HG10013269 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10013269
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	endoribonuclease Dicer homolog 1
Location	Chr01: 28304791 .. 28306199 (+)
RNA-Seq Expression	HG10013269
Synteny	HG10013269

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGATGAGACTAGGGTTCCGGGAAGTTGTAGCAGCGAGCCAACATGTTCATTGGGGGTTTCTTCTTTCTGGTTCGATGCCTGTGACTGTGAGGACATCTCCTGTGACATCATCAATGATTATGTGGATTTCCACGCGTCTATTGCCCCCGGATCCTCAGTTGAACACACTTCCGATCAACAGAACCTGGCCAACGATTTTTTTGGTGGAATTGATCACATTCTTGACAGTATCAAGAACGGGGGAAGCCTCTCTCCGGTGACTTGTCATGGCGATCGTGATTGCACCGTGGGGGGAGGCTCTTTTATTGAGAACGAGGCATCTGGGGTTCGTGGTATGCCGGTTGATAGCTCAACTGTGCAGTCCAATGGTGTACAGATAGAAATTCTTCAATGTAATGGGCTGAGCAAGGATTATCTTGGTAATGGTAGTCATATCTGCGAGCGCTATGAATCTGATAATGGGTTCCAGCAACCAAATGGATGCGAAGGGCTCAGAGTTGTTGAAACCCCTAAGAGAAATGGAATTCAAAAGCATGAGGGGAGTAATGATGTGCTGTTGAGAGATTGGGGTTGTGATAATGAGGAGAGAAGCAATAAGAGACCTCGTATTAGCAATGGCAACAATGAGGGGCATTATTCAAACAGGGGACAGTGTTCATCTAGGGATAGAGAAAAATTTCACACTAGGAAGAGGTTGCGTGACCGAGATGAGATTGATAGAAGGGAAAGGGGTTATTTTAGGAGAAGAGAGAATTATGGTACAAGTGGAAGGGATGCAAGAGATAGGGATTTGAGGGAGCGGGAACAAAAGGGTTATTGGGAGAGGGACAAATCAGGGTCAAATGACATGGTTTTTCACTCAGGGATGTGGGAAGTTGATCGTAACAGAGAAGCAATGACCGATAATGACAAAAACCTGGAATTCCAGGGAACTGCAGAGAAAAGTTTTGAGGAGACTAAAGAAAAAGTTCCTGAGGAACAAGCTCGTCAATATCAGTTGGATGTTCTCGAACAAGCTAAGAAGAAAAATACTATAGCTTTTCTCGAAACTGGGGCTGGGAAGACACTTATTGCTGTTCTTCTCATTAAAAGTATTTACAATGATTTACAAACTCAAAACAAGAAGATGCTTGCTGTATTTTTAGTTCCCAAGGTTCCACTTGTATATCAGGTTAAAAAAATAAGTAATTAATGTTCAATATAGCAAGGTTGCCTCCAGCAGCCGTTCATTGTGTAAGGAGTTGACCGTATTATCTTTCTCTGTAATTTCAGCAAGCTGAGGTTATACGTGAGAGAACTGGCTATCAAGTAGGTCATTACTGTGGTGAAATGGGTCAAGATTTTTGGGATGCTAGAAGGTGGCAGCGTGAATTTGAAACCAAACAGGTAAGAGCTCCTATTTGA

mRNA sequence

ATGGAGGATGAGACTAGGGTTCCGGGAAGTTGTAGCAGCGAGCCAACATGTTCATTGGGGGTTTCTTCTTTCTGGTTCGATGCCTGTGACTGTGAGGACATCTCCTGTGACATCATCAATGATTATGTGGATTTCCACGCGTCTATTGCCCCCGGATCCTCAGTTGAACACACTTCCGATCAACAGAACCTGGCCAACGATTTTTTTGGTGGAATTGATCACATTCTTGACAGTATCAAGAACGGGGGAAGCCTCTCTCCGGTGACTTGTCATGGCGATCGTGATTGCACCGTGGGGGGAGGCTCTTTTATTGAGAACGAGGCATCTGGGGTTCGTGGTATGCCGGTTGATAGCTCAACTGTGCAGTCCAATGGTGTACAGATAGAAATTCTTCAATGTAATGGGCTGAGCAAGGATTATCTTGGTAATGGTAGTCATATCTGCGAGCGCTATGAATCTGATAATGGGTTCCAGCAACCAAATGGATGCGAAGGGCTCAGAGTTGTTGAAACCCCTAAGAGAAATGGAATTCAAAAGCATGAGGGGAGTAATGATGTGCTGTTGAGAGATTGGGGTTGTGATAATGAGGAGAGAAGCAATAAGAGACCTCGTATTAGCAATGGCAACAATGAGGGGCATTATTCAAACAGGGGACAGTGTTCATCTAGGGATAGAGAAAAATTTCACACTAGGAAGAGGTTGCGTGACCGAGATGAGATTGATAGAAGGGAAAGGGGTTATTTTAGGAGAAGAGAGAATTATGGTACAAGTGGAAGGGATGCAAGAGATAGGGATTTGAGGGAGCGGGAACAAAAGGGTTATTGGGAGAGGGACAAATCAGGGTCAAATGACATGGTTTTTCACTCAGGGATGTGGGAAGTTGATCGTAACAGAGAAGCAATGACCGATAATGACAAAAACCTGGAATTCCAGGGAACTGCAGAGAAAAGTTTTGAGGAGACTAAAGAAAAAGTTCCTGAGGAACAAGCTCGTCAATATCAGTTGGATGTTCTCGAACAAGCTAAGAAGAAAAATACTATAGCTTTTCTCGAAACTGGGGCTGGGAAGACACTTATTGCTGTTCTTCTCATTAAAAGTATTTACAATGATTTACAAACTCAAAACAAGAAGATGCTTGCTGTATTTTTAGTTCCCAAGGTTCCACTTGTATATCAGCAAGCTGAGGTTATACGTGAGAGAACTGGCTATCAAGTAGGTCATTACTGTGGTGAAATGGGTCAAGATTTTTGGGATGCTAGAAGGTGGCAGCGTGAATTTGAAACCAAACAGGTAAGAGCTCCTATTTGA

Coding sequence (CDS)

ATGGAGGATGAGACTAGGGTTCCGGGAAGTTGTAGCAGCGAGCCAACATGTTCATTGGGGGTTTCTTCTTTCTGGTTCGATGCCTGTGACTGTGAGGACATCTCCTGTGACATCATCAATGATTATGTGGATTTCCACGCGTCTATTGCCCCCGGATCCTCAGTTGAACACACTTCCGATCAACAGAACCTGGCCAACGATTTTTTTGGTGGAATTGATCACATTCTTGACAGTATCAAGAACGGGGGAAGCCTCTCTCCGGTGACTTGTCATGGCGATCGTGATTGCACCGTGGGGGGAGGCTCTTTTATTGAGAACGAGGCATCTGGGGTTCGTGGTATGCCGGTTGATAGCTCAACTGTGCAGTCCAATGGTGTACAGATAGAAATTCTTCAATGTAATGGGCTGAGCAAGGATTATCTTGGTAATGGTAGTCATATCTGCGAGCGCTATGAATCTGATAATGGGTTCCAGCAACCAAATGGATGCGAAGGGCTCAGAGTTGTTGAAACCCCTAAGAGAAATGGAATTCAAAAGCATGAGGGGAGTAATGATGTGCTGTTGAGAGATTGGGGTTGTGATAATGAGGAGAGAAGCAATAAGAGACCTCGTATTAGCAATGGCAACAATGAGGGGCATTATTCAAACAGGGGACAGTGTTCATCTAGGGATAGAGAAAAATTTCACACTAGGAAGAGGTTGCGTGACCGAGATGAGATTGATAGAAGGGAAAGGGGTTATTTTAGGAGAAGAGAGAATTATGGTACAAGTGGAAGGGATGCAAGAGATAGGGATTTGAGGGAGCGGGAACAAAAGGGTTATTGGGAGAGGGACAAATCAGGGTCAAATGACATGGTTTTTCACTCAGGGATGTGGGAAGTTGATCGTAACAGAGAAGCAATGACCGATAATGACAAAAACCTGGAATTCCAGGGAACTGCAGAGAAAAGTTTTGAGGAGACTAAAGAAAAAGTTCCTGAGGAACAAGCTCGTCAATATCAGTTGGATGTTCTCGAACAAGCTAAGAAGAAAAATACTATAGCTTTTCTCGAAACTGGGGCTGGGAAGACACTTATTGCTGTTCTTCTCATTAAAAGTATTTACAATGATTTACAAACTCAAAACAAGAAGATGCTTGCTGTATTTTTAGTTCCCAAGGTTCCACTTGTATATCAGCAAGCTGAGGTTATACGTGAGAGAACTGGCTATCAAGTAGGTCATTACTGTGGTGAAATGGGTCAAGATTTTTGGGATGCTAGAAGGTGGCAGCGTGAATTTGAAACCAAACAGGTAAGAGCTCCTATTTGA

