HG10014652 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10014652
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr02: 17301766 .. 17301960 (+)
RNA-Seq ExpressionHG10014652
SyntenyHG10014652
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGCCGGAGTTGGCCACATGTGGTAGTTGCCAGAGTTGGCCGTCGGAGGTGGTCGCCGGAGTTGGCCGTCAACAGTGGTGGTTGAATGTTACCGGAGTTGGTTGCATGCATTGGTCGTCGGAGGTGGTCGCTGGAGTTGGTCGTCAAAGGTGGTCACCGGAGTTGGTCGTTGGAGGTAGTCGCTGGAGTTAG

mRNA sequence

ATGTTGCCGGAGTTGGCCACATGTGGTAGTTGCCAGAGTTGGCCGTCGGAGGTGGTCGCCGGAGTTGGCCGTCAACAGTGGTGGTTGAATGTTACCGGAGTTGGTTGCATGCATTGGTCGTCGGAGGTGGTCGCTGGAGTTGGTCGTCAAAGGTGGTCACCGGAGTTGGTCGTTGGAGGTAGTCGCTGGAGTTAG

Coding sequence (CDS)

ATGTTGCCGGAGTTGGCCACATGTGGTAGTTGCCAGAGTTGGCCGTCGGAGGTGGTCGCCGGAGTTGGCCGTCAACAGTGGTGGTTGAATGTTACCGGAGTTGGTTGCATGCATTGGTCGTCGGAGGTGGTCGCTGGAGTTGGTCGTCAAAGGTGGTCACCGGAGTTGGTCGTTGGAGGTAGTCGCTGGAGTTAG

Protein sequence

MLPELATCGSCQSWPSEVVAGVGRQQWWLNVTGVGCMHWSSEVVAGVGRQRWSPELVVGGSRWS
Homology
[Close]
BLAST of HG10014652 vs. NCBI nr
Match: XP_010501877.1 (PREDICTED: uncharacterized protein LOC104779199 [Camelina sativa] >XP_010501878.1 PREDICTED: uncharacterized protein LOC104779200 [Camelina sativa])

HSP 1 Score: 66.2 bits (160), Expect = 1.1e-07
Identity = 37/68 (54.41%), Postives = 41/68 (60.29%), Query Frame = 0 

Query: 2  LPELATCGSCQSWPSEVVAGVGRQQWW-LNVTGVGCMHWSSEVVAGVGR----QRWSPEL 61
          LPEL   G  +SW   VVAGVGR+ W    V GVG   WS E+VAG GR    +RWSPEL
Sbjct: 25 LPELVAGGGRRSWSPAVVAGVGRRSWSPAMVAGVGRRRWSPELVAGDGRRRCHRRWSPEL 84

Query: 62 VVGGSRWS 65
          V G  R S
Sbjct: 85 VAGDDRRS 92

The following BLAST results are available for this feature:
BLAST of HG10014652 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_010501877.11.1e-0754.41PREDICTED: uncharacterized protein LOC104779199 [Camelina sativa] >XP_010501878.... [more]
BLAST of HG10014652 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of HG10014652 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of HG10014652 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10014652.1HG10014652.1mRNA