HG10013813 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10013813
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein NPG1-like
Location	Chr02: 4961064 .. 4965835 (+)
RNA-Seq Expression	HG10013813
Synteny	HG10013813

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCATCACATCTGTTGTTCCATCAGGTCTAATGTGTGAAGGACGTGAGCAAATACAAGAAGCTCTAGCTGCTTATATTAATGCTCTCCTACTCGAACCATGCTATGTTCCTTGCAAGGTTTTGATTGGTGCTCTTTGGTCGAAAGCGGGCCCAGATGCATTGCCTATAGCAAGAAGCTTACTTTCAGACGCATTGAGATTAGATCCCACCAACCGTAAGGCTTGGTTTTACTTAGGGGTCATTCATAGGGACGAAGGACGAATGGCCGACGCCATAGACTGTTTCCAGGCAGCCGCTATGCTTGAAGAAACAGATCCCATTGAAAGCTTCAGCAGTATTCTCTAGTCAGTCGTTAATTTATTGAAGGTCTCAGTTTTCATTATTTTTTCTTCGTGGATGAAGTCATTTTAGATTTAGATCAACCAAATTCTATAACTTTCGTAGAACAATTTTTCATTTTTCGTCAATACAGGTCGATCACGTCAAGCTGGCTATGCAATGGTCACAGGAGATGCATATGTTTCACTTTTTTCGAAGCCGAAAAGAAGGCATCTGGCGAAATGTGAAGAACTATGCTGTAAGTTGTAACCGGAAAACTTAATCTATAAGTTTAATAAGATAAAAAAATCTGTTTCAAAACTATATAAATTTGAAGTTAGAAAGGATGAATTGTAGAGAGATGAGTTGGTGGATATTTTTCAAAAATTGATTGTTTGTTTTTACCATTCTTGCTCAGCAATGTATATTTATTCTTGTAACTGAGCAATATTAGAGGAATTATACTTTTTTTTTTTTTTTAATGTTTATTTGTTGTGATGTATGAAATTTTCTTCCAATCCAACCTCTCCAAGACTCTCAGGATTACTCAATATTTTTCTTAACCCTGCAATGACTGATGGAATTTTGTCATTTACTTTTATTTCCTTTGAATTTATTAACTGTCTTTTTTCATGAACAGACTCATTTTTAATTTTGGTTGCGGTTTAAATAGATTGATTAATAATCTTCGAGTGAATATATAAGAGAAGATTTGAATGCATCTTACAAATATTGGCATTTATATATATTGAGCTTAAGTAATAATAAAGCTGAAATTTTTGTTGGTAAAATGATGAAATTTGCACAAACACAAAAGTATAAAAACTTTTAAGATATATTTGACCTAACAGTTGAGTTGCTTTGAAGGGTAACTTCTCCACCCCCTTCATTCTCATGAAAAAGGCTACTTAATAGTGACTTTGGAGATAATTATCATCTTAACTATAACTACACAAGAAAATGAACAAAACAATATGTGAATACTTGTAAATAACAACACACTACGTCAATTTAAGGTAAACATATATGGTAAAACAAGAAGTTAGATATTCGAATCTCCTTTCTTCATTTTTGTTAAATAATAATAATGATGATAATAATAGTAAACTACCGTCTACGGATATAAACAATTTAAAATTAATCAAATTGGAGTGTTTATGCGGTCAAATCTACTTAGGATTTAATAAATGCATTGTTTGTGAAGTATGTTTTTGTGTATATTCTATAGATCACCTCATTGTTAATTAGAAATTGAAAACATATATTCATAAGAAATAATTGTTTTACTACAATATTGAATTTTTTCTAATAAATTATTTATCAACGATTGAAAAATATGAACTTGATTAAACTTTGATTTCAGGGAACAAAAGTGTGAAGTTGAAATAACTTACTCAAAATATTTTTTCAAAGAATACATGGTATGATTAGATCAAAGAAGGAAATAATTTTACAGAATGTCGCTTTATAGGGGCTCAAATGAAAAATAACTCCAAATTTTAAAAGCAAGAAATTTGACTTTTTGTTGATGTCATTATCTTGTGAAATTACCATTTTAACCTTTCTTTCTACTTTCTTCTACCTTAGTCATTTTGCAGTCTTTTTCAATTTTTTTTCTTTTTTCTTCTTCTTCTTCTTTTTTATTTTTTTTGTATCTCCTTCCGTTTCTTTTTTGTGCGTTTCTTCTTCCAGGCTTCGACCCACTTCGTTGAAATTTACACAGTTGCCCTCTTTTTTAGCGATTTCTTCTCTTCATGCCGCCACCTTGTTCTTCTTTTAGAATAAAAAATGTAAGTTGGAGCGTGAATCATAATGAGAGTGAAACCAAGGAACAAGAGGAAGAAGCGAGAGGAAGAATTCGAATGAAGTAAAAAAACTACAAAATTGATGAGAAAGAAGCTAGAGGAAGAAGTGAGGGGAAGAAACTAAAGGAAGAATTCAAGCGAAGGAAAAAAATCAAAAAAAAAATTGCAGTTGCGTCTGATAAAGAACGAGAGGACGAAATGAGGAGTGAAAGGAAGAAACGAGAATTCCTTTGAGCGTTAGGCCCTCGCGCGCGATCTGGAACAAAATGGTACTTTCACACGAGGCTGACGTAAGCAAAAGGCCATTTTTCGACCAAGTTTAAATCTTTGGCCAAATTACATATGGGCCCCTAAAAAGGGGTCATCTGTACGAAAACCCTATCAAAGAACCCCTTAATGAATAAATATTCCACCGTATGTGAACTCTCAGAGGCTATCTTGTTCAATGCTTGAGGCATGATGAGGATATTAAGGATGTGTCAACCTAATTGAGATATCTTGGTGGCTTCTATTAATCCCCTCTTATCCTGTATATTGTTAAAAAAAAATCCGTTCAATGCTTGTTCAACTACTCTTTTACATGCAAACGCTATCTAAGCAATGAGTTCAACGATTACGAGATCTCCTAACTTACTAAAACTAGTTGTCACCGACATATCAATCAATTTGACAATAATGAAAAAATGACTATATATTAATTCATCCTCATCTTTCTACAAGTACATGTTTTCATGCATATCAATCTATTATTATGACAAAAAGATAGGTTTGAAGGAAATTAAATCAATAAAGTATATTATTTCAAAAATAAATAAATAAAATAAAAATCATCAACGTATAATATTGTACGCTTTATTGACCTGTTTAGAAAAATTTCTTATACGTTATGAAAACTGACAATGGCATTAAGAAACTGAAGAAATTTAGAACTACTCCAAAAATGGAGGCCATAGACATTGATTCCATGGTGAATACATCTGAAAAGAGAGCCAGATGCATTGTTGAAAATTTTGAATCAGTTTTTTCTTTCTTTTAGTAATATGATTAAAATATCGAGATTTAAATTTATGAATATATCATCGGATATTTCTATAAGTAAAAAAAAATTATAAAATTTATTTAGTTTGATAATTAAATTATTTTTACTCTCAAACTAAGTTATAGATATTGTTATCAGTATTTTAAATCATATTGAATTAAATAGAGGACATCTTTTTATGTTTTATGAGCATTTCTAAAATATATCAAATATATTAGTAGATATTTAATATCGATGTCGAACCCTTCAATTTATGGATATATCAACATGGATATATCAACATGTCGATGGATATTTTCAACATTATATGCATCTTCTACAATTATATATAAGAAAAAGTTTGTCACGTGCTAACTTGTGATTTGAACACTTTATGCATGGAGTGAAATGCAACTAATTATTTTTCTTTTTTTTCTATTTCCTTTTATGTGATAATATCAAACACCGGTTGCTGTTGTAAAGAAACTTAAGCCGCTGATACATTGCAATAAAAAAAATATAAATAGATTCGTCGTATTCTTTTACACACCTTCCTTTGTAATGCTTTTATAAAAATAACAAATTATATAATTTTGTAAACAAATTTAATGAACCGATATGAATATCATATAACCTTATTGTTAGCCTATTTTTCTGTTTGTCTCATAGCCTTCCACTTGCAATAAGTTACTAAGATTTTATTCTTTTAAAAAAATAATAAATAAATAACACTAAAATTTTTCAAAGAAGAAACAAATCTACTAGGAAAAGAGTTGATTACTTAGGTATATACCATAATGATGATGTAACCTTTGAAACTTTTATTAGTTAAAATATAAAGGTGTGATTATAATATCTAATTGAAGGACAAAGCTCAACTCATTAACACAGATATCCTAAACCAAAATATCAAATATTTAAATTTCTGAAAGAAAAAAAAGAAGCATATCCACACTAGTTGAATTAAAAAAAAGGATATTTAATATTCATTAGGAAAAAGGAAGGGAAAAAACAGAGAAACATTCAACATTGAACATATTGCATCATCATTTTGTTATTATCCAACAATAATGTAAATTAAAATCAATTTCTTTTCAAAAAAGAAAAAACAATAATGTAAATTAAAAGATATATATCATTGGAAAATTTTTAACAAAAAAAAAAAAAAAACATTAAGAAGATGTTTGAGGTAAGGAATAGAATAGTAAGGAGTGGAGAGATATAAAGCCTGTGTAGTTATGAATTCTTAGGATCCACACGGTGTAAGGAGTTGAAAAGATGATAAGATATAAAATTGATGTTTTTAGTAGTAAGACCCACCAATTCTTTGGCCAAACATAGAGTGAAATTCACTCCATATTTCCATACTCCTACTTTCCAACTAAGACGACTATCTAAAAATTTTGCTATTGTGTGTAAATAGTTTCCCTTATTTTTCTATTTTTTAAAATTAAGAAAAGGCCAAGAAAAAAAAAAGATATTTTGTAATTGTAACAAAATCCGACCTTTGAACAGCACATAGGGCCAAGAATGGTGTTAATCAAGCAGGCCATATGCCAACATCCAACATGGGAAGCAATTATATTATAGTGACAGCCTCCACGACTTCACAAGTTGTGGAAGAATGA

