HG10015519 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTGCAATGGGTGTCGGATTCTTCGTAAAGGATGTAGCGATGACTGTATAATTAGACCTTGTCTTCAATGGATACCCTCCGCCGATTCTCAAGCCAACGCCACCATTTTTCTCGCCAAATTTTACGGCCGCGCCGGCCTCTTCAACCTCATTACCGCCGCCGCCCAACACCTCCGCCCTGGTTAATTCTCTTTTTTCTTTTACCCTTTTTTGTCTTTTTCCATTTTCCTCCCTATTTCATTCATCTATCTTAATTCCATTTTTTTTTTAATCTTTTTCACCACTGATTTTATATAATATAACCCACTAGTAACTAGTAAGTCACAACGAGATTAATTCGAGGACTCTCAGACTCCTTGTGAATTTAAAAAATTATATAAATTTAATTTTTTTATATATACACTTTAATTTGTCCTTTAAATTTTTTTTAAACTCATAAGATTCTCAGTTGGACAACATGCTGGTGGTGGGATTACTTTTATTTAGTTTTTATTTTTTAATTAGAGTATACTATCTTAACGATTATACATATAACAAAGATTTAAAAAATATAAAATTTTGGGGACGTTGGGTTTTATTTTATTTTATTTTAAAGCAGATTGAAAGTTATACAAATTGATAATGTTGATATGGTCTATGGAAAACAAACTATTTCTTTGTTAAAATAGTGATATGATTAAATTTATTATACTTAAATTTTTAGATTGTTGAATTGATTTATCTTATAAAAACATTTGAAACTCTTTAATTACCCATTAATTCAAAAGCTTAAGTTGAGGTAAATTTAATTATATCAACACATCATAATCAATCTCTCTATTTTTTAGCTTGAAATTTGTAGAAATCAATATAAAAAAATGACATTACAAAAGTCTAGCTTTGATACCATGTTAATGAGTTACTGTAAATTTAATGGTATCAACACTTTAACACCCTTCATGCTATTTTTTCCCCTTTTTTTTAGTAAGACACAACAAATAAATGACATCATCTATTTCATTCTTTAATTACTATTAATCAATAGTTTGTAGGATTATTATAATAATACATTTGTTTTAAGATTTTTAATTTAAATGACGATTTAGCGAAAATGAGAAACAAAAGAAAAGTGTGAGATGTATTTATTTGAGGTGTGTGGTGTCATATGGTTGATGACATTGAAGTTTGTCTTCTTGTTGTTGTGTTTTTTATTTTTAGCCATTTTCAAGTCGTTGCTGTACGAGGCGTGCGGTCGGATGGTGAATCCCGTGTACGGTTCTGTCGGATTACTCTGCTCCGGCGACTGGGAACGGTGTCAGGCCGCCGTCGACGCTGTGTTGAGCGGATCCATGAACGTCGAACCCGAAGCGCCGCCGTCAAACAACGCTAACCTTTCCCTCAAATGCTGCGACATTCGCCATGTTTGTAACGACCCCAATTTGGCTGCTTCCGGCGAGCTTCTCAAGGTCAAGGCTCGAAGCCGGTTCAAGAAGCCCGACCATCGAACCAAACCAAAACCCGGACCGGTTCCTGATTTAAGAATCGGACCTAGTTTTGAAGAAGCGGGTCGGGTTTTGAGAAATGGAAGCCGGTTTGAGAAGGGGGACGTTGAGCTGGAATTGACTCTTAAATCGGCTCAGTAA ATGAGTTGCAATGGGTGTCGGATTCTTCGTAAAGGATGTAGCGATGACTGTATAATTAGACCTTGTCTTCAATGGATACCCTCCGCCGATTCTCAAGCCAACGCCACCATTTTTCTCGCCAAATTTTACGGCCGCGCCGGCCTCTTCAACCTCATTACCGCCGCCGCCCAACACCTCCGCCCTGCCATTTTCAAGTCGTTGCTGTACGAGGCGTGCGGTCGGATGGTGAATCCCGTGTACGGTTCTGTCGGATTACTCTGCTCCGGCGACTGGGAACGGTGTCAGGCCGCCGTCGACGCTGTGTTGAGCGGATCCATGAACGTCGAACCCGAAGCGCCGCCGTCAAACAACGCTAACCTTTCCCTCAAATGCTGCGACATTCGCCATGTTTGTAACGACCCCAATTTGGCTGCTTCCGGCGAGCTTCTCAAGGTCAAGGCTCGAAGCCGGTTCAAGAAGCCCGACCATCGAACCAAACCAAAACCCGGACCGGTTCCTGATTTAAGAATCGGACCTAGTTTTGAAGAAGCGGGTCGGGTTTTGAGAAATGGAAGCCGGTTTGAGAAGGGGGACGTTGAGCTGGAATTGACTCTTAAATCGGCTCAGTAA ATGAGTTGCAATGGGTGTCGGATTCTTCGTAAAGGATGTAGCGATGACTGTATAATTAGACCTTGTCTTCAATGGATACCCTCCGCCGATTCTCAAGCCAACGCCACCATTTTTCTCGCCAAATTTTACGGCCGCGCCGGCCTCTTCAACCTCATTACCGCCGCCGCCCAACACCTCCGCCCTGCCATTTTCAAGTCGTTGCTGTACGAGGCGTGCGGTCGGATGGTGAATCCCGTGTACGGTTCTGTCGGATTACTCTGCTCCGGCGACTGGGAACGGTGTCAGGCCGCCGTCGACGCTGTGTTGAGCGGATCCATGAACGTCGAACCCGAAGCGCCGCCGTCAAACAACGCTAACCTTTCCCTCAAATGCTGCGACATTCGCCATGTTTGTAACGACCCCAATTTGGCTGCTTCCGGCGAGCTTCTCAAGGTCAAGGCTCGAAGCCGGTTCAAGAAGCCCGACCATCGAACCAAACCAAAACCCGGACCGGTTCCTGATTTAAGAATCGGACCTAGTTTTGAAGAAGCGGGTCGGGTTTTGAGAAATGGAAGCCGGTTTGAGAAGGGGGACGTTGAGCTGGAATTGACTCTTAAATCGGCTCAGTAA