Homology
BLAST of HG10013229 vs. NCBI nr
Match:
XP_008444214.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g02060, chloroplastic [Cucumis melo] >XP_008444216.1 PREDICTED: pentatricopeptide repeat-containing protein At1g02060, chloroplastic [Cucumis melo] >KAA0052234.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK01797.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1360.9 bits (3521), Expect = 0.0e+00
Identity = 691/757 (91.28%), Postives = 721/757 (95.24%), Query Frame = 0
Query: 1 MAAISSSKDRATALFKRQSLSSYRRLPALRCYSSRLTKTETKSSTKTKKARGMAQMINSK 60
MA +S SK+ AT LFK QSL+SY RLP LRCYSSRLT+T TKSSTKT+KAR MA+MINSK
Sbjct: 1 MAGLSISKNMATVLFKSQSLNSYPRLPTLRCYSSRLTETVTKSSTKTEKARAMARMINSK 60
Query: 61 PWSSDLESSLASLSPSLSKTTVLQTLGFLRDPSKALQFFNWAQEMGYAHTEQSYFSMLEI 120
PWSSDLESSLASLSPSLSKTTVLQTLGFLRDP KALQFFNWAQEMGY HTEQSYFSMLEI
Sbjct: 61 PWSSDLESSLASLSPSLSKTTVLQTLGFLRDPPKALQFFNWAQEMGYTHTEQSYFSMLEI 120
Query: 121 LGRNRHLNTARNFLFSIEKRSRGVVKLEARFFNSLMRNFSRAGLFQESIKLFTIMKSHGV 180
LGRNRHLNTARNFLFSIEKRSRG+VKLEARFFNSLMRNFSRAGLFQESIK+FTIMKSHGV
Sbjct: 121 LGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFSRAGLFQESIKVFTIMKSHGV 180
Query: 181 SPSVVTFNSLLTILLKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGF 240
SPSVVTFNSLLTILLKRGRTNMAKNVY EMLSTYGVTPDT+TFNILIRGFCMNGMVD+GF
Sbjct: 181 SPSVVTFNSLLTILLKRGRTNMAKNVYYEMLSTYGVTPDTYTFNILIRGFCMNGMVDDGF 240
Query: 241 RIFKDLSRFGCEPDVITYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLVR 300
RIF DL RFGCEPDV+TYNTLVDGLCRAGKVTVAYN+ KGMGKKSVDLNPNVVTYTTL+R
Sbjct: 241 RIFNDLPRFGCEPDVVTYNTLVDGLCRAGKVTVAYNLAKGMGKKSVDLNPNVVTYTTLIR 300
Query: 301 GYCAKREIDKALAAFEEMANQGLKANNITYNTLIKGLCEAQKFEKIKEILETTAGDGTFS 360
GYCAKREIDKALA FEEM NQGLKANNITYNTLIKGLCEAQKFEKIKEILE TAGDGTFS
Sbjct: 301 GYCAKREIDKALAVFEEMVNQGLKANNITYNTLIKGLCEAQKFEKIKEILEATAGDGTFS 360
Query: 361 PDTCTFNTLMHCHCHAGNLDDALRVFERMTELKIRPDSATYSVLVRSLCQGGHYEKAEDL 420
PDTCTFNTLMHCHCHAGNLDDAL+VFERM+ELKI+PDSATYSVL RSLCQGGHYEKAEDL
Sbjct: 361 PDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSVLARSLCQGGHYEKAEDL 420
Query: 421 LDKLLERKILLSGDGCKPLAAAYNPIFKYLCENGKTKKAEKVFRQLMRRGTQDPPSYKTL 480
LDKLLERKILLS D CKPL A+YNPIFKYLCENGKTKKAEKVFRQLMRRGTQDPPSYKTL
Sbjct: 421 LDKLLERKILLSDDSCKPLVASYNPIFKYLCENGKTKKAEKVFRQLMRRGTQDPPSYKTL 480
Query: 481 IMGHCNEGTFESGYELLVLMLRKDFLPDLEIYESLINGLVHKDKPLLALQSLEKMLRSSH 540
IMGHC EGTFESGYELLVLMLRKDFLPD EIYESLINGL+H DKPLLALQSLEKML+SSH
Sbjct: 481 IMGHCKEGTFESGYELLVLMLRKDFLPDFEIYESLINGLLHIDKPLLALQSLEKMLKSSH 540
Query: 541 LPKSSTFHSILAKLLEQGSASESASLIQLMLDKNIRQNLSFSTGCVRLLFGARMNDKAFL 600
PKSSTFHSILAKLLEQGSASESASLIQLMLDKNIRQNLSFSTGCVRLLFGA MNDKAFL
Sbjct: 541 RPKSSTFHSILAKLLEQGSASESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFL 600
Query: 601 IVRLLYENGYSVKMEELIHYLCHCKKVIEASKMLLFSLESHQSVDMDVCNTVIFRLCEIN 660
+V LLY+ GYSVKMEELIHYLCHC+KVI+ASK+LLFSLESHQ VDMDVCNTVIF+LCEI+
Sbjct: 601 LVHLLYKKGYSVKMEELIHYLCHCRKVIQASKLLLFSLESHQFVDMDVCNTVIFQLCEIS 660
Query: 661 KLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLEEAEFVSKRMELVEMGVHQQLSC 720
KLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLEEAEFVSKRME VEMGVHQQLSC
Sbjct: 661 KLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLEEAEFVSKRMEPVEMGVHQQLSC 720
Query: 721 QNQLKVSLEAGGKLEEAEFISKRREQQLKFKNSIPRV 758
QN+LKVS EAGGKLEEAEF+ KR E++LK KNS PRV
Sbjct: 721 QNKLKVSHEAGGKLEEAEFVQKRMERRLKSKNSNPRV 757
BLAST of HG10013229 vs. NCBI nr
Match:
XP_031740077.1 (pentatricopeptide repeat-containing protein At1g02060, chloroplastic [Cucumis sativus] >KGN54533.1 hypothetical protein Csa_012823 [Cucumis sativus])
HSP 1 Score: 1333.5 bits (3450), Expect = 0.0e+00
Identity = 679/757 (89.70%), Postives = 709/757 (93.66%), Query Frame = 0
Query: 1 MAAISSSKDRATALFKRQSLSSYRRLPALRCYSSRLTKTETKSSTKTKKARGMAQMINSK 60
MA + SK A LF QSL+S+R LP LRCYSSRLT+T+TKSSTKT KA MA+MINSK
Sbjct: 1 MAGLFISKHMAKVLFTSQSLNSFRCLPTLRCYSSRLTETKTKSSTKTVKATVMAEMINSK 60
Query: 61 PWSSDLESSLASLSPSLSKTTVLQTLGFLRDPSKALQFFNWAQEMGYAHTEQSYFSMLEI 120
PWSSDLESSLASLSPSLS+TTVLQTLGFLRD SKALQFFNWAQEMGY HTEQSYFSMLEI
Sbjct: 61 PWSSDLESSLASLSPSLSQTTVLQTLGFLRDTSKALQFFNWAQEMGYTHTEQSYFSMLEI 120
Query: 121 LGRNRHLNTARNFLFSIEKRSRGVVKLEARFFNSLMRNFSRAGLFQESIKLFTIMKSHGV 180
LGRNRHLNTARNFLFSIEKRSRG+VKLEARFFNSLMRNF+RAGLFQESIK+FTIMKSHGV
Sbjct: 121 LGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGV 180
Query: 181 SPSVVTFNSLLTILLKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGF 240
SPSVVTFNSLLTILLKRGRTNMAK VYDEMLSTYGVTPDTFTFNILIRGFCMNGMVD+GF
Sbjct: 181 SPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGF 240
Query: 241 RIFKDLSRFGCEPDVITYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLVR 300
RIF DLSRFGCEPDV+TYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTL+R
Sbjct: 241 RIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIR 300
Query: 301 GYCAKREIDKALAAFEEMANQGLKANNITYNTLIKGLCEAQKFEKIKEILETTAGDGTFS 360
GYCAKREI+KALA FEEM NQGLKANNITYNTLIKGLCEA+KFEKIK+ILE TAGDGTFS
Sbjct: 301 GYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFS 360
Query: 361 PDTCTFNTLMHCHCHAGNLDDALRVFERMTELKIRPDSATYSVLVRSLCQGGHYEKAEDL 420
PDTCTFNTLMHCHCHAGNLDDAL+VFERM+ELKI+PDSATYS LVRSLCQGGHYEKAEDL
Sbjct: 361 PDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDL 420
Query: 421 LDKLLERKILLSGDGCKPLAAAYNPIFKYLCENGKTKKAEKVFRQLMRRGTQDPPSYKTL 480
LDKLLERKILLSGDGCKPL AAYNPIFKYLCE GKTKKAEK FRQLMRRGTQDPPSYKTL
Sbjct: 421 LDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTL 480
Query: 481 IMGHCNEGTFESGYELLVLMLRKDFLPDLEIYESLINGLVHKDKPLLALQSLEKMLRSSH 540
IMGHC EGTFESGYELLVLMLRKDFLPD E YESLINGL+H DKPLLALQSLEKMLRSSH
Sbjct: 481 IMGHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSH 540
Query: 541 LPKSSTFHSILAKLLEQGSASESASLIQLMLDKNIRQNLSFSTGCVRLLFGARMNDKAFL 600
P SSTFHSILAKLLEQG SESASLIQLMLDKNIRQNLSFSTGCVRLLFGA MNDKAF
Sbjct: 541 RPNSSTFHSILAKLLEQGRTSESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQ 600
Query: 601 IVRLLYENGYSVKMEELIHYLCHCKKVIEASKMLLFSLESHQSVDMDVCNTVIFRLCEIN 660
+V LLY GYSVKMEELI YLCHC+KVI+ SK+LLFSLESHQ VDMD+CNTVIF+LCEIN
Sbjct: 601 LVHLLYGKGYSVKMEELIRYLCHCRKVIQGSKLLLFSLESHQFVDMDLCNTVIFQLCEIN 660
Query: 661 KLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLEEAEFVSKRMELVEMGVHQQLSC 720
KLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLEEAEFVSKRME VEMGVHQQLSC
Sbjct: 661 KLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLEEAEFVSKRMEPVEMGVHQQLSC 720
Query: 721 QNQLKVSLEAGGKLEEAEFISKRREQQLKFKNSIPRV 758
QNQLK SL+AGGKLEEAE + KR E++LK KNS PRV
Sbjct: 721 QNQLKFSLKAGGKLEEAESVQKRMERRLKSKNSNPRV 757
BLAST of HG10013229 vs. NCBI nr
Match:
XP_038896237.1 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g02060, chloroplastic-like [Benincasa hispida])
HSP 1 Score: 1321.6 bits (3419), Expect = 0.0e+00
Identity = 673/713 (94.39%), Postives = 691/713 (96.91%), Query Frame = 0
Query: 1 MAAISSSKDRATALFKRQSLSSYRRLPALRCYSSRLTKTETKSSTKTKKARGMAQMINSK 60