mRNA sequence

ATGTTCATCACATCTGTTGTTCCATCAGGTCTAATGTGTGAAGGACGTGAGCAAATACAAGAAGCTCTAGCTGCTTATATTAATGCTCTCCTACTCGAACCATGCTATGTTCCTTGCAAGGTTTTGATTGGTGCTCTTTGGTCGAAAGCGGGCCCAGATGCATTGCCTATAGCAAGAAGCTTACTTTCAGACGCATTGAGATTAGATCCCACCAACCGTAAGGCTTGGTTTTACTTAGGGGTCATTCATAGGGACGAAGGACGAATGGCCGACGCCATAGACTGTTTCCAGGCAGCCGCTATGCTTGAAGAAACAGATCCCATTGAAAGCTTCAGCAGTCGATCACGTCAAGCTGGCTATGCAATGGTCACAGGAGATGCATATGTTTCACTTTTTTCGAAGCCGAAAAGAAGGCATCTGGCGAAATGTGAAGAACTATGCTCACATAGGGCCAAGAATGGTGTTAATCAAGCAGGCCATATGCCAACATCCAACATGGGAAGCAATTATATTATAGTGACAGCCTCCACGACTTCACAAGTTGTGGAAGAATGA

Coding sequence (CDS)

ATGTTCATCACATCTGTTGTTCCATCAGGTCTAATGTGTGAAGGACGTGAGCAAATACAAGAAGCTCTAGCTGCTTATATTAATGCTCTCCTACTCGAACCATGCTATGTTCCTTGCAAGGTTTTGATTGGTGCTCTTTGGTCGAAAGCGGGCCCAGATGCATTGCCTATAGCAAGAAGCTTACTTTCAGACGCATTGAGATTAGATCCCACCAACCGTAAGGCTTGGTTTTACTTAGGGGTCATTCATAGGGACGAAGGACGAATGGCCGACGCCATAGACTGTTTCCAGGCAGCCGCTATGCTTGAAGAAACAGATCCCATTGAAAGCTTCAGCAGTCGATCACGTCAAGCTGGCTATGCAATGGTCACAGGAGATGCATATGTTTCACTTTTTTCGAAGCCGAAAAGAAGGCATCTGGCGAAATGTGAAGAACTATGCTCACATAGGGCCAAGAATGGTGTTAATCAAGCAGGCCATATGCCAACATCCAACATGGGAAGCAATTATATTATAGTGACAGCCTCCACGACTTCACAAGTTGTGGAAGAATGA

