HG10014880 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10014880
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	LOB domain-containing protein
Location	Chr02: 21288898 .. 21289790 (-)
RNA-Seq Expression	HG10014880
Synteny	HG10014880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGGCCTTAACTCTTCTTCTTCTTCTTCTTCTTGTGGTGCCTGCAAGTTTCTTAGGAGAAAATGTAGTGATCAATGTGTTTTTGCTCCTTTCTTTAGCTATGATGAAGCCACTTCCCATTTTGCAGCTGTTCATAAAGTCTTTGGTGCTAGTAATGTCTCCAAGCTTCTTTTACATCTCCCCATGTATATCCGAAGCCACGCCGCCATTACTATCGCTTATGAAGCTCTCGAGCGCATGCGAGATCCTACTTATGGTTGCGTTGCGCATATCTTCGCATTACAGCAAGAGGTTGTTATGAAAACCTTAAAAACTTAAGCAGATGGATTACAGTAAATTTACGTGTGACCTTTTTATTCATATAAGGGTATAACAAAACCCTAAAAATTGAAACACATGGGTTACGATTTATTCATATTCCAATTTGAATAACCATGATATTTTATAATTCAATACTATCACAAACAGAGACTATTAAATTCAAAAGTTTAAGTTACGTTATTAAATCTCTCTTGCAGGTCGTGAGCTTGCAGGAGGAGATAGAAGTATTGGGGAGCCAAATAGCAAACTTCGCCGCTACCGGTGGGAGCGTTGTGGAGGTTGAGAATCCATTTATAGATCAACTTCAAGTCTCACAGCAGCTGAATGATTTTGGGATGATGAACACAAATGATTATCAAAATGAGCTGCTTTCTGAGTTGCCCTACCAAAGTTTTGATAATGTCCAAAATGATAATAATAATGGTCAAATGATGTCTCCATTGTTTTGTTTAGGGGAAGAAGATCATGGGGTTTTTGGGTTTTGCAACTCAAATAATTTTGTTGAGAGATCAGCCTTTGATGTTTCAGTTGAGGAGAATTTTGTTGGTTATCCATGGGTAGTTGGATGA

mRNA sequence

ATGACAGGCCTTAACTCTTCTTCTTCTTCTTCTTCTTGTGGTGCCTGCAAGTTTCTTAGGAGAAAATGTAGTGATCAATGTGTTTTTGCTCCTTTCTTTAGCTATGATGAAGCCACTTCCCATTTTGCAGCTGTTCATAAAGTCTTTGGTGCTAGTAATGTCTCCAAGCTTCTTTTACATCTCCCCATGTATATCCGAAGCCACGCCGCCATTACTATCGCTTATGAAGCTCTCGAGCGCATGCGAGATCCTACTTATGGTTGCGTTGCGCATATCTTCGCATTACAGCAAGAGGTCGTGAGCTTGCAGGAGGAGATAGAAGTATTGGGGAGCCAAATAGCAAACTTCGCCGCTACCGGTGGGAGCGTTGTGGAGGTTGAGAATCCATTTATAGATCAACTTCAAGTCTCACAGCAGCTGAATGATTTTGGGATGATGAACACAAATGATTATCAAAATGAGCTGCTTTCTGAGTTGCCCTACCAAAGTTTTGATAATGTCCAAAATGATAATAATAATGGTCAAATGATGTCTCCATTGTTTTGTTTAGGGGAAGAAGATCATGGGGTTTTTGGGTTTTGCAACTCAAATAATTTTGTTGAGAGATCAGCCTTTGATGTTTCAGTTGAGGAGAATTTTGTTGGTTATCCATGGGTAGTTGGATGA

Coding sequence (CDS)

ATGACAGGCCTTAACTCTTCTTCTTCTTCTTCTTCTTGTGGTGCCTGCAAGTTTCTTAGGAGAAAATGTAGTGATCAATGTGTTTTTGCTCCTTTCTTTAGCTATGATGAAGCCACTTCCCATTTTGCAGCTGTTCATAAAGTCTTTGGTGCTAGTAATGTCTCCAAGCTTCTTTTACATCTCCCCATGTATATCCGAAGCCACGCCGCCATTACTATCGCTTATGAAGCTCTCGAGCGCATGCGAGATCCTACTTATGGTTGCGTTGCGCATATCTTCGCATTACAGCAAGAGGTCGTGAGCTTGCAGGAGGAGATAGAAGTATTGGGGAGCCAAATAGCAAACTTCGCCGCTACCGGTGGGAGCGTTGTGGAGGTTGAGAATCCATTTATAGATCAACTTCAAGTCTCACAGCAGCTGAATGATTTTGGGATGATGAACACAAATGATTATCAAAATGAGCTGCTTTCTGAGTTGCCCTACCAAAGTTTTGATAATGTCCAAAATGATAATAATAATGGTCAAATGATGTCTCCATTGTTTTGTTTAGGGGAAGAAGATCATGGGGTTTTTGGGTTTTGCAACTCAAATAATTTTGTTGAGAGATCAGCCTTTGATGTTTCAGTTGAGGAGAATTTTGTTGGTTATCCATGGGTAGTTGGATGA

