HG10016082 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10016082
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	E3 ubiquitin-protein ligase RMA1H1-like
Location	Chr03: 2681310 .. 2682035 (+)
RNA-Seq Expression	HG10016082
Synteny	HG10016082

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTTTGAGCAGTACTTTGCGCAAGGATGGACACATGTTTCTGGTACAGGAGGCACAGATCGAGAAAACTACAAGGGTTGTTTTGATTGTAACATCTGCTTAGACTTTGCCCATGAGCCAGTGGTTACTCTCTGTGGCCACTTATACTGCTGGCCTTGCATCTATAAATGGCTTCACATCCAGAGTGCCTCTCTTGCCATTGACGAGCGCCCACAGTGCCCGGTTTGCAAGGCTGATATTTCCCACACCACAATGGTTCCTCTCTACGGTCGTGGCCAAACGGCCGAGGAAGTCGAGCCTGAAGCCAAAGCAATGCATCATGACATTAATATACCTCCTAGGCCTTCAGCTTGTGGTAACCAGATGCTTGCTACTTCCAGCACACACCAACAGCAACTTCCATATCGAAATCCTTACCAGCGACCGAACCACGACCCCTTTCTTTTTGGCAATTATGAAGAAGATTCAGCAGCCCCTTTGCTAAACCTTGCAAGAACATCATTCAGTGGTTTTCACCATCCGGTGGTCGGAATGATTGGCGATTTCGTGCACACGAGGGTCTTTGGGAACTCGGATAACTTATACTCTTACCGAAACTCTTACCAGCTAACCGGGAGCAGTAGGAACCGGATGAGAAGACAGGAAATGCAGGTAGACAAGTCATTGAACAGAATCTCCATTTTCCTCTTCTGCTGTGTAATTCTATGTGTTCTCGTCTTCTAA

mRNA sequence

ATGGCCTTTGAGCAGTACTTTGCGCAAGGATGGACACATGTTTCTGGTACAGGAGGCACAGATCGAGAAAACTACAAGGGTTGTTTTGATTGTAACATCTGCTTAGACTTTGCCCATGAGCCAGTGGTTACTCTCTGTGGCCACTTATACTGCTGGCCTTGCATCTATAAATGGCTTCACATCCAGAGTGCCTCTCTTGCCATTGACGAGCGCCCACAGTGCCCGGTTTGCAAGGCTGATATTTCCCACACCACAATGGTTCCTCTCTACGGTCGTGGCCAAACGGCCGAGGAAGTCGAGCCTGAAGCCAAAGCAATGCATCATGACATTAATATACCTCCTAGGCCTTCAGCTTGTGGTAACCAGATGCTTGCTACTTCCAGCACACACCAACAGCAACTTCCATATCGAAATCCTTACCAGCGACCGAACCACGACCCCTTTCTTTTTGGCAATTATGAAGAAGATTCAGCAGCCCCTTTGCTAAACCTTGCAAGAACATCATTCAGTGGTTTTCACCATCCGGTGGTCGGAATGATTGGCGATTTCGTGCACACGAGGGTCTTTGGGAACTCGGATAACTTATACTCTTACCGAAACTCTTACCAGCTAACCGGGAGCAGTAGGAACCGGATGAGAAGACAGGAAATGCAGGTAGACAAGTCATTGAACAGAATCTCCATTTTCCTCTTCTGCTGTGTAATTCTATGTGTTCTCGTCTTCTAA

Coding sequence (CDS)

ATGGCCTTTGAGCAGTACTTTGCGCAAGGATGGACACATGTTTCTGGTACAGGAGGCACAGATCGAGAAAACTACAAGGGTTGTTTTGATTGTAACATCTGCTTAGACTTTGCCCATGAGCCAGTGGTTACTCTCTGTGGCCACTTATACTGCTGGCCTTGCATCTATAAATGGCTTCACATCCAGAGTGCCTCTCTTGCCATTGACGAGCGCCCACAGTGCCCGGTTTGCAAGGCTGATATTTCCCACACCACAATGGTTCCTCTCTACGGTCGTGGCCAAACGGCCGAGGAAGTCGAGCCTGAAGCCAAAGCAATGCATCATGACATTAATATACCTCCTAGGCCTTCAGCTTGTGGTAACCAGATGCTTGCTACTTCCAGCACACACCAACAGCAACTTCCATATCGAAATCCTTACCAGCGACCGAACCACGACCCCTTTCTTTTTGGCAATTATGAAGAAGATTCAGCAGCCCCTTTGCTAAACCTTGCAAGAACATCATTCAGTGGTTTTCACCATCCGGTGGTCGGAATGATTGGCGATTTCGTGCACACGAGGGTCTTTGGGAACTCGGATAACTTATACTCTTACCGAAACTCTTACCAGCTAACCGGGAGCAGTAGGAACCGGATGAGAAGACAGGAAATGCAGGTAGACAAGTCATTGAACAGAATCTCCATTTTCCTCTTCTGCTGTGTAATTCTATGTGTTCTCGTCTTCTAA

