HG10013039 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGCCATTCTTCCCCATTGATCCTCACTCCTTCCTATTTAGCTTGTCGCCATCGCCGCCGCCCTATTCGAGTTCACAGGCTCTTGAGGTGATTGATTTGATTTGATTTTCTTCTTCTTCGTTTTCTCTGATTCTGTTATTTACAGAGTTTGTGATTCGTTTTTTCAGGAGGATGAGATTCGCAAAGGAAGAGGTTGAGAAAGAAATGGAGATAAAGAATTTGAAACTGTACATGGAGAATCAAAGCATTATTGAAGAGAATGAGAGATTGAGAAAGAAAGCGTTTCTTCTTCATAAAGAGAATCAGGTTTTGTTATCTCAACTCCAGAATTTCTCCAACCATAAACCACCGCAGTCTATCTCCGATTTGAGTTCCTGCGGCTGGGAAATTAAACAAAATCATCTGTAA ATGTGCCATTCTTCCCCATTGATCCTCACTCCTTCCTATTTAGCTTGTCGCCATCGCCGCCGCCCTATTCGAGTTCACAGGCTCTTGAGGAGGATGAGATTCGCAAAGGAAGAGGTTGAGAAAGAAATGGAGATAAAGAATTTGAAACTGTACATGGAGAATCAAAGCATTATTGAAGAGAATGAGAGATTGAGAAAGAAAGCGTTTCTTCTTCATAAAGAGAATCAGGTTTTGTTATCTCAACTCCAGAATTTCTCCAACCATAAACCACCGCAGTCTATCTCCGATTTGAGTTCCTGCGGCTGGGAAATTAAACAAAATCATCTGTAA ATGTGCCATTCTTCCCCATTGATCCTCACTCCTTCCTATTTAGCTTGTCGCCATCGCCGCCGCCCTATTCGAGTTCACAGGCTCTTGAGGAGGATGAGATTCGCAAAGGAAGAGGTTGAGAAAGAAATGGAGATAAAGAATTTGAAACTGTACATGGAGAATCAAAGCATTATTGAAGAGAATGAGAGATTGAGAAAGAAAGCGTTTCTTCTTCATAAAGAGAATCAGGTTTTGTTATCTCAACTCCAGAATTTCTCCAACCATAAACCACCGCAGTCTATCTCCGATTTGAGTTCCTGCGGCTGGGAAATTAAACAAAATCATCTGTAA MCHSSPLILTPSYLACRHRRRPIRVHRLLRRMRFAKEEVEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSISDLSSCGWEIKQNHL Homology
BLAST of HG10013039 vs. NCBI nr
Match: XP_038901104.1 (protein LITTLE ZIPPER 1-like [Benincasa hispida]) HSP 1 Score: 187.2 bits (474), Expect = 7.6e-44 Identity = 97/109 (88.99%), Postives = 102/109 (93.58%), Query Frame = 0
BLAST of HG10013039 vs. NCBI nr
Match: KGN56585.1 (hypothetical protein Csa_011002 [Cucumis sativus]) HSP 1 Score: 176.0 bits (445), Expect = 1.7e-40 Identity = 95/115 (82.61%), Postives = 101/115 (87.83%), Query Frame = 0
BLAST of HG10013039 vs. NCBI nr
Match: XP_022924351.1 (protein LITTLE ZIPPER 1-like [Cucurbita moschata] >KAG6582570.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018954.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 134.4 bits (337), Expect = 5.8e-28 Identity = 81/104 (77.88%), Postives = 86/104 (82.69%), Query Frame = 0
BLAST of HG10013039 vs. NCBI nr
Match: XP_022980450.1 (protein LITTLE ZIPPER 1-like [Cucurbita maxima]) HSP 1 Score: 133.7 bits (335), Expect = 9.9e-28 Identity = 81/104 (77.88%), Postives = 86/104 (82.69%), Query Frame = 0
BLAST of HG10013039 vs. NCBI nr
Match: XP_023527865.1 (protein LITTLE ZIPPER 1-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 133.7 bits (335), Expect = 9.9e-28 Identity = 81/104 (77.88%), Postives = 86/104 (82.69%), Query Frame = 0
BLAST of HG10013039 vs. ExPASy Swiss-Prot
Match: F4IG60 (Protein LITTLE ZIPPER 1 OS=Arabidopsis thaliana OX=3702 GN=ZPR1 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.3e-09 Identity = 37/61 (60.66%), Postives = 48/61 (78.69%), Query Frame = 0
BLAST of HG10013039 vs. ExPASy Swiss-Prot