Protein sequence

MTGLNSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPMYIRSHAAITIAYEALERMRDPTYGCVAHIFALQQEVVSLQEEIEVLGSQIANFAATGGSVVEVENPFIDQLQVSQQLNDFGMMNTNDYQNELLSELPYQSFDNVQNDNNNGQMMSPLFCLGEEDHGVFGFCNSNNFVERSAFDVSVEENFVGYPWVVG

Homology

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BLAST of HG10014880 vs. NCBI nr
Match: XP_038889414.1 (LOB domain-containing protein 33-like [Benincasa hispida])

HSP 1 Score: 397.9 bits (1021), Expect = 5.7e-107
Identity = 201/225 (89.33%), Postives = 211/225 (93.78%), Query Frame = 0


Query: 1   MTGLN----SSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSK 60
           MTGLN    SSSSSSSCGACKFLRRKCSDQCVFAPFFSY+EATSHFAAVHKVFGASNVSK
Sbjct: 1   MTGLNSSISSSSSSSSCGACKFLRRKCSDQCVFAPFFSYEEATSHFAAVHKVFGASNVSK 60

Query: 61  LLLHLPMYIRSHAAITIAYEALERMRDPTYGCVAHIFALQQEVVSLQEEIEVLGSQIANF 120
           LLLHLP++IRSHAA+T+AYEALERMRDPTYGCVAHIFALQQEV SLQEEIE+LGSQIANF
Sbjct: 61  LLLHLPVHIRSHAAVTVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANF 120

Query: 121 AATGGSVVEVENPFIDQLQVSQQLNDFGMMNTNDYQNELLSELPYQSFDNVQNDNNNGQM 180
           AA GGS+  VENP IDQLQVSQQLNDFG+MNTNDYQNELLSELPYQSFDNVQND  NGQM
Sbjct: 121 AAAGGSIAAVENPLIDQLQVSQQLNDFGVMNTNDYQNELLSELPYQSFDNVQND--NGQM 180

Query: 181 MSPLFCLGEEDHGVFGFCNSNNFVERSAFDVSVEENFVGYPWVVG 222
           +SPLFCLGEED GV GFCNSNN VERSAFDVSVEENF+GYPWVVG
Sbjct: 181 ISPLFCLGEED-GVLGFCNSNNVVERSAFDVSVEENFIGYPWVVG 222

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BLAST of HG10014880 vs. NCBI nr
Match: XP_004147712.1 (LOB domain-containing protein 33 [Cucumis sativus] >KGN50569.1 hypothetical protein Csa_021431 [Cucumis sativus])

HSP 1 Score: 384.4 bits (986), Expect = 6.5e-103
Identity = 190/221 (85.97%), Postives = 204/221 (92.31%), Query Frame = 0


Query: 1   MTGLNSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH 60
           MTGLNSS+SS+SCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH
Sbjct: 1   MTGLNSSNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH 60

Query: 61  LPMYIRSHAAITIAYEALERMRDPTYGCVAHIFALQQEVVSLQEEIEVLGSQIANFAATG 120
           LP +IRSHAAIT+AYEALERMRDPTYGCVAHIFALQQEV SLQEEIE+LGSQIANFA TG
Sbjct: 61  LPTHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFATTG 120

Query: 121 GSVVEVENPFIDQLQVSQQLNDFGMMNTNDYQNELLSELPYQSFDNVQNDNNNGQMMSPL 180
           GS+  V+NPFIDQ+QV QQ++ FGMMNTN YQNEL+SELPYQSFDNVQNDN   QM+SPL
Sbjct: 121 GSIAAVDNPFIDQVQVPQQMDGFGMMNTNYYQNELVSELPYQSFDNVQNDNTTAQMISPL 180