Protein sequence

MAFEQYFAQGWTHVSGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHIQSASLAIDERPQCPVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACGNQMLATSSTHQQQLPYRNPYQRPNHDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMIGDFVHTRVFGNSDNLYSYRNSYQLTGSSRNRMRRQEMQVDKSLNRISIFLFCCVILCVLVF

Homology

[Close]

BLAST of HG10016082 vs. NCBI nr
Match: XP_038881993.1 (E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida] >XP_038881994.1 E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida] >XP_038881995.1 E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida] >XP_038881996.1 E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida] >XP_038881997.1 E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida] >XP_038881998.1 E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida])

HSP 1 Score: 499.2 bits (1284), Expect = 2.0e-137
Identity = 231/241 (95.85%), Postives = 235/241 (97.51%), Query Frame = 0


Query: 1   MAFEQYFAQGWTHVSGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MAFEQYFAQGW HVSGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 1   MAFEQYFAQGWKHVSGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60

Query: 61  IQSASLAIDERPQCPVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACG 120
           +QSASLAIDE PQCPVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACG
Sbjct: 61  VQSASLAIDEHPQCPVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACG 120

Query: 121 NQMLATSSTHQQQLPYRNPYQRPNHDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMI 180
           NQMLAT S HQQQLPYRNPYQ+PNHDP LFGNYEEDSAAPLLNLARTSFSGFHHP+VGMI
Sbjct: 121 NQMLATPSIHQQQLPYRNPYQQPNHDPLLFGNYEEDSAAPLLNLARTSFSGFHHPLVGMI 180

Query: 181 GDFVHTRVFGNSDNLYSYRNSYQLTGSSRNRMRRQEMQVDKSLNRISIFLFCCVILCVLV 240
           GDFVH RVFGNSDNLYSYRNSYQLTGSSRNR+RRQEMQVDKSLNRISIFLFCCVILCVLV
Sbjct: 181 GDFVHARVFGNSDNLYSYRNSYQLTGSSRNRLRRQEMQVDKSLNRISIFLFCCVILCVLV 240

Query: 241 F 242
           F
Sbjct: 241 F 241

[Close]

BLAST of HG10016082 vs. NCBI nr
Match: XP_004134707.1 (E3 ubiquitin-protein ligase RMA1H1 isoform X2 [Cucumis sativus] >XP_031743484.1 E3 ubiquitin-protein ligase RMA1H1 isoform X2 [Cucumis sativus] >XP_031743485.1 E3 ubiquitin-protein ligase RMA1H1 isoform X2 [Cucumis sativus] >XP_031743486.1 E3 ubiquitin-protein ligase RMA1H1 isoform X2 [Cucumis sativus] >XP_031743487.1 E3 ubiquitin-protein ligase RMA1H1 isoform X2 [Cucumis sativus] >XP_031743488.1 E3 ubiquitin-protein ligase RMA1H1 isoform X2 [Cucumis sativus] >KGN49224.1 hypothetical protein Csa_003905 [Cucumis sativus])

HSP 1 Score: 481.5 bits (1238), Expect = 4.3e-132
Identity = 225/241 (93.36%), Postives = 230/241 (95.44%), Query Frame = 0


Query: 1   MAFEQYFAQGWTHVSGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MAFEQYFAQGW HVS   GT+RENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 1   MAFEQYFAQGWKHVS---GTERENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60

Query: 61  IQSASLAIDERPQCPVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACG 120
           +QSASLAIDE PQCPVCKADISHTTMVPLYGRGQTAEEVEPE KAMHHDINIPPRPSACG
Sbjct: 61  VQSASLAIDEHPQCPVCKADISHTTMVPLYGRGQTAEEVEPEDKAMHHDINIPPRPSACG 120

Query: 121 NQMLATSSTHQQQLPYRNPYQRPNHDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMI 180
           NQ+LAT STHQQQLPYRNPYQRPNHDP LF NYEEDSA+PLLNLARTSFS FHHPVVGMI
Sbjct: 121 NQILATPSTHQQQLPYRNPYQRPNHDPLLFANYEEDSASPLLNLARTSFSSFHHPVVGMI 180

Query: 181 GDFVHTRVFGNSDNLYSYRNSYQLTGSSRNRMRRQEMQVDKSLNRISIFLFCCVILCVLV 240
           GDFVH RVFGNSDNLYSYRNSYQLTGSSRNR+RRQEMQVDKSLNRISIFLFCCVILCVLV
Sbjct: 181 GDFVHARVFGNSDNLYSYRNSYQLTGSSRNRLRRQEMQVDKSLNRISIFLFCCVILCVLV 238

Query: 241 F 242
           F
Sbjct: 241 F 238

[Close]

BLAST of HG10016082 vs. NCBI nr
Match: XP_004134706.1 (E3 ubiquitin-protein ligase RMA1H1 isoform X1 [Cucumis sativus] >XP_031743482.1 E3 ubiquitin-protein ligase RMA1H1 isoform X1 [Cucumis sativus] >XP_031743483.1 E3 ubiquitin-protein ligase RMA1H1 isoform X1 [Cucumis sativus])