Protein sequence

MEDETRVPGSCSSEPTCSLGVSSFWFDACDCEDISCDIINDYVDFHASIAPGSSVEHTSDQQNLANDFFGGIDHILDSIKNGGSLSPVTCHGDRDCTVGGGSFIENEASGVRGMPVDSSTVQSNGVQIEILQCNGLSKDYLGNGSHICERYESDNGFQQPNGCEGLRVVETPKRNGIQKHEGSNDVLLRDWGCDNEERSNKRPRISNGNNEGHYSNRGQCSSRDREKFHTRKRLRDRDEIDRRERGYFRRRENYGTSGRDARDRDLREREQKGYWERDKSGSNDMVFHSGMWEVDRNREAMTDNDKNLEFQGTAEKSFEETKEKVPEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFETKQVRAPI

Homology

[Close]

BLAST of HG10013269 vs. NCBI nr
Match: XP_038883493.1 (endoribonuclease Dicer homolog 1 [Benincasa hispida])

HSP 1 Score: 785.4 bits (2027), Expect = 2.5e-223
Identity = 398/431 (92.34%), Postives = 407/431 (94.43%), Query Frame = 0


Query: 1   MEDETRVPGSCSSEPTCSLGVSSFWFDACDCEDISCDIINDYVDFHASIAPGSSVEHTSD 60
           MEDETRVPGS SSEPTCSLGVSSFW DA  CEDISCDIIND+VDFHASIAPGSS EHTSD
Sbjct: 1   MEDETRVPGSFSSEPTCSLGVSSFWLDA--CEDISCDIINDFVDFHASIAPGSSAEHTSD 60

Query: 61  QQNLANDFFGGIDHILDSIKNGGSLSPVTCHGDRDCTVGGGSFIENEASGVRGMPVDSST 120
           QQNLANDFFGGIDHILDSIKNGGSLSPVTC+GDRDCTVG G FIENEASGVRGMPVDSST
Sbjct: 61  QQNLANDFFGGIDHILDSIKNGGSLSPVTCNGDRDCTVGEGFFIENEASGVRGMPVDSST 120

Query: 121 VQSNGVQIEILQCNGLSKDYLGNGSHICERYESDNGFQQPNGCEGLRVVETPKRNGIQKH 180
           VQSNGVQIEILQCNGLSKD L NG HICERYESD+GFQQPN  EGLRVVE P+RNGIQKH
Sbjct: 121 VQSNGVQIEILQCNGLSKDNLDNGRHICERYESDDGFQQPNRYEGLRVVEIPRRNGIQKH 180

Query: 181 EGSNDVLLRDWGCDNEERSNKRPRISNGNNEGHYSNRGQCSSRDREKFHTRKRLRDRDEI 240
           EGSNDV LRDWGCDNEERSNKRPRISNGNNE HY+NRGQC SRDREKFHTRKRLRDRDEI
Sbjct: 181 EGSNDVPLRDWGCDNEERSNKRPRISNGNNERHYANRGQCPSRDREKFHTRKRLRDRDEI 240

Query: 241 DRRERGYFRRRENYGTSGRDARDRDLREREQKGYWERDKSGSNDMVFHSGMWEVDRNREA 300
            RRE+GYFRRRE+Y TSGRD+RDRDL EREQKGYWERDKSGSNDMVFHSGMWE DRNRE 
Sbjct: 241 GRREKGYFRRREHYCTSGRDSRDRDLGEREQKGYWERDKSGSNDMVFHSGMWEADRNRET 300

Query: 301 MTDNDKNLEFQGTAEKSFEETKEKVPEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIA 360
           MTDNDKNLEFQGTAEKS EE KEK PEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIA
Sbjct: 301 MTDNDKNLEFQGTAEKSSEEIKEKNPEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIA 360

Query: 361 VLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR 420
           VLLIKSIYNDLQT+NKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR
Sbjct: 361 VLLIKSIYNDLQTRNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR 420

Query: 421 RWQREFETKQV 432
           RWQREFETKQV
Sbjct: 421 RWQREFETKQV 429

[Close]

BLAST of HG10013269 vs. NCBI nr
Match: XP_011650612.1 (endoribonuclease Dicer homolog 1 [Cucumis sativus] >KGN56328.1 hypothetical protein Csa_010453 [Cucumis sativus])

HSP 1 Score: 765.4 bits (1975), Expect = 2.7e-217
Identity = 386/431 (89.56%), Postives = 401/431 (93.04%), Query Frame = 0


Query: 1   MEDETRVPGSCSSEPTCSLGVSSFWFDACDCEDISCDIINDYVDFHASIAPGSSVEHTSD 60
           MEDETRVPGS SSEP CSLGVSSFW DA  CEDI CD IND+VDF ASI PGSSV+HTSD
Sbjct: 1   MEDETRVPGSFSSEPACSLGVSSFWLDA--CEDIPCD-INDFVDFQASITPGSSVDHTSD 60

Query: 61  QQNLANDFFGGIDHILDSIKNGGSLSPVTCHGDRDCTVGGGSFIENEASGVRGMPVDSST 120
           QQNL+NDFFGGIDH LDSIKNGGSLSPVTC+GDRDCTV  G FIEN+ASGVR MPVDSST
Sbjct: 61  QQNLSNDFFGGIDHFLDSIKNGGSLSPVTCNGDRDCTVREGFFIENDASGVRDMPVDSST 120

Query: 121 VQSNGVQIEILQCNGLSKDYLGNGSHICERYESDNGFQQPNGCEGLRVVETPKRNGIQKH 180
           VQSNG QIEILQCNGLSKD L NGSHICERYES NGFQ PNGCEGLRVVETPKRNG++KH
Sbjct: 121 VQSNGAQIEILQCNGLSKDNLDNGSHICERYESVNGFQSPNGCEGLRVVETPKRNGVKKH 180

Query: 181 EGSNDVLLRDWGCDNEERSNKRPRISNGNNEGHYSNRGQCSSRDREKFHTRKRLRDRDEI 240
           E +ND  LR WGCDNEERSNKRPRISNGNNE +YSNRGQC SRDREKFHTRKRLRDRDEI
Sbjct: 181 ERTNDTSLRGWGCDNEERSNKRPRISNGNNERYYSNRGQCLSRDREKFHTRKRLRDRDEI 240