Query: 181 FCLGEEDHGVFGFCNSNNFVERSAFDVSVEENFVGYPWVVG 222
           FCLGEED GVF F NSNN VE SAFDVSVEEN +GYPW+VG
Sbjct: 181 FCLGEED-GVFEFSNSNNVVESSAFDVSVEENCIGYPWIVG 220

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BLAST of HG10014880 vs. NCBI nr
Match: XP_008461694.1 (PREDICTED: LOB domain-containing protein 33-like [Cucumis melo])

HSP 1 Score: 368.2 bits (944), Expect = 4.9e-98
Identity = 189/223 (84.75%), Postives = 202/223 (90.58%), Query Frame = 0


Query: 1   MTGLNSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH 60
           MTGLNSS++SSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH
Sbjct: 1   MTGLNSSTTSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH 60

Query: 61  LPMYIRSHAAITIAYEALERMRDPTYGCVAHIFALQQEVVSLQEEIEVLGSQIANFAATG 120
           LP + RSHAAIT+AYEALERMRDPTYGC+AHIFALQQEVVSLQEEIE+LGSQIAN A TG
Sbjct: 61  LPTHTRSHAAITVAYEALERMRDPTYGCIAHIFALQQEVVSLQEEIEILGSQIANLATTG 120

Query: 121 GSVVEVENPFIDQ-LQVSQQLNDFGMMNTNDYQNELLSELPYQSFDNVQNDNNNGQMMSP 180
           GS+  VENPFIDQ +QVSQQ++ F M NTN YQNEL SELPYQSFDN+QND N  QM+SP
Sbjct: 121 GSIAAVENPFIDQVVQVSQQMDGFEMTNTNYYQNELASELPYQSFDNIQND-NTAQMISP 180

Query: 181 LFCLGEEDHGVFGFCNSNNFVE-RSAFDVSVEENFVGYPWVVG 222
           LFCLGEED GVF FCNSNN VE  SAFDVSVEEN VGYPW+VG
Sbjct: 181 LFCLGEED-GVFEFCNSNNVVESTSAFDVSVEENCVGYPWIVG 221

[Close]

BLAST of HG10014880 vs. NCBI nr
Match: XP_023542245.1 (LOB domain-containing protein 33-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310.8 bits (795), Expect = 9.2e-81
Identity = 170/221 (76.92%), Postives = 191/221 (86.43%), Query Frame = 0


Query: 1   MTGL---NSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKL 60
           MTGL   +SSSSSSSCGACKFLRRKCS+ CVFAPFF+YDEATSHFAAVHKVFGASNVSKL
Sbjct: 1   MTGLTSSSSSSSSSSCGACKFLRRKCSNHCVFAPFFTYDEATSHFAAVHKVFGASNVSKL 60

Query: 61  LLHLPMYIRSHAAITIAYEALERMRDPTYGCVAHIFALQQEVVSLQEEIEVLGSQIANFA 120
           LLHLPM+IRSHAAIT+AYEALERMRDPTYGCVAHIFALQQE+VSLQEEI++LGSQIANF 
Sbjct: 61  LLHLPMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEIVSLQEEIDMLGSQIANFT 120

Query: 121 ATGGSVVEVENPFIDQLQVSQQLNDFGMMNTNDYQNELLSELPYQSFDNVQNDNNNGQMM 180
           A   +V  VENP I +LQVS+QLND  +MNTNDYQNELLS+LP  +FD V  + N+ QM+
Sbjct: 121 ADMDNVAVVENPCI-ELQVSKQLNDL-VMNTNDYQNELLSQLP--TFDEV--ETNDAQMI 180

Query: 181 SPLFCLGEEDHGVFGFCNSNNFVERSAFDVSVEENFVGYPW 219
           SPLFC+GEE+ G FG CN NN +E SAFDVSV+ENF  Y W
Sbjct: 181 SPLFCIGEEE-GFFG-CNPNNAMENSAFDVSVDENF-AYLW 212

[Close]

BLAST of HG10014880 vs. NCBI nr
Match: XP_022941701.1 (LOB domain-containing protein 33-like [Cucurbita moschata])

HSP 1 Score: 308.9 bits (790), Expect = 3.5e-80
Identity = 166/218 (76.15%), Postives = 189/218 (86.70%), Query Frame = 0


Query: 1   MTGLNSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH 60
           +T  +SSSSSSSCGACKFLRRKCS+ CVFAPFF+YDEATSHFAAVHKVFGASNVSKLLLH
Sbjct: 4   LTSYSSSSSSSSCGACKFLRRKCSNHCVFAPFFTYDEATSHFAAVHKVFGASNVSKLLLH 63