HSP 1 Score: 481.5 bits (1238), Expect = 4.3e-132
Identity = 225/241 (93.36%), Postives = 230/241 (95.44%), Query Frame = 0


Query: 1   MAFEQYFAQGWTHVSGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MAFEQYFAQGW HVS   GT+RENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 20  MAFEQYFAQGWKHVS---GTERENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 79

Query: 61  IQSASLAIDERPQCPVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACG 120
           +QSASLAIDE PQCPVCKADISHTTMVPLYGRGQTAEEVEPE KAMHHDINIPPRPSACG
Sbjct: 80  VQSASLAIDEHPQCPVCKADISHTTMVPLYGRGQTAEEVEPEDKAMHHDINIPPRPSACG 139

Query: 121 NQMLATSSTHQQQLPYRNPYQRPNHDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMI 180
           NQ+LAT STHQQQLPYRNPYQRPNHDP LF NYEEDSA+PLLNLARTSFS FHHPVVGMI
Sbjct: 140 NQILATPSTHQQQLPYRNPYQRPNHDPLLFANYEEDSASPLLNLARTSFSSFHHPVVGMI 199

Query: 181 GDFVHTRVFGNSDNLYSYRNSYQLTGSSRNRMRRQEMQVDKSLNRISIFLFCCVILCVLV 240
           GDFVH RVFGNSDNLYSYRNSYQLTGSSRNR+RRQEMQVDKSLNRISIFLFCCVILCVLV
Sbjct: 200 GDFVHARVFGNSDNLYSYRNSYQLTGSSRNRLRRQEMQVDKSLNRISIFLFCCVILCVLV 257

Query: 241 F 242
           F
Sbjct: 260 F 257

[Close]

BLAST of HG10016082 vs. NCBI nr
Match: XP_008439861.1 (PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Cucumis melo] >KAA0052689.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucumis melo var. makuwa] >TYK13135.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucumis melo var. makuwa])

HSP 1 Score: 472.2 bits (1214), Expect = 2.6e-129
Identity = 222/241 (92.12%), Postives = 227/241 (94.19%), Query Frame = 0


Query: 1   MAFEQYFAQGWTHVSGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MAF+QYFAQGW HVS   GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 1   MAFDQYFAQGWKHVS---GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60

Query: 61  IQSASLAIDERPQCPVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACG 120
           +QSASLAIDE PQCPVCKADISHTTMVPLYGRGQ AEEVE EAKAMH DINIPPRPSACG
Sbjct: 61  VQSASLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEVELEAKAMHRDINIPPRPSACG 120

Query: 121 NQMLATSSTHQQQLPYRNPYQRPNHDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMI 180
           NQ+LAT STHQQQLPYRNPYQRPNHDP LF NYEE SA+PLLNLARTSFS FHHPVVGMI
Sbjct: 121 NQILATPSTHQQQLPYRNPYQRPNHDPLLFANYEEHSASPLLNLARTSFSSFHHPVVGMI 180

Query: 181 GDFVHTRVFGNSDNLYSYRNSYQLTGSSRNRMRRQEMQVDKSLNRISIFLFCCVILCVLV 240
           GDFVH RVFGNSDNLYSYRNSYQLTGSSRNR+RRQEMQVDKSLNRISIFLFCCVILCVLV
Sbjct: 181 GDFVHARVFGNSDNLYSYRNSYQLTGSSRNRLRRQEMQVDKSLNRISIFLFCCVILCVLV 238

Query: 241 F 242
           F
Sbjct: 241 F 238

[Close]

BLAST of HG10016082 vs. NCBI nr
Match: XP_023003183.1 (E3 ubiquitin-protein ligase RMA1H1-like isoform X1 [Cucurbita maxima] >XP_023003184.1 E3 ubiquitin-protein ligase RMA1H1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 454.9 bits (1169), Expect = 4.3e-124
Identity = 211/242 (87.19%), Postives = 224/242 (92.56%), Query Frame = 0


Query: 1   MAFEQYFAQGWTHVSGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MA+EQ FAQGW HVSGTGGTDRE YKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 1   MAYEQCFAQGWKHVSGTGGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60

Query: 61  IQSASLAIDERPQCPVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHD-INIPPRPSAC 120
           ++S SLAIDE PQCPVCKADISHTTMVPLYGRGQ AEEV PEA+A+H D ++IPPRPSAC
Sbjct: 61  VKSVSLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEVGPEAQALHQDNVDIPPRPSAC 120

Query: 121 GNQMLATSSTHQQQLPYRNPYQRPNHDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGM 180
           GNQ+LAT STHQQQL YRNPYQRPNHDP LFGNYEEDS AP LNLARTSFSGFHHPVVGM
Sbjct: 121 GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEEDSPAPSLNLARTSFSGFHHPVVGM 180

Query: 181 IGDFVHTRVFGNSDNLYSYRNSYQLTGSSRNRMRRQEMQVDKSLNRISIFLFCCVILCVL 240
           IGDF++ RVFGNSDNLYSY+NSY LTGS RNR+RRQEMQ +KSLNRISIFLFCCVILCVL
Sbjct: 181 IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVL 240