MAAISSSKD+AT LF +QSL+SYRRLP LRCYSSRLTKTETKSSTKT+KARGMA++INSK
Sbjct: 1 MAAISSSKDKATVLFIKQSLNSYRRLPTLRCYSSRLTKTETKSSTKTRKARGMARIINSK 60
Query: 61 PWSSDLESSLASLSPSLSKTTVLQTLGFLRDPSKALQFFNWAQEMGYAHTEQSYFSMLEI 120
PWS +LESSLASLSPSLSKTTVLQTLGFLRDPSKALQFFNWAQE GYAHTEQSYFSMLEI
Sbjct: 61 PWSGELESSLASLSPSLSKTTVLQTLGFLRDPSKALQFFNWAQERGYAHTEQSYFSMLEI 120
Query: 121 LGRNRHLNTARNFLFSIEKRSRGVVKLEARFFNSLMRNFSRAGLFQESIKLFTIMKSHGV 180
LGRNRHLNTARNFLFSIEKRSRG+VKLEARFFNSLMRNFSRAGLFQESIKLFT MKSHGV
Sbjct: 121 LGRNRHLNTARNFLFSIEKRSRGLVKLEARFFNSLMRNFSRAGLFQESIKLFTTMKSHGV 180
Query: 181 SPSVVTFNSLLTILLKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGF 240
SPSVVTFNSLLTILLKRGRTNMAKNVYDEML TYGVTPDTFTFNILIRGFCMNGMVDEGF
Sbjct: 181 SPSVVTFNSLLTILLKRGRTNMAKNVYDEMLCTYGVTPDTFTFNILIRGFCMNGMVDEGF 240
Query: 241 RIFKDLSRFGCEPDVITYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLVR 300
RIFKDLSRFGCE DVITYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTL+R
Sbjct: 241 RIFKDLSRFGCEADVITYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIR 300
Query: 301 GYCAKREIDKALAAFEEMANQGLKANNITYNTLIKGLCEAQKFEKIKEILETTAGDGTFS 360
GYCAKREIDKALA FEEM NQGLKANNITYNTLIKGLCEA++FEK+KEIL+ TAGDGTFS
Sbjct: 301 GYCAKREIDKALAVFEEMVNQGLKANNITYNTLIKGLCEARRFEKVKEILKATAGDGTFS 360
Query: 361 PDTCTFNTLMHCHCHAGNLDDALRVFERMTELKIRPDSATYSVLVRSLCQGGHYEKAEDL 420
PDTCTFNTLMH HCH+ NLDDALRVFERMTELKI PDSATYSVLVRSLCQGGHYEKAEDL
Sbjct: 361 PDTCTFNTLMHYHCHSENLDDALRVFERMTELKIPPDSATYSVLVRSLCQGGHYEKAEDL 420
Query: 421 LDKLLERKILLSGDGCKPLAAAYNPIFKYLCENGKTKKAEKVFRQLMRRGTQDPPSYKTL 480
LDKLLERKILLS DGCKPL AAYNPIFKYLCENGKTKKAEKVFRQLMRRGTQDPPSYKTL
Sbjct: 421 LDKLLERKILLSDDGCKPLVAAYNPIFKYLCENGKTKKAEKVFRQLMRRGTQDPPSYKTL 480
Query: 481 IMGHCNEGTFESGYELLVLMLRKDFLPDLEIYESLINGLVHKDKPLLALQSLEKMLRSSH 540
IMGHC+EGTFESGYELLVLMLRKDFLPDLEIYESLINGL+HKDKPLLALQSLEKMLRSSH
Sbjct: 481 IMGHCDEGTFESGYELLVLMLRKDFLPDLEIYESLINGLLHKDKPLLALQSLEKMLRSSH 540
Query: 541 LPKSSTFHSILAKLLEQGSASESASLIQLMLDKNIRQNLSFSTGCVRLLFGARMNDKAFL 600
LPKSSTFHSILAKLLEQGSASESASLIQLMLDKNIRQNLSFSTGC+RLLFGA MNDKAF
Sbjct: 541 LPKSSTFHSILAKLLEQGSASESASLIQLMLDKNIRQNLSFSTGCIRLLFGAGMNDKAFQ 600
Query: 601 IVRLLYENGYSVKMEELIHYLCHCKKVIEASKMLLFSLESHQSVDMDVCNTVIFRLCEIN 660
IV LLYENGYSVKMEELIHYLC C KVIEASKMLLFSLESHQSVD+DVCNTVIFRLCEIN
Sbjct: 601 IVHLLYENGYSVKMEELIHYLCRCNKVIEASKMLLFSLESHQSVDVDVCNTVIFRLCEIN 660
Query: 661 KLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLEEAEFVSKRMELVEMG 714
KLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLEEAE VSKRMELVEMG
Sbjct: 661 KLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLEEAEIVSKRMELVEMG 713
BLAST of HG10013229 vs. NCBI nr
Match:
XP_023539432.1 (pentatricopeptide repeat-containing protein At1g02060, chloroplastic-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1240.3 bits (3208), Expect = 0.0e+00
Identity = 624/708 (88.14%), Postives = 664/708 (93.79%), Query Frame = 0
Query: 1 MAAISSSKDRATALFKRQSLSSYRRLPALRCYSSRLTKTETKSSTKTKKARGMAQMINSK 60
MA ISS KD A +F+RQS + +RRLP+LRCYSSRLT+ ETKS KTKKAR MA+MINSK
Sbjct: 1 MAVISSFKDGAAVVFRRQSSNMHRRLPSLRCYSSRLTEAETKSLNKTKKARDMARMINSK 60
Query: 61 PWSSDLESSLASLSPSLSKTTVLQTLGFLRDPSKALQFFNWAQEMGYAHTEQSYFSMLEI 120
PWS+DLESSLAS SPSLSKTTVLQTLGFLRDPSKAL+FFNWAQEMGYAHTEQSYFSMLEI
Sbjct: 61 PWSNDLESSLASFSPSLSKTTVLQTLGFLRDPSKALKFFNWAQEMGYAHTEQSYFSMLEI 120
Query: 121 LGRNRHLNTARNFLFSIEKRSRGVVKLEARFFNSLMRNFSRAGLFQESIKLFTIMKSHGV 180
LGRNRHLNTARNFLFSIEKRSRG VKLEARFFNSLMRNFSRAGLFQESI LFT MKSHGV
Sbjct: 121 LGRNRHLNTARNFLFSIEKRSRGAVKLEARFFNSLMRNFSRAGLFQESINLFTTMKSHGV 180
Query: 181 SPSVVTFNSLLTILLKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGF 240
SPS+VTFNSLLTILLKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGF
Sbjct: 181 SPSIVTFNSLLTILLKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGF 240
Query: 241 RIFKDLSRFGCEPDVITYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLVR 300
RIFKDLSRFGCEPDVITYNTLVDGLCR G+VT+AYNVVK MGKKSVDLNPNVVTYTTL+R
Sbjct: 241 RIFKDLSRFGCEPDVITYNTLVDGLCRGGRVTIAYNVVKAMGKKSVDLNPNVVTYTTLIR 300
Query: 301 GYCAKREIDKALAAFEEMANQGLKANNITYNTLIKGLCEAQKFEKIKEILETTAGDGTFS 360
GYCAKREI+ ALA FEEM N GLKANNITYNTLIKGLCEA+KFEK+KEILE TA DGTFS
Sbjct: 301 GYCAKREINNALAVFEEMVNLGLKANNITYNTLIKGLCEAEKFEKVKEILEATAVDGTFS 360
Query: 361 PDTCTFNTLMHCHCHAGNLDDALRVFERMTELKIRPDSATYSVLVRSLCQGGHYEKAEDL 420
PDTCTFN LMHCHC AGNLD+ALRVFERMT+LKI+PDSATYSVL+RSLC+G +YEKAE+L
Sbjct: 361 PDTCTFNILMHCHCDAGNLDEALRVFERMTKLKIQPDSATYSVLIRSLCEGKYYEKAENL 420
Query: 421 LDKLLERKILLSGDGCKPLAAAYNPIFKYLCENGKTKKAEKVFRQLMRRGTQDPPSYKTL 480
LDKLLE++ILLS DGCKPL AAYNPI KYLCENGK KKAE VFRQLMRRGTQDPPSYKTL
Sbjct: 421 LDKLLEKRILLSDDGCKPLVAAYNPILKYLCENGKAKKAETVFRQLMRRGTQDPPSYKTL 480
Query: 481 IMGHCNEGTFESGYELLVLMLRKDFLPDLEIYESLINGLVHKDKPLLALQSLEKMLRSSH 540
IMGHCNEGTFESGYELLVLMLRKDFLPD+E+YESLING +HKDKPLLALQ+LEKMLRSSH
Sbjct: 481 IMGHCNEGTFESGYELLVLMLRKDFLPDMEVYESLINGFLHKDKPLLALQTLEKMLRSSH 540
Query: 541 LPKSSTFHSILAKLLEQGSASESASLIQLMLDKNIRQNLSFSTGCVRLLFGARMNDKAFL 600
LP+SSTFHSIL KLLEQG+ASESASLIQLMLDKNIRQNL FSTGC+RLLF A +NDKAF
Sbjct: 541 LPESSTFHSILEKLLEQGNASESASLIQLMLDKNIRQNLGFSTGCIRLLFEAGINDKAFQ 600
Query: 601 IVRLLYENGYSVKMEELIHYLCHCKKVIEASKMLLFSLESHQSVDMDVCNTVIFRLCEIN 660
IVR+LY NGYSVKMEELI +LCHCKKVIEASKMLLFSLESHQ+VD+DVC+TVIF LC+IN
Sbjct: 601 IVRMLYGNGYSVKMEELILFLCHCKKVIEASKMLLFSLESHQAVDIDVCSTVIFHLCQIN 660
Query: 661 KLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLEEAEFVSKRME 709
KLSEAF LYYKLVEMGVHQ+LSCQNQLKVSLE G K EEAEFVSKRME
Sbjct: 661 KLSEAFGLYYKLVEMGVHQRLSCQNQLKVSLETGGKFEEAEFVSKRME 708
BLAST of HG10013229 vs. NCBI nr
Match:
XP_022974264.1 (pentatricopeptide repeat-containing protein At1g02060, chloroplastic-like [Cucurbita maxima])
HSP 1 Score: 1238.4 bits (3203), Expect = 0.0e+00
Identity = 623/708 (87.99%), Postives = 664/708 (93.79%), Query Frame = 0
Query: 1 MAAISSSKDRATALFKRQSLSSYRRLPALRCYSSRLTKTETKSSTKTKKARGMAQMINSK 60
MA ISS KD A +F+RQS + +RRLP+LRCYSSRLT+ ETKSS KTKKAR MA+MINSK
Sbjct: 1 MAVISSFKDGAAVVFRRQSSNMHRRLPSLRCYSSRLTEAETKSSNKTKKARDMARMINSK 60
Query: 61 PWSSDLESSLASLSPSLSKTTVLQTLGFLRDPSKALQFFNWAQEMGYAHTEQSYFSMLEI 120
PWS+DLESSLAS SPSLSKTTVLQTLGFLRDPSKAL+FFNWAQEMGYAHTEQS+FSMLEI
Sbjct: 61 PWSNDLESSLASFSPSLSKTTVLQTLGFLRDPSKALKFFNWAQEMGYAHTEQSFFSMLEI 120
Query: 121 LGRNRHLNTARNFLFSIEKRSRGVVKLEARFFNSLMRNFSRAGLFQESIKLFTIMKSHGV 180
LGRNRHLNTARNFLFSIEKRSRG VKLEARFFNSLMRNFSRAGLFQESI LFT MKSHGV
Sbjct: 121 LGRNRHLNTARNFLFSIEKRSRGAVKLEARFFNSLMRNFSRAGLFQESINLFTTMKSHGV 180
Query: 181 SPSVVTFNSLLTILLKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGF 240
SPS+VTFNSLLTILLKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGF
Sbjct: 181 SPSIVTFNSLLTILLKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGF 240
Query: 241 RIFKDLSRFGCEPDVITYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLVR 300
RIFKDLSRFGCEPDVITYNTLVDGLCR GK+T+AYNVVK MGKKSVDLNPNVVTYTTL+R
Sbjct: 241 RIFKDLSRFGCEPDVITYNTLVDGLCRGGKLTIAYNVVKAMGKKSVDLNPNVVTYTTLIR 300