Query: 61  LPMYIRSHAAITIAYEALERMRDPTYGCVAHIFALQQEVVSLQEEIEVLGSQIANFAATG 120
           LPM+IRSHAAIT+AYEALERMRDPTYGCVAHIFALQQE++SLQEEI++LGSQIANF A  
Sbjct: 64  LPMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEIMSLQEEIDMLGSQIANFTADM 123

Query: 121 GSVVEVENPFIDQLQVSQQLNDFGMMNTNDYQNELLSELPYQSFDNVQNDNNNGQMMSPL 180
            +V  VENP I +LQVS+QLND  +MNTNDYQNELLS+LP  +FD V  + N+ QM+SPL
Sbjct: 124 DNVAVVENPCI-ELQVSKQLNDL-VMNTNDYQNELLSQLP--NFDQV--EINDAQMISPL 183

Query: 181 FCLGEEDHGVFGFCNSNNFVERSAFDVSVEENFVGYPW 219
           FC+GEED G FG CN NN +E SAFDV+V+E F GY W
Sbjct: 184 FCIGEED-GFFG-CNPNNAMENSAFDVAVDETF-GYLW 212

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BLAST of HG10014880 vs. ExPASy Swiss-Prot
Match: Q9LHS8 (LOB domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=LBD33 PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.0e-42
Identity = 91/150 (60.67%), Postives = 116/150 (77.33%), Query Frame = 0


Query: 7   SSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPMYIR 66
           +S  SSCGACKFLRRKC+  CVF+P+FSY++A+SHFAAVHKVFGASNVSK LLHLP + R
Sbjct: 2   ASHGSSCGACKFLRRKCNRDCVFSPYFSYEQASSHFAAVHKVFGASNVSKHLLHLPQHQR 61

Query: 67  SHAAITIAYEALERMRDPTYGCVAHIFALQQEVVSLQEEIEVLGSQIANFAATGGSVVEV 126
           + AAITI+YEAL RMRDP YGCVAHIFAL Q+VV+LQEEIE LGSQ+ NF+ +  +  ++
Sbjct: 62  NIAAITISYEALSRMRDPVYGCVAHIFALHQQVVTLQEEIEFLGSQMKNFSYSNQNGSQL 121

Query: 127 EN--PFIDQL-QVSQQLNDFGMMNTNDYQN 154
            N   F++Q+   +    D  ++N  D +N
Sbjct: 122 NNIPEFVNQMTMATTNFVDESVLNNADGRN 151

[Close]

BLAST of HG10014880 vs. ExPASy Swiss-Prot
Match: Q9M2J7 (LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.2e-36
Identity = 78/125 (62.40%), Postives = 94/125 (75.20%), Query Frame = 0


Query: 5   NSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPMY 64
           +SSSS S CGACKFLRRKC+  CVFAP+F +++  SHFAA+HKVFGASN SKLL HLP+ 
Sbjct: 4   SSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPIS 63

Query: 65  IRSHAAITIAYEALERMRDPTYGCVAHIFALQQEVVSLQEEIEVLGSQIANFAATGGSVV 124
            R  AAITI+YEA  R++DP YGCV+HIFALQQ+VV+LQ E+E+L  Q A       S  
Sbjct: 64  DRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADSPT 123

Query: 125 EVENP 130
             ENP
Sbjct: 124 S-ENP 127

[Close]

BLAST of HG10014880 vs. ExPASy Swiss-Prot
Match: O22131 (LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 SV=2)

HSP 1 Score: 144.4 bits (363), Expect = 1.5e-33
Identity = 68/113 (60.18%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 3   GLNSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLP 62
           G +       CGACKFLRRKC   C+FAP+F  ++ +++FAAVHKVFGASNVSKLLLH+P
Sbjct: 28  GSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHIP 87

Query: 63  MYIRSHAAITIAYEALERMRDPTYGCVAHIFALQQEVVSLQEEIEVLGSQIAN 116
           ++ RS A +TI YEA  R+RDP YGCVAHIFALQQ+VV+LQ E+  L + +A+
Sbjct: 88  VHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLAS 140

[Close]

BLAST of HG10014880 vs. ExPASy Swiss-Prot
Match: Q5UG13 (LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL1 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.3e-32
Identity = 67/104 (64.42%), Postives = 83/104 (79.81%), Query Frame = 0


Query: 11  SSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPMYIRSHAA 70
           S CGACKFLRRKC   CVFAP+F +++  +HFAA+HKVFGASNVSKLL HLP+  R  AA
Sbjct: 6   SPCGACKFLRRKCVRGCVFAPYFCHEQGAAHFAAIHKVFGASNVSKLLAHLPLADRPEAA 65

