HG10014832 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10014832
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	CCHC-type domain-containing protein
Location	Chr02: 20623364 .. 20624380 (-)
RNA-Seq Expression	HG10014832
Synteny	HG10014832

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCTAAAACTTGGCCCTTGGCTTTTCGACAGTTCTTTACTGGTGGTGGAAGACCCAAAAGCTAATGTCAAATTATCCAAACTTTCTTTTGATAAAGTGGCATTCTGGATTCGTCTAATGGATATTCCACTAAGTTTCCAAAATAGATTCATGGCTAAAAATTTAGGAGATGCTTTATGCAAATTCTTAGAAGTTGACTGTGATCAAGAAAAATTTTACTGGGGGGGGGGGGGGGGGGGAGAGAGTTTGCATATCAAAGTTATGATGGATATCACAAAACCCTTAAGAAGAGGAATCTGGATTGAACCAGGAGGAGATCAAGAAAAACAATGGATTAATGTTAAATATGAAAGGTTGCCTGATTTCTGTTATGGTTGTGGCAGAATTGGTCATGTAATCAAGATTTGCAATTTTGTAATAGATGTTGTTGATTCTGATCCTGAAGCTTGGCAATATGGGAGTTGGTTGAGATTTCAAGAGAGTAATCCAAGAAAGCGTAGAAAGAGTCCTCAAAGAAACGAGAAAGAAGGTTCCCATGCTGAATCCTCAGCCTTCCAAACAGAAAATTCTCCACAAAAAGAAAATCTTGGCAAATCCTCAAAGATCTCAAACACAAAATCAACCTCTGCTGTCAGCAAAGGGAATCTTGATCCAAACTTTCTGAACTCAAATTCTGTTTTCGACCTCAACATAGGACCTCCGGATAGTGAGCCCTTTAAAGGAAATCAAGAAACCTCTCACTGGTTCAATGACTCTCAACAATCTCATAAGACAGTGGCGGTTGAACTACAGAATGAGACAATTTTAGATCCTAATGAAGAACATACGGGAAACAAGGTTTCAATTGGAAAAAAGCCAAAAGATTGGAAAAGAAGGACCAGGTCTGATTCTAGATTCTCAAATCACTCTATGAAAACACAATATGAGCAGAAGAGAAAGGGAGTGCCTTTGTTCAATCCTTCAGAGTTCAAGAAAAAAAGGGAAACCTCTTACCTGTATTCAGGAATGAAATAG

mRNA sequence

ATGGTTCTAAAACTTGGCCCTTGGCTTTTCGACAGTTCTTTACTGGTGGTGGAAGACCCAAAAGCTAATGTCAAATTATCCAAACTTTCTTTTGATAAAGTGGCATTCTGGATTCGTCTAATGGATATTCCACTAAGTTTCCAAAATAGATTCATGGCTAAAAATTTAGGAGATGCTTTATGCAAATTCTTAGAAGTTGACTGTGATCAAGAAAAATTTTACTGGGGGGGGGGGGGGGGGGGAGAGAGTTTGCATATCAAAGTTATGATGGATATCACAAAACCCTTAAGAAGAGGAATCTGGATTGAACCAGGAGGAGATCAAGAAAAACAATGGATTAATGTTAAATATGAAAGGTTGCCTGATTTCTGTTATGGTTGTGGCAGAATTGGTCATGTAATCAAGATTTGCAATTTTGTAATAGATGTTGTTGATTCTGATCCTGAAGCTTGGCAATATGGGAGTTGGTTGAGATTTCAAGAGAGTAATCCAAGAAAGCGTAGAAAGAGTCCTCAAAGAAACGAGAAAGAAGGTTCCCATGCTGAATCCTCAGCCTTCCAAACAGAAAATTCTCCACAAAAAGAAAATCTTGGCAAATCCTCAAAGATCTCAAACACAAAATCAACCTCTGCTGTCAGCAAAGGGAATCTTGATCCAAACTTTCTGAACTCAAATTCTGTTTTCGACCTCAACATAGGACCTCCGGATAGTGAGCCCTTTAAAGGAAATCAAGAAACCTCTCACTGGTTCAATGACTCTCAACAATCTCATAAGACAGTGGCGGTTGAACTACAGAATGAGACAATTTTAGATCCTAATGAAGAACATACGGGAAACAAGGTTTCAATTGGAAAAAAGCCAAAAGATTGGAAAAGAAGGACCAGGTCTGATTCTAGATTCTCAAATCACTCTATGAAAACACAATATGAGCAGAAGAGAAAGGGAGTGCCTTTGTTCAATCCTTCAGAGTTCAAGAAAAAAAGGGAAACCTCTTACCTGTATTCAGGAATGAAATAG