Query: 241 DRRERGYFRRRENYGTSGRDARDRDLREREQKGYWERDKSGSNDMVFHSGMWEVDRNREA 300
           DRRER YFRRRE+YGT G+DARDRDLREREQKGYWERDKSGSNDMVFHSGMWE DRNR+A
Sbjct: 241 DRRERSYFRRREHYGTGGKDARDRDLREREQKGYWERDKSGSNDMVFHSGMWEADRNRDA 300

Query: 301 MTDNDKNLEFQGTAEKSFEETKEKVPEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIA 360
           MTDNDKNLEFQGTA+KS +E KEK+PEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIA
Sbjct: 301 MTDNDKNLEFQGTADKSSKEIKEKIPEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIA 360

Query: 361 VLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR 420
           VLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR
Sbjct: 361 VLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR 420

Query: 421 RWQREFETKQV 432
           RWQREFETKQV
Sbjct: 421 RWQREFETKQV 428

[Close]

BLAST of HG10013269 vs. NCBI nr
Match: KAA0048796.1 (endoribonuclease Dicer-like protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 757.3 bits (1954), Expect = 7.3e-215
Identity = 384/431 (89.10%), Postives = 397/431 (92.11%), Query Frame = 0


Query: 1   MEDETRVPGSCSSEPTCSLGVSSFWFDACDCEDISCDIINDYVDFHASIAPGSSVEHTSD 60
           MEDETRVPGS SSEPTCSLGVSSFW DA  CEDISCDIIND+VDF ASI PGSSV+HTSD
Sbjct: 1   MEDETRVPGSFSSEPTCSLGVSSFWLDA--CEDISCDIINDFVDFQASITPGSSVDHTSD 60

Query: 61  QQNLANDFFGGIDHILDSIKNGGSLSPVTCHGDRDCTVGGGSFIENEASGVRGMPVDSST 120
           Q NL+NDFFGGIDHILDSIKNGGSLSPVTC+ DRDC V  G FIEN ASGVR M VDSST
Sbjct: 61  QHNLSNDFFGGIDHILDSIKNGGSLSPVTCNVDRDCNVREGLFIENNASGVRDMSVDSST 120

Query: 121 VQSNGVQIEILQCNGLSKDYLGNGSHICERYESDNGFQQPNGCEGLRVVETPKRNGIQKH 180
           VQSNGVQIEILQC+G SKD L NGSHICERYES NG Q P  CEGLRVVET KRNG+QKH
Sbjct: 121 VQSNGVQIEILQCSGPSKDNLDNGSHICERYESVNGSQPPYECEGLRVVETSKRNGVQKH 180

Query: 181 EGSNDVLLRDWGCDNEERSNKRPRISNGNNEGHYSNRGQCSSRDREKFHTRKRLRDRDEI 240
           EGSND  LRDWGCDNEE+SNKRPRISNGNNE HYSNRGQC SRDREKFHTRKRLRDRDEI
Sbjct: 181 EGSNDASLRDWGCDNEEKSNKRPRISNGNNERHYSNRGQCPSRDREKFHTRKRLRDRDEI 240

Query: 241 DRRERGYFRRRENYGTSGRDARDRDLREREQKGYWERDKSGSNDMVFHSGMWEVDRNREA 300
           DRRER YFRRRE+YGT G+DARDRDLREREQKGYWERDKSGSNDMVFHSGMWE DRNREA
Sbjct: 241 DRRERSYFRRREHYGTGGKDARDRDLREREQKGYWERDKSGSNDMVFHSGMWEADRNREA 300

Query: 301 MTDNDKNLEFQGTAEKSFEETKEKVPEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIA 360
           MTDN+KN EFQGTA+KS +E KEK+PEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIA
Sbjct: 301 MTDNEKNREFQGTADKSSKEIKEKIPEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIA 360

Query: 361 VLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR 420
           VLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR
Sbjct: 361 VLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR 420

Query: 421 RWQREFETKQV 432
           RWQREFETKQV
Sbjct: 421 RWQREFETKQV 429

[Close]

BLAST of HG10013269 vs. NCBI nr
Match: XP_008437750.1 (PREDICTED: endoribonuclease Dicer homolog 1 [Cucumis melo] >TYK20748.1 endoribonuclease Dicer-like protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 757.3 bits (1954), Expect = 7.3e-215
Identity = 384/431 (89.10%), Postives = 397/431 (92.11%), Query Frame = 0


Query: 1   MEDETRVPGSCSSEPTCSLGVSSFWFDACDCEDISCDIINDYVDFHASIAPGSSVEHTSD 60
           MEDETRVPGS SSEPTCSLGVSSFW DA  CEDISCDIIND+VDF ASI PGSSV+HTSD
Sbjct: 1   MEDETRVPGSFSSEPTCSLGVSSFWLDA--CEDISCDIINDFVDFQASITPGSSVDHTSD 60

Query: 61  QQNLANDFFGGIDHILDSIKNGGSLSPVTCHGDRDCTVGGGSFIENEASGVRGMPVDSST 120
           Q NL+NDFFGGIDHILDSIKNGGSLSPVTC+ DRDC V  G FIEN ASGVR M VDSST
Sbjct: 61  QHNLSNDFFGGIDHILDSIKNGGSLSPVTCNVDRDCNVREGLFIENNASGVRDMSVDSST 120

Query: 121 VQSNGVQIEILQCNGLSKDYLGNGSHICERYESDNGFQQPNGCEGLRVVETPKRNGIQKH 180
           VQSNGVQIEILQC+G SKD L NGSHICERYES NG Q P  CEGLRVVET KRNG+QKH
Sbjct: 121 VQSNGVQIEILQCSGPSKDNLDNGSHICERYESVNGSQPPYECEGLRVVETSKRNGVQKH 180

Query: 181 EGSNDVLLRDWGCDNEERSNKRPRISNGNNEGHYSNRGQCSSRDREKFHTRKRLRDRDEI 240
           EGSND  LRDWGCDNEE+SNKRPRISNGNNE HYSNRGQC SRDREKFHTRKRLRDRDEI
Sbjct: 181 EGSNDASLRDWGCDNEEKSNKRPRISNGNNERHYSNRGQCPSRDREKFHTRKRLRDRDEI 240

Query: 241 DRRERGYFRRRENYGTSGRDARDRDLREREQKGYWERDKSGSNDMVFHSGMWEVDRNREA 300
           DRRER YFRRRE+YGT G+DARDRDLREREQKGYWERDKSGSNDMVFHSGMWE DRNREA
Sbjct: 241 DRRERSYFRRREHYGTGGKDARDRDLREREQKGYWERDKSGSNDMVFHSGMWEADRNREA 300

Query: 301 MTDNDKNLEFQGTAEKSFEETKEKVPEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIA 360
           MTDN+KN EFQGTA+KS +E KEK+PEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIA
Sbjct: 301 MTDNEKNREFQGTADKSSKEIKEKIPEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIA 360

Query: 361 VLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR 420
           VLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR
Sbjct: 361 VLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR 420

Query: 421 RWQREFETKQV 432
           RWQREFETKQV
Sbjct: 421 RWQREFETKQV 429

[Close]

BLAST of HG10013269 vs. NCBI nr
Match: XP_023539589.1 (endoribonuclease Dicer homolog 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 716.1 bits (1847), Expect = 1.9e-202
Identity = 361/431 (83.76%), Postives = 392/431 (90.95%), Query Frame = 0


Query: 1   MEDETRVPGSCSSEPTCSLGVSSFWFDACDCEDISCDIINDYVDFHASIAPGSSVEHTSD 60
           MED+TR PGS +++PTCS GVSSFW DA  CEDISC++IND+VDFHASIAP SSVE+TS 
Sbjct: 1   MEDDTRTPGSFAADPTCSSGVSSFWLDA--CEDISCELINDFVDFHASIAPESSVENTSV 60

