Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTTGCAGTATTGGGAAGATGATGAAGAGAAGGAGAGACTGATCAAAGTGGTGGAGTATTTGGAGCCATTGATGTCCAAAGAGCTTCTTTGCAAATTCCCAGATAACTCCGCCTTCGATTTTGATTACTCTCAGAGCACCATCTGGTCTCCTTTGGTCCCTCGGCCTTACCATTCCATGGATTTGGATGTAATTACCCCCATCAAGCTTCCTTCTGATTTGGAAATGGCGGCGCAGGTCACGACGGCTGAGAAGAACAGCTTGAAGAAAGCCACCTCCAACCTCAAGAAGAAGTTTCTCTCCAATGGCTTCAGTATCGGTTTCAGCAATTCGAAAAGCAACAGGAAGATGAAGAGGATGAACAAGAAATTGGCGTCTGATTTCTCCCCCACGCCTGTACAAGGTGGTGCTTGCTATCCAAATAACAAAAAGGTCAGTTTGAAATCTTGA
mRNA sequence
ATGAATTTGCAGTATTGGGAAGATGATGAAGAGAAGGAGAGACTGATCAAAGTGGTGGAGTATTTGGAGCCATTGATGTCCAAAGAGCTTCTTTGCAAATTCCCAGATAACTCCGCCTTCGATTTTGATTACTCTCAGAGCACCATCTGGTCTCCTTTGGTCCCTCGGCCTTACCATTCCATGGATTTGGATGTAATTACCCCCATCAAGCTTCCTTCTGATTTGGAAATGGCGGCGCAGGTCACGACGGCTGAGAAGAACAGCTTGAAGAAAGCCACCTCCAACCTCAAGAAGAAGTTTCTCTCCAATGGCTTCAGTATCGGTTTCAGCAATTCGAAAAGCAACAGGAAGATGAAGAGGATGAACAAGAAATTGGCGTCTGATTTCTCCCCCACGCCTGTACAAGGTGGTGCTTGCTATCCAAATAACAAAAAGGTCAGTTTGAAATCTTGA
Coding sequence (CDS)
ATGAATTTGCAGTATTGGGAAGATGATGAAGAGAAGGAGAGACTGATCAAAGTGGTGGAGTATTTGGAGCCATTGATGTCCAAAGAGCTTCTTTGCAAATTCCCAGATAACTCCGCCTTCGATTTTGATTACTCTCAGAGCACCATCTGGTCTCCTTTGGTCCCTCGGCCTTACCATTCCATGGATTTGGATGTAATTACCCCCATCAAGCTTCCTTCTGATTTGGAAATGGCGGCGCAGGTCACGACGGCTGAGAAGAACAGCTTGAAGAAAGCCACCTCCAACCTCAAGAAGAAGTTTCTCTCCAATGGCTTCAGTATCGGTTTCAGCAATTCGAAAAGCAACAGGAAGATGAAGAGGATGAACAAGAAATTGGCGTCTGATTTCTCCCCCACGCCTGTACAAGGTGGTGCTTGCTATCCAAATAACAAAAAGGTCAGTTTGAAATCTTGA
Protein sequence
MNLQYWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHSMDLDVITPIKLPSDLEMAAQVTTAEKNSLKKATSNLKKKFLSNGFSIGFSNSKSNRKMKRMNKKLASDFSPTPVQGGACYPNNKKVSLKS
Homology
BLAST of HG10013774 vs. NCBI nr
Match:
XP_038898299.1 (uncharacterized protein LOC120085999 [Benincasa hispida])
HSP 1 Score: 244.6 bits (623), Expect = 5.5e-61
Identity = 127/146 (86.99%), Postives = 133/146 (91.10%), Query Frame = 0
Query: 1 MNLQYWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60
MNLQ EDDEE+ERLIKVVEYLEP MSK+LLCKFPDNSAFDF+YSQSTIWSPLVPRPYHS
Sbjct: 1 MNLQSREDDEERERLIKVVEYLEPFMSKQLLCKFPDNSAFDFNYSQSTIWSPLVPRPYHS 60
Query: 61 MDLDVITPIKLPSDLEMAAQVTTAEKNSLKKATSNLKKKFLSNGFSIGFSNSKSNRKMKR 120
MDLDVITPIKLPSD EMA + TTAEKNSL+KATSNLKKK L NGFSI F SKSNRKM R
Sbjct: 61 MDLDVITPIKLPSDFEMATE-TTAEKNSLRKATSNLKKKLLFNGFSISFGISKSNRKMNR 120
Query: 121 M-NKKLASDFSPTPVQGGACYPNNKK 146
M NKKLASDFSPTP+QGGACYPNNKK
Sbjct: 121 MKNKKLASDFSPTPLQGGACYPNNKK 145
BLAST of HG10013774 vs. NCBI nr
Match:
XP_023536350.1 (uncharacterized protein LOC111797546 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 244.2 bits (622), Expect = 7.2e-61
Identity = 124/146 (84.93%), Postives = 132/146 (90.41%), Query Frame = 0
Query: 1 MNLQYWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60
MN++ WEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS
Sbjct: 1 MNMRPWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60
Query: 61 MDLDVITPIKLPSDLEMAAQVTTAEKNSLKKATSNLKKKFLSNGFSIGFSNSKSNRKMKR 120
MDLD+ITPIKLPSD EMAA TT EKNSLKKATSNLKKK LSNG SI F SKSNRKMK+
Sbjct: 61 MDLDLITPIKLPSDSEMAASSTTVEKNSLKKATSNLKKKLLSNGVSIRFGISKSNRKMKK 120
Query: 121 M-NKKLASDFSPTPVQGGACYPNNKK 146
M NKK+A+DFSP P+Q ACYP+NKK
Sbjct: 121 MKNKKMAADFSPKPLQAAACYPHNKK 146
BLAST of HG10013774 vs. NCBI nr
Match:
KAG6591792.1 (hypothetical protein SDJN03_14138, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024669.1 hypothetical protein SDJN02_13487 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 243.0 bits (619), Expect = 1.6e-60
Identity = 126/146 (86.30%), Postives = 133/146 (91.10%), Query Frame = 0
Query: 1 MNLQYWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60
MN++ WEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS
Sbjct: 1 MNMRSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60
Query: 61 MDLDVITPIKLPSDLEMAAQVTTAEKNSLKKATSNLKKKFLSNGFSIGFSNSKSNRKMKR 120
MDLD+ITPIKLPSD EMAA TTAEKNSLKKATSNLKKK LSNG SI F SKSNRKMK+
Sbjct: 61 MDLDLITPIKLPSDSEMAAS-TTAEKNSLKKATSNLKKKLLSNGVSIRFGISKSNRKMKK 120
Query: 121 M-NKKLASDFSPTPVQGGACYPNNKK 146
M NKKLA+DFSP P+Q ACYP+NKK
Sbjct: 121 MKNKKLAADFSPKPLQAAACYPHNKK 145
BLAST of HG10013774 vs. NCBI nr
Match:
XP_022976862.1 (uncharacterized protein LOC111477106 [Cucurbita maxima])
HSP 1 Score: 240.0 bits (611), Expect = 1.4e-59
Identity = 125/147 (85.03%), Postives = 133/147 (90.48%), Query Frame = 0
Query: 1 MNLQYWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60
MN++ WEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPY S
Sbjct: 1 MNMRSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYQS 60
Query: 61 MDLDVITPIKLPSDLEMAA-QVTTAEKNSLKKATSNLKKKFLSNGFSIGFSNSKSNRKMK 120
MDLD+ITPIKLPSD EMAA + TTAEKNSLKKATSNLKKK LSNG SI F SKSNRKMK
Sbjct: 61 MDLDLITPIKLPSDSEMAASEKTTAEKNSLKKATSNLKKKLLSNGVSIRFGISKSNRKMK 120
Query: 121 RM-NKKLASDFSPTPVQGGACYPNNKK 146
+M NKKLA+DFSP P+Q ACYP+NKK
Sbjct: 121 KMKNKKLAADFSPKPLQAAACYPHNKK 147
BLAST of HG10013774 vs. NCBI nr
Match:
XP_022936857.1 (uncharacterized protein LOC111443318 [Cucurbita moschata])
HSP 1 Score: 234.2 bits (596), Expect = 7.4e-58
Identity = 122/147 (82.99%), Postives = 132/147 (89.80%), Query Frame = 0
Query: 1 MNLQYWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60
MN++ WEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPY S
Sbjct: 1 MNMRSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYQS 60
Query: 61 MDLDVITPIKLPSDLEM-AAQVTTAEKNSLKKATSNLKKKFLSNGFSIGFSNSKSNRKMK 120
MDLD+ITPIKLPSD EM A++ T AEKNSLK+ATSNLKKK LSNG SI F SKSNRKMK
Sbjct: 61 MDLDLITPIKLPSDSEMVASEKTMAEKNSLKEATSNLKKKLLSNGVSIRFGISKSNRKMK 120
Query: 121 RM-NKKLASDFSPTPVQGGACYPNNKK 146
+M NKKLA+DFSP P+Q ACYP+NKK
Sbjct: 121 KMKNKKLAADFSPKPLQPAACYPHNKK 147
BLAST of HG10013774 vs. ExPASy TrEMBL
Match:
A0A6J1IGW0 (uncharacterized protein LOC111477106 OS=Cucurbita maxima OX=3661 GN=LOC111477106 PE=4 SV=1)
HSP 1 Score: 240.0 bits (611), Expect = 6.5e-60
Identity = 125/147 (85.03%), Postives = 133/147 (90.48%), Query Frame = 0
Query: 1 MNLQYWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60
MN++ WEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPY S
Sbjct: 1 MNMRSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYQS 60
Query: 61 MDLDVITPIKLPSDLEMAA-QVTTAEKNSLKKATSNLKKKFLSNGFSIGFSNSKSNRKMK 120
MDLD+ITPIKLPSD EMAA + TTAEKNSLKKATSNLKKK LSNG SI F SKSNRKMK
Sbjct: 61 MDLDLITPIKLPSDSEMAASEKTTAEKNSLKKATSNLKKKLLSNGVSIRFGISKSNRKMK 120
Query: 121 RM-NKKLASDFSPTPVQGGACYPNNKK 146
+M NKKLA+DFSP P+Q ACYP+NKK
Sbjct: 121 KMKNKKLAADFSPKPLQAAACYPHNKK 147
BLAST of HG10013774 vs. ExPASy TrEMBL
Match:
A0A6J1F9I6 (uncharacterized protein LOC111443318 OS=Cucurbita moschata OX=3662 GN=LOC111443318 PE=4 SV=1)
HSP 1 Score: 234.2 bits (596), Expect = 3.6e-58
Identity = 122/147 (82.99%), Postives = 132/147 (89.80%), Query Frame = 0
Query: 1 MNLQYWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60
MN++ WEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPY S
Sbjct: 1 MNMRSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYQS 60
Query: 61 MDLDVITPIKLPSDLEM-AAQVTTAEKNSLKKATSNLKKKFLSNGFSIGFSNSKSNRKMK 120
MDLD+ITPIKLPSD EM A++ T AEKNSLK+ATSNLKKK LSNG SI F SKSNRKMK
Sbjct: 61 MDLDLITPIKLPSDSEMVASEKTMAEKNSLKEATSNLKKKLLSNGVSIRFGISKSNRKMK 120
Query: 121 RM-NKKLASDFSPTPVQGGACYPNNKK 146
+M NKKLA+DFSP P+Q ACYP+NKK
Sbjct: 121 KMKNKKLAADFSPKPLQPAACYPHNKK 147
BLAST of HG10013774 vs. ExPASy TrEMBL
Match:
A0A0A0L354 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G620590 PE=4 SV=1)
HSP 1 Score: 232.6 bits (592), Expect = 1.0e-57
Identity = 122/145 (84.14%), Postives = 126/145 (86.90%), Query Frame = 0
Query: 1 MNLQYWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60
MNLQ WEDDEE ERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPY+S
Sbjct: 1 MNLQSWEDDEE-ERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNS 60
Query: 61 MDLDVITPIKLPSDLEMAAQVTTAEKNSLKKATSNLKKKFLSNGFSIGFSNSKSNRKMKR 120
MDLDVITPIKLPSD E A A KNS KKATSNL+KKFL NGFS+ F SKS RKMK
Sbjct: 61 MDLDVITPIKLPSDFENAPVTAMAGKNSFKKATSNLRKKFLYNGFSVCFGISKSYRKMK- 120
Query: 121 MNKKLASDFSPTPVQGGACYPNNKK 146
NKKL SDFSPTP+QGGACYPNNKK
Sbjct: 121 -NKKLVSDFSPTPIQGGACYPNNKK 142
BLAST of HG10013774 vs. ExPASy TrEMBL
Match:
A0A5D3DWX3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G002690 PE=4 SV=1)
HSP 1 Score: 224.2 bits (570), Expect = 3.7e-55
Identity = 120/145 (82.76%), Postives = 124/145 (85.52%), Query Frame = 0
Query: 1 MNLQYWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60
MNLQ WEDDEE ERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPY+S
Sbjct: 1 MNLQSWEDDEE-ERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNS 60