Protein sequence

MFITSVVPSGLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIESFSSRSRQAGYAMVTGDAYVSLFSKPKRRHLAKCEELCSHRAKNGVNQAGHMPTSNMGSNYIIVTASTTSQVVEE

Homology

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BLAST of HG10013813 vs. NCBI nr
Match: XP_038898884.1 (protein NPG1 [Benincasa hispida])

HSP 1 Score: 207.6 bits (527), Expect = 9.1e-50
Identity = 101/104 (97.12%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 10  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLD 69
           GLMCEGRE+IQEALAAYINALLLEP YVPCKVLIGALWSKAGPDALPIARSLLSDALRLD
Sbjct: 603 GLMCEGREKIQEALAAYINALLLEPSYVPCKVLIGALWSKAGPDALPIARSLLSDALRLD 662

Query: 70  PTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIESFSS 114
           PTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEE+DPIESFSS
Sbjct: 663 PTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEESDPIESFSS 706

[Close]

BLAST of HG10013813 vs. NCBI nr
Match: XP_008464649.1 (PREDICTED: tetratricopeptide repeat protein 7B isoform X1 [Cucumis melo] >XP_016903237.1 PREDICTED: tetratricopeptide repeat protein 7B isoform X2 [Cucumis melo] >TYK28045.1 tetratricopeptide repeat protein 7B isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 207.6 bits (527), Expect = 9.1e-50
Identity = 101/104 (97.12%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 10  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLD 69
           GLMCEGRE+IQEALAAYINALLLEP YVPCKVLIGALWSKAGPDALPIARSLLSDALRLD
Sbjct: 603 GLMCEGREKIQEALAAYINALLLEPTYVPCKVLIGALWSKAGPDALPIARSLLSDALRLD 662

Query: 70  PTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIESFSS 114
           PTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEE+DPIESFSS
Sbjct: 663 PTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEESDPIESFSS 706

[Close]

BLAST of HG10013813 vs. NCBI nr
Match: KAA0063345.1 (tetratricopeptide repeat protein 7B isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 204.9 bits (520), Expect = 5.9e-49
Identity = 100/103 (97.09%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 11  LMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDP 70
           LMCEGRE+IQEALAAYINALLLEP YVPCKVLIGALWSKAGPDALPIARSLLSDALRLDP
Sbjct: 613 LMCEGREKIQEALAAYINALLLEPTYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDP 672

Query: 71  TNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIESFSS 114
           TNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEE+DPIESFSS
Sbjct: 673 TNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEESDPIESFSS 715

[Close]

BLAST of HG10013813 vs. NCBI nr
Match: XP_004149521.1 (protein NPG1 [Cucumis sativus] >KGN54956.1 hypothetical protein Csa_012422 [Cucumis sativus])

HSP 1 Score: 204.9 bits (520), Expect = 5.9e-49
Identity = 100/104 (96.15%), Postives = 102/104 (98.08%), Query Frame = 0


Query: 10  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLD 69
           GLMCEGR +IQEALAAYINALLLEP YVPCKVLIGALWSKAGPDALPIARSLLSDALRLD
Sbjct: 603 GLMCEGRVKIQEALAAYINALLLEPTYVPCKVLIGALWSKAGPDALPIARSLLSDALRLD 662

Query: 70  PTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIESFSS 114
           PTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEE+DPIESFSS
Sbjct: 663 PTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEESDPIESFSS 706

[Close]

BLAST of HG10013813 vs. NCBI nr
Match: XP_022936043.1 (protein NPG1-like [Cucurbita moschata])

HSP 1 Score: 204.1 bits (518), Expect = 1.0e-48
Identity = 98/104 (94.23%), Postives = 102/104 (98.08%), Query Frame = 0