Query: 61  QQNLANDFFGGIDHILDSIKNGGSLSPVTCHGDRDCTVGGGSFIENEASGVRGMPVDSST 120
           Q NLANDFFGGIDHILDSIKNGG+LSPVTC+GDRD TVG   +IEN+ASGVR M VD+ST
Sbjct: 61  QHNLANDFFGGIDHILDSIKNGGTLSPVTCNGDRDGTVGEDFYIENQASGVRDMLVDTST 120

Query: 121 VQSNGVQIEILQCNGLSKDYLGNGSHICERYESDNGFQQPNGCEGLRVVETPKRNGIQKH 180
           +Q+N VQIEILQCN LSKD  G+GS ICE  ES+NGF+QPNGCEGL VVETP RNG+QKH
Sbjct: 121 MQANDVQIEILQCNELSKDSFGDGSRICEGDESENGFKQPNGCEGLSVVETPNRNGVQKH 180

Query: 181 EGSNDVLLRDWGCDNEERSNKRPRISNGNNEGHYSNRGQCSSRDREKFHTRKRLRDRDEI 240
           E SN+V LRDWGCDNEERSNKRPR SNGNNE HYSNRGQC SRDREKF +RKRLR+RDE 
Sbjct: 181 EESNNVPLRDWGCDNEERSNKRPRFSNGNNERHYSNRGQCPSRDREKFVSRKRLRERDES 240

Query: 241 DRRERGYFRRRENYGTSGRDARDRDLREREQKGYWERDKSGSNDMVFHSGMWEVDRNREA 300
           DRR+RGY+RRRE+YGTSGRDARDRD REREQKGYWERDKSGSN+MVFHSG+WE DRNREA
Sbjct: 241 DRRDRGYYRRREHYGTSGRDARDRDSREREQKGYWERDKSGSNEMVFHSGLWEADRNREA 300

Query: 301 MTDNDKNLEFQGTAEKSFEETKEKVPEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIA 360
           MTDN+KN EFQGT ++S EETKEK+PEE ARQYQLDVLEQAKKKNTIAFLETGAGKTLIA
Sbjct: 301 MTDNEKNQEFQGTTDRSSEETKEKIPEEHARQYQLDVLEQAKKKNTIAFLETGAGKTLIA 360

Query: 361 VLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR 420
           VLLIKSI NDLQ QNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR
Sbjct: 361 VLLIKSISNDLQIQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR 420

Query: 421 RWQREFETKQV 432
           RWQREFETKQV
Sbjct: 421 RWQREFETKQV 429

[Close]

BLAST of HG10013269 vs. ExPASy Swiss-Prot
Match: Q9SP32 (Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DCL1 PE=1 SV=2)

HSP 1 Score: 288.1 bits (736), Expect = 1.6e-76
Identity = 197/437 (45.08%), Postives = 252/437 (57.67%), Query Frame = 0


Query: 1   MEDETRVPGSCSSEPTCSLGVSSFWFDACDCEDISCDIINDYVDFHASIAPGS-SVEHTS 60
           MEDE   P   + +P       S+W DA  CEDISCD+I+D V   +   P S +V  ++
Sbjct: 3   MEDE---PREATIKP-------SYWLDA--CEDISCDLIDDLV---SEFDPSSVAVNEST 62

Query: 61  DQQNLANDFFGGIDHILDSIKNGGSLSPVTCHGDRDCTVGGGSFIENEASGVRGMPVDSS 120
           D+  + NDFFGGIDHILDSIKNGG                             G+P    
Sbjct: 63  DENGVINDFFGGIDHILDSIKNGG-----------------------------GLP---- 122

Query: 121 TVQSNGVQIEILQCNGLSKDYLGNGSHICERYESDNGFQQPNGCEGLRVVETPKRNGIQK 180
              +NGV                         ++++   +      +   ET K NG+QK
Sbjct: 123 ---NNGVS------------------------DTNSQINEVTVTPQVIAKETVKENGLQK 182

Query: 181 HEGSNDVLLRDWGCDNEERSNKRPRISNGNNE-GHYSNRGQC-SSRDREKFHTRKRLRDR 240
           + G  D   ++ G    ++  KR R+ +  +E  + S RG   +SR+ ++F  RKR R+ 
Sbjct: 183 NGGKRDEFSKEEG----DKDRKRARVCSYQSERSNLSGRGHVNNSREGDRFMNRKRTRNW 242

Query: 241 DEIDRRERGYFRRRENYGTSGRDARDRDLREREQKGYWERDKSGSNDMVFHSGMWEVDRN 300
           DE    ++   R   NY   GRD        RE +GYWERDK GSN++V+ SG WE D  
Sbjct: 243 DEAGNNKKK--RECNNYRRDGRD--------REVRGYWERDKVGSNELVYRSGTWEADHE 302

Query: 301 REAMTDNDKNLEFQGTAEKSF---EETKEKVPEEQARQYQLDVLEQAKKKNTIAFLETGA 360
           R+    +  N E    AE++    EE KEKV EEQAR+YQLDVLEQAK KNTIAFLETGA
Sbjct: 303 RDVKKVSGGNRECDVKAEENKSKPEERKEKVVEEQARRYQLDVLEQAKAKNTIAFLETGA 350

Query: 361 GKTLIAVLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQ 420
           GKTLIA+LLIKS++ DL +QN+KML+VFLVPKVPLVYQQAEVIR +T +QVGHYCGEMGQ
Sbjct: 363 GKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPLVYQQAEVIRNQTCFQVGHYCGEMGQ 350

Query: 421 DFWDARRWQREFETKQV 432
           DFWD+RRWQREFE+KQV
Sbjct: 423 DFWDSRRWQREFESKQV 350

[Close]

BLAST of HG10013269 vs. ExPASy Swiss-Prot
Match: Q8LMR2 (Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DCL1 PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.3e-28
Identity = 98/208 (47.12%), Postives = 124/208 (59.62%), Query Frame = 0


Query: 192 GCDNEERSNKRPRISNGNNEGHYSNRGQCSSRDREKFHTRKRL---RDRDEIDRRERGYF 251
           G   E R  KRPR+++G   G            R+++  R  L     R   DRR R  F
Sbjct: 145 GGGGEWRDGKRPRLASGGVGG-----------PRQEWRRRPMLPPPPSRGWDDRRGRRDF 204

Query: 252 RRRENYGTSGRDARDRDLREREQKGYWERDKSGSNDMVFHSGMWEVDRNRE---AMTDND 311
            R           R  +   RE +G+WERD+ G   MVF SG WE + +RE   A T + 
Sbjct: 205 DR----------VRKHEHHRREARGFWERDRGGK--MVFRSGTWEQESDREAKRARTQDG 264

Query: 312 KNLEFQGTAEKSFEETKEK-VPEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLI 371
            ++E +  A++     +EK V EE+ARQYQL+VLEQAK +NTIAFLETGAGKTLIAVLLI
Sbjct: 265 GSMEKKAEADRMGAAQREKPVAEERARQYQLEVLEQAKSRNTIAFLETGAGKTLIAVLLI 324

Query: 372 KSIYNDLQTQNKKMLAVFLVPKVPLVYQ 393
           KS+ + +  +NKKMLAVFLVPKVPLVYQ
Sbjct: 325 KSVCDKMLKENKKMLAVFLVPKVPLVYQ 329

[Close]

BLAST of HG10013269 vs. ExPASy Swiss-Prot
Match: Q10HL3 (Endoribonuclease Dicer homolog 2a OS=Oryza sativa subsp. japonica OX=39947 GN=DCL2A PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 6.8e-22
Identity = 53/106 (50.00%), Postives = 74/106 (69.81%), Query Frame = 0