Query: 241 VF 242
           VF
Sbjct: 241 VF 242

[Close]

BLAST of HG10016082 vs. ExPASy Swiss-Prot
Match: Q6R567 (E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 8.0e-49
Identity = 107/228 (46.93%), Postives = 144/228 (63.16%), Query Frame = 0


Query: 23  ENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHIQSASL--AIDERPQCPVCKAD 82
           EN  G FDCNICLD  HEPV+TLCGHLYCWPCIYKW++ QS S   +  ++PQCPVCKA+
Sbjct: 33  ENISGGFDCNICLDCVHEPVITLCGHLYCWPCIYKWIYFQSVSSENSDQQQPQCPVCKAE 92

Query: 83  ISHTTMVPLYGRGQTAEEVEP-EAKAMHHDINIPPRPSA--CGNQ-MLATSSTHQQQLPY 142
           +S  T++PLYGRG   +  +P E KA +  I IP RP +  CG   +L T+ ++  QL  
Sbjct: 93  VSEKTLIPLYGRG--GQSTKPSEGKAPNLGIVIPQRPPSPRCGGHFLLPTTDSNPSQLLQ 152

Query: 143 RNPYQRPN--HDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMIGDFVHTRVFGNSD- 202
           R  YQ+ +    P   G+Y    ++P+L+    + +   H    MIG+  + R+FGNS  
Sbjct: 153 RRGYQQQSQTRQPAYQGSY---MSSPMLSPGGATANMLQH---SMIGEVAYARIFGNSST 212

Query: 203 NLYSYRNSYQLTGSSRNRMRRQEMQVDKSLNRISIFLFCCVILCVLVF 242
            +Y+Y NSY L  SS  RMRRQ  Q D+SL RI  FLFCC + C+++F
Sbjct: 213 TMYTYPNSYNLAISSSPRMRRQLSQADRSLGRICFFLFCCFVTCLILF 252

[Close]

BLAST of HG10016082 vs. ExPASy Swiss-Prot
Match: Q8GUK7 (E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 6.0e-44
Identity = 101/227 (44.49%), Postives = 137/227 (60.35%), Query Frame = 0


Query: 24  NYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHIQSASLAIDE-RPQCPVCKADIS 83
           N  GCFDCNICLD AH+PVVTLCGHL+CWPCIYKWLH+Q +S+++D+ +  CPVCK++I+
Sbjct: 37  NESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQNNCPVCKSNIT 96

Query: 84  HTTMVPLYGRGQTAEEVEPEAK---AMHHDINIPPRPSACGNQMLATSS-----THQQQL 143
            T++VPLYGRG ++      +K   A+  DI   P PSA  N + + SS      HQ   
Sbjct: 97  ITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPITSASSLNPSLQHQTLS 156

Query: 144 PYRNPYQRPNHDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMIGDFVHTRVFGNSDN 203
           P  + +Q   + P  F   E        +LA      F +PV+GM GD V+TR+FG   N
Sbjct: 157 PSFHNHQ---YSPRGFTTTES------TDLANAVMMSFLYPVIGMFGDLVYTRIFGTFTN 216

Query: 204 LYSYRNSYQLTGSSRNRMRRQEMQVDKSLNRISIFLFCCVILCVLVF 242
             +    YQ          ++ MQ +KSLNR+SIF  CC+ILC+L+F
Sbjct: 217 --TIAQPYQ---------SQRMMQREKSLNRVSIFFLCCIILCLLLF 243

[Close]

BLAST of HG10016082 vs. ExPASy Swiss-Prot
Match: O64425 (E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.0e-39
Identity = 88/216 (40.74%), Postives = 126/216 (58.33%), Query Frame = 0


Query: 29  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHIQSASLA--IDERPQCPVCKADISHTTM 88
           FDCNICLD   EPVVTLCGHL+CWPCI+KWL +QS S +       QCPVCK+ +SH+T+
Sbjct: 46  FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHSTL 105

Query: 89  VPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACGNQMLATSSTHQQQLPYRNPYQRPNHD 148
           VPLYGRG+   + E +       +    R     +   +T     Q++ + +P +     
Sbjct: 106 VPLYGRGRCTTQEEGKNSVPKRPVGPVYRLEMPNSPYASTDLRLSQRVHFNSPQE----- 165

Query: 149 PFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMIGDFVHTRVFGNS-DNLYSYRNSYQLT 208
               G Y     + +++    S+S    PV+ M+G+ V TR+FG    + ++Y ++Y L 
Sbjct: 166 ----GYY---PVSGVMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLA 225

Query: 209 GSSRNRMRRQEMQVDKSLNRISIFLFCCVILCVLVF 242
           G+S  RMRR+ MQ DKSL RI  F  CCV+LC+L+F
Sbjct: 226 GTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

[Close]

BLAST of HG10016082 vs. ExPASy Swiss-Prot
Match: P93030 (E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.2e-28
Identity = 77/223 (34.53%), Postives = 113/223 (50.67%), Query Frame = 0