MSCNGCRILRKGCSDDCIIRPCLQWIPSADSQANATIFLAKFYGRAGLFNLITAAAQHLRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLSGSMNVEPEAPPSNNANLSLKCCDIRHVCNDPNLAASGELLKVKARSRFKKPDHRTKPKPGPVPDLRIGPSFEEAGRVLRNGSRFEKGDVELELTLKSAQ Homology
BLAST of HG10015519 vs. NCBI nr
Match: XP_004135401.1 (LOB domain-containing protein 40 [Cucumis sativus] >KGN52610.2 hypothetical protein Csa_008453 [Cucumis sativus]) HSP 1 Score: 381.7 bits (979), Expect = 3.9e-102 Identity = 185/203 (91.13%), Postives = 192/203 (94.58%), Query Frame = 0
BLAST of HG10015519 vs. NCBI nr
Match: KAA0034556.1 (LOB domain-containing protein 40-like [Cucumis melo var. makuwa]) HSP 1 Score: 367.5 bits (942), Expect = 7.6e-98 Identity = 180/212 (84.91%), Postives = 189/212 (89.15%), Query Frame = 0
BLAST of HG10015519 vs. NCBI nr
Match: XP_038893147.1 (LOB domain-containing protein 40-like [Benincasa hispida]) HSP 1 Score: 366.7 bits (940), Expect = 1.3e-97 Identity = 180/202 (89.11%), Postives = 188/202 (93.07%), Query Frame = 0
BLAST of HG10015519 vs. NCBI nr
Match: KAG6573961.1 (LOB domain-containing protein 42, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 320.9 bits (821), Expect = 8.1e-84 Identity = 166/220 (75.45%), Postives = 177/220 (80.45%), Query Frame = 0
BLAST of HG10015519 vs. NCBI nr
Match: XP_022945568.1 (LOB domain-containing protein 42-like [Cucurbita moschata]) HSP 1 Score: 320.9 bits (821), Expect = 8.1e-84 Identity = 166/220 (75.45%), Postives = 177/220 (80.45%), Query Frame = 0
BLAST of HG10015519 vs. ExPASy Swiss-Prot
Match: Q9ZW96 (LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 2.0e-48 Identity = 101/159 (63.52%), Postives = 115/159 (72.33%), Query Frame = 0
BLAST of HG10015519 vs. ExPASy Swiss-Prot
Match: Q9CA30 (LOB domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=LBD42 PE=1 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 3.7e-47 Identity = 100/165 (60.61%), Postives = 117/165 (70.91%), Query Frame = 0
BLAST of HG10015519 vs. ExPASy Swiss-Prot
Match: Q9M886 (LOB domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=LBD41 PE=2 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 3.5e-45 Identity = 88/140 (62.86%), Postives = 104/140 (74.29%), Query Frame = 0
BLAST of HG10015519 vs. ExPASy Swiss-Prot
Match: Q9FN11 (LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 9.1e-38 Identity = 70/112 (62.50%), Postives = 92/112 (82.14%), Query Frame = 0
BLAST of HG10015519 vs. ExPASy Swiss-Prot