Query: 71  ITIAYEALERMRDPTYGCVAHIFALQQEVVSLQEEIEVLGSQIA 115
           +TI+YEA  R+RDP YGCVAHIFALQQ+V++LQ ++  L +  A
Sbjct: 66  VTISYEAQARLRDPIYGCVAHIFALQQQVMTLQAQLASLKAAAA 109

[Close]

BLAST of HG10014880 vs. ExPASy Swiss-Prot
Match: Q9SLB7 (LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.2e-32
Identity = 67/134 (50.00%), Postives = 93/134 (69.40%), Query Frame = 0


Query: 6   SSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPMYI 65
           ++ + S CGACKFLRRKC+  C+FAP+FS ++  + FAA+HKVFGASNVSKLLL++P++ 
Sbjct: 9   TAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNVPIHD 68

Query: 66  RSHAAITIAYEALERMRDPTYGCVAHIFALQQEVVSLQEEIEVLGSQIANFAATGGSVVE 125
           R  A +TIAYEA  R+ DP YGCV+HIFALQQ+V  LQ ++  + +QIA    +    + 
Sbjct: 69  RCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAAGDLR 128

Query: 126 VENPFIDQLQVSQQ 140
             +   +Q    QQ
Sbjct: 129 HSSESTNQFMTWQQ 142

[Close]

BLAST of HG10014880 vs. ExPASy TrEMBL
Match: A0A0A0KNX8 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G182740 PE=3 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.2e-103
Identity = 190/221 (85.97%), Postives = 204/221 (92.31%), Query Frame = 0


Query: 1   MTGLNSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH 60
           MTGLNSS+SS+SCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH
Sbjct: 1   MTGLNSSNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH 60

Query: 61  LPMYIRSHAAITIAYEALERMRDPTYGCVAHIFALQQEVVSLQEEIEVLGSQIANFAATG 120
           LP +IRSHAAIT+AYEALERMRDPTYGCVAHIFALQQEV SLQEEIE+LGSQIANFA TG
Sbjct: 61  LPTHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFATTG 120

Query: 121 GSVVEVENPFIDQLQVSQQLNDFGMMNTNDYQNELLSELPYQSFDNVQNDNNNGQMMSPL 180
           GS+  V+NPFIDQ+QV QQ++ FGMMNTN YQNEL+SELPYQSFDNVQNDN   QM+SPL
Sbjct: 121 GSIAAVDNPFIDQVQVPQQMDGFGMMNTNYYQNELVSELPYQSFDNVQNDNTTAQMISPL 180

Query: 181 FCLGEEDHGVFGFCNSNNFVERSAFDVSVEENFVGYPWVVG 222
           FCLGEED GVF F NSNN VE SAFDVSVEEN +GYPW+VG
Sbjct: 181 FCLGEED-GVFEFSNSNNVVESSAFDVSVEENCIGYPWIVG 220

[Close]

BLAST of HG10014880 vs. ExPASy TrEMBL
Match: A0A1S3CGM1 (LOB domain-containing protein 33-like OS=Cucumis melo OX=3656 GN=LOC103500235 PE=3 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.3e-98
Identity = 189/223 (84.75%), Postives = 202/223 (90.58%), Query Frame = 0


Query: 1   MTGLNSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH 60
           MTGLNSS++SSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH
Sbjct: 1   MTGLNSSTTSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH 60

Query: 61  LPMYIRSHAAITIAYEALERMRDPTYGCVAHIFALQQEVVSLQEEIEVLGSQIANFAATG 120
           LP + RSHAAIT+AYEALERMRDPTYGC+AHIFALQQEVVSLQEEIE+LGSQIAN A TG
Sbjct: 61  LPTHTRSHAAITVAYEALERMRDPTYGCIAHIFALQQEVVSLQEEIEILGSQIANLATTG 120

Query: 121 GSVVEVENPFIDQ-LQVSQQLNDFGMMNTNDYQNELLSELPYQSFDNVQNDNNNGQMMSP 180
           GS+  VENPFIDQ +QVSQQ++ F M NTN YQNEL SELPYQSFDN+QND N  QM+SP
Sbjct: 121 GSIAAVENPFIDQVVQVSQQMDGFEMTNTNYYQNELASELPYQSFDNIQND-NTAQMISP 180