Query: 326 PEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIKSIYNDLQTQNKKMLAVFLVP 385
           P+  AR YQL+ LE+A + NT+AFLETG+GKTLIAV+L+++  + ++  + +  AVFLVP
Sbjct: 30  PKTMARWYQLEALERAVRGNTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRRFAVFLVP 89

Query: 386 KVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFETKQV 432
            V LV QQA V+ + T   V  +CGEMG DFWDA  W+ + E  +V
Sbjct: 90  TVVLVGQQARVVEQHTDLVVKQFCGEMGVDFWDAATWRSQLEDGEV 135

[Close]

BLAST of HG10013269 vs. ExPASy Swiss-Prot
Match: Q69LX2 (Endoribonuclease Dicer homolog 2b OS=Oryza sativa subsp. japonica OX=39947 GN=DCL2B PE=2 SV=2)

HSP 1 Score: 106.7 bits (265), Expect = 6.8e-22
Identity = 53/106 (50.00%), Postives = 74/106 (69.81%), Query Frame = 0


Query: 326 PEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIKSIYNDLQTQNKKMLAVFLVP 385
           P+  AR YQL+ LE+A + NT+AFLETG+GKTLIAV+L+++  + ++  + +  AVFLVP
Sbjct: 30  PKTMARWYQLEALERAVRGNTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRRFAVFLVP 89

Query: 386 KVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFETKQV 432
            V LV QQA V+ + T   V  +CGEMG DFWDA  W+ + E  +V
Sbjct: 90  TVVLVGQQARVVEQHTDLVVKQFCGEMGVDFWDAATWRSQLEDGEV 135

[Close]

BLAST of HG10013269 vs. ExPASy Swiss-Prot
Match: Q3EBC8 (Endoribonuclease Dicer homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At3g03300 PE=1 SV=2)

HSP 1 Score: 99.0 bits (245), Expect = 1.4e-19
Identity = 56/115 (48.70%), Postives = 78/115 (67.83%), Query Frame = 0


Query: 320 ETKEKV---PEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIKSIYNDLQTQNK 379
           ET ++V   P   AR YQ++ LE+A K+NTI FLETG+GKTLIA++L++S Y  L  +  
Sbjct: 11  ETTDQVSASPLHFARSYQVEALEKAIKQNTIVFLETGSGKTLIAIMLLRS-YAYLFRKPS 70

Query: 380 KMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFETKQV 432
               VFLVP+V LV QQAE ++  T  +VG Y G+MG DFWD+  W++E +  +V
Sbjct: 71  PCFCVFLVPQVVLVTQQAEALKMHTDLKVGMYWGDMGVDFWDSSTWKQEVDKYEV 124

[Close]

BLAST of HG10013269 vs. ExPASy TrEMBL
Match: A0A0A0L3I6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116650 PE=3 SV=1)

HSP 1 Score: 765.4 bits (1975), Expect = 1.3e-217
Identity = 386/431 (89.56%), Postives = 401/431 (93.04%), Query Frame = 0


Query: 1   MEDETRVPGSCSSEPTCSLGVSSFWFDACDCEDISCDIINDYVDFHASIAPGSSVEHTSD 60
           MEDETRVPGS SSEP CSLGVSSFW DA  CEDI CD IND+VDF ASI PGSSV+HTSD
Sbjct: 1   MEDETRVPGSFSSEPACSLGVSSFWLDA--CEDIPCD-INDFVDFQASITPGSSVDHTSD 60

Query: 61  QQNLANDFFGGIDHILDSIKNGGSLSPVTCHGDRDCTVGGGSFIENEASGVRGMPVDSST 120
           QQNL+NDFFGGIDH LDSIKNGGSLSPVTC+GDRDCTV  G FIEN+ASGVR MPVDSST
Sbjct: 61  QQNLSNDFFGGIDHFLDSIKNGGSLSPVTCNGDRDCTVREGFFIENDASGVRDMPVDSST 120

Query: 121 VQSNGVQIEILQCNGLSKDYLGNGSHICERYESDNGFQQPNGCEGLRVVETPKRNGIQKH 180
           VQSNG QIEILQCNGLSKD L NGSHICERYES NGFQ PNGCEGLRVVETPKRNG++KH
Sbjct: 121 VQSNGAQIEILQCNGLSKDNLDNGSHICERYESVNGFQSPNGCEGLRVVETPKRNGVKKH 180

Query: 181 EGSNDVLLRDWGCDNEERSNKRPRISNGNNEGHYSNRGQCSSRDREKFHTRKRLRDRDEI 240
           E +ND  LR WGCDNEERSNKRPRISNGNNE +YSNRGQC SRDREKFHTRKRLRDRDEI
Sbjct: 181 ERTNDTSLRGWGCDNEERSNKRPRISNGNNERYYSNRGQCLSRDREKFHTRKRLRDRDEI 240

Query: 241 DRRERGYFRRRENYGTSGRDARDRDLREREQKGYWERDKSGSNDMVFHSGMWEVDRNREA 300
           DRRER YFRRRE+YGT G+DARDRDLREREQKGYWERDKSGSNDMVFHSGMWE DRNR+A
Sbjct: 241 DRRERSYFRRREHYGTGGKDARDRDLREREQKGYWERDKSGSNDMVFHSGMWEADRNRDA 300

Query: 301 MTDNDKNLEFQGTAEKSFEETKEKVPEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIA 360
           MTDNDKNLEFQGTA+KS +E KEK+PEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIA
Sbjct: 301 MTDNDKNLEFQGTADKSSKEIKEKIPEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIA 360

Query: 361 VLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR 420
           VLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR
Sbjct: 361 VLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR 420

Query: 421 RWQREFETKQV 432
           RWQREFETKQV
Sbjct: 421 RWQREFETKQV 428

[Close]

BLAST of HG10013269 vs. ExPASy TrEMBL
Match: A0A5D3DB28 (Endoribonuclease Dicer-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00050 PE=3 SV=1)

HSP 1 Score: 757.3 bits (1954), Expect = 3.5e-215
Identity = 384/431 (89.10%), Postives = 397/431 (92.11%), Query Frame = 0


Query: 1   MEDETRVPGSCSSEPTCSLGVSSFWFDACDCEDISCDIINDYVDFHASIAPGSSVEHTSD 60
           MEDETRVPGS SSEPTCSLGVSSFW DA  CEDISCDIIND+VDF ASI PGSSV+HTSD
Sbjct: 1   MEDETRVPGSFSSEPTCSLGVSSFWLDA--CEDISCDIINDFVDFQASITPGSSVDHTSD 60

Query: 61  QQNLANDFFGGIDHILDSIKNGGSLSPVTCHGDRDCTVGGGSFIENEASGVRGMPVDSST 120
           Q NL+NDFFGGIDHILDSIKNGGSLSPVTC+ DRDC V  G FIEN ASGVR M VDSST
Sbjct: 61  QHNLSNDFFGGIDHILDSIKNGGSLSPVTCNVDRDCNVREGLFIENNASGVRDMSVDSST 120

Query: 121 VQSNGVQIEILQCNGLSKDYLGNGSHICERYESDNGFQQPNGCEGLRVVETPKRNGIQKH 180
           VQSNGVQIEILQC+G SKD L NGSHICERYES NG Q P  CEGLRVVET KRNG+QKH
Sbjct: 121 VQSNGVQIEILQCSGPSKDNLDNGSHICERYESVNGSQPPYECEGLRVVETSKRNGVQKH 180

Query: 181 EGSNDVLLRDWGCDNEERSNKRPRISNGNNEGHYSNRGQCSSRDREKFHTRKRLRDRDEI 240
           EGSND  LRDWGCDNEE+SNKRPRISNGNNE HYSNRGQC SRDREKFHTRKRLRDRDEI
Sbjct: 181 EGSNDASLRDWGCDNEEKSNKRPRISNGNNERHYSNRGQCPSRDREKFHTRKRLRDRDEI 240