Query: 10  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLD 69
           GLMCEG E+IQEALAAYINA+LLEP YVPCKVLIGALWSKAGPDALPIARSLLSDALRLD
Sbjct: 602 GLMCEGSEKIQEALAAYINAILLEPTYVPCKVLIGALWSKAGPDALPIARSLLSDALRLD 661

Query: 70  PTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIESFSS 114
           PTNRKAWFYLGVIHRDEGRMADA+DCFQAAAMLEE+DPIESFSS
Sbjct: 662 PTNRKAWFYLGVIHRDEGRMADAVDCFQAAAMLEESDPIESFSS 705

[Close]

BLAST of HG10013813 vs. ExPASy Swiss-Prot
Match: Q8GZN1 (Protein NPG1 OS=Arabidopsis thaliana OX=3702 GN=NPG1 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 5.6e-34
Identity = 69/107 (64.49%), Postives = 89/107 (83.18%), Query Frame = 0


Query: 10  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPD---ALPIARSLLSDAL 69
           G M EGR++ + ALAA+++ LLL+   VPCKV +GAL S+ G D    LP+ARSLLSDAL
Sbjct: 596 GRMWEGRKEFKPALAAFLDGLLLDGSSVPCKVAVGALLSERGKDHQPTLPVARSLLSDAL 655

Query: 70  RLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIESFSS 114
           R+DPTNRKAW+YLG++H+ +GR+ADA DCFQAA+MLEE+DPIESFS+
Sbjct: 656 RIDPTNRKAWYYLGMVHKSDGRIADATDCFQAASMLEESDPIESFST 702

[Close]

BLAST of HG10013813 vs. ExPASy Swiss-Prot
Match: Q9CB03 (Protein NPGR1 OS=Arabidopsis thaliana OX=3702 GN=NPGR1 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.9e-14
Identity = 41/103 (39.81%), Postives = 63/103 (61.17%), Query Frame = 0


Query: 9   SGLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRL 68
           +GL  E +   +EAL ++  +L +EP +VP  V I  +  K+G ++LP A+S L +ALRL
Sbjct: 591 TGLCLEAKSLHEEALISFFLSLSIEPDHVPSIVSIAEVMMKSGDESLPTAKSFLMNALRL 650

Query: 69  DPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIESF 112
           DP N  AW  LG + + +G    A + +QAA  LE + P++SF
Sbjct: 651 DPRNHDAWMKLGHVAKKQGLSQQAAEFYQAAYELELSAPVQSF 693

[Close]

BLAST of HG10013813 vs. ExPASy Swiss-Prot
Match: Q66GN3 (Protein NPGR2 OS=Arabidopsis thaliana OX=3702 GN=NPGR2 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.4e-13
Identity = 40/106 (37.74%), Postives = 62/106 (58.49%), Query Frame = 0


Query: 10  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAG-PDALPIARSLLSDALRL 69
           G++   R Q++EA+ A+  AL ++P +VP       +  + G    + + RS L +ALR+
Sbjct: 633 GVLYNRRGQLEEAMEAFTTALDIDPMHVPSLTSKAEILLEVGNRSGIAVVRSFLMEALRI 692

Query: 70  DPTNRKAWFYLGVIHRDEG---RMADAIDCFQAAAMLEETDPIESF 112
           D  N  AW+ LG + + EG    M +A++CFQAA  LEET P+E F
Sbjct: 693 DRLNHSAWYNLGKMFKAEGSVSSMQEAVECFQAAVTLEETMPVEPF 738

[Close]

BLAST of HG10013813 vs. ExPASy Swiss-Prot
Match: Q8BGB2 (Tetratricopeptide repeat protein 7A OS=Mus musculus OX=10090 GN=Ttc7a PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.4e-07
Identity = 35/108 (32.41%), Postives = 56/108 (51.85%), Query Frame = 0


Query: 10  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLD 69
           G + E +   +EA   Y  AL + P  V     +G + S+ G  +L  A+ +L DA+   
Sbjct: 752 GRLAEVKGSFEEAKQLYKEALTVNPDGVRIMHSLGLMLSQLGHKSL--AQKVLRDAVERQ 811