Query: 301 GYCAKREIDKALAAFEEMANQGLKANNITYNTLIKGLCEAQKFEKIKEILETTAGDGTFS 360
GYCAKREI+ ALA FEEM N GLKANNITYNTLIKGLCEA+KFEK+KEILE TA DGTFS
Sbjct: 301 GYCAKREINNALAVFEEMVNLGLKANNITYNTLIKGLCEAEKFEKVKEILEATAVDGTFS 360
Query: 361 PDTCTFNTLMHCHCHAGNLDDALRVFERMTELKIRPDSATYSVLVRSLCQGGHYEKAEDL 420
PDTCTFNTLMHCHC AGNLD+ALRVFERMT+LK+RPDSATYSVL+RSLC+G +YEKAE+L
Sbjct: 361 PDTCTFNTLMHCHCDAGNLDEALRVFERMTKLKLRPDSATYSVLIRSLCEGKYYEKAENL 420
Query: 421 LDKLLERKILLSGDGCKPLAAAYNPIFKYLCENGKTKKAEKVFRQLMRRGTQDPPSYKTL 480
LDKLLE++ILLS DGCKPL AAYNPI KYLCENGK KKAE VFRQLMRRGTQDPPSYKTL
Sbjct: 421 LDKLLEKRILLSDDGCKPLVAAYNPILKYLCENGKAKKAETVFRQLMRRGTQDPPSYKTL 480
Query: 481 IMGHCNEGTFESGYELLVLMLRKDFLPDLEIYESLINGLVHKDKPLLALQSLEKMLRSSH 540
IMGHCNEGTFESGYELLVLMLRKDFLPD+E+YESLING +H DKPLLALQ+LEKMLRSSH
Sbjct: 481 IMGHCNEGTFESGYELLVLMLRKDFLPDMEVYESLINGFLHTDKPLLALQTLEKMLRSSH 540
Query: 541 LPKSSTFHSILAKLLEQGSASESASLIQLMLDKNIRQNLSFSTGCVRLLFGARMNDKAFL 600
LP+SSTFHSIL KLLEQG+ASESASLIQLMLD+NIRQNL FSTGC+RLLF A +NDKAF
Sbjct: 541 LPESSTFHSILEKLLEQGNASESASLIQLMLDQNIRQNLGFSTGCIRLLFEAGINDKAFQ 600
Query: 601 IVRLLYENGYSVKMEELIHYLCHCKKVIEASKMLLFSLESHQSVDMDVCNTVIFRLCEIN 660
IVR+LY NGYSVKMEELI +LC+CKKVIEASKMLLFSLESHQ+VD+DVC+TVIF LC IN
Sbjct: 601 IVRMLYGNGYSVKMEELILFLCNCKKVIEASKMLLFSLESHQAVDIDVCSTVIFHLCHIN 660
Query: 661 KLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLEEAEFVSKRME 709
KLSEAF LYYKLVEMGVHQQLSCQNQLKVSLE G K EEAEFVSKRME
Sbjct: 661 KLSEAFGLYYKLVEMGVHQQLSCQNQLKVSLETGGKFEEAEFVSKRME 708
BLAST of HG10013229 vs. ExPASy Swiss-Prot
Match:
O81908 (Pentatricopeptide repeat-containing protein At1g02060, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g02060 PE=2 SV=2)
HSP 1 Score: 819.7 bits (2116), Expect = 2.9e-236
Identity = 409/673 (60.77%), Postives = 528/673 (78.45%), Query Frame = 0
Query: 39 TETKSSTKTKKARGMAQMINSKPWSSDLESSLASLSPS--LSKTTVLQTLGFLRDPSKAL 98
T + STK+K AR +A+ +NS PWS +LESSL+SL PS +S+TTVLQTL ++ P+ L
Sbjct: 26 TNEERSTKSKLARSLARAVNSNPWSDELESSLSSLHPSQTISRTTVLQTLRLIKVPADGL 85
Query: 99 QFFNWAQEMGYAHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGVVKLEARFFNSLM 158
+FF+W G++H EQS+F MLE LGR R+LN ARNFLFSIE+RS G VKL+ R+FNSL+
Sbjct: 86 RFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLI 145
Query: 159 RNFSRAGLFQESIKLFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKNVYDEMLSTYGV 218
R++ AGLFQES+KLF MK G+SPSV+TFNSLL+ILLKRGRT MA +++DEM TYGV
Sbjct: 146 RSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGV 205
Query: 219 TPDTFTFNILIRGFCMNGMVDEGFRIFKDLSRFGCEPDVITYNTLVDGLCRAGKVTVAYN 278
TPD++TFN LI GFC N MVDE FRIFKD+ + C PDV+TYNT++DGLCRAGKV +A+N
Sbjct: 206 TPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHN 265
Query: 279 VVKGMGKKSVDLNPNVVTYTTLVRGYCAKREIDKALAAFEEMANQGLKANNITYNTLIKG 338
V+ GM KK+ D++PNVV+YTTLVRGYC K+EID+A+ F +M ++GLK N +TYNTLIKG
Sbjct: 266 VLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKG 325
Query: 339 LCEAQKFEKIKEILETTAGDG--TFSPDTCTFNTLMHCHCHAGNLDDALRVFERMTELKI 398
L EA ++++IK+IL D TF+PD CTFN L+ HC AG+LD A++VF+ M +K+
Sbjct: 326 LSEAHRYDEIKDIL-IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKL 385
Query: 399 RPDSATYSVLVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLAAAYNPIFKYLCENG 458
PDSA+YSVL+R+LC +++AE L ++L E+++LL D CKPLAAAYNP+F+YLC NG
Sbjct: 386 HPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANG 445
Query: 459 KTKKAEKVFRQLMRRGTQDPPSYKTLIMGHCNEGTFESGYELLVLMLRKDFLPDLEIYES 518
KTK+AEKVFRQLM+RG QDPPSYKTLI GHC EG F+ YELLVLMLR++F+PDLE YE
Sbjct: 446 KTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYEL 505
Query: 519 LINGLVHKDKPLLALQSLEKMLRSSHLPKSSTFHSILAKLLEQGSASESASLIQLMLDKN 578
LI+GL+ + LLA +L++MLRSS+LP ++TFHS+LA+L ++ A+ES L+ LML+K
Sbjct: 506 LIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKR 565
Query: 579 IRQNLSFSTGCVRLLFGARMNDKAFLIVRLLYENGYSVKMEELIHYLCHCKKVIEASKML 638
IRQN+ ST VRLLF + +KAFLIVRLLY+NGY VKMEEL+ YLC +K+++A ++
Sbjct: 566 IRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLV 625
Query: 639 LFSLESHQSVDMDVCNTVIFRLCEINKLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAG 698
LF LE Q VD+D CNTVI LC+ + SEAFSLY +LVE+G HQQLSC L+ +LEA
Sbjct: 626 LFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAA 685
Query: 699 EKLEEAEFVSKRM 708
K EE +FVSKRM
Sbjct: 686 GKWEELQFVSKRM 697
BLAST of HG10013229 vs. ExPASy Swiss-Prot
Match:
Q9ZUU3 (Pentatricopeptide repeat-containing protein At2g37230 OS=Arabidopsis thaliana OX=3702 GN=At2g37230 PE=2 SV=1)
HSP 1 Score: 358.2 bits (918), Expect = 2.4e-97
Identity = 221/687 (32.17%), Postives = 363/687 (52.84%), Query Frame = 0
Query: 36 LTKTET----------KSSTKTKKARGMAQMINSKPWSSDLESSLASLSPSLSKTTVLQT 95
LT TET K K + +M++++ W++ L++S+ L P + V
Sbjct: 64 LTSTETRPLRERFQRGKRQNHEKLEDTICRMMDNRAWTTRLQNSIRDLVPEWDHSLVYNV 123
Query: 96 LGFLRDPSKALQFFNWAQEMG-YAHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGV 155
L + ALQFF W + G H ++ M+++LG LN AR L + ++
Sbjct: 124 LHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKG--- 183
Query: 156 VKLEARFFNSLMRNFSRAGLFQESIKLFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAK 215
V + F L+ ++ +AG+ QES+K+F MK GV ++ ++NSL ++L+RGR MAK
Sbjct: 184 VPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAK 243
Query: 216 NVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGFRIFKDLSRFGCEPDVITYNTLVDG 275
+++M+S GV P T+N+++ GF ++ ++ R F+D+ G PD T+NT+++G
Sbjct: 244 RYFNKMVSE-GVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMING 303
Query: 276 LCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLVRGYCAKREIDKALAAFEEMANQGLK 335
CR K+ A + M K + P+VV+YTT+++GY A +D L FEEM + G++
Sbjct: 304 FCRFKKMDEAEKLFVEM--KGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIE 363
Query: 336 ANNITYNTLIKGLCEAQKFEKIKEILETTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALR 395
N TY+TL+ GLC+A K + K IL+ D F L+ AG++ A
Sbjct: 364 PNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATE 423
Query: 396 VFERMTELKIRPDSATYSVLVRSLCQGGHYEKAEDLLDKLLERKILL-SGDGCKPLAAAY 455
V + M L + ++ Y VL+ + C+ Y +A LLD L+E++I+L D + +AY
Sbjct: 424 VLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAY 483
Query: 456 NPIFKYLCENGKTKKAEKVFRQLMRRGTQDPPSYKTLIMGHCNEGTFESGYELLVLMLRK 515
NPI +YLC NG+T KAE +FRQLM+RG QD + LI GH EG +S YE+L +M R+
Sbjct: 484 NPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMSRR 543
Query: 516 DFLPDLEIYESLINGLVHKDKPLLALQSLEKMLRSSHLPKSSTFHSILAKLLEQGSASES 575
+ YE LI + K +P A +L+ M+ H+P SS F S++ L E G +
Sbjct: 544 GVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTA 603
Query: 576 ASLIQLMLDKN--IRQNLSFSTGCVRLLFGARMNDKAFLIVRLLYENGYSVKMEELIHYL 635
+ ++ +M+DKN I N+ + L ++A + LL +NG++ ++ L+ L
Sbjct: 604 SRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADLDSLLSVL 663
Query: 636 CHCKKVIEASKMLLFSLESHQSVDMDVCNTVIFRLCEINKLSEAFSLYYKLVEMGVHQQL 695
K I A K+L F LE S++ + V+ L K A+S+ K++E G