Query: 181 LFCLGEEDHGVFGFCNSNNFVE-RSAFDVSVEENFVGYPWVVG 222
           LFCLGEED GVF FCNSNN VE  SAFDVSVEEN VGYPW+VG
Sbjct: 181 LFCLGEED-GVFEFCNSNNVVESTSAFDVSVEENCVGYPWIVG 221

[Close]

BLAST of HG10014880 vs. ExPASy TrEMBL
Match: A0A6J1FLU4 (LOB domain-containing protein 33-like OS=Cucurbita moschata OX=3662 GN=LOC111446983 PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.7e-80
Identity = 166/218 (76.15%), Postives = 189/218 (86.70%), Query Frame = 0


Query: 1   MTGLNSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH 60
           +T  +SSSSSSSCGACKFLRRKCS+ CVFAPFF+YDEATSHFAAVHKVFGASNVSKLLLH
Sbjct: 4   LTSYSSSSSSSSCGACKFLRRKCSNHCVFAPFFTYDEATSHFAAVHKVFGASNVSKLLLH 63

Query: 61  LPMYIRSHAAITIAYEALERMRDPTYGCVAHIFALQQEVVSLQEEIEVLGSQIANFAATG 120
           LPM+IRSHAAIT+AYEALERMRDPTYGCVAHIFALQQE++SLQEEI++LGSQIANF A  
Sbjct: 64  LPMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEIMSLQEEIDMLGSQIANFTADM 123

Query: 121 GSVVEVENPFIDQLQVSQQLNDFGMMNTNDYQNELLSELPYQSFDNVQNDNNNGQMMSPL 180
            +V  VENP I +LQVS+QLND  +MNTNDYQNELLS+LP  +FD V  + N+ QM+SPL
Sbjct: 124 DNVAVVENPCI-ELQVSKQLNDL-VMNTNDYQNELLSQLP--NFDQV--EINDAQMISPL 183

Query: 181 FCLGEEDHGVFGFCNSNNFVERSAFDVSVEENFVGYPW 219
           FC+GEED G FG CN NN +E SAFDV+V+E F GY W
Sbjct: 184 FCIGEED-GFFG-CNPNNAMENSAFDVAVDETF-GYLW 212

[Close]

BLAST of HG10014880 vs. ExPASy TrEMBL
Match: A0A5A7UA24 (LOB domain-containing protein 33-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold88G00800 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 4.2e-79
Identity = 157/189 (83.07%), Postives = 168/189 (88.89%), Query Frame = 0


Query: 35  YDEATSHFAAVHKVFGASNVSKLLLHLPMYIRSHAAITIAYEALERMRDPTYGCVAHIFA 94
           YDEATSHFAAVHKVFGASNVSKLLLHLP + RSHAAIT+AYEALERMRDPTYGC+AHIFA
Sbjct: 67  YDEATSHFAAVHKVFGASNVSKLLLHLPTHTRSHAAITVAYEALERMRDPTYGCIAHIFA 126

Query: 95  LQQEVVSLQEEIEVLGSQIANFAATGGSVVEVENPFIDQ-LQVSQQLNDFGMMNTNDYQN 154
           LQQEVVSLQEEIE+LGSQIAN A TGGS+  VENPFIDQ +QVSQQ++ F M NTN YQN
Sbjct: 127 LQQEVVSLQEEIEILGSQIANLATTGGSIAAVENPFIDQVVQVSQQMDGFEMTNTNYYQN 186

Query: 155 ELLSELPYQSFDNVQNDNNNGQMMSPLFCLGEEDHGVFGFCNSNNFVE-RSAFDVSVEEN 214
           EL SELPYQSFDN+QND N  QM+SPLFCLGEED GVF FCNSNN VE  SAFDVSVEEN
Sbjct: 187 ELASELPYQSFDNIQND-NTAQMISPLFCLGEED-GVFEFCNSNNVVESTSAFDVSVEEN 246

Query: 215 FVGYPWVVG 222
            VGYPW+VG
Sbjct: 247 CVGYPWIVG 253

[Close]

BLAST of HG10014880 vs. ExPASy TrEMBL
Match: A0A5D3BV37 (LOB domain-containing protein 33-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00610 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 4.2e-79
Identity = 157/189 (83.07%), Postives = 168/189 (88.89%), Query Frame = 0


Query: 35  YDEATSHFAAVHKVFGASNVSKLLLHLPMYIRSHAAITIAYEALERMRDPTYGCVAHIFA 94
           YDEATSHFAAVHKVFGASNVSKLLLHLP + RSHAAIT+AYEALERMRDPTYGC+AHIFA
Sbjct: 160 YDEATSHFAAVHKVFGASNVSKLLLHLPTHTRSHAAITVAYEALERMRDPTYGCIAHIFA 219

Query: 95  LQQEVVSLQEEIEVLGSQIANFAATGGSVVEVENPFIDQ-LQVSQQLNDFGMMNTNDYQN 154
           LQQEVVSLQEEIE+LGSQIAN A TGGS+  VENPFIDQ +QVSQQ++ F M NTN YQN
Sbjct: 220 LQQEVVSLQEEIEILGSQIANLATTGGSIAAVENPFIDQVVQVSQQMDGFEMTNTNYYQN 279

Query: 155 ELLSELPYQSFDNVQNDNNNGQMMSPLFCLGEEDHGVFGFCNSNNFVE-RSAFDVSVEEN 214
           EL SELPYQSFDN+QND N  QM+SPLFCLGEED GVF FCNSNN VE  SAFDVSVEEN
Sbjct: 280 ELASELPYQSFDNIQND-NTAQMISPLFCLGEED-GVFEFCNSNNVVESTSAFDVSVEEN 339

Query: 215 FVGYPWVVG 222
            VGYPW+VG
Sbjct: 340 CVGYPWIVG 346

[Close]

BLAST of HG10014880 vs. TAIR 10
Match: AT5G06080.1 (LOB domain-containing protein 33 )

HSP 1 Score: 174.9 bits (442), Expect = 7.3e-44
Identity = 91/150 (60.67%), Postives = 116/150 (77.33%), Query Frame = 0


Query: 7   SSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPMYIR 66
           +S  SSCGACKFLRRKC+  CVF+P+FSY++A+SHFAAVHKVFGASNVSK LLHLP + R
Sbjct: 2   ASHGSSCGACKFLRRKCNRDCVFSPYFSYEQASSHFAAVHKVFGASNVSKHLLHLPQHQR 61

Query: 67  SHAAITIAYEALERMRDPTYGCVAHIFALQQEVVSLQEEIEVLGSQIANFAATGGSVVEV 126
           + AAITI+YEAL RMRDP YGCVAHIFAL Q+VV+LQEEIE LGSQ+ NF+ +  +  ++
Sbjct: 62  NIAAITISYEALSRMRDPVYGCVAHIFALHQQVVTLQEEIEFLGSQMKNFSYSNQNGSQL 121

Query: 127 EN--PFIDQL-QVSQQLNDFGMMNTNDYQN 154
            N   F++Q+   +    D  ++N  D +N
Sbjct: 122 NNIPEFVNQMTMATTNFVDESVLNNADGRN 151

[Close]

BLAST of HG10014880 vs. TAIR 10
Match: AT3G58190.1 (lateral organ boundaries-domain 29 )

HSP 1 Score: 153.3 bits (386), Expect = 2.3e-37
Identity = 78/125 (62.40%), Postives = 94/125 (75.20%), Query Frame = 0


Query: 5   NSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPMY 64
           +SSSS S CGACKFLRRKC+  CVFAP+F +++  SHFAA+HKVFGASN SKLL HLP+ 
Sbjct: 4   SSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPIS 63

Query: 65  IRSHAAITIAYEALERMRDPTYGCVAHIFALQQEVVSLQEEIEVLGSQIANFAATGGSVV 124
            R  AAITI+YEA  R++DP YGCV+HIFALQQ+VV+LQ E+E+L  Q A       S  
Sbjct: 64  DRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADSPT 123

Query: 125 EVENP 130
             ENP
Sbjct: 124 S-ENP 127

[Close]

BLAST of HG10014880 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 )

HSP 1 Score: 144.4 bits (363), Expect = 1.1e-34
Identity = 68/113 (60.18%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 3   GLNSSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLP 62
           G +       CGACKFLRRKC   C+FAP+F  ++ +++FAAVHKVFGASNVSKLLLH+P
Sbjct: 28  GSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHIP 87

Query: 63  MYIRSHAAITIAYEALERMRDPTYGCVAHIFALQQEVVSLQEEIEVLGSQIAN 116
           ++ RS A +TI YEA  R+RDP YGCVAHIFALQQ+VV+LQ E+  L + +A+
Sbjct: 88  VHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLAS 140

[Close]

BLAST of HG10014880 vs. TAIR 10
Match: AT2G42430.1 (lateral organ boundaries-domain 16 )

HSP 1 Score: 140.6 bits (353), Expect = 1.5e-33
Identity = 67/134 (50.00%), Postives = 93/134 (69.40%), Query Frame = 0


