacterized protein LOC111803564 [Cucurbita pepo subsp. pepo] >KAG7034517.1 ...	[more]

BLAST of HG10016995 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10016995 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CIS0	1.0e-63	86.59	RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103500877 PE=3 SV=1	[more]
A0A0A0KHE9	2.2e-63	86.59	RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_6G450440 PE=3 SV=1	[more]
A0A5A7SM04	2.1e-58	83.54	RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1IS07	9.0e-57	77.91	RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111478791 PE=3 SV=1	[more]
A0A6J1EJF7	5.8e-56	77.30	RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111433155 PE=3 SV=1	[more]

BLAST of HG10016995 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09980.1	3.5e-45	65.00	Family of unknown function (DUF662)	[more]
AT3G52920.2	7.8e-45	61.69	Family of unknown function (DUF662)	[more]
AT2G36410.2	3.0e-44	64.29	Family of unknown function (DUF662)	[more]
AT3G52920.1	1.5e-43	61.15	Family of unknown function (DUF662)	[more]
AT2G36410.3	4.3e-43	63.57	Family of unknown function (DUF662)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 21..48
None	No IPR available	COILS	Coil	Coil	coord: 100..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR21470:SF8	EXPRESSED PROTEIN	coord: 13..151
IPR007033	RAB6-interacting golgin	PFAM	PF04949	Transcrip_act	coord: 8..152 e-value: 7.7E-61 score: 204.5
IPR007033	RAB6-interacting golgin	PANTHER	PTHR21470	RAB6-INTERACTING PROTEIN GORAB	coord: 13..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10016995.1	HG10016995.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005794	Golgi apparatus