Sbjct: 664 SEKGKTIAALKLLDFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDW 723
Query: 696 SCQNQLKVSLEAGEKLEEAEFVSKRME 709
++L SL ++A+ +S+ ++
Sbjct: 724 KSSDELIKSLNQEGNTKQADVLSRMIK 744
BLAST of HG10013229 vs. ExPASy Swiss-Prot
Match:
Q9LSL9 (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX=3702 GN=At5g65560 PE=2 SV=1)
HSP 1 Score: 221.9 bits (564), Expect = 2.6e-56
Identity = 177/650 (27.23%), Postives = 297/650 (45.69%), Query Frame = 0
Query: 57 INSKP-W--SSDLESSLASLSPSLSKTTVLQTLGFLRDPSKALQFFNW-AQEMGYAHTEQ 116
I SKP W S L+S ++++SPS V DP AL F +W +Q Y H+
Sbjct: 69 ILSKPNWHKSPSLKSMVSAISPS----HVSSLFSLDLDPKTALNFSHWISQNPRYKHSVY 128
Query: 117 SYFSMLEILGRNRHLNTARNFLFSIEKRSRGV----------------------VKLEAR 176
SY S+L +L N ++ + K V KL
Sbjct: 129 SYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIG 188
Query: 177 FFNSLMRNFSRAGLFQESIKLFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKNVYDEM 236
+N+L+ + +R GL E +++ M V P++ T+N ++ K G A N Y
Sbjct: 189 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEA-NQYVSK 248
Query: 237 LSTYGVTPDTFTFNILIRGFCMNGMVDEGFRIFKDLSRFGCEPDVITYNTLVDGLCRAGK 296
+ G+ PD FT+ LI G+C +D F++F ++ GC + + Y L+ GLC A +
Sbjct: 249 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 308
Query: 297 VTVAYNVVKGMGKKSVDLNPNVVTYTTLVRGYCAKREIDKALAAFEEMANQGLKANNITY 356
+ A ++ M K + P V TYT L++ C +AL +EM G+K N TY
Sbjct: 309 IDEAMDLFVKM--KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTY 368
Query: 357 NTLIKGLCEAQKFEKIKEILETTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALRVFERMT 416
LI LC KFEK +E+L G P+ T+N L++ +C G ++DA+ V E M
Sbjct: 369 TVLIDSLCSQCKFEKARELLGQMLEKG-LMPNVITYNALINGYCKRGMIEDAVDVVELME 428
Query: 417 ELKIRPDSATYSVLVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLAAAYNPIFKYL 476
K+ P++ TY+ L++ C+ + KA +L+K+LERK+L P YN +
Sbjct: 429 SRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVL-------PDVVTYNSLIDGQ 488
Query: 477 CENGKTKKAEKVFRQLMRRG-TQDPPSYKTLIMGHCNEGTFESGYELLVLMLRKDFLPDL 536
C +G A ++ + RG D +Y ++I C E +L + +K P++
Sbjct: 489 CRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNV 548
Query: 537 EIYESLINGLVHKDKPLLALQSLEKMLRSSHLPKSSTFHSILAKLLEQGSASESASLIQL 596
+Y +LI+G K A LEKML + LP S TF++++ L G E+ L +
Sbjct: 549 VMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEK 608
Query: 597 MLDKNIRQNLSFSTGCVRLLFGARMNDKAFLIVRLLYENGYSVKME---ELIHYLCHCKK 656
M+ ++ +S T + L D A+ + + +G I C +
Sbjct: 609 MVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGR 668
Query: 657 VIEASKMLLFSLESHQSVDMDVCNTVIFRLCEINKLSEAFSLYYKLVEMG 677
+++A M+ E+ S D+ +++I ++ + + AF + ++ + G
Sbjct: 669 LLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
BLAST of HG10013229 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 212.6 bits (540), Expect = 1.6e-53
Identity = 120/372 (32.26%), Postives = 196/372 (52.69%), Query Frame = 0
Query: 152 FNSLMRNFSRAGLFQESIKLFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKNVYDEML 211
+NS++ + G +E++++ M + SP+ VT+N+L++ L K + A + +L
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL-ARVL 392
Query: 212 STYGVTPDTFTFNILIRGFCMNGMVDEGFRIFKDLSRFGCEPDVITYNTLVDGLCRAGKV 271
++ G+ PD TFN LI+G C+ +F+++ GCEPD TYN L+D LC GK+
Sbjct: 393 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 452
Query: 272 TVAYNVVKGMGKKSVDLNPNVVTYTTLVRGYCAKREIDKALAAFEEMANQGLKANNITYN 331
A N++K M + +V+TY TL+ G+C + +A F+EM G+ N++TYN
Sbjct: 453 DEALNMLKQM--ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYN 512
Query: 332 TLIKGLCEAQKFEKIKEILETTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALRVFERMTE 391
TLI GLC++++ E ++++ +G PD T+N+L+ C G++ A + + MT
Sbjct: 513 TLIDGLCKSRRVEDAAQLMDQMIMEGQ-KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 572
Query: 392 LKIRPDSATYSVLVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLAAAYNPIFKYLC 451
PD TY L+ LC+ G E A LL R I + G P AYNP+ + L
Sbjct: 573 NGCEPDIVTYGTLISGLCKAGRVEVASKLL-----RSIQMKGINLTP--HAYNPVIQGLF 632
Query: 452 ENGKTKKAEKVFRQLMRRGTQDPP--SYKTLIMGHCN-EGTFESGYELLVLMLRKDFLPD 511
KT +A +FR+++ + P SY+ + G CN G + LV +L K F+P+
Sbjct: 633 RKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 692
Query: 512 LEIYESLINGLV 521
L GL+
Sbjct: 693 FSSLYMLAEGLL 693
BLAST of HG10013229 vs. ExPASy Swiss-Prot
Match:
Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 211.5 bits (537), Expect = 3.6e-53
Identity = 125/420 (29.76%), Postives = 225/420 (53.57%), Query Frame = 0
Query: 135 FSIEKRSRGVVKLEARFFNSLMRNFSRAGLFQESIKLFTIMKSHGVSPSVVTFNSLLTIL 194
F + + +R L+ +N+L++ + + G F +++ + M HG++PSV+T+ SL+ +
Sbjct: 296 FVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSM 355
Query: 195 LKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGFRIFKDLSRFGCEPD 254
K G N A D+M G+ P+ T+ L+ GF G ++E +R+ ++++ G P
Sbjct: 356 CKAGNMNRAMEFLDQM-RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPS 415
Query: 255 VITYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLVRGYCAKREIDKALAA 314
V+TYN L++G C GK+ A V++ M +K L+P+VV+Y+T++ G+C ++D+AL
Sbjct: 416 VVTYNALINGHCVTGKMEDAIAVLEDMKEKG--LSPDVVSYSTVLSGFCRSYDVDEALRV 475
Query: 315 FEEMANQGLKANNITYNTLIKGLCEAQKFEKIKEILETTAGDGTFSPDTCTFNTLMHCHC 374
EM +G+K + ITY++LI+G CE ++ ++ ++ E G PD T+ L++ +C
Sbjct: 476 KREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG-LPPDEFTYTALINAYC 535
Query: 375 HAGNLDDALRVFERMTELKIRPDSATYSVLVRSLCQGGHYEKAEDLLDKLLERKILLSG- 434
G+L+ AL++ M E + PD TYSVL+ L + +A+ LL KL + + S
Sbjct: 536 MEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDV 595
Query: 435 ------DGCKPLA-AAYNPIFKYLCENGKTKKAEKVFRQLMRRGTQ-DPPSYKTLIMGHC 494
+ C + + + K C G +A++VF ++ + + D +Y +I GHC
Sbjct: 596 TYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHC 655
Query: 495 NEGTFESGYELLVLMLRKDFLPDLEIYESLINGLVHKDKPLLALQS-LEKMLRSSHLPKS 545
G Y L M++ FL +L+ L HK+ + L S + +LRS L ++
Sbjct: 656 RAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKAL-HKEGKVNELNSVIVHVLRSCELSEA 710
BLAST of HG10013229 vs. ExPASy TrEMBL
Match:
A0A1S3B9U6 (pentatricopeptide repeat-containing protein At1g02060, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487617 PE=4 SV=1)
HSP 1 Score: 1360.9 bits (3521), Expect = 0.0e+00
Identity = 691/757 (91.28%), Postives = 721/757 (95.24%), Query Frame = 0
Query: 1 MAAISSSKDRATALFKRQSLSSYRRLPALRCYSSRLTKTETKSSTKTKKARGMAQMINSK 60
MA +S SK+ AT LFK QSL+SY RLP LRCYSSRLT+T TKSSTKT+KAR MA+MINSK
Sbjct: 1 MAGLSISKNMATVLFKSQSLNSYPRLPTLRCYSSRLTETVTKSSTKTEKARAMARMINSK 60
Query: 61 PWSSDLESSLASLSPSLSKTTVLQTLGFLRDPSKALQFFNWAQEMGYAHTEQSYFSMLEI 120
PWSSDLESSLASLSPSLSKTTVLQTLGFLRDP KALQFFNWAQEMGY HTEQSYFSMLEI
Sbjct: 61 PWSSDLESSLASLSPSLSKTTVLQTLGFLRDPPKALQFFNWAQEMGYTHTEQSYFSMLEI 120
Query: 121 LGRNRHLNTARNFLFSIEKRSRGVVKLEARFFNSLMRNFSRAGLFQESIKLFTIMKSHGV 180
LGRNRHLNTARNFLFSIEKRSRG+VKLEARFFNSLMRNFSRAGLFQESIK+FTIMKSHGV
Sbjct: 121 LGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFSRAGLFQESIKVFTIMKSHGV 180
Query: 181 SPSVVTFNSLLTILLKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGF 240
SPSVVTFNSLLTILLKRGRTNMAKNVY EMLSTYGVTPDT+TFNILIRGFCMNGMVD+GF
Sbjct: 181 SPSVVTFNSLLTILLKRGRTNMAKNVYYEMLSTYGVTPDTYTFNILIRGFCMNGMVDDGF 240
Query: 241 RIFKDLSRFGCEPDVITYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLVR 300
RIF DL RFGCEPDV+TYNTLVDGLCRAGKVTVAYN+ KGMGKKSVDLNPNVVTYTTL+R
Sbjct: 241 RIFNDLPRFGCEPDVVTYNTLVDGLCRAGKVTVAYNLAKGMGKKSVDLNPNVVTYTTLIR 300
Query: 301 GYCAKREIDKALAAFEEMANQGLKANNITYNTLIKGLCEAQKFEKIKEILETTAGDGTFS 360
GYCAKREIDKALA FEEM NQGLKANNITYNTLIKGLCEAQKFEKIKEILE TAGDGTFS
Sbjct: 301 GYCAKREIDKALAVFEEMVNQGLKANNITYNTLIKGLCEAQKFEKIKEILEATAGDGTFS 360
Query: 361 PDTCTFNTLMHCHCHAGNLDDALRVFERMTELKIRPDSATYSVLVRSLCQGGHYEKAEDL 420
PDTCTFNTLMHCHCHAGNLDDAL+VFERM+ELKI+PDSATYSVL RSLCQGGHYEKAEDL
Sbjct: 361 PDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSVLARSLCQGGHYEKAEDL 420
Query: 421 LDKLLERKILLSGDGCKPLAAAYNPIFKYLCENGKTKKAEKVFRQLMRRGTQDPPSYKTL 480
LDKLLERKILLS D CKPL A+YNPIFKYLCENGKTKKAEKVFRQLMRRGTQDPPSYKTL
Sbjct: 421 LDKLLERKILLSDDSCKPLVASYNPIFKYLCENGKTKKAEKVFRQLMRRGTQDPPSYKTL 480
Query: 481 IMGHCNEGTFESGYELLVLMLRKDFLPDLEIYESLINGLVHKDKPLLALQSLEKMLRSSH 540
IMGHC EGTFESGYELLVLMLRKDFLPD EIYESLINGL+H DKPLLALQSLEKML+SSH
Sbjct: 481 IMGHCKEGTFESGYELLVLMLRKDFLPDFEIYESLINGLLHIDKPLLALQSLEKMLKSSH 540
Query: 541 LPKSSTFHSILAKLLEQGSASESASLIQLMLDKNIRQNLSFSTGCVRLLFGARMNDKAFL 600
PKSSTFHSILAKLLEQGSASESASLIQLMLDKNIRQNLSFSTGCVRLLFGA MNDKAFL
Sbjct: 541 RPKSSTFHSILAKLLEQGSASESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFL 600
Query: 601 IVRLLYENGYSVKMEELIHYLCHCKKVIEASKMLLFSLESHQSVDMDVCNTVIFRLCEIN 660
+V LLY+ GYSVKMEELIHYLCHC+KVI+ASK+LLFSLESHQ VDMDVCNTVIF+LCEI+
Sbjct: 601 LVHLLYKKGYSVKMEELIHYLCHCRKVIQASKLLLFSLESHQFVDMDVCNTVIFQLCEIS 660
Query: 661 KLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLEEAEFVSKRMELVEMGVHQQLSC 720
KLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLEEAEFVSKRME VEMGVHQQLSC
Sbjct: 661 KLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLEEAEFVSKRMEPVEMGVHQQLSC 720
Query: 721 QNQLKVSLEAGGKLEEAEFISKRREQQLKFKNSIPRV 758
QN+LKVS EAGGKLEEAEF+ KR E++LK KNS PRV
Sbjct: 721 QNKLKVSHEAGGKLEEAEFVQKRMERRLKSKNSNPRV 757
BLAST of HG10013229 vs. ExPASy TrEMBL
Match:
A0A5A7UA48 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00290 PE=4 SV=1)
HSP 1 Score: 1360.9 bits (3521), Expect = 0.0e+00
Identity = 691/757 (91.28%), Postives = 721/757 (95.24%), Query Frame = 0
Query: 1 MAAISSSKDRATALFKRQSLSSYRRLPALRCYSSRLTKTETKSSTKTKKARGMAQMINSK 60
MA +S SK+ AT LFK QSL+SY RLP LRCYSSRLT+T TKSSTKT+KAR MA+MINSK
Sbjct: 1 MAGLSISKNMATVLFKSQSLNSYPRLPTLRCYSSRLTETVTKSSTKTEKARAMARMINSK 60
Query: 61 PWSSDLESSLASLSPSLSKTTVLQTLGFLRDPSKALQFFNWAQEMGYAHTEQSYFSMLEI 120
PWSSDLESSLASLSPSLSKTTVLQTLGFLRDP KALQFFNWAQEMGY HTEQSYFSMLEI
Sbjct: 61 PWSSDLESSLASLSPSLSKTTVLQTLGFLRDPPKALQFFNWAQEMGYTHTEQSYFSMLEI 120
Query: 121 LGRNRHLNTARNFLFSIEKRSRGVVKLEARFFNSLMRNFSRAGLFQESIKLFTIMKSHGV 180
LGRNRHLNTARNFLFSIEKRSRG+VKLEARFFNSLMRNFSRAGLFQESIK+FTIMKSHGV
Sbjct: 121 LGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFSRAGLFQESIKVFTIMKSHGV 180
Query: 181 SPSVVTFNSLLTILLKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGF 240
SPSVVTFNSLLTILLKRGRTNMAKNVY EMLSTYGVTPDT+TFNILIRGFCMNGMVD+GF
Sbjct: 181 SPSVVTFNSLLTILLKRGRTNMAKNVYYEMLSTYGVTPDTYTFNILIRGFCMNGMVDDGF 240
Query: 241 RIFKDLSRFGCEPDVITYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLVR 300
RIF DL RFGCEPDV+TYNTLVDGLCRAGKVTVAYN+ KGMGKKSVDLNPNVVTYTTL+R
Sbjct: 241 RIFNDLPRFGCEPDVVTYNTLVDGLCRAGKVTVAYNLAKGMGKKSVDLNPNVVTYTTLIR 300
Query: 301 GYCAKREIDKALAAFEEMANQGLKANNITYNTLIKGLCEAQKFEKIKEILETTAGDGTFS 360
GYCAKREIDKALA FEEM NQGLKANNITYNTLIKGLCEAQKFEKIKEILE TAGDGTFS
Sbjct: 301 GYCAKREIDKALAVFEEMVNQGLKANNITYNTLIKGLCEAQKFEKIKEILEATAGDGTFS 360
Query: 361 PDTCTFNTLMHCHCHAGNLDDALRVFERMTELKIRPDSATYSVLVRSLCQGGHYEKAEDL 420
PDTCTFNTLMHCHCHAGNLDDAL+VFERM+ELKI+PDSATYSVL RSLCQGGHYEKAEDL
Sbjct: 361 PDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSVLARSLCQGGHYEKAEDL 420
Query: 421 LDKLLERKILLSGDGCKPLAAAYNPIFKYLCENGKTKKAEKVFRQLMRRGTQDPPSYKTL 480
LDKLLERKILLS D CKPL A+YNPIFKYLCENGKTKKAEKVFRQLMRRGTQDPPSYKTL
Sbjct: 421 LDKLLERKILLSDDSCKPLVASYNPIFKYLCENGKTKKAEKVFRQLMRRGTQDPPSYKTL 480
Query: 481 IMGHCNEGTFESGYELLVLMLRKDFLPDLEIYESLINGLVHKDKPLLALQSLEKMLRSSH 540
IMGHC EGTFESGYELLVLMLRKDFLPD EIYESLINGL+H DKPLLALQSLEKML+SSH
Sbjct: 481 IMGHCKEGTFESGYELLVLMLRKDFLPDFEIYESLINGLLHIDKPLLALQSLEKMLKSSH 540
Query: 541 LPKSSTFHSILAKLLEQGSASESASLIQLMLDKNIRQNLSFSTGCVRLLFGARMNDKAFL 600
PKSSTFHSILAKLLEQGSASESASLIQLMLDKNIRQNLSFSTGCVRLLFGA MNDKAFL
Sbjct: 541 RPKSSTFHSILAKLLEQGSASESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFL 600
Query: 601 IVRLLYENGYSVKMEELIHYLCHCKKVIEASKMLLFSLESHQSVDMDVCNTVIFRLCEIN 660
+V LLY+ GYSVKMEELIHYLCHC+KVI+ASK+LLFSLESHQ VDMDVCNTVIF+LCEI+
Sbjct: 601 LVHLLYKKGYSVKMEELIHYLCHCRKVIQASKLLLFSLESHQFVDMDVCNTVIFQLCEIS 660
Query: 661 KLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLEEAEFVSKRMELVEMGVHQQLSC 720
KLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLEEAEFVSKRME VEMGVHQQLSC
Sbjct: 661 KLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLEEAEFVSKRMEPVEMGVHQQLSC 720
Query: 721 QNQLKVSLEAGGKLEEAEFISKRREQQLKFKNSIPRV 758
QN+LKVS EAGGKLEEAEF+ KR E++LK KNS PRV
Sbjct: 721 QNKLKVSHEAGGKLEEAEFVQKRMERRLKSKNSNPRV 757
BLAST of HG10013229 vs. ExPASy TrEMBL
Match:
A0A0A0KYI2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G358710 PE=4 SV=1)
HSP 1 Score: 1333.5 bits (3450), Expect = 0.0e+00
Identity = 679/757 (89.70%), Postives = 709/757 (93.66%), Query Frame = 0
Query: 1 MAAISSSKDRATALFKRQSLSSYRRLPALRCYSSRLTKTETKSSTKTKKARGMAQMINSK 60
MA + SK A LF QSL+S+R LP LRCYSSRLT+T+TKSSTKT KA MA+MINSK
Sbjct: 1 MAGLFISKHMAKVLFTSQSLNSFRCLPTLRCYSSRLTETKTKSSTKTVKATVMAEMINSK 60
Query: 61 PWSSDLESSLASLSPSLSKTTVLQTLGFLRDPSKALQFFNWAQEMGYAHTEQSYFSMLEI 120
PWSSDLESSLASLSPSLS+TTVLQTLGFLRD SKALQFFNWAQEMGY HTEQSYFSMLEI
Sbjct: 61 PWSSDLESSLASLSPSLSQTTVLQTLGFLRDTSKALQFFNWAQEMGYTHTEQSYFSMLEI 120
Query: 121 LGRNRHLNTARNFLFSIEKRSRGVVKLEARFFNSLMRNFSRAGLFQESIKLFTIMKSHGV 180
LGRNRHLNTARNFLFSIEKRSRG+VKLEARFFNSLMRNF+RAGLFQESIK+FTIMKSHGV
Sbjct: 121 LGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGV 180
Query: 181 SPSVVTFNSLLTILLKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGF 240
SPSVVTFNSLLTILLKRGRTNMAK VYDEMLSTYGVTPDTFTFNILIRGFCMNGMVD+GF
Sbjct: 181 SPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGF 240
Query: 241 RIFKDLSRFGCEPDVITYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLVR 300
RIF DLSRFGCEPDV+TYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTL+R
Sbjct: 241 RIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIR 300
Query: 301 GYCAKREIDKALAAFEEMANQGLKANNITYNTLIKGLCEAQKFEKIKEILETTAGDGTFS 360
GYCAKREI+KALA FEEM NQGLKANNITYNTLIKGLCEA+KFEKIK+ILE TAGDGTFS
Sbjct: 301 GYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFS 360
