
HG10014876 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGAAACCCATCAAGTATGGAGAGAAATTCTGAAAACGACGGCGTATTGGGATCAAGAGAAGGCGTTTGCCGACGACGTTGCAGCCGTGTGGCCGCCGAGATCTTACTCTTGCAACTTCTGTATGAGACAATTCCGATCAGCTCAAGCTTTGGGTGGCCACATGAATGTTCATCGAAGAGACCGTGCTAAGCTTCAAAACCATCCCAACCCTCCATTCTTCATCAAACCAACTCCCATCTTTGATCTTCTTCCTCACCATTTTTCTCCCAAAAACAACACTTCCCCTCTTTATAATCCTCCCTTCTCTCTCAAAAGACCTAAACTTTCTTCTTCTTCTTCTCCTTCTAATAATGCTGATCTTCACCTTGATCTTGAGCTCAAGCTTTAA ATGGCAGAAACCCATCAAGTATGGAGAGAAATTCTGAAAACGACGGCGTATTGGGATCAAGAGAAGGCGTTTGCCGACGACGTTGCAGCCGTGTGGCCGCCGAGATCTTACTCTTGCAACTTCTGTATGAGACAATTCCGATCAGCTCAAGCTTTGGGTGGCCACATGAATGTTCATCGAAGAGACCGTGCTAAGCTTCAAAACCATCCCAACCCTCCATTCTTCATCAAACCAACTCCCATCTTTGATCTTCTTCCTCACCATTTTTCTCCCAAAAACAACACTTCCCCTCTTTATAATCCTCCCTTCTCTCTCAAAAGACCTAAACTTTCTTCTTCTTCTTCTCCTTCTAATAATGCTGATCTTCACCTTGATCTTGAGCTCAAGCTTTAA ATGGCAGAAACCCATCAAGTATGGAGAGAAATTCTGAAAACGACGGCGTATTGGGATCAAGAGAAGGCGTTTGCCGACGACGTTGCAGCCGTGTGGCCGCCGAGATCTTACTCTTGCAACTTCTGTATGAGACAATTCCGATCAGCTCAAGCTTTGGGTGGCCACATGAATGTTCATCGAAGAGACCGTGCTAAGCTTCAAAACCATCCCAACCCTCCATTCTTCATCAAACCAACTCCCATCTTTGATCTTCTTCCTCACCATTTTTCTCCCAAAAACAACACTTCCCCTCTTTATAATCCTCCCTTCTCTCTCAAAAGACCTAAACTTTCTTCTTCTTCTTCTCCTTCTAATAATGCTGATCTTCACCTTGATCTTGAGCTCAAGCTTTAA MAETHQVWREILKTTAYWDQEKAFADDVAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNPPFFIKPTPIFDLLPHHFSPKNNTSPLYNPPFSLKRPKLSSSSSPSNNADLHLDLELKL Homology
BLAST of HG10014876 vs. NCBI nr
Match: XP_008461701.1 (PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo] >KAA0050359.1 transcriptional regulator SUPERMAN-like [Cucumis melo var. makuwa] >TYK03572.1 transcriptional regulator SUPERMAN-like [Cucumis melo var. makuwa]) HSP 1 Score: 232.3 bits (591), Expect = 2.4e-57 Identity = 113/131 (86.26%), Postives = 120/131 (91.60%), Query Frame = 0
BLAST of HG10014876 vs. NCBI nr
Match: XP_004151402.2 (zinc finger protein 11 [Cucumis sativus] >KGN50575.1 hypothetical protein Csa_021472 [Cucumis sativus]) HSP 1 Score: 224.9 bits (572), Expect = 3.9e-55 Identity = 112/135 (82.96%), Postives = 120/135 (88.89%), Query Frame = 0
BLAST of HG10014876 vs. NCBI nr
Match: XP_023542190.1 (zinc finger protein 10-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 149.4 bits (376), Expect = 2.1e-32 Identity = 85/137 (62.04%), Postives = 94/137 (68.61%), Query Frame = 0
BLAST of HG10014876 vs. NCBI nr
Match: XP_022988302.1 (zinc finger protein 10-like [Cucurbita maxima]) HSP 1 Score: 147.5 bits (371), Expect = 7.9e-32 Identity = 84/137 (61.31%), Postives = 94/137 (68.61%), Query Frame = 0
BLAST of HG10014876 vs. NCBI nr
Match: KAG6600035.1 (Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030703.1 Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 144.8 bits (364), Expect = 5.1e-31 Identity = 83/137 (60.58%), Postives = 94/137 (68.61%), Query Frame = 0
BLAST of HG10014876 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 7.5e-17 Identity = 48/98 (48.98%), Postives = 62/98 (63.27%), Query Frame = 0
BLAST of HG10014876 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 5.4e-15 Identity = 43/89 (48.31%), Postives = 58/89 (65.17%), Query Frame = 0
BLAST of HG10014876 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 7.7e-14 Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 0
BLAST of HG10014876 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2) HSP 1 Score: 76.6 bits (187), Expect = 2.2e-13 Identity = 37/67 (55.22%), Postives = 46/67 (68.66%), Query Frame = 0
BLAST of HG10014876 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.8e-08 Identity = 25/33 (75.76%), Postives = 30/33 (90.91%), Query Frame = 0
BLAST of HG10014876 vs. ExPASy TrEMBL
Match: A0A5A7UA35 (Transcriptional regulator SUPERMAN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00710 PE=4 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 1.2e-57 Identity = 113/131 (86.26%), Postives = 120/131 (91.60%), Query Frame = 0
BLAST of HG10014876 vs. ExPASy TrEMBL
Match: A0A1S3CGM6 (transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103500239 PE=4 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 1.2e-57 Identity = 113/131 (86.26%), Postives = 120/131 (91.60%), Query Frame = 0
BLAST of HG10014876 vs. ExPASy TrEMBL
Match: A0A0A0KLQ3 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G183770 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 1.9e-55 Identity = 112/135 (82.96%), Postives = 120/135 (88.89%), Query Frame = 0
BLAST of HG10014876 vs. ExPASy TrEMBL
Match: A0A6J1JCP1 (zinc finger protein 10-like OS=Cucurbita maxima OX=3661 GN=LOC111485589 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 3.8e-32 Identity = 84/137 (61.31%), Postives = 94/137 (68.61%), Query Frame = 0
BLAST of HG10014876 vs. ExPASy TrEMBL
Match: A0A6J1CVW0 (transcriptional regulator SUPERMAN-like OS=Momordica charantia OX=3673 GN=LOC111015051 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 1.6e-17 Identity = 50/82 (60.98%), Postives = 59/82 (71.95%), Query Frame = 0
BLAST of HG10014876 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 88.2 bits (217), Expect = 5.3e-18 Identity = 48/98 (48.98%), Postives = 62/98 (63.27%), Query Frame = 0
BLAST of HG10014876 vs. TAIR 10
Match: AT2G37740.1 (zinc-finger protein 10 ) HSP 1 Score: 82.0 bits (201), Expect = 3.8e-16 Identity = 43/89 (48.31%), Postives = 58/89 (65.17%), Query Frame = 0
BLAST of HG10014876 vs. TAIR 10
Match: AT2G42410.1 (zinc finger protein 11 ) HSP 1 Score: 78.2 bits (191), Expect = 5.5e-15 Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 0
BLAST of HG10014876 vs. TAIR 10
Match: AT4G17810.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 77.4 bits (189), Expect = 9.4e-15 Identity = 35/53 (66.04%), Postives = 38/53 (71.70%), Query Frame = 0
BLAST of HG10014876 vs. TAIR 10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 76.6 bits (187), Expect = 1.6e-14 Identity = 37/67 (55.22%), Postives = 46/67 (68.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|