Query: 6   SSSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPMYI 65
           ++ + S CGACKFLRRKC+  C+FAP+FS ++  + FAA+HKVFGASNVSKLLL++P++ 
Sbjct: 9   TAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNVPIHD 68

Query: 66  RSHAAITIAYEALERMRDPTYGCVAHIFALQQEVVSLQEEIEVLGSQIANFAATGGSVVE 125
           R  A +TIAYEA  R+ DP YGCV+HIFALQQ+V  LQ ++  + +QIA    +    + 
Sbjct: 69  RCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAAGDLR 128

Query: 126 VENPFIDQLQVSQQ 140
             +   +Q    QQ
Sbjct: 129 HSSESTNQFMTWQQ 142

[Close]

BLAST of HG10014880 vs. TAIR 10
Match: AT2G42440.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 139.8 bits (351), Expect = 2.6e-33
Identity = 74/160 (46.25%), Postives = 102/160 (63.75%), Query Frame = 0


Query: 7   SSSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPMYIR 66
           + S S CGACKFLRR+C   CVFAP+F +++  SHFAA+H+VFGASN SKLL HLPM  R
Sbjct: 2   TGSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMEDR 61

Query: 67  SHAAITIAYEALERMRDPTYGCVAHIFALQQEVVSLQEEIEVLGSQIANFAATGGSVVEV 126
             AA TI YEA  R +DP YGCV+HIF+LQQ+VV+LQ ++E+L  Q         S++ +
Sbjct: 62  REAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQ------SMMAI 121

Query: 127 ENPFIDQLQVSQQLNDFGMMNTNDYQNELLSELPYQSFDN 167
           ++P I+     Q      +  ++D  +  L+    Q+  N
Sbjct: 122 DSPSIENPNYYQDTKPQYLQESHDLHHHHLTTSNCQTEQN 155

The following BLAST results are available for this feature:

BLAST of HG10014880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889414.1	5.7e-107	89.33	LOB domain-containing protein 33-like [Benincasa hispida]	[more]
XP_004147712.1	6.5e-103	85.97	LOB domain-containing protein 33 [Cucumis sativus] >KGN50569.1 hypothetical prot...	[more]
XP_008461694.1	4.9e-98	84.75	PREDICTED: LOB domain-containing protein 33-like [Cucumis melo]	[more]
XP_023542245.1	9.2e-81	76.92	LOB domain-containing protein 33-like [Cucurbita pepo subsp. pepo]	[more]
XP_022941701.1	3.5e-80	76.15	LOB domain-containing protein 33-like [Cucurbita moschata]	[more]

BLAST of HG10014880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LHS8	1.0e-42	60.67	LOB domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=LBD33 PE=2 S...	[more]
Q9M2J7	3.2e-36	62.40	LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 S...	[more]
O22131	1.5e-33	60.18	LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 S...	[more]
Q5UG13	1.3e-32	64.42	LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=C...	[more]
Q9SLB7	2.2e-32	50.00	LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 S...	[more]

BLAST of HG10014880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNX8	3.2e-103	85.97	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G182740 PE=3 SV...	[more]
A0A1S3CGM1	2.3e-98	84.75	LOB domain-containing protein 33-like OS=Cucumis melo OX=3656 GN=LOC103500235 PE...	[more]
A0A6J1FLU4	1.7e-80	76.15	LOB domain-containing protein 33-like OS=Cucurbita moschata OX=3662 GN=LOC111446...	[more]
A0A5A7UA24	4.2e-79	83.07	LOB domain-containing protein 33-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5D3BV37	4.2e-79	83.07	LOB domain-containing protein 33-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of HG10014880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06080.1	7.3e-44	60.67	LOB domain-containing protein 33	[more]
AT3G58190.1	2.3e-37	62.40	lateral organ boundaries-domain 29	[more]
AT2G45420.1	1.1e-34	60.18	LOB domain-containing protein 18	[more]
AT2G42430.1	1.5e-33	50.00	lateral organ boundaries-domain 16	[more]
AT2G42440.1	2.6e-33	46.25	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 92..112
None	No IPR available	PANTHER	PTHR31529:SF50	LOB DOMAIN-CONTAINING PROTEIN 33	coord: 1..176
None	No IPR available	PANTHER	PTHR31529	LOB DOMAIN CONTAINING PROTEIN	coord: 1..176
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 12..109 e-value: 1.7E-32 score: 111.9
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 11..113 score: 21.563196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10014880.1	HG10014880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009755	hormone-mediated signaling pathway
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus