HG10013774 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10013774
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC107416687
LocationChr02: 4610073 .. 4610525 (+)
RNA-Seq ExpressionHG10013774
SyntenyHG10013774
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTTGCAGTATTGGGAAGATGATGAAGAGAAGGAGAGACTGATCAAAGTGGTGGAGTATTTGGAGCCATTGATGTCCAAAGAGCTTCTTTGCAAATTCCCAGATAACTCCGCCTTCGATTTTGATTACTCTCAGAGCACCATCTGGTCTCCTTTGGTCCCTCGGCCTTACCATTCCATGGATTTGGATGTAATTACCCCCATCAAGCTTCCTTCTGATTTGGAAATGGCGGCGCAGGTCACGACGGCTGAGAAGAACAGCTTGAAGAAAGCCACCTCCAACCTCAAGAAGAAGTTTCTCTCCAATGGCTTCAGTATCGGTTTCAGCAATTCGAAAAGCAACAGGAAGATGAAGAGGATGAACAAGAAATTGGCGTCTGATTTCTCCCCCACGCCTGTACAAGGTGGTGCTTGCTATCCAAATAACAAAAAGGTCAGTTTGAAATCTTGA

mRNA sequence

ATGAATTTGCAGTATTGGGAAGATGATGAAGAGAAGGAGAGACTGATCAAAGTGGTGGAGTATTTGGAGCCATTGATGTCCAAAGAGCTTCTTTGCAAATTCCCAGATAACTCCGCCTTCGATTTTGATTACTCTCAGAGCACCATCTGGTCTCCTTTGGTCCCTCGGCCTTACCATTCCATGGATTTGGATGTAATTACCCCCATCAAGCTTCCTTCTGATTTGGAAATGGCGGCGCAGGTCACGACGGCTGAGAAGAACAGCTTGAAGAAAGCCACCTCCAACCTCAAGAAGAAGTTTCTCTCCAATGGCTTCAGTATCGGTTTCAGCAATTCGAAAAGCAACAGGAAGATGAAGAGGATGAACAAGAAATTGGCGTCTGATTTCTCCCCCACGCCTGTACAAGGTGGTGCTTGCTATCCAAATAACAAAAAGGTCAGTTTGAAATCTTGA

Coding sequence (CDS)

ATGAATTTGCAGTATTGGGAAGATGATGAAGAGAAGGAGAGACTGATCAAAGTGGTGGAGTATTTGGAGCCATTGATGTCCAAAGAGCTTCTTTGCAAATTCCCAGATAACTCCGCCTTCGATTTTGATTACTCTCAGAGCACCATCTGGTCTCCTTTGGTCCCTCGGCCTTACCATTCCATGGATTTGGATGTAATTACCCCCATCAAGCTTCCTTCTGATTTGGAAATGGCGGCGCAGGTCACGACGGCTGAGAAGAACAGCTTGAAGAAAGCCACCTCCAACCTCAAGAAGAAGTTTCTCTCCAATGGCTTCAGTATCGGTTTCAGCAATTCGAAAAGCAACAGGAAGATGAAGAGGATGAACAAGAAATTGGCGTCTGATTTCTCCCCCACGCCTGTACAAGGTGGTGCTTGCTATCCAAATAACAAAAAGGTCAGTTTGAAATCTTGA

Protein sequence

MNLQYWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHSMDLDVITPIKLPSDLEMAAQVTTAEKNSLKKATSNLKKKFLSNGFSIGFSNSKSNRKMKRMNKKLASDFSPTPVQGGACYPNNKKVSLKS
Homology
BLAST of HG10013774 vs. NCBI nr
Match: XP_038898299.1 (uncharacterized protein LOC120085999 [Benincasa hispida])

HSP 1 Score: 244.6 bits (623), Expect = 5.5e-61
Identity = 127/146 (86.99%), Postives = 133/146 (91.10%), Query Frame = 0

Query: 1   MNLQYWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60
           MNLQ  EDDEE+ERLIKVVEYLEP MSK+LLCKFPDNSAFDF+YSQSTIWSPLVPRPYHS
Sbjct: 1   MNLQSREDDEERERLIKVVEYLEPFMSKQLLCKFPDNSAFDFNYSQSTIWSPLVPRPYHS 60

Query: 61  MDLDVITPIKLPSDLEMAAQVTTAEKNSLKKATSNLKKKFLSNGFSIGFSNSKSNRKMKR 120
           MDLDVITPIKLPSD EMA + TTAEKNSL+KATSNLKKK L NGFSI F  SKSNRKM R
Sbjct: 61  MDLDVITPIKLPSDFEMATE-TTAEKNSLRKATSNLKKKLLFNGFSISFGISKSNRKMNR 120

Query: 121 M-NKKLASDFSPTPVQGGACYPNNKK 146
           M NKKLASDFSPTP+QGGACYPNNKK
Sbjct: 121 MKNKKLASDFSPTPLQGGACYPNNKK 145

BLAST of HG10013774 vs. NCBI nr
Match: XP_023536350.1 (uncharacterized protein LOC111797546 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 244.2 bits (622), Expect = 7.2e-61
Identity = 124/146 (84.93%), Postives = 132/146 (90.41%), Query Frame = 0

Query: 1   MNLQYWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60
           MN++ WEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS
Sbjct: 1   MNMRPWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60

Query: 61  MDLDVITPIKLPSDLEMAAQVTTAEKNSLKKATSNLKKKFLSNGFSIGFSNSKSNRKMKR 120
           MDLD+ITPIKLPSD EMAA  TT EKNSLKKATSNLKKK LSNG SI F  SKSNRKMK+
Sbjct: 61  MDLDLITPIKLPSDSEMAASSTTVEKNSLKKATSNLKKKLLSNGVSIRFGISKSNRKMKK 120

Query: 121 M-NKKLASDFSPTPVQGGACYPNNKK 146
           M NKK+A+DFSP P+Q  ACYP+NKK
Sbjct: 121 MKNKKMAADFSPKPLQAAACYPHNKK 146

BLAST of HG10013774 vs. NCBI nr
Match: KAG6591792.1 (hypothetical protein SDJN03_14138, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024669.1 hypothetical protein SDJN02_13487 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 243.0 bits (619), Expect = 1.6e-60
Identity = 126/146 (86.30%), Postives = 133/146 (91.10%), Query Frame = 0

Query: 1   MNLQYWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60
           MN++ WEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS
Sbjct: 1   MNMRSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60

Query: 61  MDLDVITPIKLPSDLEMAAQVTTAEKNSLKKATSNLKKKFLSNGFSIGFSNSKSNRKMKR 120
           MDLD+ITPIKLPSD EMAA  TTAEKNSLKKATSNLKKK LSNG SI F  SKSNRKMK+
Sbjct: 61  MDLDLITPIKLPSDSEMAAS-TTAEKNSLKKATSNLKKKLLSNGVSIRFGISKSNRKMKK 120

Query: 121 M-NKKLASDFSPTPVQGGACYPNNKK 146
           M NKKLA+DFSP P+Q  ACYP+NKK
Sbjct: 121 MKNKKLAADFSPKPLQAAACYPHNKK 145

BLAST of HG10013774 vs. NCBI nr
Match: XP_022976862.1 (uncharacterized protein LOC111477106 [Cucurbita maxima])

HSP 1 Score: 240.0 bits (611), Expect = 1.4e-59
Identity = 125/147 (85.03%), Postives = 133/147 (90.48%), Query Frame = 0

Query: 1   MNLQYWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60
           MN++ WEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPY S
Sbjct: 1   MNMRSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYQS 60

Query: 61  MDLDVITPIKLPSDLEMAA-QVTTAEKNSLKKATSNLKKKFLSNGFSIGFSNSKSNRKMK 120
           MDLD+ITPIKLPSD EMAA + TTAEKNSLKKATSNLKKK LSNG SI F  SKSNRKMK
Sbjct: 61  MDLDLITPIKLPSDSEMAASEKTTAEKNSLKKATSNLKKKLLSNGVSIRFGISKSNRKMK 120

Query: 121 RM-NKKLASDFSPTPVQGGACYPNNKK 146
           +M NKKLA+DFSP P+Q  ACYP+NKK
Sbjct: 121 KMKNKKLAADFSPKPLQAAACYPHNKK 147

BLAST of HG10013774 vs. NCBI nr
Match: XP_022936857.1 (uncharacterized protein LOC111443318 [Cucurbita moschata])