Coding sequence (CDS)

ATGGTTCTAAAACTTGGCCCTTGGCTTTTCGACAGTTCTTTACTGGTGGTGGAAGACCCAAAAGCTAATGTCAAATTATCCAAACTTTCTTTTGATAAAGTGGCATTCTGGATTCGTCTAATGGATATTCCACTAAGTTTCCAAAATAGATTCATGGCTAAAAATTTAGGAGATGCTTTATGCAAATTCTTAGAAGTTGACTGTGATCAAGAAAAATTTTACTGGGGGGGGGGGGGGGGGGGAGAGAGTTTGCATATCAAAGTTATGATGGATATCACAAAACCCTTAAGAAGAGGAATCTGGATTGAACCAGGAGGAGATCAAGAAAAACAATGGATTAATGTTAAATATGAAAGGTTGCCTGATTTCTGTTATGGTTGTGGCAGAATTGGTCATGTAATCAAGATTTGCAATTTTGTAATAGATGTTGTTGATTCTGATCCTGAAGCTTGGCAATATGGGAGTTGGTTGAGATTTCAAGAGAGTAATCCAAGAAAGCGTAGAAAGAGTCCTCAAAGAAACGAGAAAGAAGGTTCCCATGCTGAATCCTCAGCCTTCCAAACAGAAAATTCTCCACAAAAAGAAAATCTTGGCAAATCCTCAAAGATCTCAAACACAAAATCAACCTCTGCTGTCAGCAAAGGGAATCTTGATCCAAACTTTCTGAACTCAAATTCTGTTTTCGACCTCAACATAGGACCTCCGGATAGTGAGCCCTTTAAAGGAAATCAAGAAACCTCTCACTGGTTCAATGACTCTCAACAATCTCATAAGACAGTGGCGGTTGAACTACAGAATGAGACAATTTTAGATCCTAATGAAGAACATACGGGAAACAAGGTTTCAATTGGAAAAAAGCCAAAAGATTGGAAAAGAAGGACCAGGTCTGATTCTAGATTCTCAAATCACTCTATGAAAACACAATATGAGCAGAAGAGAAAGGGAGTGCCTTTGTTCAATCCTTCAGAGTTCAAGAAAAAAAGGGAAACCTCTTACCTGTATTCAGGAATGAAATAG

Protein sequence

MVLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALCKFLEVDCDQEKFYWGGGGGGESLHIKVMMDITKPLRRGIWIEPGGDQEKQWINVKYERLPDFCYGCGRIGHVIKICNFVIDVVDSDPEAWQYGSWLRFQESNPRKRRKSPQRNEKEGSHAESSAFQTENSPQKENLGKSSKISNTKSTSAVSKGNLDPNFLNSNSVFDLNIGPPDSEPFKGNQETSHWFNDSQQSHKTVAVELQNETILDPNEEHTGNKVSIGKKPKDWKRRTRSDSRFSNHSMKTQYEQKRKGVPLFNPSEFKKKRETSYLYSGMK

Homology

[Close]

BLAST of HG10014832 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 166.0 bits (419), Expect = 5.6e-37
Identity = 84/188 (44.68%), Postives = 118/188 (62.77%), Query Frame = 0


Query: 2   VLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALC 61
           V+K GPW FD +L+V++ P ++  +S+L F++VAFWI L D+P+S+ N+ MA  LG+A+ 
Sbjct: 94  VMKTGPWFFDKALIVLQKPCSSKNISELEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIG 153

Query: 62  KFLEVDCDQEKFYWGGGGGGESLHIKVMMDITKPLRRGIWIEPGGDQEKQWINVKYERLP 121
            F++VDC+++ F WG      SL I+V++DITKPLRRGI I   G     WI ++YERLP
Sbjct: 154 NFVDVDCNEKGFSWGA-----SLRIRVLIDITKPLRRGIKINIDGPMGGCWIPIQYERLP 213

Query: 122 DFCYGCGRIGHVIKICNFVIDVVDSDPEAW-QYGSWLRFQES----NPRKRRKSPQRNEK 181
           DFCY CG IGH    C+        D  A  +YG WLRF  S       ++ KSP R + 
Sbjct: 214 DFCYFCGVIGHSSHDCDARYLAAQDDSRATSEYGPWLRFVGSKAGAQKGRKGKSPAREDS 273

Query: 182 EGSHAESS 185
            GS + +S
Sbjct: 274 CGSSSMNS 276

[Close]