Query: 361 PDTCTFNTLMHCHCHAGNLDDALRVFERMTELKIRPDSATYSVLVRSLCQGGHYEKAEDL 420
PDTCTFNTLMHCHCHAGNLDDAL+VFERM+ELKI+PDSATYS LVRSLCQGGHYEKAEDL
Sbjct: 361 PDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDL 420
Query: 421 LDKLLERKILLSGDGCKPLAAAYNPIFKYLCENGKTKKAEKVFRQLMRRGTQDPPSYKTL 480
LDKLLERKILLSGDGCKPL AAYNPIFKYLCE GKTKKAEK FRQLMRRGTQDPPSYKTL
Sbjct: 421 LDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTL 480
Query: 481 IMGHCNEGTFESGYELLVLMLRKDFLPDLEIYESLINGLVHKDKPLLALQSLEKMLRSSH 540
IMGHC EGTFESGYELLVLMLRKDFLPD E YESLINGL+H DKPLLALQSLEKMLRSSH
Sbjct: 481 IMGHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSH 540
Query: 541 LPKSSTFHSILAKLLEQGSASESASLIQLMLDKNIRQNLSFSTGCVRLLFGARMNDKAFL 600
P SSTFHSILAKLLEQG SESASLIQLMLDKNIRQNLSFSTGCVRLLFGA MNDKAF
Sbjct: 541 RPNSSTFHSILAKLLEQGRTSESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQ 600
Query: 601 IVRLLYENGYSVKMEELIHYLCHCKKVIEASKMLLFSLESHQSVDMDVCNTVIFRLCEIN 660
+V LLY GYSVKMEELI YLCHC+KVI+ SK+LLFSLESHQ VDMD+CNTVIF+LCEIN
Sbjct: 601 LVHLLYGKGYSVKMEELIRYLCHCRKVIQGSKLLLFSLESHQFVDMDLCNTVIFQLCEIN 660
Query: 661 KLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLEEAEFVSKRMELVEMGVHQQLSC 720
KLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLEEAEFVSKRME VEMGVHQQLSC
Sbjct: 661 KLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLEEAEFVSKRMEPVEMGVHQQLSC 720
Query: 721 QNQLKVSLEAGGKLEEAEFISKRREQQLKFKNSIPRV 758
QNQLK SL+AGGKLEEAE + KR E++LK KNS PRV
Sbjct: 721 QNQLKFSLKAGGKLEEAESVQKRMERRLKSKNSNPRV 757
BLAST of HG10013229 vs. ExPASy TrEMBL
Match:
A0A6J1IH36 (pentatricopeptide repeat-containing protein At1g02060, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111472905 PE=4 SV=1)
HSP 1 Score: 1238.4 bits (3203), Expect = 0.0e+00
Identity = 623/708 (87.99%), Postives = 664/708 (93.79%), Query Frame = 0
Query: 1 MAAISSSKDRATALFKRQSLSSYRRLPALRCYSSRLTKTETKSSTKTKKARGMAQMINSK 60
MA ISS KD A +F+RQS + +RRLP+LRCYSSRLT+ ETKSS KTKKAR MA+MINSK
Sbjct: 1 MAVISSFKDGAAVVFRRQSSNMHRRLPSLRCYSSRLTEAETKSSNKTKKARDMARMINSK 60
Query: 61 PWSSDLESSLASLSPSLSKTTVLQTLGFLRDPSKALQFFNWAQEMGYAHTEQSYFSMLEI 120
PWS+DLESSLAS SPSLSKTTVLQTLGFLRDPSKAL+FFNWAQEMGYAHTEQS+FSMLEI
Sbjct: 61 PWSNDLESSLASFSPSLSKTTVLQTLGFLRDPSKALKFFNWAQEMGYAHTEQSFFSMLEI 120
Query: 121 LGRNRHLNTARNFLFSIEKRSRGVVKLEARFFNSLMRNFSRAGLFQESIKLFTIMKSHGV 180
LGRNRHLNTARNFLFSIEKRSRG VKLEARFFNSLMRNFSRAGLFQESI LFT MKSHGV
Sbjct: 121 LGRNRHLNTARNFLFSIEKRSRGAVKLEARFFNSLMRNFSRAGLFQESINLFTTMKSHGV 180
Query: 181 SPSVVTFNSLLTILLKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGF 240
SPS+VTFNSLLTILLKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGF
Sbjct: 181 SPSIVTFNSLLTILLKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGF 240
Query: 241 RIFKDLSRFGCEPDVITYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLVR 300
RIFKDLSRFGCEPDVITYNTLVDGLCR GK+T+AYNVVK MGKKSVDLNPNVVTYTTL+R
Sbjct: 241 RIFKDLSRFGCEPDVITYNTLVDGLCRGGKLTIAYNVVKAMGKKSVDLNPNVVTYTTLIR 300
Query: 301 GYCAKREIDKALAAFEEMANQGLKANNITYNTLIKGLCEAQKFEKIKEILETTAGDGTFS 360
GYCAKREI+ ALA FEEM N GLKANNITYNTLIKGLCEA+KFEK+KEILE TA DGTFS
Sbjct: 301 GYCAKREINNALAVFEEMVNLGLKANNITYNTLIKGLCEAEKFEKVKEILEATAVDGTFS 360
Query: 361 PDTCTFNTLMHCHCHAGNLDDALRVFERMTELKIRPDSATYSVLVRSLCQGGHYEKAEDL 420
PDTCTFNTLMHCHC AGNLD+ALRVFERMT+LK+RPDSATYSVL+RSLC+G +YEKAE+L
Sbjct: 361 PDTCTFNTLMHCHCDAGNLDEALRVFERMTKLKLRPDSATYSVLIRSLCEGKYYEKAENL 420
Query: 421 LDKLLERKILLSGDGCKPLAAAYNPIFKYLCENGKTKKAEKVFRQLMRRGTQDPPSYKTL 480
LDKLLE++ILLS DGCKPL AAYNPI KYLCENGK KKAE VFRQLMRRGTQDPPSYKTL
Sbjct: 421 LDKLLEKRILLSDDGCKPLVAAYNPILKYLCENGKAKKAETVFRQLMRRGTQDPPSYKTL 480
Query: 481 IMGHCNEGTFESGYELLVLMLRKDFLPDLEIYESLINGLVHKDKPLLALQSLEKMLRSSH 540
IMGHCNEGTFESGYELLVLMLRKDFLPD+E+YESLING +H DKPLLALQ+LEKMLRSSH
Sbjct: 481 IMGHCNEGTFESGYELLVLMLRKDFLPDMEVYESLINGFLHTDKPLLALQTLEKMLRSSH 540
Query: 541 LPKSSTFHSILAKLLEQGSASESASLIQLMLDKNIRQNLSFSTGCVRLLFGARMNDKAFL 600
LP+SSTFHSIL KLLEQG+ASESASLIQLMLD+NIRQNL FSTGC+RLLF A +NDKAF
Sbjct: 541 LPESSTFHSILEKLLEQGNASESASLIQLMLDQNIRQNLGFSTGCIRLLFEAGINDKAFQ 600
Query: 601 IVRLLYENGYSVKMEELIHYLCHCKKVIEASKMLLFSLESHQSVDMDVCNTVIFRLCEIN 660
IVR+LY NGYSVKMEELI +LC+CKKVIEASKMLLFSLESHQ+VD+DVC+TVIF LC IN
Sbjct: 601 IVRMLYGNGYSVKMEELILFLCNCKKVIEASKMLLFSLESHQAVDIDVCSTVIFHLCHIN 660
Query: 661 KLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLEEAEFVSKRME 709
KLSEAF LYYKLVEMGVHQQLSCQNQLKVSLE G K EEAEFVSKRME
Sbjct: 661 KLSEAFGLYYKLVEMGVHQQLSCQNQLKVSLETGGKFEEAEFVSKRME 708
BLAST of HG10013229 vs. ExPASy TrEMBL
Match:
A0A6J1GE00 (pentatricopeptide repeat-containing protein At1g02060, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111453319 PE=4 SV=1)
HSP 1 Score: 1233.4 bits (3190), Expect = 0.0e+00
Identity = 620/708 (87.57%), Postives = 661/708 (93.36%), Query Frame = 0
Query: 1 MAAISSSKDRATALFKRQSLSSYRRLPALRCYSSRLTKTETKSSTKTKKARGMAQMINSK 60
MA ISS KD A +F+RQS + +RRLP LRCYSSRLT+ ETKSS +TKKAR MA+MINSK
Sbjct: 1 MAVISSFKDGAAVVFRRQSSNMHRRLPFLRCYSSRLTEAETKSSNRTKKARDMARMINSK 60
Query: 61 PWSSDLESSLASLSPSLSKTTVLQTLGFLRDPSKALQFFNWAQEMGYAHTEQSYFSMLEI 120
PWS+DLESSLAS SPSLSKTTVLQTLGFLRDPSKAL+FFNWAQEMG+AHT+QSYFS+LEI
Sbjct: 61 PWSNDLESSLASFSPSLSKTTVLQTLGFLRDPSKALKFFNWAQEMGHAHTDQSYFSILEI 120
Query: 121 LGRNRHLNTARNFLFSIEKRSRGVVKLEARFFNSLMRNFSRAGLFQESIKLFTIMKSHGV 180
LGRNRHLN ARNFLFSIEKRSRG VKLEARFFNSLMRNFSRAGLFQESI LFT MKSHGV
Sbjct: 121 LGRNRHLNAARNFLFSIEKRSRGAVKLEARFFNSLMRNFSRAGLFQESINLFTTMKSHGV 180
Query: 181 SPSVVTFNSLLTILLKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGF 240
SPS+VTFNSLLTILLKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGF
Sbjct: 181 SPSIVTFNSLLTILLKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGF 240
Query: 241 RIFKDLSRFGCEPDVITYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLVR 300
RIFKDLSRFGCEPDVITYNTLVDGLCR GKVT+AYNVVK MGKKSVDLNPNVVTYTTL+R
Sbjct: 241 RIFKDLSRFGCEPDVITYNTLVDGLCRGGKVTIAYNVVKAMGKKSVDLNPNVVTYTTLIR 300
Query: 301 GYCAKREIDKALAAFEEMANQGLKANNITYNTLIKGLCEAQKFEKIKEILETTAGDGTFS 360
GYCAKREI+ ALA FEEM N GLKANNITYNTLIKGLCEA+KFEK+KEILE TA DGTFS
Sbjct: 301 GYCAKREINNALAVFEEMVNLGLKANNITYNTLIKGLCEAEKFEKVKEILEATAVDGTFS 360
Query: 361 PDTCTFNTLMHCHCHAGNLDDALRVFERMTELKIRPDSATYSVLVRSLCQGGHYEKAEDL 420
PDTCTFNTLMHCHC AGNLD+ALRVFERMT+LKIRPDSATYSVL+RSLC+G +YEKAE+L
Sbjct: 361 PDTCTFNTLMHCHCDAGNLDEALRVFERMTKLKIRPDSATYSVLIRSLCEGKYYEKAENL 420
Query: 421 LDKLLERKILLSGDGCKPLAAAYNPIFKYLCENGKTKKAEKVFRQLMRRGTQDPPSYKTL 480
LDKLLE++ILLS DGCKPL AAYNPIFKYLCENGK KKAE VFRQLMRRGTQDPPSYKTL
Sbjct: 421 LDKLLEKRILLSDDGCKPLVAAYNPIFKYLCENGKAKKAETVFRQLMRRGTQDPPSYKTL 480
Query: 481 IMGHCNEGTFESGYELLVLMLRKDFLPDLEIYESLINGLVHKDKPLLALQSLEKMLRSSH 540
IMGHCNEGTFESGYELLVLMLRKDFLPD+E+YE+LING +HKDKPLLALQ+LEKMLRSSH
Sbjct: 481 IMGHCNEGTFESGYELLVLMLRKDFLPDMEVYEALINGFLHKDKPLLALQTLEKMLRSSH 540
Query: 541 LPKSSTFHSILAKLLEQGSASESASLIQLMLDKNIRQNLSFSTGCVRLLFGARMNDKAFL 600
LP+SSTFHSIL KLLEQG+ASESASLIQLMLDKNIRQNL FSTGC+RLLF A +NDKAF