HSP 1 Score: 234.2 bits (596), Expect = 7.4e-58
Identity = 122/147 (82.99%), Postives = 132/147 (89.80%), Query Frame = 0

Query: 1   MNLQYWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60
           MN++ WEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPY S
Sbjct: 1   MNMRSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYQS 60

Query: 61  MDLDVITPIKLPSDLEM-AAQVTTAEKNSLKKATSNLKKKFLSNGFSIGFSNSKSNRKMK 120
           MDLD+ITPIKLPSD EM A++ T AEKNSLK+ATSNLKKK LSNG SI F  SKSNRKMK
Sbjct: 61  MDLDLITPIKLPSDSEMVASEKTMAEKNSLKEATSNLKKKLLSNGVSIRFGISKSNRKMK 120

Query: 121 RM-NKKLASDFSPTPVQGGACYPNNKK 146
           +M NKKLA+DFSP P+Q  ACYP+NKK
Sbjct: 121 KMKNKKLAADFSPKPLQPAACYPHNKK 147

BLAST of HG10013774 vs. ExPASy TrEMBL
Match: A0A6J1IGW0 (uncharacterized protein LOC111477106 OS=Cucurbita maxima OX=3661 GN=LOC111477106 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 6.5e-60
Identity = 125/147 (85.03%), Postives = 133/147 (90.48%), Query Frame = 0

Query: 1   MNLQYWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60
           MN++ WEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPY S
Sbjct: 1   MNMRSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYQS 60

Query: 61  MDLDVITPIKLPSDLEMAA-QVTTAEKNSLKKATSNLKKKFLSNGFSIGFSNSKSNRKMK 120
           MDLD+ITPIKLPSD EMAA + TTAEKNSLKKATSNLKKK LSNG SI F  SKSNRKMK
Sbjct: 61  MDLDLITPIKLPSDSEMAASEKTTAEKNSLKKATSNLKKKLLSNGVSIRFGISKSNRKMK 120

Query: 121 RM-NKKLASDFSPTPVQGGACYPNNKK 146
           +M NKKLA+DFSP P+Q  ACYP+NKK
Sbjct: 121 KMKNKKLAADFSPKPLQAAACYPHNKK 147

BLAST of HG10013774 vs. ExPASy TrEMBL
Match: A0A6J1F9I6 (uncharacterized protein LOC111443318 OS=Cucurbita moschata OX=3662 GN=LOC111443318 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 3.6e-58
Identity = 122/147 (82.99%), Postives = 132/147 (89.80%), Query Frame = 0

Query: 1   MNLQYWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60
           MN++ WEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPY S
Sbjct: 1   MNMRSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYQS 60

Query: 61  MDLDVITPIKLPSDLEM-AAQVTTAEKNSLKKATSNLKKKFLSNGFSIGFSNSKSNRKMK 120
           MDLD+ITPIKLPSD EM A++ T AEKNSLK+ATSNLKKK LSNG SI F  SKSNRKMK
Sbjct: 61  MDLDLITPIKLPSDSEMVASEKTMAEKNSLKEATSNLKKKLLSNGVSIRFGISKSNRKMK 120

Query: 121 RM-NKKLASDFSPTPVQGGACYPNNKK 146
           +M NKKLA+DFSP P+Q  ACYP+NKK
Sbjct: 121 KMKNKKLAADFSPKPLQPAACYPHNKK 147

BLAST of HG10013774 vs. ExPASy TrEMBL
Match: A0A0A0L354 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G620590 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.0e-57
Identity = 122/145 (84.14%), Postives = 126/145 (86.90%), Query Frame = 0

Query: 1   MNLQYWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60
           MNLQ WEDDEE ERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPY+S
Sbjct: 1   MNLQSWEDDEE-ERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNS 60

Query: 61  MDLDVITPIKLPSDLEMAAQVTTAEKNSLKKATSNLKKKFLSNGFSIGFSNSKSNRKMKR 120
           MDLDVITPIKLPSD E A     A KNS KKATSNL+KKFL NGFS+ F  SKS RKMK 
Sbjct: 61  MDLDVITPIKLPSDFENAPVTAMAGKNSFKKATSNLRKKFLYNGFSVCFGISKSYRKMK- 120

Query: 121 MNKKLASDFSPTPVQGGACYPNNKK 146
            NKKL SDFSPTP+QGGACYPNNKK
Sbjct: 121 -NKKLVSDFSPTPIQGGACYPNNKK 142

BLAST of HG10013774 vs. ExPASy TrEMBL
Match: A0A5D3DWX3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G002690 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.7e-55
Identity = 120/145 (82.76%), Postives = 124/145 (85.52%), Query Frame = 0

Query: 1   MNLQYWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60
           MNLQ WEDDEE ERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPY+S
Sbjct: 1   MNLQSWEDDEE-ERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNS 60

Query: 61  MDLDVITPIKLPSDLEMAAQVTTAEKNSLKKATSNLKKKFLSNGFSIGFSNSKSNRKMKR 120
           MDLDVITPIKLPSD         AEKNS KKATSNLKKK LSN FSIGF  SKS RKMK 
Sbjct: 61  MDLDVITPIKLPSDF-----TRMAEKNSFKKATSNLKKKLLSNRFSIGFGISKSYRKMK- 120

Query: 121 MNKKLASDFSPTPVQGGACYPNNKK 146
            N KL SDFSP+P++GGACYPNNKK
Sbjct: 121 -NNKLVSDFSPSPIRGGACYPNNKK 137

BLAST of HG10013774 vs. ExPASy TrEMBL
Match: A0A5A7VHQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G002780 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.1e-54
Identity = 119/145 (82.07%), Postives = 123/145 (84.83%), Query Frame = 0

Query: 1   MNLQYWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60
           MNLQ WEDDEE ERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPY+S
Sbjct: 1   MNLQSWEDDEE-ERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNS 60

Query: 61  MDLDVITPIKLPSDLEMAAQVTTAEKNSLKKATSNLKKKFLSNGFSIGFSNSKSNRKMKR 120
           MDLDVITPIKLPSD         AEKNS KKATSNLKKK LSN F IGF  SKS RKMK 
Sbjct: 61  MDLDVITPIKLPSDF-----TRMAEKNSFKKATSNLKKKLLSNRFGIGFGISKSYRKMK- 120

Query: 121 MNKKLASDFSPTPVQGGACYPNNKK 146
            N KL SDFSP+P++GGACYPNNKK
Sbjct: 121 -NNKLVSDFSPSPIRGGACYPNNKK 137

BLAST of HG10013774 vs. TAIR 10
Match: AT4G15140.1 (unknown protein; Has 26 Blast hits to 26 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 83.2 bits (204), Expect = 2.0e-16
Identity = 42/63 (66.67%), Postives = 50/63 (79.37%), Query Frame = 0

Query: 7  EDDEEKER----LIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS-M 65
          E++EEKE       KVVEYL+P+M +ELLCKFPDNSAF FDYSQS++WSPL+PR Y S  
Sbjct: 9  EEEEEKENYPLITTKVVEYLQPVMCRELLCKFPDNSAFGFDYSQSSLWSPLLPRNYASPS 68

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038898299.15.5e-6186.99uncharacterized protein LOC120085999 [Benincasa hispida][more]
XP_023536350.17.2e-6184.93uncharacterized protein LOC111797546 [Cucurbita pepo subsp. pepo][more]
KAG6591792.11.6e-6086.30hypothetical protein SDJN03_14138, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022976862.11.4e-5985.03uncharacterized protein LOC111477106 [Cucurbita maxima][more]
XP_022936857.17.4e-5882.99uncharacterized protein LOC111443318 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1IGW06.5e-6085.03uncharacterized protein LOC111477106 OS=Cucurbita maxima OX=3661 GN=LOC111477106... [more]
A0A6J1F9I63.6e-5882.99uncharacterized protein LOC111443318 OS=Cucurbita moschata OX=3662 GN=LOC1114433... [more]
A0A0A0L3541.0e-5784.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G620590 PE=4 SV=1[more]
A0A5D3DWX33.7e-5582.76Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VHQ61.1e-5482.07Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
AT4G15140.12.0e-1666.67unknown protein; Has 26 Blast hits to 26 proteins in 10 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..150
NoneNo IPR availablePANTHERPTHR34287:SF4OSJNBB0116K07.5 PROTEINcoord: 1..141
NoneNo IPR availablePANTHERPTHR34287OS06G0551500 PROTEIN-RELATEDcoord: 1..141

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10013774.1HG10013774.1mRNA