Query: 241 DRRERGYFRRRENYGTSGRDARDRDLREREQKGYWERDKSGSNDMVFHSGMWEVDRNREA 300
           DRRER YFRRRE+YGT G+DARDRDLREREQKGYWERDKSGSNDMVFHSGMWE DRNREA
Sbjct: 241 DRRERSYFRRREHYGTGGKDARDRDLREREQKGYWERDKSGSNDMVFHSGMWEADRNREA 300

Query: 301 MTDNDKNLEFQGTAEKSFEETKEKVPEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIA 360
           MTDN+KN EFQGTA+KS +E KEK+PEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIA
Sbjct: 301 MTDNEKNREFQGTADKSSKEIKEKIPEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIA 360

Query: 361 VLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR 420
           VLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR
Sbjct: 361 VLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR 420

Query: 421 RWQREFETKQV 432
           RWQREFETKQV
Sbjct: 421 RWQREFETKQV 429

[Close]

BLAST of HG10013269 vs. ExPASy TrEMBL
Match: A0A5A7U3I5 (Endoribonuclease Dicer-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G00060 PE=3 SV=1)

HSP 1 Score: 757.3 bits (1954), Expect = 3.5e-215
Identity = 384/431 (89.10%), Postives = 397/431 (92.11%), Query Frame = 0


Query: 1   MEDETRVPGSCSSEPTCSLGVSSFWFDACDCEDISCDIINDYVDFHASIAPGSSVEHTSD 60
           MEDETRVPGS SSEPTCSLGVSSFW DA  CEDISCDIIND+VDF ASI PGSSV+HTSD
Sbjct: 1   MEDETRVPGSFSSEPTCSLGVSSFWLDA--CEDISCDIINDFVDFQASITPGSSVDHTSD 60

Query: 61  QQNLANDFFGGIDHILDSIKNGGSLSPVTCHGDRDCTVGGGSFIENEASGVRGMPVDSST 120
           Q NL+NDFFGGIDHILDSIKNGGSLSPVTC+ DRDC V  G FIEN ASGVR M VDSST
Sbjct: 61  QHNLSNDFFGGIDHILDSIKNGGSLSPVTCNVDRDCNVREGLFIENNASGVRDMSVDSST 120

Query: 121 VQSNGVQIEILQCNGLSKDYLGNGSHICERYESDNGFQQPNGCEGLRVVETPKRNGIQKH 180
           VQSNGVQIEILQC+G SKD L NGSHICERYES NG Q P  CEGLRVVET KRNG+QKH
Sbjct: 121 VQSNGVQIEILQCSGPSKDNLDNGSHICERYESVNGSQPPYECEGLRVVETSKRNGVQKH 180

Query: 181 EGSNDVLLRDWGCDNEERSNKRPRISNGNNEGHYSNRGQCSSRDREKFHTRKRLRDRDEI 240
           EGSND  LRDWGCDNEE+SNKRPRISNGNNE HYSNRGQC SRDREKFHTRKRLRDRDEI
Sbjct: 181 EGSNDASLRDWGCDNEEKSNKRPRISNGNNERHYSNRGQCPSRDREKFHTRKRLRDRDEI 240

Query: 241 DRRERGYFRRRENYGTSGRDARDRDLREREQKGYWERDKSGSNDMVFHSGMWEVDRNREA 300
           DRRER YFRRRE+YGT G+DARDRDLREREQKGYWERDKSGSNDMVFHSGMWE DRNREA
Sbjct: 241 DRRERSYFRRREHYGTGGKDARDRDLREREQKGYWERDKSGSNDMVFHSGMWEADRNREA 300

Query: 301 MTDNDKNLEFQGTAEKSFEETKEKVPEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIA 360
           MTDN+KN EFQGTA+KS +E KEK+PEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIA
Sbjct: 301 MTDNEKNREFQGTADKSSKEIKEKIPEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIA 360

Query: 361 VLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR 420
           VLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR
Sbjct: 361 VLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR 420

Query: 421 RWQREFETKQV 432
           RWQREFETKQV
Sbjct: 421 RWQREFETKQV 429

[Close]

BLAST of HG10013269 vs. ExPASy TrEMBL
Match: A0A1S3AUV8 (endoribonuclease Dicer homolog 1 OS=Cucumis melo OX=3656 GN=LOC103483092 PE=3 SV=1)

HSP 1 Score: 757.3 bits (1954), Expect = 3.5e-215
Identity = 384/431 (89.10%), Postives = 397/431 (92.11%), Query Frame = 0


Query: 1   MEDETRVPGSCSSEPTCSLGVSSFWFDACDCEDISCDIINDYVDFHASIAPGSSVEHTSD 60
           MEDETRVPGS SSEPTCSLGVSSFW DA  CEDISCDIIND+VDF ASI PGSSV+HTSD
Sbjct: 1   MEDETRVPGSFSSEPTCSLGVSSFWLDA--CEDISCDIINDFVDFQASITPGSSVDHTSD 60

Query: 61  QQNLANDFFGGIDHILDSIKNGGSLSPVTCHGDRDCTVGGGSFIENEASGVRGMPVDSST 120
           Q NL+NDFFGGIDHILDSIKNGGSLSPVTC+ DRDC V  G FIEN ASGVR M VDSST
Sbjct: 61  QHNLSNDFFGGIDHILDSIKNGGSLSPVTCNVDRDCNVREGLFIENNASGVRDMSVDSST 120

Query: 121 VQSNGVQIEILQCNGLSKDYLGNGSHICERYESDNGFQQPNGCEGLRVVETPKRNGIQKH 180
           VQSNGVQIEILQC+G SKD L NGSHICERYES NG Q P  CEGLRVVET KRNG+QKH
Sbjct: 121 VQSNGVQIEILQCSGPSKDNLDNGSHICERYESVNGSQPPYECEGLRVVETSKRNGVQKH 180

Query: 181 EGSNDVLLRDWGCDNEERSNKRPRISNGNNEGHYSNRGQCSSRDREKFHTRKRLRDRDEI 240
           EGSND  LRDWGCDNEE+SNKRPRISNGNNE HYSNRGQC SRDREKFHTRKRLRDRDEI
Sbjct: 181 EGSNDASLRDWGCDNEEKSNKRPRISNGNNERHYSNRGQCPSRDREKFHTRKRLRDRDEI 240

Query: 241 DRRERGYFRRRENYGTSGRDARDRDLREREQKGYWERDKSGSNDMVFHSGMWEVDRNREA 300
           DRRER YFRRRE+YGT G+DARDRDLREREQKGYWERDKSGSNDMVFHSGMWE DRNREA
Sbjct: 241 DRRERSYFRRREHYGTGGKDARDRDLREREQKGYWERDKSGSNDMVFHSGMWEADRNREA 300

Query: 301 MTDNDKNLEFQGTAEKSFEETKEKVPEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIA 360
           MTDN+KN EFQGTA+KS +E KEK+PEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIA
Sbjct: 301 MTDNEKNREFQGTADKSSKEIKEKIPEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIA 360

Query: 361 VLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR 420
           VLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR
Sbjct: 361 VLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR 420

Query: 421 RWQREFETKQV 432
           RWQREFETKQV
Sbjct: 421 RWQREFETKQV 429

[Close]

BLAST of HG10013269 vs. ExPASy TrEMBL
Match: A0A6J1FDU0 (endoribonuclease Dicer homolog 1 OS=Cucurbita moschata OX=3662 GN=LOC111444561 PE=3 SV=1)

HSP 1 Score: 715.3 bits (1845), Expect = 1.5e-202
Identity = 361/431 (83.76%), Postives = 392/431 (90.95%), Query Frame = 0


Query: 1   MEDETRVPGSCSSEPTCSLGVSSFWFDACDCEDISCDIINDYVDFHASIAPGSSVEHTSD 60
           MED+TR PGS +++PTCS GVSSFW DA  CEDISC++IND+VDFHASIAP SSV++TS 
Sbjct: 1   MEDDTRTPGSFTADPTCSSGVSSFWLDA--CEDISCELINDFVDFHASIAPESSVDNTSV 60

Query: 61  QQNLANDFFGGIDHILDSIKNGGSLSPVTCHGDRDCTVGGGSFIENEASGVRGMPVDSST 120
           Q NLANDFFGGIDHILDSIKNGG+LSPVTC+GDRD TVG   +IEN+ASGVR M VD+ST
Sbjct: 61  QHNLANDFFGGIDHILDSIKNGGTLSPVTCNGDRDGTVGEDFYIENQASGVRDMLVDTST 120

Query: 121 VQSNGVQIEILQCNGLSKDYLGNGSHICERYESDNGFQQPNGCEGLRVVETPKRNGIQKH 180
           +Q+NGVQIEILQCN LSKD  G+GS ICE  ES+NGF+QPNGCEGL VVETP RNG+QKH
Sbjct: 121 MQANGVQIEILQCNELSKDGFGDGSRICEGDESENGFKQPNGCEGLSVVETPNRNGVQKH 180

Query: 181 EGSNDVLLRDWGCDNEERSNKRPRISNGNNEGHYSNRGQCSSRDREKFHTRKRLRDRDEI 240
           E S +V LRDWGCDNEERSNKRPR SNGNNE HYSNRGQC SRDREKF +RKRLR+RDE 
Sbjct: 181 EESYNVPLRDWGCDNEERSNKRPRFSNGNNERHYSNRGQCPSRDREKFVSRKRLRERDES 240

Query: 241 DRRERGYFRRRENYGTSGRDARDRDLREREQKGYWERDKSGSNDMVFHSGMWEVDRNREA 300
           DRR+RGY+RRRE+YGTSGRDARDRD REREQKGYWERDKSGSN+MVFHSGMWE DRNREA
Sbjct: 241 DRRDRGYYRRREHYGTSGRDARDRDSREREQKGYWERDKSGSNEMVFHSGMWEADRNREA 300

Query: 301 MTDNDKNLEFQGTAEKSFEETKEKVPEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIA 360
           MTDN+KN EFQGT ++S EETKEK+PEE ARQYQLDVLEQAKKKNTIAFLETGAGKTLIA
Sbjct: 301 MTDNEKNQEFQGTTDRSSEETKEKIPEEHARQYQLDVLEQAKKKNTIAFLETGAGKTLIA 360

Query: 361 VLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR 420
           VLLIKSI NDLQ QNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR
Sbjct: 361 VLLIKSISNDLQIQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR 420

Query: 421 RWQREFETKQV 432
           RWQREFETKQV
Sbjct: 421 RWQREFETKQV 429

[Close]

BLAST of HG10013269 vs. TAIR 10
Match: AT1G01040.1 (dicer-like 1 )

HSP 1 Score: 288.1 bits (736), Expect = 1.2e-77
Identity = 197/437 (45.08%), Postives = 252/437 (57.67%), Query Frame = 0


Query: 1   MEDETRVPGSCSSEPTCSLGVSSFWFDACDCEDISCDIINDYVDFHASIAPGS-SVEHTS 60
           MEDE   P   + +P       S+W DA  CEDISCD+I+D V   +   P S +V  ++
Sbjct: 3   MEDE---PREATIKP-------SYWLDA--CEDISCDLIDDLV---SEFDPSSVAVNEST 62

Query: 61  DQQNLANDFFGGIDHILDSIKNGGSLSPVTCHGDRDCTVGGGSFIENEASGVRGMPVDSS 120
           D+  + NDFFGGIDHILDSIKNGG                             G+P    
Sbjct: 63  DENGVINDFFGGIDHILDSIKNGG-----------------------------GLP---- 122

Query: 121 TVQSNGVQIEILQCNGLSKDYLGNGSHICERYESDNGFQQPNGCEGLRVVETPKRNGIQK 180
              +NGV                         ++++   +      +   ET K NG+QK
Sbjct: 123 ---NNGVS------------------------DTNSQINEVTVTPQVIAKETVKENGLQK 182

Query: 181 HEGSNDVLLRDWGCDNEERSNKRPRISNGNNE-GHYSNRGQC-SSRDREKFHTRKRLRDR 240
           + G  D   ++ G    ++  KR R+ +  +E  + S RG   +SR+ ++F  RKR R+ 
Sbjct: 183 NGGKRDEFSKEEG----DKDRKRARVCSYQSERSNLSGRGHVNNSREGDRFMNRKRTRNW 242

Query: 241 DEIDRRERGYFRRRENYGTSGRDARDRDLREREQKGYWERDKSGSNDMVFHSGMWEVDRN 300
           DE    ++   R   NY   GRD        RE +GYWERDK GSN++V+ SG WE D  
Sbjct: 243 DEAGNNKKK--RECNNYRRDGRD--------REVRGYWERDKVGSNELVYRSGTWEADHE 302

Query: 301 REAMTDNDKNLEFQGTAEKSF---EETKEKVPEEQARQYQLDVLEQAKKKNTIAFLETGA 360
           R+    +  N E    AE++    EE KEKV EEQAR+YQLDVLEQAK KNTIAFLETGA
Sbjct: 303 RDVKKVSGGNRECDVKAEENKSKPEERKEKVVEEQARRYQLDVLEQAKAKNTIAFLETGA 350

Query: 361 GKTLIAVLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQ 420
           GKTLIA+LLIKS++ DL +QN+KML+VFLVPKVPLVYQQAEVIR +T +QVGHYCGEMGQ
Sbjct: 363 GKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPLVYQQAEVIRNQTCFQVGHYCGEMGQ 350

Query: 421 DFWDARRWQREFETKQV 432
           DFWD+RRWQREFE+KQV
Sbjct: 423 DFWDSRRWQREFESKQV 350

[Close]

BLAST of HG10013269 vs. TAIR 10
Match: AT1G01040.2 (dicer-like 1 )

HSP 1 Score: 288.1 bits (736), Expect = 1.2e-77
Identity = 197/437 (45.08%), Postives = 252/437 (57.67%), Query Frame = 0


Query: 1   MEDETRVPGSCSSEPTCSLGVSSFWFDACDCEDISCDIINDYVDFHASIAPGS-SVEHTS 60
           MEDE   P   + +P       S+W DA  CEDISCD+I+D V   +   P S +V  ++
Sbjct: 3   MEDE---PREATIKP-------SYWLDA--CEDISCDLIDDLV---SEFDPSSVAVNEST 62

Query: 61  DQQNLANDFFGGIDHILDSIKNGGSLSPVTCHGDRDCTVGGGSFIENEASGVRGMPVDSS 120
           D+  + NDFFGGIDHILDSIKNGG                             G+P    
Sbjct: 63  DENGVINDFFGGIDHILDSIKNGG-----------------------------GLP---- 122

Query: 121 TVQSNGVQIEILQCNGLSKDYLGNGSHICERYESDNGFQQPNGCEGLRVVETPKRNGIQK 180
              +NGV                         ++++   +      +   ET K NG+QK
Sbjct: 123 ---NNGVS------------------------DTNSQINEVTVTPQVIAKETVKENGLQK 182