Query: 61 MDLDVITPIKLPSDLEMAAQVTTAEKNSLKKATSNLKKKFLSNGFSIGFSNSKSNRKMKR 120
MDLDVITPIKLPSD AEKNS KKATSNLKKK LSN FSIGF SKS RKMK
Sbjct: 61 MDLDVITPIKLPSDF-----TRMAEKNSFKKATSNLKKKLLSNRFSIGFGISKSYRKMK- 120
Query: 121 MNKKLASDFSPTPVQGGACYPNNKK 146
N KL SDFSP+P++GGACYPNNKK
Sbjct: 121 -NNKLVSDFSPSPIRGGACYPNNKK 137
BLAST of HG10013774 vs. ExPASy TrEMBL
Match:
A0A5A7VHQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G002780 PE=4 SV=1)
HSP 1 Score: 222.6 bits (566), Expect = 1.1e-54
Identity = 119/145 (82.07%), Postives = 123/145 (84.83%), Query Frame = 0
Query: 1 MNLQYWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60
MNLQ WEDDEE ERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPY+S
Sbjct: 1 MNLQSWEDDEE-ERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNS 60
Query: 61 MDLDVITPIKLPSDLEMAAQVTTAEKNSLKKATSNLKKKFLSNGFSIGFSNSKSNRKMKR 120
MDLDVITPIKLPSD AEKNS KKATSNLKKK LSN F IGF SKS RKMK
Sbjct: 61 MDLDVITPIKLPSDF-----TRMAEKNSFKKATSNLKKKLLSNRFGIGFGISKSYRKMK- 120
Query: 121 MNKKLASDFSPTPVQGGACYPNNKK 146
N KL SDFSP+P++GGACYPNNKK
Sbjct: 121 -NNKLVSDFSPSPIRGGACYPNNKK 137
BLAST of HG10013774 vs. TAIR 10
Match:
AT4G15140.1 (unknown protein; Has 26 Blast hits to 26 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 83.2 bits (204), Expect = 2.0e-16
Identity = 42/63 (66.67%), Postives = 50/63 (79.37%), Query Frame = 0
Query: 7 EDDEEKER----LIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS-M 65
E++EEKE KVVEYL+P+M +ELLCKFPDNSAF FDYSQS++WSPL+PR Y S
Sbjct: 9 EEEEEKENYPLITTKVVEYLQPVMCRELLCKFPDNSAFGFDYSQSSLWSPLLPRNYASPS 68
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038898299.1 | 5.5e-61 | 86.99 | uncharacterized protein LOC120085999 [Benincasa hispida] | [more] |
XP_023536350.1 | 7.2e-61 | 84.93 | uncharacterized protein LOC111797546 [Cucurbita pepo subsp. pepo] | [more] |
KAG6591792.1 | 1.6e-60 | 86.30 | hypothetical protein SDJN03_14138, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022976862.1 | 1.4e-59 | 85.03 | uncharacterized protein LOC111477106 [Cucurbita maxima] | [more] |
XP_022936857.1 | 7.4e-58 | 82.99 | uncharacterized protein LOC111443318 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1IGW0 | 6.5e-60 | 85.03 | uncharacterized protein LOC111477106 OS=Cucurbita maxima OX=3661 GN=LOC111477106... | [more] |
A0A6J1F9I6 | 3.6e-58 | 82.99 | uncharacterized protein LOC111443318 OS=Cucurbita moschata OX=3662 GN=LOC1114433... | [more] |
A0A0A0L354 | 1.0e-57 | 84.14 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G620590 PE=4 SV=1 | [more] |
A0A5D3DWX3 | 3.7e-55 | 82.76 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7VHQ6 | 1.1e-54 | 82.07 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
AT4G15140.1 | 2.0e-16 | 66.67 | unknown protein; Has 26 Blast hits to 26 proteins in 10 species: Archae - 0; Bac... | [more] |