Query: 70  PTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIESFSSRSRQ 118
            T  +AW  LG + +D+G+   A+DCF  A  LE + P+  FS  +R+
Sbjct: 812 STFHEAWQGLGEVLQDQGQNEAAVDCFLTALELEASSPVLPFSIIARE 857

[Close]

BLAST of HG10013813 vs. ExPASy Swiss-Prot
Match: Q9ULT0 (Tetratricopeptide repeat protein 7A OS=Homo sapiens OX=9606 GN=TTC7A PE=1 SV=3)

HSP 1 Score: 53.9 bits (128), Expect = 2.2e-06
Identity = 34/108 (31.48%), Postives = 55/108 (50.93%), Query Frame = 0


Query: 10  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLD 69
           G + E +  ++EA   Y  AL + P  V     +G + S+ G  +L  A+ +L DA+   
Sbjct: 752 GRLAEVKGNLEEAKQLYKEALTVNPDGVRIMHSLGLMLSRLGHKSL--AQKVLRDAVERQ 811

Query: 70  PTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIESFSSRSRQ 118
            T  +AW  LG + + +G+   A+DCF  A  LE + P+  FS   R+
Sbjct: 812 STCHEAWQGLGEVLQAQGQNEAAVDCFLTALELEASSPVLPFSIIPRE 857

[Close]

BLAST of HG10013813 vs. ExPASy TrEMBL
Match: A0A1S4E4T9 (tetratricopeptide repeat protein 7B isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502486 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 4.4e-50
Identity = 101/104 (97.12%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 10  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLD 69
           GLMCEGRE+IQEALAAYINALLLEP YVPCKVLIGALWSKAGPDALPIARSLLSDALRLD
Sbjct: 603 GLMCEGREKIQEALAAYINALLLEPTYVPCKVLIGALWSKAGPDALPIARSLLSDALRLD 662

Query: 70  PTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIESFSS 114
           PTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEE+DPIESFSS
Sbjct: 663 PTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEESDPIESFSS 706

[Close]

BLAST of HG10013813 vs. ExPASy TrEMBL
Match: A0A5D3DXI7 (Tetratricopeptide repeat protein 7B isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003040 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 4.4e-50
Identity = 101/104 (97.12%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 10  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLD 69
           GLMCEGRE+IQEALAAYINALLLEP YVPCKVLIGALWSKAGPDALPIARSLLSDALRLD
Sbjct: 603 GLMCEGREKIQEALAAYINALLLEPTYVPCKVLIGALWSKAGPDALPIARSLLSDALRLD 662

Query: 70  PTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIESFSS 114
           PTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEE+DPIESFSS
Sbjct: 663 PTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEESDPIESFSS 706

[Close]

BLAST of HG10013813 vs. ExPASy TrEMBL
Match: A0A5A7VBS0 (Tetratricopeptide repeat protein 7B isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1505G00150 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 2.9e-49
Identity = 100/103 (97.09%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 11  LMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDP 70
           LMCEGRE+IQEALAAYINALLLEP YVPCKVLIGALWSKAGPDALPIARSLLSDALRLDP
Sbjct: 613 LMCEGREKIQEALAAYINALLLEPTYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDP 672

Query: 71  TNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIESFSS 114
           TNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEE+DPIESFSS
Sbjct: 673 TNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEESDPIESFSS 715

[Close]

BLAST of HG10013813 vs. ExPASy TrEMBL
Match: A0A0A0L499 (O-linked n-acetylglucosamine transferase, ogt OS=Cucumis sativus OX=3659 GN=Csa_4G615760 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 2.9e-49
Identity = 100/104 (96.15%), Postives = 102/104 (98.08%), Query Frame = 0


Query: 10  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLD 69
           GLMCEGR +IQEALAAYINALLLEP YVPCKVLIGALWSKAGPDALPIARSLLSDALRLD
Sbjct: 603 GLMCEGRVKIQEALAAYINALLLEPTYVPCKVLIGALWSKAGPDALPIARSLLSDALRLD 662

Query: 70  PTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIESFSS 114
           PTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEE+DPIESFSS
Sbjct: 663 PTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEESDPIESFSS 706