Query: 27  GCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHIQSAS-LAID------ERPQCPVCKA 86
           G FDCNICLD   +PVVTLCGHL+CWPCI+KW +  + S   +D      E P+CPVCK+
Sbjct: 17  GDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKS 76

Query: 87  DISHTTMVPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACGNQMLATSSTHQQQLPYRNP 146
           D+S  T+VP+YGRGQ         KA     N+P RP+     +        +    R  
Sbjct: 77  DVSEATLVPIYGRGQ---------KAPQSGSNVPSRPTGPVYDLRGVGQRLGEGESQRYM 136

Query: 147 YQRPNHDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMIGDFVHTRVFG-NSDNLYSY 206
           Y+ P+                              PV+G++ + V+ R+FG +S N+  Y
Sbjct: 137 YRMPD------------------------------PVMGVVCEMVYRRLFGESSSNMAPY 193

Query: 207 RNSYQLTGSSRNRMRRQEMQVDKSLNRISIFLFCCVILCVLVF 242
           R+          R RR+ MQ ++SL+R+ +FL C + +C+ +F
Sbjct: 197 RD-------MNVRSRRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

[Close]

BLAST of HG10016082 vs. ExPASy Swiss-Prot
Match: Q5ZIR9 (E3 ubiquitin-protein ligase RNF185 OS=Gallus gallus OX=9031 GN=RNF185 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.7e-20
Identity = 46/102 (45.10%), Postives = 60/102 (58.82%), Query Frame = 0


Query: 15  SGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHIQSASLAIDERPQC 74
           S  G  D  N    F+CNICLD A + V++LCGHL+CWPC+++WL  +        R  C
Sbjct: 25  SSNGAGDNTNQDNTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETR------PNRQVC 84

Query: 75  PVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHDINIPPRP 117
           PVCKA IS   ++PLYGRG T ++ +P  K        PPRP
Sbjct: 85  PVCKAGISRDKVIPLYGRGSTGQQ-DPREKT-------PPRP 112

[Close]

BLAST of HG10016082 vs. ExPASy TrEMBL
Match: A0A0A0KK60 (Rnf5 OS=Cucumis sativus OX=3659 GN=Csa_6G517320 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.1e-132
Identity = 225/241 (93.36%), Postives = 230/241 (95.44%), Query Frame = 0


Query: 1   MAFEQYFAQGWTHVSGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MAFEQYFAQGW HVS   GT+RENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 1   MAFEQYFAQGWKHVS---GTERENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60

Query: 61  IQSASLAIDERPQCPVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACG 120
           +QSASLAIDE PQCPVCKADISHTTMVPLYGRGQTAEEVEPE KAMHHDINIPPRPSACG
Sbjct: 61  VQSASLAIDEHPQCPVCKADISHTTMVPLYGRGQTAEEVEPEDKAMHHDINIPPRPSACG 120

Query: 121 NQMLATSSTHQQQLPYRNPYQRPNHDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMI 180
           NQ+LAT STHQQQLPYRNPYQRPNHDP LF NYEEDSA+PLLNLARTSFS FHHPVVGMI
Sbjct: 121 NQILATPSTHQQQLPYRNPYQRPNHDPLLFANYEEDSASPLLNLARTSFSSFHHPVVGMI 180

Query: 181 GDFVHTRVFGNSDNLYSYRNSYQLTGSSRNRMRRQEMQVDKSLNRISIFLFCCVILCVLV 240
           GDFVH RVFGNSDNLYSYRNSYQLTGSSRNR+RRQEMQVDKSLNRISIFLFCCVILCVLV
Sbjct: 181 GDFVHARVFGNSDNLYSYRNSYQLTGSSRNRLRRQEMQVDKSLNRISIFLFCCVILCVLV 238

Query: 241 F 242
           F
Sbjct: 241 F 238

[Close]

BLAST of HG10016082 vs. ExPASy TrEMBL
Match: A0A5A7UGP7 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007450 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.3e-129
Identity = 222/241 (92.12%), Postives = 227/241 (94.19%), Query Frame = 0


Query: 1   MAFEQYFAQGWTHVSGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MAF+QYFAQGW HVS   GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 1   MAFDQYFAQGWKHVS---GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60

Query: 61  IQSASLAIDERPQCPVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACG 120
           +QSASLAIDE PQCPVCKADISHTTMVPLYGRGQ AEEVE EAKAMH DINIPPRPSACG
Sbjct: 61  VQSASLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEVELEAKAMHRDINIPPRPSACG 120

Query: 121 NQMLATSSTHQQQLPYRNPYQRPNHDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMI 180
           NQ+LAT STHQQQLPYRNPYQRPNHDP LF NYEE SA+PLLNLARTSFS FHHPVVGMI
Sbjct: 121 NQILATPSTHQQQLPYRNPYQRPNHDPLLFANYEEHSASPLLNLARTSFSSFHHPVVGMI 180

Query: 181 GDFVHTRVFGNSDNLYSYRNSYQLTGSSRNRMRRQEMQVDKSLNRISIFLFCCVILCVLV 240
           GDFVH RVFGNSDNLYSYRNSYQLTGSSRNR+RRQEMQVDKSLNRISIFLFCCVILCVLV
Sbjct: 181 GDFVHARVFGNSDNLYSYRNSYQLTGSSRNRLRRQEMQVDKSLNRISIFLFCCVILCVLV 238