Match: Q9LZX5 (Protein LITTLE ZIPPER 2 OS=Arabidopsis thaliana OX=3702 GN=ZPR2 PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 1.8e-08 Identity = 35/60 (58.33%), Postives = 44/60 (73.33%), Query Frame = 0
BLAST of HG10013039 vs. ExPASy Swiss-Prot
Match: Q9LXI8 (Protein LITTLE ZIPPER 3 OS=Arabidopsis thaliana OX=3702 GN=ZPR3 PE=1 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 7.9e-04 Identity = 26/41 (63.41%), Postives = 33/41 (80.49%), Query Frame = 0
BLAST of HG10013039 vs. ExPASy Swiss-Prot
Match: Q56WL5 (Protein LITTLE ZIPPER 4 OS=Arabidopsis thaliana OX=3702 GN=ZPR4 PE=1 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 7.9e-04 Identity = 25/41 (60.98%), Postives = 33/41 (80.49%), Query Frame = 0
BLAST of HG10013039 vs. ExPASy TrEMBL
Match: A0A0A0L3S0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G125520 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 8.4e-41 Identity = 95/115 (82.61%), Postives = 101/115 (87.83%), Query Frame = 0
BLAST of HG10013039 vs. ExPASy TrEMBL
Match: A0A6J1E9A8 (protein LITTLE ZIPPER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431869 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 2.8e-28 Identity = 81/104 (77.88%), Postives = 86/104 (82.69%), Query Frame = 0
BLAST of HG10013039 vs. ExPASy TrEMBL
Match: A0A6J1IWC5 (protein LITTLE ZIPPER 1-like OS=Cucurbita maxima OX=3661 GN=LOC111479815 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 4.8e-28 Identity = 81/104 (77.88%), Postives = 86/104 (82.69%), Query Frame = 0
BLAST of HG10013039 vs. ExPASy TrEMBL
Match: A0A5D3D1P7 (Protein LITTLE ZIPPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004090 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 5.9e-26 Identity = 68/83 (81.93%), Postives = 72/83 (86.75%), Query Frame = 0
BLAST of HG10013039 vs. ExPASy TrEMBL
Match: A0A6J1IF90 (protein LITTLE ZIPPER 3-like OS=Cucurbita maxima OX=3661 GN=LOC111472719 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.9e-24 Identity = 75/103 (72.82%), Postives = 83/103 (80.58%), Query Frame = 0
BLAST of HG10013039 vs. TAIR 10
Match: AT2G45450.1 (protein binding ) HSP 1 Score: 63.9 bits (154), Expect = 9.0e-11 Identity = 37/61 (60.66%), Postives = 48/61 (78.69%), Query Frame = 0
BLAST of HG10013039 vs. TAIR 10
Match: AT3G60890.1 (protein binding ) HSP 1 Score: 60.1 bits (144), Expect = 1.3e-09 Identity = 35/60 (58.33%), Postives = 44/60 (73.33%), Query Frame = 0
BLAST of HG10013039 vs. TAIR 10
Match: AT3G60890.2 (protein binding ) HSP 1 Score: 57.0 bits (136), Expect = 1.1e-08 Identity = 33/53 (62.26%), Postives = 40/53 (75.47%), Query Frame = 0
BLAST of HG10013039 vs. TAIR 10
Match: AT3G52770.1 (protein binding ) HSP 1 Score: 44.7 bits (104), Expect = 5.6e-05 Identity = 26/41 (63.41%), Postives = 33/41 (80.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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