[Close]

BLAST of HG10013813 vs. ExPASy TrEMBL
Match: A0A6J1IHN6 (protein NPG1-like OS=Cucurbita maxima OX=3661 GN=LOC111477020 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 4.9e-49
Identity = 98/104 (94.23%), Postives = 102/104 (98.08%), Query Frame = 0


Query: 10  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLD 69
           GLMCEG E+IQEALAAYINA+LLEP YVPCKVLIGALWSKAGPDALPIARSLLSDALRLD
Sbjct: 602 GLMCEGSEKIQEALAAYINAILLEPTYVPCKVLIGALWSKAGPDALPIARSLLSDALRLD 661

Query: 70  PTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIESFSS 114
           PTNRKAWFYLGVIHRDEGRMADA+DCFQAAAMLEE+DPIESFSS
Sbjct: 662 PTNRKAWFYLGVIHRDEGRMADAVDCFQAAAMLEESDPIESFSS 705

[Close]

BLAST of HG10013813 vs. TAIR 10
Match: AT2G43040.1 (tetratricopeptide repeat (TPR)-containing protein )

HSP 1 Score: 145.6 bits (366), Expect = 4.0e-35
Identity = 69/107 (64.49%), Postives = 89/107 (83.18%), Query Frame = 0


Query: 10  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPD---ALPIARSLLSDAL 69
           G M EGR++ + ALAA+++ LLL+   VPCKV +GAL S+ G D    LP+ARSLLSDAL
Sbjct: 596 GRMWEGRKEFKPALAAFLDGLLLDGSSVPCKVAVGALLSERGKDHQPTLPVARSLLSDAL 655

Query: 70  RLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIESFSS 114
           R+DPTNRKAW+YLG++H+ +GR+ADA DCFQAA+MLEE+DPIESFS+
Sbjct: 656 RIDPTNRKAWYYLGMVHKSDGRIADATDCFQAASMLEESDPIESFST 702

[Close]

BLAST of HG10013813 vs. TAIR 10
Match: AT1G27460.1 (no pollen germination related 1 )

HSP 1 Score: 80.1 bits (196), Expect = 2.0e-15
Identity = 41/103 (39.81%), Postives = 63/103 (61.17%), Query Frame = 0


Query: 9   SGLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRL 68
           +GL  E +   +EAL ++  +L +EP +VP  V I  +  K+G ++LP A+S L +ALRL
Sbjct: 591 TGLCLEAKSLHEEALISFFLSLSIEPDHVPSIVSIAEVMMKSGDESLPTAKSFLMNALRL 650

Query: 69  DPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIESF 112
           DP N  AW  LG + + +G    A + +QAA  LE + P++SF
Sbjct: 651 DPRNHDAWMKLGHVAKKQGLSQQAAEFYQAAYELELSAPVQSF 693

[Close]

BLAST of HG10013813 vs. TAIR 10
Match: AT4G28600.1 (no pollen germination related 2 )

HSP 1 Score: 75.9 bits (185), Expect = 3.9e-14
Identity = 40/106 (37.74%), Postives = 62/106 (58.49%), Query Frame = 0


Query: 10  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAG-PDALPIARSLLSDALRL 69
           G++   R Q++EA+ A+  AL ++P +VP       +  + G    + + RS L +ALR+
Sbjct: 633 GVLYNRRGQLEEAMEAFTTALDIDPMHVPSLTSKAEILLEVGNRSGIAVVRSFLMEALRI 692

Query: 70  DPTNRKAWFYLGVIHRDEG---RMADAIDCFQAAAMLEETDPIESF 112
           D  N  AW+ LG + + EG    M +A++CFQAA  LEET P+E F
Sbjct: 693 DRLNHSAWYNLGKMFKAEGSVSSMQEAVECFQAAVTLEETMPVEPF 738

[Close]

BLAST of HG10013813 vs. TAIR 10
Match: AT3G11540.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 44.7 bits (104), Expect = 9.5e-05
Identity = 18/47 (38.30%), Postives = 31/47 (65.96%), Query Frame = 0