Query: 241 F 242
           F
Sbjct: 241 F 238

[Close]

BLAST of HG10016082 vs. ExPASy TrEMBL
Match: A0A1S3AZB8 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucumis melo OX=3656 GN=LOC103484523 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.3e-129
Identity = 222/241 (92.12%), Postives = 227/241 (94.19%), Query Frame = 0


Query: 1   MAFEQYFAQGWTHVSGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MAF+QYFAQGW HVS   GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 1   MAFDQYFAQGWKHVS---GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60

Query: 61  IQSASLAIDERPQCPVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACG 120
           +QSASLAIDE PQCPVCKADISHTTMVPLYGRGQ AEEVE EAKAMH DINIPPRPSACG
Sbjct: 61  VQSASLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEVELEAKAMHRDINIPPRPSACG 120

Query: 121 NQMLATSSTHQQQLPYRNPYQRPNHDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMI 180
           NQ+LAT STHQQQLPYRNPYQRPNHDP LF NYEE SA+PLLNLARTSFS FHHPVVGMI
Sbjct: 121 NQILATPSTHQQQLPYRNPYQRPNHDPLLFANYEEHSASPLLNLARTSFSSFHHPVVGMI 180

Query: 181 GDFVHTRVFGNSDNLYSYRNSYQLTGSSRNRMRRQEMQVDKSLNRISIFLFCCVILCVLV 240
           GDFVH RVFGNSDNLYSYRNSYQLTGSSRNR+RRQEMQVDKSLNRISIFLFCCVILCVLV
Sbjct: 181 GDFVHARVFGNSDNLYSYRNSYQLTGSSRNRLRRQEMQVDKSLNRISIFLFCCVILCVLV 238

Query: 241 F 242
           F
Sbjct: 241 F 238

[Close]

BLAST of HG10016082 vs. ExPASy TrEMBL
Match: A0A6J1KVR4 (E3 ubiquitin-protein ligase RMA1H1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496874 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.1e-124
Identity = 211/242 (87.19%), Postives = 224/242 (92.56%), Query Frame = 0


Query: 1   MAFEQYFAQGWTHVSGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MA+EQ FAQGW HVSGTGGTDRE YKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 1   MAYEQCFAQGWKHVSGTGGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60

Query: 61  IQSASLAIDERPQCPVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHD-INIPPRPSAC 120
           ++S SLAIDE PQCPVCKADISHTTMVPLYGRGQ AEEV PEA+A+H D ++IPPRPSAC
Sbjct: 61  VKSVSLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEVGPEAQALHQDNVDIPPRPSAC 120

Query: 121 GNQMLATSSTHQQQLPYRNPYQRPNHDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGM 180
           GNQ+LAT STHQQQL YRNPYQRPNHDP LFGNYEEDS AP LNLARTSFSGFHHPVVGM
Sbjct: 121 GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEEDSPAPSLNLARTSFSGFHHPVVGM 180

Query: 181 IGDFVHTRVFGNSDNLYSYRNSYQLTGSSRNRMRRQEMQVDKSLNRISIFLFCCVILCVL 240
           IGDF++ RVFGNSDNLYSY+NSY LTGS RNR+RRQEMQ +KSLNRISIFLFCCVILCVL
Sbjct: 181 IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVL 240

Query: 241 VF 242
           VF
Sbjct: 241 VF 242

[Close]

BLAST of HG10016082 vs. ExPASy TrEMBL
Match: A0A6J1EI23 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita moschata OX=3662 GN=LOC111433592 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.1e-122
Identity = 209/242 (86.36%), Postives = 221/242 (91.32%), Query Frame = 0


Query: 1   MAFEQYFAQGWTHVSGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MA+EQ FAQGW HVSGTGGTDRE  KGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 1   MAYEQCFAQGWKHVSGTGGTDRETNKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60

Query: 61  IQSASLAIDERPQCPVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHD-INIPPRPSAC 120
           ++S SLAIDE+PQCPVCKADISHTTMVPLYGRGQ AEEV PEAKAMH D ++IPPRPSAC
Sbjct: 61  VKSVSLAIDEQPQCPVCKADISHTTMVPLYGRGQMAEEVRPEAKAMHQDNVDIPPRPSAC 120

Query: 121 GNQMLATSSTHQQQLPYRNPYQRPNHDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGM 180
           GNQ+LAT STHQQQL YRNPYQRPNHDP LFGNYEED  AP LNL RTS SGFHHPVVGM
Sbjct: 121 GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEEDLPAPSLNLGRTSLSGFHHPVVGM 180

Query: 181 IGDFVHTRVFGNSDNLYSYRNSYQLTGSSRNRMRRQEMQVDKSLNRISIFLFCCVILCVL 240
           IGDF++ RVFGNSDNLYSY+NSY LTGS RNR+RRQEMQ +KSLNRISIFLFCCVILCVL
Sbjct: 181 IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVL 240

Query: 241 VF 242
           VF
Sbjct: 241 VF 242

[Close]