BLAST of HG10014832 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 140.2 bits (352), Expect = 3.3e-29
Identity = 62/159 (38.99%), Postives = 94/159 (59.12%), Query Frame = 0


Query: 2   VLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALC 61
           +L++GPW FD +L+++++P +  K   + F  V+ W+   D+ L+  N+ MA  LG+A+ 
Sbjct: 95  ILRMGPWTFDRALIIIDNPVSLTKPLDMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIG 154

Query: 62  KFLEVDCDQEKFYWGGGGGGESLHIKVMMDITKPLRRGIWIEPGGDQEKQWINVKYERLP 121
            F +V+ +   F W     G  L ++V  D+ KPL RGI +   G     WI ++YERLP
Sbjct: 155 LFEDVESNANNFCW-----GSCLRVRVRFDVMKPLHRGIKLNLDGPMGGCWIPIQYERLP 214

Query: 122 DFCYGCGRIGHVIKICNFVIDVVDSDPEAWQYGSWLRFQ 161
           DF Y CGR+ H++K C+     VDS  +  QYG WLRFQ
Sbjct: 215 DFRYHCGRLDHILKDCSDC--CVDSVSKNLQYGPWLRFQ 246

[Close]

BLAST of HG10014832 vs. NCBI nr
Match: TXG50019.1 (hypothetical protein EZV62_025894 [Acer yangbiense])

HSP 1 Score: 136.7 bits (343), Expect = 3.6e-28
Identity = 63/160 (39.38%), Postives = 99/160 (61.88%), Query Frame = 0


Query: 2   VLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALC 61
           VL+ GPW FD +LLV+E+P     + ++ FDKVAFWI++  +PL      + + LG  + 
Sbjct: 93  VLRGGPWSFDKALLVLEEPTGKGDIREMKFDKVAFWIQIHKVPLLCMTSEIGRFLGSMIG 152

Query: 62  KFLEVDCDQEKFYWGGGGG---GESLHIKVMMDITKPLRRGIWIEPGGDQEKQWINVKYE 121
           +  E+D         GG G   G+ + ++V++D+TKPLRR + ++  GD ++  + ++YE
Sbjct: 153 EVKEID--------DGGSGDCVGKYIRVRVVVDVTKPLRRMLRVDVLGDGKETNMLLRYE 212

Query: 122 RLPDFCYGCGRIGHVIKICNFVIDVVDSDPEAWQYGSWLR 159
           RLPD CY CGRIGHV++ C+ V   V+ +     +GSWLR
Sbjct: 213 RLPDHCYRCGRIGHVVRDCSIVPSSVEPEDYNLMFGSWLR 244

[Close]

BLAST of HG10014832 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 134.0 bits (336), Expect = 2.4e-27
Identity = 80/215 (37.21%), Postives = 109/215 (50.70%), Query Frame = 0


Query: 2   VLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALC 61
           + K GPW FD +L+++  P A +  S+L F K+  W+R  D+PL    R MA  LG+AL 
Sbjct: 95  IYKSGPWTFDRTLVLINKPVALIPPSELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALG 154

Query: 62  KFLEVDCDQEKFYWGGGGGGESLHIKVMMDITKPLRRGIWIEPGGDQEKQWINVKYERLP 121
            F E DCD     W     G +L ++VM+DI+KPLRRGI +   G     WI ++YERLP
Sbjct: 155 GFEEADCDDLNPDW-----GSNLRVRVMLDISKPLRRGIKLNLDGPIGGAWIPIQYERLP 214

Query: 122 DFCYGCGRIGHVIKICNFVIDVVDSDPEAWQYGSWLRFQESNPRKRRKSPQRNEKEGSHA 181
           DFCY CG               + S  +  QYGSWLR+Q +    +   PQ  +      
Sbjct: 215 DFCYHCG---------------LSSSRKKHQYGSWLRYQGT---VKPTMPQMKQ------ 270

Query: 182 ESSAFQTENSPQKENLGKSSKISNTKSTSAVSKGN 217
                     PQ++ L KS   S + STS V  G+
Sbjct: 275 ----------PQEDLLDKSGNNSFSSSTSPVGAGS 270

[Close]

BLAST of HG10014832 vs. NCBI nr
Match: XP_021749726.1 (uncharacterized protein LOC110715454 [Chenopodium quinoa])

HSP 1 Score: 132.5 bits (332), Expect = 6.9e-27
Identity = 65/172 (37.79%), Postives = 101/172 (58.72%), Query Frame = 0


Query: 1   MVLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDAL 60
           MVL   PW FD  L+V+ +     + S++ F     W+RL+D+P S +N+     +GD L
Sbjct: 91  MVLDGCPWFFDGKLIVIREINGEEQPSEVFFHHAPMWVRLVDVPFSKRNKKTLIEIGDFL 150