Query: 57  IARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLE 104
           +A    S+A+RLDP N  A  + G++H++EGR+ +A + +Q A M +
Sbjct: 95  LAFDCFSEAIRLDPHNACALTHCGILHKEEGRLVEAAESYQKALMAD 141

[Close]

BLAST of HG10013813 vs. TAIR 10
Match: AT3G11540.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 44.7 bits (104), Expect = 9.5e-05
Identity = 18/47 (38.30%), Postives = 31/47 (65.96%), Query Frame = 0


Query: 57  IARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLE 104
           +A    S+A+RLDP N  A  + G++H++EGR+ +A + +Q A M +
Sbjct: 95  LAFDCFSEAIRLDPHNACALTHCGILHKEEGRLVEAAESYQKALMAD 141

The following BLAST results are available for this feature:

BLAST of HG10013813 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898884.1	9.1e-50	97.12	protein NPG1 [Benincasa hispida]	[more]
XP_008464649.1	9.1e-50	97.12	PREDICTED: tetratricopeptide repeat protein 7B isoform X1 [Cucumis melo] >XP_016...	[more]
KAA0063345.1	5.9e-49	97.09	tetratricopeptide repeat protein 7B isoform X1 [Cucumis melo var. makuwa]	[more]
XP_004149521.1	5.9e-49	96.15	protein NPG1 [Cucumis sativus] >KGN54956.1 hypothetical protein Csa_012422 [Cucu...	[more]
XP_022936043.1	1.0e-48	94.23	protein NPG1-like [Cucurbita moschata]	[more]

BLAST of HG10013813 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GZN1	5.6e-34	64.49	Protein NPG1 OS=Arabidopsis thaliana OX=3702 GN=NPG1 PE=1 SV=1	[more]
Q9CB03	2.9e-14	39.81	Protein NPGR1 OS=Arabidopsis thaliana OX=3702 GN=NPGR1 PE=1 SV=1	[more]
Q66GN3	5.4e-13	37.74	Protein NPGR2 OS=Arabidopsis thaliana OX=3702 GN=NPGR2 PE=1 SV=1	[more]
Q8BGB2	3.4e-07	32.41	Tetratricopeptide repeat protein 7A OS=Mus musculus OX=10090 GN=Ttc7a PE=1 SV=1	[more]
Q9ULT0	2.2e-06	31.48	Tetratricopeptide repeat protein 7A OS=Homo sapiens OX=9606 GN=TTC7A PE=1 SV=3	[more]

BLAST of HG10013813 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E4T9	4.4e-50	97.12	tetratricopeptide repeat protein 7B isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5D3DXI7	4.4e-50	97.12	Tetratricopeptide repeat protein 7B isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A5A7VBS0	2.9e-49	97.09	Tetratricopeptide repeat protein 7B isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A0A0L499	2.9e-49	96.15	O-linked n-acetylglucosamine transferase, ogt OS=Cucumis sativus OX=3659 GN=Csa_...	[more]
A0A6J1IHN6	4.9e-49	94.23	protein NPG1-like OS=Cucurbita maxima OX=3661 GN=LOC111477020 PE=4 SV=1	[more]

BLAST of HG10013813 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43040.1	4.0e-35	64.49	tetratricopeptide repeat (TPR)-containing protein	[more]
AT1G27460.1	2.0e-15	39.81	no pollen germination related 1	[more]
AT4G28600.1	3.9e-14	37.74	no pollen germination related 2	[more]
AT3G11540.1	9.5e-05	38.30	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G11540.2	9.5e-05	38.30	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 73..106 e-value: 0.0084 score: 25.3
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 73..106 score: 9.2634
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 9..144 e-value: 2.3E-12 score: 48.9
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 10..107
IPR013105	Tetratricopeptide repeat 2	PFAM	PF07719	TPR_2	coord: 74..106 e-value: 1.2E-5 score: 25.1
None	No IPR available	PANTHER	PTHR44102:SF5	PROTEIN NPG1	coord: 9..113
IPR043376	Protein NPG1-like	PANTHER	PTHR44102	PROTEIN NPG1	coord: 9..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10013813.1	HG10013813.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016740	transferase activity