Match: Q9SN23 (LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.0e-36 Identity = 70/112 (62.50%), Postives = 91/112 (81.25%), Query Frame = 0
BLAST of HG10015519 vs. ExPASy TrEMBL
Match: A0A0A0KUI0 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G609680 PE=3 SV=1) HSP 1 Score: 381.7 bits (979), Expect = 1.9e-102 Identity = 185/203 (91.13%), Postives = 192/203 (94.58%), Query Frame = 0
BLAST of HG10015519 vs. ExPASy TrEMBL
Match: A0A5A7SXG6 (LOB domain-containing protein 40-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G005720 PE=3 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 3.7e-98 Identity = 180/212 (84.91%), Postives = 189/212 (89.15%), Query Frame = 0
BLAST of HG10015519 vs. ExPASy TrEMBL
Match: A0A6J1G195 (LOB domain-containing protein 42-like OS=Cucurbita moschata OX=3662 GN=LOC111449763 PE=3 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 3.9e-84 Identity = 166/220 (75.45%), Postives = 177/220 (80.45%), Query Frame = 0
BLAST of HG10015519 vs. ExPASy TrEMBL
Match: A0A6J1HWX5 (LOB domain-containing protein 42-like OS=Cucurbita maxima OX=3661 GN=LOC111467594 PE=3 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 1.5e-83 Identity = 164/218 (75.23%), Postives = 175/218 (80.28%), Query Frame = 0
BLAST of HG10015519 vs. ExPASy TrEMBL
Match: A0A6J1DAV9 (uncharacterized protein LOC111018633 OS=Momordica charantia OX=3673 GN=LOC111018633 PE=3 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 5.7e-75 Identity = 151/210 (71.90%), Postives = 165/210 (78.57%), Query Frame = 0
BLAST of HG10015519 vs. TAIR 10
Match: AT1G67100.1 (LOB domain-containing protein 40 ) HSP 1 Score: 193.7 bits (491), Expect = 1.4e-49 Identity = 101/159 (63.52%), Postives = 115/159 (72.33%), Query Frame = 0
BLAST of HG10015519 vs. TAIR 10
Match: AT1G68510.1 (LOB domain-containing protein 42 ) HSP 1 Score: 189.5 bits (480), Expect = 2.6e-48 Identity = 100/165 (60.61%), Postives = 117/165 (70.91%), Query Frame = 0
BLAST of HG10015519 vs. TAIR 10
Match: AT3G02550.1 (LOB domain-containing protein 41 ) HSP 1 Score: 183.0 bits (463), Expect = 2.5e-46 Identity = 88/140 (62.86%), Postives = 104/140 (74.29%), Query Frame = 0
BLAST of HG10015519 vs. TAIR 10
Match: AT5G67420.1 (LOB domain-containing protein 37 ) HSP 1 Score: 158.3 bits (399), Expect = 6.5e-39 Identity = 70/112 (62.50%), Postives = 92/112 (82.14%), Query Frame = 0
BLAST of HG10015519 vs. TAIR 10
Match: AT3G49940.1 (LOB domain-containing protein 38 ) HSP 1 Score: 154.8 bits (390), Expect = 7.2e-38 Identity = 70/112 (62.50%), Postives = 91/112 (81.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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