Sbjct: 541 LPESSTFHSILEKLLEQGNASESASLIQLMLDKNIRQNLGFSTGCIRLLFEAGINDKAFQ 600
Query: 601 IVRLLYENGYSVKMEELIHYLCHCKKVIEASKMLLFSLESHQSVDMDVCNTVIFRLCEIN 660
IVR+LY NGYSVKMEELI +LCHCKK IEASKMLLFSLESHQ+VD+DVC+ VIF LC+IN
Sbjct: 601 IVRMLYGNGYSVKMEELILFLCHCKKYIEASKMLLFSLESHQAVDIDVCSAVIFHLCQIN 660
Query: 661 KLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLEEAEFVSKRME 709
KLSEAF LYYKLVEMGVHQQLSC NQLK SLEAG K EE EFVSKRME
Sbjct: 661 KLSEAFGLYYKLVEMGVHQQLSCLNQLKASLEAGGKFEEVEFVSKRME 708
BLAST of HG10013229 vs. TAIR 10
Match:
AT1G02060.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 819.7 bits (2116), Expect = 2.0e-237
Identity = 409/673 (60.77%), Postives = 528/673 (78.45%), Query Frame = 0
Query: 39 TETKSSTKTKKARGMAQMINSKPWSSDLESSLASLSPS--LSKTTVLQTLGFLRDPSKAL 98
T + STK+K AR +A+ +NS PWS +LESSL+SL PS +S+TTVLQTL ++ P+ L
Sbjct: 26 TNEERSTKSKLARSLARAVNSNPWSDELESSLSSLHPSQTISRTTVLQTLRLIKVPADGL 85
Query: 99 QFFNWAQEMGYAHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGVVKLEARFFNSLM 158
+FF+W G++H EQS+F MLE LGR R+LN ARNFLFSIE+RS G VKL+ R+FNSL+
Sbjct: 86 RFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLI 145
Query: 159 RNFSRAGLFQESIKLFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKNVYDEMLSTYGV 218
R++ AGLFQES+KLF MK G+SPSV+TFNSLL+ILLKRGRT MA +++DEM TYGV
Sbjct: 146 RSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGV 205
Query: 219 TPDTFTFNILIRGFCMNGMVDEGFRIFKDLSRFGCEPDVITYNTLVDGLCRAGKVTVAYN 278
TPD++TFN LI GFC N MVDE FRIFKD+ + C PDV+TYNT++DGLCRAGKV +A+N
Sbjct: 206 TPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHN 265
Query: 279 VVKGMGKKSVDLNPNVVTYTTLVRGYCAKREIDKALAAFEEMANQGLKANNITYNTLIKG 338
V+ GM KK+ D++PNVV+YTTLVRGYC K+EID+A+ F +M ++GLK N +TYNTLIKG
Sbjct: 266 VLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKG 325
Query: 339 LCEAQKFEKIKEILETTAGDG--TFSPDTCTFNTLMHCHCHAGNLDDALRVFERMTELKI 398
L EA ++++IK+IL D TF+PD CTFN L+ HC AG+LD A++VF+ M +K+
Sbjct: 326 LSEAHRYDEIKDIL-IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKL 385
Query: 399 RPDSATYSVLVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLAAAYNPIFKYLCENG 458
PDSA+YSVL+R+LC +++AE L ++L E+++LL D CKPLAAAYNP+F+YLC NG
Sbjct: 386 HPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANG 445
Query: 459 KTKKAEKVFRQLMRRGTQDPPSYKTLIMGHCNEGTFESGYELLVLMLRKDFLPDLEIYES 518
KTK+AEKVFRQLM+RG QDPPSYKTLI GHC EG F+ YELLVLMLR++F+PDLE YE
Sbjct: 446 KTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYEL 505
Query: 519 LINGLVHKDKPLLALQSLEKMLRSSHLPKSSTFHSILAKLLEQGSASESASLIQLMLDKN 578
LI+GL+ + LLA +L++MLRSS+LP ++TFHS+LA+L ++ A+ES L+ LML+K
Sbjct: 506 LIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKR 565
Query: 579 IRQNLSFSTGCVRLLFGARMNDKAFLIVRLLYENGYSVKMEELIHYLCHCKKVIEASKML 638
IRQN+ ST VRLLF + +KAFLIVRLLY+NGY VKMEEL+ YLC +K+++A ++
Sbjct: 566 IRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLV 625
Query: 639 LFSLESHQSVDMDVCNTVIFRLCEINKLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAG 698
LF LE Q VD+D CNTVI LC+ + SEAFSLY +LVE+G HQQLSC L+ +LEA
Sbjct: 626 LFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAA 685
Query: 699 EKLEEAEFVSKRM 708
K EE +FVSKRM
Sbjct: 686 GKWEELQFVSKRM 697
BLAST of HG10013229 vs. TAIR 10
Match:
AT2G37230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 358.2 bits (918), Expect = 1.7e-98
Identity = 221/687 (32.17%), Postives = 363/687 (52.84%), Query Frame = 0
Query: 36 LTKTET----------KSSTKTKKARGMAQMINSKPWSSDLESSLASLSPSLSKTTVLQT 95
LT TET K K + +M++++ W++ L++S+ L P + V
Sbjct: 64 LTSTETRPLRERFQRGKRQNHEKLEDTICRMMDNRAWTTRLQNSIRDLVPEWDHSLVYNV 123
Query: 96 LGFLRDPSKALQFFNWAQEMG-YAHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGV 155
L + ALQFF W + G H ++ M+++LG LN AR L + ++
Sbjct: 124 LHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKG--- 183
Query: 156 VKLEARFFNSLMRNFSRAGLFQESIKLFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAK 215
V + F L+ ++ +AG+ QES+K+F MK GV ++ ++NSL ++L+RGR MAK
Sbjct: 184 VPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAK 243
Query: 216 NVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGFRIFKDLSRFGCEPDVITYNTLVDG 275
+++M+S GV P T+N+++ GF ++ ++ R F+D+ G PD T+NT+++G
Sbjct: 244 RYFNKMVSE-GVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMING 303
Query: 276 LCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLVRGYCAKREIDKALAAFEEMANQGLK 335
CR K+ A + M K + P+VV+YTT+++GY A +D L FEEM + G++
Sbjct: 304 FCRFKKMDEAEKLFVEM--KGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIE 363
Query: 336 ANNITYNTLIKGLCEAQKFEKIKEILETTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALR 395
N TY+TL+ GLC+A K + K IL+ D F L+ AG++ A
Sbjct: 364 PNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATE 423
Query: 396 VFERMTELKIRPDSATYSVLVRSLCQGGHYEKAEDLLDKLLERKILL-SGDGCKPLAAAY 455
V + M L + ++ Y VL+ + C+ Y +A LLD L+E++I+L D + +AY
Sbjct: 424 VLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAY 483
Query: 456 NPIFKYLCENGKTKKAEKVFRQLMRRGTQDPPSYKTLIMGHCNEGTFESGYELLVLMLRK 515
NPI +YLC NG+T KAE +FRQLM+RG QD + LI GH EG +S YE+L +M R+
Sbjct: 484 NPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMSRR 543
Query: 516 DFLPDLEIYESLINGLVHKDKPLLALQSLEKMLRSSHLPKSSTFHSILAKLLEQGSASES 575
+ YE LI + K +P A +L+ M+ H+P SS F S++ L E G +
Sbjct: 544 GVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTA 603
Query: 576 ASLIQLMLDKN--IRQNLSFSTGCVRLLFGARMNDKAFLIVRLLYENGYSVKMEELIHYL 635
+ ++ +M+DKN I N+ + L ++A + LL +NG++ ++ L+ L
Sbjct: 604 SRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADLDSLLSVL 663
Query: 636 CHCKKVIEASKMLLFSLESHQSVDMDVCNTVIFRLCEINKLSEAFSLYYKLVEMGVHQQL 695
K I A K+L F LE S++ + V+ L K A+S+ K++E G
Sbjct: 664 SEKGKTIAALKLLDFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDW 723
Query: 696 SCQNQLKVSLEAGEKLEEAEFVSKRME 709
++L SL ++A+ +S+ ++
Sbjct: 724 KSSDELIKSLNQEGNTKQADVLSRMIK 744
BLAST of HG10013229 vs. TAIR 10
Match:
AT5G65560.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 221.9 bits (564), Expect = 1.9e-57
Identity = 177/650 (27.23%), Postives = 297/650 (45.69%), Query Frame = 0
Query: 57 INSKP-W--SSDLESSLASLSPSLSKTTVLQTLGFLRDPSKALQFFNW-AQEMGYAHTEQ 116
I SKP W S L+S ++++SPS V DP AL F +W +Q Y H+
Sbjct: 69 ILSKPNWHKSPSLKSMVSAISPS----HVSSLFSLDLDPKTALNFSHWISQNPRYKHSVY 128
Query: 117 SYFSMLEILGRNRHLNTARNFLFSIEKRSRGV----------------------VKLEAR 176
SY S+L +L N ++ + K V KL
Sbjct: 129 SYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIG 188
Query: 177 FFNSLMRNFSRAGLFQESIKLFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKNVYDEM 236
+N+L+ + +R GL E +++ M V P++ T+N ++ K G A N Y
Sbjct: 189 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEA-NQYVSK 248
Query: 237 LSTYGVTPDTFTFNILIRGFCMNGMVDEGFRIFKDLSRFGCEPDVITYNTLVDGLCRAGK 296
+ G+ PD FT+ LI G+C +D F++F ++ GC + + Y L+ GLC A +
Sbjct: 249 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 308
Query: 297 VTVAYNVVKGMGKKSVDLNPNVVTYTTLVRGYCAKREIDKALAAFEEMANQGLKANNITY 356