BLAST of HG10016082 vs. TAIR 10
Match: AT4G27470.1 (RING membrane-anchor 3 )

HSP 1 Score: 179.1 bits (453), Expect = 4.2e-45
Identity = 101/227 (44.49%), Postives = 137/227 (60.35%), Query Frame = 0


Query: 24  NYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHIQSASLAIDE-RPQCPVCKADIS 83
           N  GCFDCNICLD AH+PVVTLCGHL+CWPCIYKWLH+Q +S+++D+ +  CPVCK++I+
Sbjct: 37  NESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQNNCPVCKSNIT 96

Query: 84  HTTMVPLYGRGQTAEEVEPEAK---AMHHDINIPPRPSACGNQMLATSS-----THQQQL 143
            T++VPLYGRG ++      +K   A+  DI   P PSA  N + + SS      HQ   
Sbjct: 97  ITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPITSASSLNPSLQHQTLS 156

Query: 144 PYRNPYQRPNHDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMIGDFVHTRVFGNSDN 203
           P  + +Q   + P  F   E        +LA      F +PV+GM GD V+TR+FG   N
Sbjct: 157 PSFHNHQ---YSPRGFTTTES------TDLANAVMMSFLYPVIGMFGDLVYTRIFGTFTN 216

Query: 204 LYSYRNSYQLTGSSRNRMRRQEMQVDKSLNRISIFLFCCVILCVLVF 242
             +    YQ          ++ MQ +KSLNR+SIF  CC+ILC+L+F
Sbjct: 217 --TIAQPYQ---------SQRMMQREKSLNRVSIFFLCCIILCLLLF 243

[Close]

BLAST of HG10016082 vs. TAIR 10
Match: AT4G03510.1 (RING membrane-anchor 1 )

HSP 1 Score: 164.1 bits (414), Expect = 1.4e-40
Identity = 88/216 (40.74%), Postives = 126/216 (58.33%), Query Frame = 0


Query: 29  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHIQSASLA--IDERPQCPVCKADISHTTM 88
           FDCNICLD   EPVVTLCGHL+CWPCI+KWL +QS S +       QCPVCK+ +SH+T+
Sbjct: 46  FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHSTL 105

Query: 89  VPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACGNQMLATSSTHQQQLPYRNPYQRPNHD 148
           VPLYGRG+   + E +       +    R     +   +T     Q++ + +P +     
Sbjct: 106 VPLYGRGRCTTQEEGKNSVPKRPVGPVYRLEMPNSPYASTDLRLSQRVHFNSPQE----- 165

Query: 149 PFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMIGDFVHTRVFGNS-DNLYSYRNSYQLT 208
               G Y     + +++    S+S    PV+ M+G+ V TR+FG    + ++Y ++Y L 
Sbjct: 166 ----GYY---PVSGVMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLA 225

Query: 209 GSSRNRMRRQEMQVDKSLNRISIFLFCCVILCVLVF 242
           G+S  RMRR+ MQ DKSL RI  F  CCV+LC+L+F
Sbjct: 226 GTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

[Close]

BLAST of HG10016082 vs. TAIR 10
Match: AT4G03510.2 (RING membrane-anchor 1 )

HSP 1 Score: 164.1 bits (414), Expect = 1.4e-40
Identity = 88/216 (40.74%), Postives = 126/216 (58.33%), Query Frame = 0


Query: 29  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHIQSASLA--IDERPQCPVCKADISHTTM 88
           FDCNICLD   EPVVTLCGHL+CWPCI+KWL +QS S +       QCPVCK+ +SH+T+
Sbjct: 46  FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHSTL 105

Query: 89  VPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACGNQMLATSSTHQQQLPYRNPYQRPNHD 148
           VPLYGRG+   + E +       +    R     +   +T     Q++ + +P +     
Sbjct: 106 VPLYGRGRCTTQEEGKNSVPKRPVGPVYRLEMPNSPYASTDLRLSQRVHFNSPQE----- 165

Query: 149 PFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMIGDFVHTRVFGNS-DNLYSYRNSYQLT 208
               G Y     + +++    S+S    PV+ M+G+ V TR+FG    + ++Y ++Y L 
Sbjct: 166 ----GYY---PVSGVMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLA 225

Query: 209 GSSRNRMRRQEMQVDKSLNRISIFLFCCVILCVLVF 242
           G+S  RMRR+ MQ DKSL RI  F  CCV+LC+L+F
Sbjct: 226 GTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

[Close]

BLAST of HG10016082 vs. TAIR 10
Match: AT4G28270.1 (RING membrane-anchor 2 )

HSP 1 Score: 128.3 bits (321), Expect = 8.6e-30
Identity = 77/223 (34.53%), Postives = 113/223 (50.67%), Query Frame = 0


Query: 27  GCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHIQSAS-LAID------ERPQCPVCKA 86
           G FDCNICLD   +PVVTLCGHL+CWPCI+KW +  + S   +D      E P+CPVCK+
Sbjct: 17  GDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKS 76

Query: 87  DISHTTMVPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACGNQMLATSSTHQQQLPYRNP 146
           D+S  T+VP+YGRGQ         KA     N+P RP+     +        +    R  
Sbjct: 77  DVSEATLVPIYGRGQ---------KAPQSGSNVPSRPTGPVYDLRGVGQRLGEGESQRYM 136

Query: 147 YQRPNHDPFLFGNYEEDSAAPLLNLARTSFSGFHHPVVGMIGDFVHTRVFG-NSDNLYSY 206
           Y+ P+                              PV+G++ + V+ R+FG +S N+  Y
Sbjct: 137 YRMPD------------------------------PVMGVVCEMVYRRLFGESSSNMAPY 193

Query: 207 RNSYQLTGSSRNRMRRQEMQVDKSLNRISIFLFCCVILCVLVF 242
           R+          R RR+ MQ ++SL+R+ +FL C + +C+ +F
Sbjct: 197 RD-------MNVRSRRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

[Close]

BLAST of HG10016082 vs. TAIR 10
Match: AT1G19310.1 (RING/U-box superfamily protein )

HSP 1 Score: 110.2 bits (274), Expect = 2.4e-24
Identity = 49/101 (48.51%), Postives = 66/101 (65.35%), Query Frame = 0


Query: 17  TGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHIQSASLAIDERPQCPV 76
           +G     N    F+CNICLD A +P+VTLCGHL+CWPC+YKWLH+ S S        CPV
Sbjct: 9   SGNDTNNNDSSNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHSQS------KDCPV 68

Query: 77  CKADISHTTMVPLYGRGQTAEEVEPEAKAMHHDINIPPRPS 118
           CKA I    +VPLYGRG+++   +P +K++   + +P RPS
Sbjct: 69  CKAVIEEDRLVPLYGRGKSS--ADPRSKSI-PGLEVPNRPS 100

The following BLAST results are available for this feature:

BLAST of HG10016082 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881993.1	2.0e-137	95.85	E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida] >XP_038881994.1 E3 u...	[more]
XP_004134707.1	4.3e-132	93.36	E3 ubiquitin-protein ligase RMA1H1 isoform X2 [Cucumis sativus] >XP_031743484.1 ...	[more]
XP_004134706.1	4.3e-132	93.36	E3 ubiquitin-protein ligase RMA1H1 isoform X1 [Cucumis sativus] >XP_031743482.1 ...	[more]
XP_008439861.1	2.6e-129	92.12	PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Cucumis melo] >KAA0052689.1 ...	[more]
XP_023003183.1	4.3e-124	87.19	E3 ubiquitin-protein ligase RMA1H1-like isoform X1 [Cucurbita maxima] >XP_023003...	[more]

BLAST of HG10016082 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6R567	8.0e-49	46.93	E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=...	[more]
Q8GUK7	6.0e-44	44.49	E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV...	[more]
O64425	2.0e-39	40.74	E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV...	[more]
P93030	1.2e-28	34.53	E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV...	[more]
Q5ZIR9	2.7e-20	45.10	E3 ubiquitin-protein ligase RNF185 OS=Gallus gallus OX=9031 GN=RNF185 PE=2 SV=1	[more]

BLAST of HG10016082 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK60	2.1e-132	93.36	Rnf5 OS=Cucumis sativus OX=3659 GN=Csa_6G517320 PE=4 SV=1	[more]
A0A5A7UGP7	1.3e-129	92.12	E3 ubiquitin-protein ligase RMA1H1-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3AZB8	1.3e-129	92.12	E3 ubiquitin-protein ligase RMA1H1-like OS=Cucumis melo OX=3656 GN=LOC103484523 ...	[more]
A0A6J1KVR4	2.1e-124	87.19	E3 ubiquitin-protein ligase RMA1H1-like isoform X1 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1EI23	1.1e-122	86.36	E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of HG10016082 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27470.1	4.2e-45	44.49	RING membrane-anchor 3	[more]
AT4G03510.1	1.4e-40	40.74	RING membrane-anchor 1	[more]
AT4G03510.2	1.4e-40	40.74	RING membrane-anchor 1	[more]
AT4G28270.1	8.6e-30	34.53	RING membrane-anchor 2	[more]
AT1G19310.1	2.4e-24	48.51	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 31..77 e-value: 6.5E-9 score: 45.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 31..78 score: 12.504031
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 31..77 e-value: 4.0E-8 score: 33.0
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 18..91 e-value: 9.0E-17 score: 62.2
IPR045103	E3 ubiquitin-protein ligase RNF5/RNF185-like	PANTHER	PTHR12313	E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED	coord: 2..241
None	No IPR available	PANTHER	PTHR12313:SF6	E3 UBIQUITIN-PROTEIN LIGASE RMA3	coord: 2..241
None	No IPR available	CDD	cd16745	RING-HC_AtRMA_like	coord: 29..79 e-value: 2.8809E-25 score: 91.9819
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 25..92
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 46..55

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10016082.1	HG10016082.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071712	ER-associated misfolded protein catabolic process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0044390	ubiquitin-like protein conjugating enzyme binding
molecular_function	GO:0061630	ubiquitin protein ligase activity