Query: 181 HEGSNDVLLRDWGCDNEERSNKRPRISNGNNE-GHYSNRGQC-SSRDREKFHTRKRLRDR 240
           + G  D   ++ G    ++  KR R+ +  +E  + S RG   +SR+ ++F  RKR R+ 
Sbjct: 183 NGGKRDEFSKEEG----DKDRKRARVCSYQSERSNLSGRGHVNNSREGDRFMNRKRTRNW 242

Query: 241 DEIDRRERGYFRRRENYGTSGRDARDRDLREREQKGYWERDKSGSNDMVFHSGMWEVDRN 300
           DE    ++   R   NY   GRD        RE +GYWERDK GSN++V+ SG WE D  
Sbjct: 243 DEAGNNKKK--RECNNYRRDGRD--------REVRGYWERDKVGSNELVYRSGTWEADHE 302

Query: 301 REAMTDNDKNLEFQGTAEKSF---EETKEKVPEEQARQYQLDVLEQAKKKNTIAFLETGA 360
           R+    +  N E    AE++    EE KEKV EEQAR+YQLDVLEQAK KNTIAFLETGA
Sbjct: 303 RDVKKVSGGNRECDVKAEENKSKPEERKEKVVEEQARRYQLDVLEQAKAKNTIAFLETGA 350

Query: 361 GKTLIAVLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQ 420
           GKTLIA+LLIKS++ DL +QN+KML+VFLVPKVPLVYQQAEVIR +T +QVGHYCGEMGQ
Sbjct: 363 GKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPLVYQQAEVIRNQTCFQVGHYCGEMGQ 350

Query: 421 DFWDARRWQREFETKQV 432
           DFWD+RRWQREFE+KQV
Sbjct: 423 DFWDSRRWQREFESKQV 350

[Close]

BLAST of HG10013269 vs. TAIR 10
Match: AT3G03300.1 (dicer-like 2 )

HSP 1 Score: 99.0 bits (245), Expect = 1.0e-20
Identity = 56/115 (48.70%), Postives = 78/115 (67.83%), Query Frame = 0


Query: 320 ETKEKV---PEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIKSIYNDLQTQNK 379
           ET ++V   P   AR YQ++ LE+A K+NTI FLETG+GKTLIA++L++S Y  L  +  
Sbjct: 11  ETTDQVSASPLHFARSYQVEALEKAIKQNTIVFLETGSGKTLIAIMLLRS-YAYLFRKPS 70

Query: 380 KMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFETKQV 432
               VFLVP+V LV QQAE ++  T  +VG Y G+MG DFWD+  W++E +  +V
Sbjct: 71  PCFCVFLVPQVVLVTQQAEALKMHTDLKVGMYWGDMGVDFWDSSTWKQEVDKYEV 124

[Close]

BLAST of HG10013269 vs. TAIR 10
Match: AT3G03300.3 (dicer-like 2 )

HSP 1 Score: 99.0 bits (245), Expect = 1.0e-20
Identity = 56/115 (48.70%), Postives = 78/115 (67.83%), Query Frame = 0


Query: 320 ETKEKV---PEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIKSIYNDLQTQNK 379
           ET ++V   P   AR YQ++ LE+A K+NTI FLETG+GKTLIA++L++S Y  L  +  
Sbjct: 11  ETTDQVSASPLHFARSYQVEALEKAIKQNTIVFLETGSGKTLIAIMLLRS-YAYLFRKPS 70

Query: 380 KMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFETKQV 432
               VFLVP+V LV QQAE ++  T  +VG Y G+MG DFWD+  W++E +  +V
Sbjct: 71  PCFCVFLVPQVVLVTQQAEALKMHTDLKVGMYWGDMGVDFWDSSTWKQEVDKYEV 124

[Close]

BLAST of HG10013269 vs. TAIR 10
Match: AT5G20320.1 (dicer-like 4 )

HSP 1 Score: 69.3 bits (168), Expect = 8.5e-12
Identity = 43/110 (39.09%), Postives = 66/110 (60.00%), Query Frame = 0


Query: 323 EKVPEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIKSIYNDLQTQNKKMLAVF 382
           EK P + AR+YQ+++ ++A ++N I +L TG GKT IAV+LI  +   L    KK + +F
Sbjct: 117 EKDPRKIARRYQVELCKKATEENVIVYLGTGCGKTHIAVMLIYEL-GHLVLSPKKSVCIF 176

Query: 383 LVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDAR-RWQREFETKQV 432
           L P V LV QQA+VI +   ++V  +CG  G+    +   W+RE    +V
Sbjct: 177 LAPTVALVEQQAKVIADSVNFKVAIHCG--GKRIVKSHSEWEREIAANEV 223

The following BLAST results are available for this feature:

BLAST of HG10013269 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883493.1	2.5e-223	92.34	endoribonuclease Dicer homolog 1 [Benincasa hispida]	[more]
XP_011650612.1	2.7e-217	89.56	endoribonuclease Dicer homolog 1 [Cucumis sativus] >KGN56328.1 hypothetical prot...	[more]
KAA0048796.1	7.3e-215	89.10	endoribonuclease Dicer-like protein 1 [Cucumis melo var. makuwa]	[more]
XP_008437750.1	7.3e-215	89.10	PREDICTED: endoribonuclease Dicer homolog 1 [Cucumis melo] >TYK20748.1 endoribon...	[more]
XP_023539589.1	1.9e-202	83.76	endoribonuclease Dicer homolog 1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10013269 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SP32	1.6e-76	45.08	Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DCL1 PE=1 SV...	[more]
Q8LMR2	1.3e-28	47.12	Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DCL...	[more]
Q10HL3	6.8e-22	50.00	Endoribonuclease Dicer homolog 2a OS=Oryza sativa subsp. japonica OX=39947 GN=DC...	[more]
Q69LX2	6.8e-22	50.00	Endoribonuclease Dicer homolog 2b OS=Oryza sativa subsp. japonica OX=39947 GN=DC...	[more]
Q3EBC8	1.4e-19	48.70	Endoribonuclease Dicer homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At3g03300 PE...	[more]

BLAST of HG10013269 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3I6	1.3e-217	89.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116650 PE=3 SV=1	[more]
A0A5D3DB28	3.5e-215	89.10	Endoribonuclease Dicer-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5A7U3I5	3.5e-215	89.10	Endoribonuclease Dicer-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3AUV8	3.5e-215	89.10	endoribonuclease Dicer homolog 1 OS=Cucumis melo OX=3656 GN=LOC103483092 PE=3 SV...	[more]
A0A6J1FDU0	1.5e-202	83.76	endoribonuclease Dicer homolog 1 OS=Cucurbita moschata OX=3662 GN=LOC111444561 P...	[more]

BLAST of HG10013269 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01040.1	1.2e-77	45.08	dicer-like 1	[more]
AT1G01040.2	1.2e-77	45.08	dicer-like 1	[more]
AT3G03300.1	1.0e-20	48.70	dicer-like 2	[more]
AT3G03300.3	1.0e-20	48.70	dicer-like 2	[more]
AT5G20320.1	8.5e-12	39.09	dicer-like 4	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 333..405 e-value: 3.0E-6 score: 27.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 324..432 e-value: 7.5E-29 score: 102.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 301..420
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..232
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..232
None	No IPR available	PANTHER	PTHR14950:SF44	ENDORIBONUCLEASE DICER HOMOLOG 1	coord: 285..431
None	No IPR available	PANTHER	PTHR14950	DICER-RELATED	coord: 285..431
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 337..435 score: 11.200697

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10013269.1	HG10013269.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010216	maintenance of DNA methylation
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:0010267	production of ta-siRNAs involved in RNA interference
biological_process	GO:0051214	RNAi-mediated antiviral immunity against RNA virus
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003725	double-stranded RNA binding
molecular_function	GO:0004525	ribonuclease III activity
molecular_function	GO:0003676	nucleic acid binding