+ A ++ M K + P V TYT L++ C +AL +EM G+K N TY
Sbjct: 309 IDEAMDLFVKM--KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTY 368
Query: 357 NTLIKGLCEAQKFEKIKEILETTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALRVFERMT 416
LI LC KFEK +E+L G P+ T+N L++ +C G ++DA+ V E M
Sbjct: 369 TVLIDSLCSQCKFEKARELLGQMLEKG-LMPNVITYNALINGYCKRGMIEDAVDVVELME 428
Query: 417 ELKIRPDSATYSVLVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLAAAYNPIFKYL 476
K+ P++ TY+ L++ C+ + KA +L+K+LERK+L P YN +
Sbjct: 429 SRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVL-------PDVVTYNSLIDGQ 488
Query: 477 CENGKTKKAEKVFRQLMRRG-TQDPPSYKTLIMGHCNEGTFESGYELLVLMLRKDFLPDL 536
C +G A ++ + RG D +Y ++I C E +L + +K P++
Sbjct: 489 CRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNV 548
Query: 537 EIYESLINGLVHKDKPLLALQSLEKMLRSSHLPKSSTFHSILAKLLEQGSASESASLIQL 596
+Y +LI+G K A LEKML + LP S TF++++ L G E+ L +
Sbjct: 549 VMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEK 608
Query: 597 MLDKNIRQNLSFSTGCVRLLFGARMNDKAFLIVRLLYENGYSVKME---ELIHYLCHCKK 656
M+ ++ +S T + L D A+ + + +G I C +
Sbjct: 609 MVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGR 668
Query: 657 VIEASKMLLFSLESHQSVDMDVCNTVIFRLCEINKLSEAFSLYYKLVEMG 677
+++A M+ E+ S D+ +++I ++ + + AF + ++ + G
Sbjct: 669 LLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
BLAST of HG10013229 vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 212.6 bits (540), Expect = 1.1e-54
Identity = 120/372 (32.26%), Postives = 196/372 (52.69%), Query Frame = 0
Query: 152 FNSLMRNFSRAGLFQESIKLFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKNVYDEML 211
+NS++ + G +E++++ M + SP+ VT+N+L++ L K + A + +L
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL-ARVL 392
Query: 212 STYGVTPDTFTFNILIRGFCMNGMVDEGFRIFKDLSRFGCEPDVITYNTLVDGLCRAGKV 271
++ G+ PD TFN LI+G C+ +F+++ GCEPD TYN L+D LC GK+
Sbjct: 393 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 452
Query: 272 TVAYNVVKGMGKKSVDLNPNVVTYTTLVRGYCAKREIDKALAAFEEMANQGLKANNITYN 331
A N++K M + +V+TY TL+ G+C + +A F+EM G+ N++TYN
Sbjct: 453 DEALNMLKQM--ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYN 512
Query: 332 TLIKGLCEAQKFEKIKEILETTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALRVFERMTE 391
TLI GLC++++ E ++++ +G PD T+N+L+ C G++ A + + MT
Sbjct: 513 TLIDGLCKSRRVEDAAQLMDQMIMEGQ-KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 572
Query: 392 LKIRPDSATYSVLVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLAAAYNPIFKYLC 451
PD TY L+ LC+ G E A LL R I + G P AYNP+ + L
Sbjct: 573 NGCEPDIVTYGTLISGLCKAGRVEVASKLL-----RSIQMKGINLTP--HAYNPVIQGLF 632
Query: 452 ENGKTKKAEKVFRQLMRRGTQDPP--SYKTLIMGHCN-EGTFESGYELLVLMLRKDFLPD 511
KT +A +FR+++ + P SY+ + G CN G + LV +L K F+P+
Sbjct: 633 RKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 692
Query: 512 LEIYESLINGLV 521
L GL+
Sbjct: 693 FSSLYMLAEGLL 693
BLAST of HG10013229 vs. TAIR 10
Match:
AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 211.5 bits (537), Expect = 2.5e-54
Identity = 125/420 (29.76%), Postives = 225/420 (53.57%), Query Frame = 0
Query: 135 FSIEKRSRGVVKLEARFFNSLMRNFSRAGLFQESIKLFTIMKSHGVSPSVVTFNSLLTIL 194
F + + +R L+ +N+L++ + + G F +++ + M HG++PSV+T+ SL+ +
Sbjct: 296 FVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSM 355
Query: 195 LKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGFRIFKDLSRFGCEPD 254
K G N A D+M G+ P+ T+ L+ GF G ++E +R+ ++++ G P
Sbjct: 356 CKAGNMNRAMEFLDQM-RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPS 415
Query: 255 VITYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLVRGYCAKREIDKALAA 314
V+TYN L++G C GK+ A V++ M +K L+P+VV+Y+T++ G+C ++D+AL
Sbjct: 416 VVTYNALINGHCVTGKMEDAIAVLEDMKEKG--LSPDVVSYSTVLSGFCRSYDVDEALRV 475
Query: 315 FEEMANQGLKANNITYNTLIKGLCEAQKFEKIKEILETTAGDGTFSPDTCTFNTLMHCHC 374
EM +G+K + ITY++LI+G CE ++ ++ ++ E G PD T+ L++ +C
Sbjct: 476 KREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG-LPPDEFTYTALINAYC 535
Query: 375 HAGNLDDALRVFERMTELKIRPDSATYSVLVRSLCQGGHYEKAEDLLDKLLERKILLSG- 434
G+L+ AL++ M E + PD TYSVL+ L + +A+ LL KL + + S
Sbjct: 536 MEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDV 595
Query: 435 ------DGCKPLA-AAYNPIFKYLCENGKTKKAEKVFRQLMRRGTQ-DPPSYKTLIMGHC 494
+ C + + + K C G +A++VF ++ + + D +Y +I GHC
Sbjct: 596 TYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHC 655
Query: 495 NEGTFESGYELLVLMLRKDFLPDLEIYESLINGLVHKDKPLLALQS-LEKMLRSSHLPKS 545
G Y L M++ FL +L+ L HK+ + L S + +LRS L ++
Sbjct: 656 RAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKAL-HKEGKVNELNSVIVHVLRSCELSEA 710
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_008444214.1 | 0.0e+00 | 91.28 | PREDICTED: pentatricopeptide repeat-containing protein At1g02060, chloroplastic ... | [more] |
XP_031740077.1 | 0.0e+00 | 89.70 | pentatricopeptide repeat-containing protein At1g02060, chloroplastic [Cucumis sa... | [more] |
XP_038896237.1 | 0.0e+00 | 94.39 | LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g02060, chlo... | [more] |
XP_023539432.1 | 0.0e+00 | 88.14 | pentatricopeptide repeat-containing protein At1g02060, chloroplastic-like [Cucur... | [more] |
XP_022974264.1 | 0.0e+00 | 87.99 | pentatricopeptide repeat-containing protein At1g02060, chloroplastic-like [Cucur... | [more] |
Match Name | E-value | Identity | Description | |
O81908 | 2.9e-236 | 60.77 | Pentatricopeptide repeat-containing protein At1g02060, chloroplastic OS=Arabidop... | [more] |
Q9ZUU3 | 2.4e-97 | 32.17 | Pentatricopeptide repeat-containing protein At2g37230 OS=Arabidopsis thaliana OX... | [more] |
Q9LSL9 | 2.6e-56 | 27.23 | Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX... | [more] |
Q9LFF1 | 1.6e-53 | 32.26 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
Q9FIX3 | 3.6e-53 | 29.76 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3B9U6 | 0.0e+00 | 91.28 | pentatricopeptide repeat-containing protein At1g02060, chloroplastic OS=Cucumis ... | [more] |
A0A5A7UA48 | 0.0e+00 | 91.28 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A0A0KYI2 | 0.0e+00 | 89.70 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G358710 PE=4 SV=1 | [more] |
A0A6J1IH36 | 0.0e+00 | 87.99 | pentatricopeptide repeat-containing protein At1g02060, chloroplastic-like OS=Cuc... | [more] |
A0A6J1GE00 | 0.0e+00 | 87.57 | pentatricopeptide repeat-containing protein At1g02060, chloroplastic-like OS=Cuc... | [more] |
Match Name | E-value | Identity | Description | |
AT1G02060.1 | 2.0e-237 | 60.77 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G37230.1 | 1.7e-98 | 32.17 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G65560.1 | 1.9e-57 | 27.23 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G53700.1 | 1.1e-54 | 32.26 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G39710.1 | 2.5e-54 | 29.76 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |