HG10016952 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGACTGTGGCTGAACCCTCTCCCTCGCGGCCAGCTAGCAACTAGCGCCTGCTTCTTTGTCGCCGGAGTCTCCTTCTTCGCCGCCGGAGCTTACCTCTCTTTCCTCAACATCGCCCCTCAGCAAGCTCGAACCAAAGCTCGTGATGATTTTGTCAAGGAGCGTTTGAGGAAGCGTCACCACGATTAA ATGGGACTGTGGCTGAACCCTCTCCCTCGCGGCCAGCTAGCAACTAGCGCCTGCTTCTTTGTCGCCGGAGTCTCCTTCTTCGCCGCCGGAGCTTACCTCTCTTTCCTCAACATCGCCCCTCAGCAAGCTCGAACCAAAGCTCGTGATGATTTTGTCAAGGAGCGTTTGAGGAAGCGTCACCACGATTAA ATGGGACTGTGGCTGAACCCTCTCCCTCGCGGCCAGCTAGCAACTAGCGCCTGCTTCTTTGTCGCCGGAGTCTCCTTCTTCGCCGCCGGAGCTTACCTCTCTTTCCTCAACATCGCCCCTCAGCAAGCTCGAACCAAAGCTCGTGATGATTTTGTCAAGGAGCGTTTGAGGAAGCGTCACCACGATTAA MGLWLNPLPRGQLATSACFFVAGVSFFAAGAYLSFLNIAPQQARTKARDDFVKERLRKRHHD Homology
BLAST of HG10016952 vs. NCBI nr
Match: XP_038880929.1 (uncharacterized protein LOC120072605 [Benincasa hispida] >XP_038880930.1 uncharacterized protein LOC120072605 [Benincasa hispida]) HSP 1 Score: 127.5 bits (319), Expect = 4.0e-26 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0
BLAST of HG10016952 vs. NCBI nr
Match: XP_022132375.1 (uncharacterized protein LOC111005249 [Momordica charantia]) HSP 1 Score: 121.3 bits (303), Expect = 2.9e-24 Identity = 58/62 (93.55%), Postives = 60/62 (96.77%), Query Frame = 0
BLAST of HG10016952 vs. NCBI nr
Match: XP_023517718.1 (uncharacterized protein LOC111781390 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 110.9 bits (276), Expect = 3.9e-21 Identity = 50/62 (80.65%), Postives = 56/62 (90.32%), Query Frame = 0
BLAST of HG10016952 vs. NCBI nr
Match: XP_016902886.1 (PREDICTED: uncharacterized protein LOC103500918 [Cucumis melo] >KAA0025233.1 hypothetical protein E6C27_scaffold541G00820 [Cucumis melo var. makuwa] >TYK07433.1 hypothetical protein E5676_scaffold202G001620 [Cucumis melo var. makuwa]) HSP 1 Score: 110.5 bits (275), Expect = 5.1e-21 Identity = 52/60 (86.67%), Postives = 56/60 (93.33%), Query Frame = 0
BLAST of HG10016952 vs. NCBI nr
Match: XP_022962859.1 (uncharacterized protein LOC111463226 [Cucurbita moschata]) HSP 1 Score: 108.2 bits (269), Expect = 2.5e-20 Identity = 50/62 (80.65%), Postives = 55/62 (88.71%), Query Frame = 0
BLAST of HG10016952 vs. ExPASy TrEMBL
Match: A0A6J1BSA7 (uncharacterized protein LOC111005249 OS=Momordica charantia OX=3673 GN=LOC111005249 PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.4e-24 Identity = 58/62 (93.55%), Postives = 60/62 (96.77%), Query Frame = 0
BLAST of HG10016952 vs. ExPASy TrEMBL
Match: A0A5D3C6A0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001620 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.5e-21 Identity = 52/60 (86.67%), Postives = 56/60 (93.33%), Query Frame = 0
BLAST of HG10016952 vs. ExPASy TrEMBL
Match: A0A1S4E3S6 (uncharacterized protein LOC103500918 OS=Cucumis melo OX=3656 GN=LOC103500918 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.5e-21 Identity = 52/60 (86.67%), Postives = 56/60 (93.33%), Query Frame = 0
BLAST of HG10016952 vs. ExPASy TrEMBL
Match: A0A6J1HI96 (uncharacterized protein LOC111463226 OS=Cucurbita moschata OX=3662 GN=LOC111463226 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.2e-20 Identity = 50/62 (80.65%), Postives = 55/62 (88.71%), Query Frame = 0
BLAST of HG10016952 vs. ExPASy TrEMBL
Match: A0A0A0KEZ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454330 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 6.3e-17 Identity = 46/59 (77.97%), Postives = 51/59 (86.44%), Query Frame = 0
BLAST of HG10016952 vs. TAIR 10
Match: AT3G11591.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 68.9 bits (167), Expect = 1.6e-12 Identity = 35/52 (67.31%), Postives = 39/52 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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