Query: 61  CKFLEVDCDQEKFYWGGGGGGESLHIKVMMDITKPLRRGIWIEPGGDQEKQWINVKYERL 120
             FLE+D D +   W     GE + +KVM+D+ KPLRRG+++  G    K W+ +KYERL
Sbjct: 151 GTFLEID-DTDPLGW-----GEFVRMKVMIDVGKPLRRGLFLVVGTASSK-WVTLKYERL 210

Query: 121 PDFCYGCGRIGHVIKICNFVIDVVDSDPE-AWQYGSWLRFQESNPRKRRKSP 172
            +FC+ CGR+ H    C++  +  +++ E  +QYG WLR   ++PRK  + P
Sbjct: 211 DEFCFFCGRLDHTDSSCSYKDEASETNAEIVYQYGPWLR---ASPRKTIRKP 252

[Close]

BLAST of HG10014832 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 2.7e-37
Identity = 84/188 (44.68%), Postives = 118/188 (62.77%), Query Frame = 0


Query: 2   VLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALC 61
           V+K GPW FD +L+V++ P ++  +S+L F++VAFWI L D+P+S+ N+ MA  LG+A+ 
Sbjct: 94  VMKTGPWFFDKALIVLQKPCSSKNISELEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIG 153

Query: 62  KFLEVDCDQEKFYWGGGGGGESLHIKVMMDITKPLRRGIWIEPGGDQEKQWINVKYERLP 121
            F++VDC+++ F WG      SL I+V++DITKPLRRGI I   G     WI ++YERLP
Sbjct: 154 NFVDVDCNEKGFSWGA-----SLRIRVLIDITKPLRRGIKINIDGPMGGCWIPIQYERLP 213

Query: 122 DFCYGCGRIGHVIKICNFVIDVVDSDPEAW-QYGSWLRFQES----NPRKRRKSPQRNEK 181
           DFCY CG IGH    C+        D  A  +YG WLRF  S       ++ KSP R + 
Sbjct: 214 DFCYFCGVIGHSSHDCDARYLAAQDDSRATSEYGPWLRFVGSKAGAQKGRKGKSPAREDS 273

Query: 182 EGSHAESS 185
            GS + +S
Sbjct: 274 CGSSSMNS 276

[Close]

BLAST of HG10014832 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.6e-29
Identity = 62/159 (38.99%), Postives = 94/159 (59.12%), Query Frame = 0


Query: 2   VLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALC 61
           +L++GPW FD +L+++++P +  K   + F  V+ W+   D+ L+  N+ MA  LG+A+ 
Sbjct: 95  ILRMGPWTFDRALIIIDNPVSLTKPLDMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIG 154

Query: 62  KFLEVDCDQEKFYWGGGGGGESLHIKVMMDITKPLRRGIWIEPGGDQEKQWINVKYERLP 121
            F +V+ +   F W     G  L ++V  D+ KPL RGI +   G     WI ++YERLP
Sbjct: 155 LFEDVESNANNFCW-----GSCLRVRVRFDVMKPLHRGIKLNLDGPMGGCWIPIQYERLP 214

Query: 122 DFCYGCGRIGHVIKICNFVIDVVDSDPEAWQYGSWLRFQ 161
           DF Y CGR+ H++K C+     VDS  +  QYG WLRFQ
Sbjct: 215 DFRYHCGRLDHILKDCSDC--CVDSVSKNLQYGPWLRFQ 246

[Close]

BLAST of HG10014832 vs. ExPASy TrEMBL
Match: A0A5C7GZQ4 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_025894 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.8e-28
Identity = 63/160 (39.38%), Postives = 99/160 (61.88%), Query Frame = 0


Query: 2   VLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALC 61
           VL+ GPW FD +LLV+E+P     + ++ FDKVAFWI++  +PL      + + LG  + 
Sbjct: 93  VLRGGPWSFDKALLVLEEPTGKGDIREMKFDKVAFWIQIHKVPLLCMTSEIGRFLGSMIG 152

Query: 62  KFLEVDCDQEKFYWGGGGG---GESLHIKVMMDITKPLRRGIWIEPGGDQEKQWINVKYE 121
           +  E+D         GG G   G+ + ++V++D+TKPLRR + ++  GD ++  + ++YE
Sbjct: 153 EVKEID--------DGGSGDCVGKYIRVRVVVDVTKPLRRMLRVDVLGDGKETNMLLRYE 212

Query: 122 RLPDFCYGCGRIGHVIKICNFVIDVVDSDPEAWQYGSWLR 159
           RLPD CY CGRIGHV++ C+ V   V+ +     +GSWLR
Sbjct: 213 RLPDHCYRCGRIGHVVRDCSIVPSSVEPEDYNLMFGSWLR 244

[Close]

BLAST of HG10014832 vs. ExPASy TrEMBL
Match: A0A803LAB8 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-27
Identity = 71/173 (41.04%), Postives = 103/173 (59.54%), Query Frame = 0


Query: 7   PWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALCKFLEV 66
           PW FD  LLV+++ K   + S++ F     W+RL+D+P + +N+     +GD L  FLE 
Sbjct: 99  PWFFDGKLLVLKEIKGEEQPSEVEFKFAPMWVRLLDVPFNKRNKKTMTEIGDFLGCFLEA 158

Query: 67  DCDQEKFYWGGGGGGESLHIKVMMDITKPLRRGIWIEPGGDQEKQWINVKYERLPDFCYG 126
           D D +   W     GE L IKVM+DI KPLRRG+++  G    K W+ +KYERL +FC+ 
Sbjct: 159 D-DSDPLGW-----GEFLRIKVMIDIAKPLRRGLFLATGPSSSK-WVALKYERLDEFCFF 218

Query: 127 CGRIGHVIKICNFVIDVVDSDPE-AWQYGSWLRFQESNPRKR-RKSPQRNEKE 178
           CGR+ H    C+F  +  + + +  +QYG WLR   ++PRK+ RKS    EKE
Sbjct: 219 CGRLDHTEMGCSFKDEAKEVNADIVYQYGPWLR---ASPRKQIRKSEAEIEKE 261

[Close]

BLAST of HG10014832 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-27
Identity = 80/215 (37.21%), Postives = 109/215 (50.70%), Query Frame = 0


Query: 2   VLKLGPWLFDSSLLVVEDPKANVKLSKLSFDKVAFWIRLMDIPLSFQNRFMAKNLGDALC 61
           + K GPW FD +L+++  P A +  S+L F K+  W+R  D+PL    R MA  LG+AL 
Sbjct: 95  IYKSGPWTFDRTLVLINKPVALIPPSELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALG 154

Query: 62  KFLEVDCDQEKFYWGGGGGGESLHIKVMMDITKPLRRGIWIEPGGDQEKQWINVKYERLP 121
            F E DCD     W     G +L ++VM+DI+KPLRRGI +   G     WI ++YERLP
Sbjct: 155 GFEEADCDDLNPDW-----GSNLRVRVMLDISKPLRRGIKLNLDGPIGGAWIPIQYERLP 214

Query: 122 DFCYGCGRIGHVIKICNFVIDVVDSDPEAWQYGSWLRFQESNPRKRRKSPQRNEKEGSHA 181
           DFCY CG               + S  +  QYGSWLR+Q +    +   PQ  +      
Sbjct: 215 DFCYHCG---------------LSSSRKKHQYGSWLRYQGT---VKPTMPQMKQ------ 270

Query: 182 ESSAFQTENSPQKENLGKSSKISNTKSTSAVSKGN 217
                     PQ++ L KS   S + STS V  G+
Sbjct: 275 ----------PQEDLLDKSGNNSFSSSTSPVGAGS 270

The following BLAST results are available for this feature:

BLAST of HG10014832 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156185.1	5.6e-37	44.68	uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha...	[more]
XP_022132681.1	3.3e-29	38.99	uncharacterized protein LOC111005481 [Momordica charantia]	[more]
TXG50019.1	3.6e-28	39.38	hypothetical protein EZV62_025894 [Acer yangbiense]	[more]
XP_022158377.1	2.4e-27	37.21	uncharacterized protein LOC111024874 [Momordica charantia]	[more]
XP_021749726.1	6.9e-27	37.79	uncharacterized protein LOC110715454 [Chenopodium quinoa]	[more]

BLAST of HG10014832 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10014832 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DU55	2.7e-37	44.68	uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1BSZ1	1.6e-29	38.99	uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A5C7GZQ4	1.8e-28	39.38	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02589...	[more]
A0A803LAB8	1.1e-27	41.04	Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1	[more]
A0A6J1DX30	1.1e-27	37.21	uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]

BLAST of HG10014832 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 2..72 e-value: 1.5E-8 score: 34.3
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 90..138 e-value: 3.5E-16 score: 58.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 273..319
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 273..310
None	No IPR available	PANTHER	PTHR31286:SF26	BNAC07G15150D PROTEIN	coord: 4..188
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 4..188
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 124..137 score: 8.812096

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10014832.1	HG10014832.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding