HG10013039 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10013039
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein LITTLE ZIPPER 1-like
LocationChr01: 26357124 .. 26357533 (-)
RNA-Seq ExpressionHG10013039
SyntenyHG10013039
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGCCATTCTTCCCCATTGATCCTCACTCCTTCCTATTTAGCTTGTCGCCATCGCCGCCGCCCTATTCGAGTTCACAGGCTCTTGAGGTGATTGATTTGATTTGATTTTCTTCTTCTTCGTTTTCTCTGATTCTGTTATTTACAGAGTTTGTGATTCGTTTTTTCAGGAGGATGAGATTCGCAAAGGAAGAGGTTGAGAAAGAAATGGAGATAAAGAATTTGAAACTGTACATGGAGAATCAAAGCATTATTGAAGAGAATGAGAGATTGAGAAAGAAAGCGTTTCTTCTTCATAAAGAGAATCAGGTTTTGTTATCTCAACTCCAGAATTTCTCCAACCATAAACCACCGCAGTCTATCTCCGATTTGAGTTCCTGCGGCTGGGAAATTAAACAAAATCATCTGTAA

mRNA sequence

ATGTGCCATTCTTCCCCATTGATCCTCACTCCTTCCTATTTAGCTTGTCGCCATCGCCGCCGCCCTATTCGAGTTCACAGGCTCTTGAGGAGGATGAGATTCGCAAAGGAAGAGGTTGAGAAAGAAATGGAGATAAAGAATTTGAAACTGTACATGGAGAATCAAAGCATTATTGAAGAGAATGAGAGATTGAGAAAGAAAGCGTTTCTTCTTCATAAAGAGAATCAGGTTTTGTTATCTCAACTCCAGAATTTCTCCAACCATAAACCACCGCAGTCTATCTCCGATTTGAGTTCCTGCGGCTGGGAAATTAAACAAAATCATCTGTAA

Coding sequence (CDS)

ATGTGCCATTCTTCCCCATTGATCCTCACTCCTTCCTATTTAGCTTGTCGCCATCGCCGCCGCCCTATTCGAGTTCACAGGCTCTTGAGGAGGATGAGATTCGCAAAGGAAGAGGTTGAGAAAGAAATGGAGATAAAGAATTTGAAACTGTACATGGAGAATCAAAGCATTATTGAAGAGAATGAGAGATTGAGAAAGAAAGCGTTTCTTCTTCATAAAGAGAATCAGGTTTTGTTATCTCAACTCCAGAATTTCTCCAACCATAAACCACCGCAGTCTATCTCCGATTTGAGTTCCTGCGGCTGGGAAATTAAACAAAATCATCTGTAA

Protein sequence

MCHSSPLILTPSYLACRHRRRPIRVHRLLRRMRFAKEEVEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSISDLSSCGWEIKQNHL
Homology
BLAST of HG10013039 vs. NCBI nr
Match: XP_038901104.1 (protein LITTLE ZIPPER 1-like [Benincasa hispida])

HSP 1 Score: 187.2 bits (474), Expect = 7.6e-44
Identity = 97/109 (88.99%), Postives = 102/109 (93.58%), Query Frame = 0

Query: 1   MCHSSPLILTPSYLACRHRRRPIRVHRLLRRMRFAKEEVEKEMEIKNLKLYMENQSIIEE 60
           MC SS LILTPSYLACRHRRRP+RV+RLLRRM+FAKEEVE+EMEIKNLKLYMENQSIIEE
Sbjct: 1   MCDSSRLILTPSYLACRHRRRPVRVYRLLRRMKFAKEEVEREMEIKNLKLYMENQSIIEE 60

Query: 61  NERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSISDLSSCGWEIKQNHL 110
           NERLRKKAFLLHKENQVLLS+LQNFSNHKP Q  SDLS CG EIKQNHL
Sbjct: 61  NERLRKKAFLLHKENQVLLSRLQNFSNHKPSQPSSDLSDCGREIKQNHL 109

BLAST of HG10013039 vs. NCBI nr
Match: KGN56585.1 (hypothetical protein Csa_011002 [Cucumis sativus])

HSP 1 Score: 176.0 bits (445), Expect = 1.7e-40
Identity = 95/115 (82.61%), Postives = 101/115 (87.83%), Query Frame = 0

Query: 1   MCHSSPLILTPSYLACR-HRRRPIRVHRLLRRMRFAKEE-----VEKEMEIKNLKLYMEN 60
           MCHSSP ILTPSYLACR  RRRP+RV+ LLRRMRFAKEE     V+ EMEIKNLKLYMEN
Sbjct: 1   MCHSSPFILTPSYLACRQRRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMEN 60

Query: 61  QSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSISDLSSCGWEIKQNHL 110
           QSIIEENERLRKKAFLLHKENQVLLSQLQNFS++KPP S SDLS+C WE KQNHL
Sbjct: 61  QSIIEENERLRKKAFLLHKENQVLLSQLQNFSHYKPPHSSSDLSACSWESKQNHL 115

BLAST of HG10013039 vs. NCBI nr
Match: XP_022924351.1 (protein LITTLE ZIPPER 1-like [Cucurbita moschata] >KAG6582570.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018954.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 134.4 bits (337), Expect = 5.8e-28
Identity = 81/104 (77.88%), Postives = 86/104 (82.69%), Query Frame = 0

Query: 1   MCHSSPLILTPSYLACRHRRRPIRVHRLLRRMRFAKEE-----VEKEMEIKNLKLYMENQ 60
           MC SS L LT S+L  RHRRRPIRV+RLLRRMRF KEE     V+ EMEIKNLKLYMENQ
Sbjct: 1   MCDSSRLNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQ 60

Query: 61  SIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSISDLSS 100
           SIIEENERLRKKAFLLHKENQVLLSQLQNFS  K PQ  S+LS+
Sbjct: 61  SIIEENERLRKKAFLLHKENQVLLSQLQNFSKQK-PQPSSNLSA 103

BLAST of HG10013039 vs. NCBI nr
Match: XP_022980450.1 (protein LITTLE ZIPPER 1-like [Cucurbita maxima])

HSP 1 Score: 133.7 bits (335), Expect = 9.9e-28
Identity = 81/104 (77.88%), Postives = 86/104 (82.69%), Query Frame = 0

Query: 1   MCHSSPLILTPSYLACRHRRRPIRVHRLLRRMRFAKEE-----VEKEMEIKNLKLYMENQ 60
           MC SS L LT S+L  RHRRRPIRV+RLLRRMRF KEE     V+ EMEIKNLKLYMENQ
Sbjct: 1   MCDSSRLNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQ 60

Query: 61  SIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSISDLSS 100
           SIIEENERLRKKAFLLHKENQVLLSQLQNFS  K PQ  S+LS+
Sbjct: 61  SIIEENERLRKKAFLLHKENQVLLSQLQNFSKQK-PQPGSNLSA 103

BLAST of HG10013039 vs. NCBI nr
Match: XP_023527865.1 (protein LITTLE ZIPPER 1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 133.7 bits (335), Expect = 9.9e-28
Identity = 81/104 (77.88%), Postives = 86/104 (82.69%), Query Frame = 0

Query: 1   MCHSSPLILTPSYLACRHRRRPIRVHRLLRRMRFAKEE-----VEKEMEIKNLKLYMENQ 60
           MC SS L LT S+L  RHRRRPIRV+RLLRRMRF KEE     V+ EMEIKNLKLYMENQ
Sbjct: 1   MCDSSRLNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQ 60

Query: 61  SIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSISDLSS 100
           SIIEENERLRKKAFLLHKENQVLLSQLQNFS  KP  S S+LS+
Sbjct: 61  SIIEENERLRKKAFLLHKENQVLLSQLQNFSKQKPLPS-SNLSA 103

BLAST of HG10013039 vs. ExPASy Swiss-Prot
Match: F4IG60 (Protein LITTLE ZIPPER 1 OS=Arabidopsis thaliana OX=3702 GN=ZPR1 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.3e-09
Identity = 37/61 (60.66%), Postives = 48/61 (78.69%), Query Frame = 0

Query: 23  IRVHRLLRRMRFAKEEVEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL 82
           +R+ RL RR R  +E  EK+ME+ NLKLY+ENQ+II ENE+L+KKA LLH+EN+ L S L
Sbjct: 69  VRIPRLSRRRRMWRE--EKKMEMINLKLYVENQNIIRENEKLKKKALLLHQENKTLFSLL 127

Query: 83  Q 84
           Q
Sbjct: 129 Q 127

BLAST of HG10013039 vs. ExPASy Swiss-Prot
Match: Q9LZX5 (Protein LITTLE ZIPPER 2 OS=Arabidopsis thaliana OX=3702 GN=ZPR2 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.8e-08
Identity = 35/60 (58.33%), Postives = 44/60 (73.33%), Query Frame = 0

Query: 23 IRVHRLLRRMRFAKEEVEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL 82
          +R+  L RR R  KE  +KEME++NLKL++ENQSII ENE L+KKA LLH EN  L + L
Sbjct: 35 LRILNLTRRRRLLKE--QKEMEMRNLKLFVENQSIIRENEALKKKALLLHHENNALFALL 92

BLAST of HG10013039 vs. ExPASy Swiss-Prot
Match: Q9LXI8 (Protein LITTLE ZIPPER 3 OS=Arabidopsis thaliana OX=3702 GN=ZPR3 PE=1 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 7.9e-04
Identity = 26/41 (63.41%), Postives = 33/41 (80.49%), Query Frame = 0

Query: 43 MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ 84
          ME  N KL++EN  I++ENERLRKKA LL++ENQ LL QL+
Sbjct: 1  MERLNSKLFVENCYIMKENERLRKKAELLNQENQQLLFQLK 41

BLAST of HG10013039 vs. ExPASy Swiss-Prot
Match: Q56WL5 (Protein LITTLE ZIPPER 4 OS=Arabidopsis thaliana OX=3702 GN=ZPR4 PE=1 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 7.9e-04
Identity = 25/41 (60.98%), Postives = 33/41 (80.49%), Query Frame = 0

Query: 43 MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ 84
          ME  N KLY++N  II+ENERLRKKA +L++ENQ LL +L+
Sbjct: 1  MERLNSKLYLQNCYIIKENERLRKKAQILNQENQQLLFELK 41

BLAST of HG10013039 vs. ExPASy TrEMBL
Match: A0A0A0L3S0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G125520 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 8.4e-41
Identity = 95/115 (82.61%), Postives = 101/115 (87.83%), Query Frame = 0

Query: 1   MCHSSPLILTPSYLACR-HRRRPIRVHRLLRRMRFAKEE-----VEKEMEIKNLKLYMEN 60
           MCHSSP ILTPSYLACR  RRRP+RV+ LLRRMRFAKEE     V+ EMEIKNLKLYMEN
Sbjct: 1   MCHSSPFILTPSYLACRQRRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMEN 60

Query: 61  QSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSISDLSSCGWEIKQNHL 110
           QSIIEENERLRKKAFLLHKENQVLLSQLQNFS++KPP S SDLS+C WE KQNHL
Sbjct: 61  QSIIEENERLRKKAFLLHKENQVLLSQLQNFSHYKPPHSSSDLSACSWESKQNHL 115

BLAST of HG10013039 vs. ExPASy TrEMBL
Match: A0A6J1E9A8 (protein LITTLE ZIPPER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431869 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.8e-28
Identity = 81/104 (77.88%), Postives = 86/104 (82.69%), Query Frame = 0

Query: 1   MCHSSPLILTPSYLACRHRRRPIRVHRLLRRMRFAKEE-----VEKEMEIKNLKLYMENQ 60
           MC SS L LT S+L  RHRRRPIRV+RLLRRMRF KEE     V+ EMEIKNLKLYMENQ
Sbjct: 1   MCDSSRLNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQ 60

Query: 61  SIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSISDLSS 100
           SIIEENERLRKKAFLLHKENQVLLSQLQNFS  K PQ  S+LS+
Sbjct: 61  SIIEENERLRKKAFLLHKENQVLLSQLQNFSKQK-PQPSSNLSA 103

BLAST of HG10013039 vs. ExPASy TrEMBL
Match: A0A6J1IWC5 (protein LITTLE ZIPPER 1-like OS=Cucurbita maxima OX=3661 GN=LOC111479815 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.8e-28
Identity = 81/104 (77.88%), Postives = 86/104 (82.69%), Query Frame = 0

Query: 1   MCHSSPLILTPSYLACRHRRRPIRVHRLLRRMRFAKEE-----VEKEMEIKNLKLYMENQ 60
           MC SS L LT S+L  RHRRRPIRV+RLLRRMRF KEE     V+ EMEIKNLKLYMENQ
Sbjct: 1   MCDSSRLNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQ 60

Query: 61  SIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSISDLSS 100
           SIIEENERLRKKAFLLHKENQVLLSQLQNFS  K PQ  S+LS+
Sbjct: 61  SIIEENERLRKKAFLLHKENQVLLSQLQNFSKQK-PQPGSNLSA 103

BLAST of HG10013039 vs. ExPASy TrEMBL
Match: A0A5D3D1P7 (Protein LITTLE ZIPPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004090 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 5.9e-26
Identity = 68/83 (81.93%), Postives = 72/83 (86.75%), Query Frame = 0

Query: 32  MRFAKEE-----VEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFS 91
           MRF  EE     V+ EMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFS
Sbjct: 1   MRFTTEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFS 60

Query: 92  NHKPPQSISDLSSCGWEIKQNHL 110
           ++KPPQS SDLS+C WE KQNHL
Sbjct: 61  DYKPPQSSSDLSACSWESKQNHL 83

BLAST of HG10013039 vs. ExPASy TrEMBL
Match: A0A6J1IF90 (protein LITTLE ZIPPER 3-like OS=Cucurbita maxima OX=3661 GN=LOC111472719 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.9e-24
Identity = 75/103 (72.82%), Postives = 83/103 (80.58%), Query Frame = 0

Query: 1   MCHSSPLIL---TPSYLACRHRRRPIRVHRLLRRMRFAKEE--VEKEMEIKNLKLYMENQ 60
           MC SS  +L   T S L CRHRRRPIR++RL RRM+FAK+   V++EMEI+NLKLYMENQ
Sbjct: 1   MCDSSRFMLLSFTRSSLRCRHRRRPIRLYRLFRRMKFAKDRTGVKEEMEIENLKLYMENQ 60

Query: 61  SIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSISDLS 99
           SIIEENERLRKKAFLLHKENQVLLSQLQ FS  K  Q  SDLS
Sbjct: 61  SIIEENERLRKKAFLLHKENQVLLSQLQIFSKRK-SQPNSDLS 102

BLAST of HG10013039 vs. TAIR 10
Match: AT2G45450.1 (protein binding )

HSP 1 Score: 63.9 bits (154), Expect = 9.0e-11
Identity = 37/61 (60.66%), Postives = 48/61 (78.69%), Query Frame = 0

Query: 23  IRVHRLLRRMRFAKEEVEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL 82
           +R+ RL RR R  +E  EK+ME+ NLKLY+ENQ+II ENE+L+KKA LLH+EN+ L S L
Sbjct: 69  VRIPRLSRRRRMWRE--EKKMEMINLKLYVENQNIIRENEKLKKKALLLHQENKTLFSLL 127

Query: 83  Q 84
           Q
Sbjct: 129 Q 127

BLAST of HG10013039 vs. TAIR 10
Match: AT3G60890.1 (protein binding )

HSP 1 Score: 60.1 bits (144), Expect = 1.3e-09
Identity = 35/60 (58.33%), Postives = 44/60 (73.33%), Query Frame = 0

Query: 23 IRVHRLLRRMRFAKEEVEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL 82
          +R+  L RR R  KE  +KEME++NLKL++ENQSII ENE L+KKA LLH EN  L + L
Sbjct: 35 LRILNLTRRRRLLKE--QKEMEMRNLKLFVENQSIIRENEALKKKALLLHHENNALFALL 92

BLAST of HG10013039 vs. TAIR 10
Match: AT3G60890.2 (protein binding )

HSP 1 Score: 57.0 bits (136), Expect = 1.1e-08
Identity = 33/53 (62.26%), Postives = 40/53 (75.47%), Query Frame = 0

Query: 30 RRMRFAKEEVEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL 83
          RR R  KE  +KEME++NLKL++ENQSII ENE L+KKA LLH EN  L + L
Sbjct: 43 RRRRLLKE--QKEMEMRNLKLFVENQSIIRENEALKKKALLLHHENNALFALL 93

BLAST of HG10013039 vs. TAIR 10
Match: AT3G52770.1 (protein binding )

HSP 1 Score: 44.7 bits (104), Expect = 5.6e-05
Identity = 26/41 (63.41%), Postives = 33/41 (80.49%), Query Frame = 0

Query: 43 MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ 84
          ME  N KL++EN  I++ENERLRKKA LL++ENQ LL QL+
Sbjct: 1  MERLNSKLFVENCYIMKENERLRKKAELLNQENQQLLFQLK 41

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038901104.17.6e-4488.99protein LITTLE ZIPPER 1-like [Benincasa hispida][more]
KGN56585.11.7e-4082.61hypothetical protein Csa_011002 [Cucumis sativus][more]
XP_022924351.15.8e-2877.88protein LITTLE ZIPPER 1-like [Cucurbita moschata] >KAG6582570.1 Protein LITTLE Z... [more]
XP_022980450.19.9e-2877.88protein LITTLE ZIPPER 1-like [Cucurbita maxima][more]
XP_023527865.19.9e-2877.88protein LITTLE ZIPPER 1-like isoform X2 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
F4IG601.3e-0960.66Protein LITTLE ZIPPER 1 OS=Arabidopsis thaliana OX=3702 GN=ZPR1 PE=1 SV=1[more]
Q9LZX51.8e-0858.33Protein LITTLE ZIPPER 2 OS=Arabidopsis thaliana OX=3702 GN=ZPR2 PE=1 SV=1[more]
Q9LXI87.9e-0463.41Protein LITTLE ZIPPER 3 OS=Arabidopsis thaliana OX=3702 GN=ZPR3 PE=1 SV=1[more]
Q56WL57.9e-0460.98Protein LITTLE ZIPPER 4 OS=Arabidopsis thaliana OX=3702 GN=ZPR4 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0L3S08.4e-4182.61Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G125520 PE=4 SV=1[more]
A0A6J1E9A82.8e-2877.88protein LITTLE ZIPPER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431869 PE=4 ... [more]
A0A6J1IWC54.8e-2877.88protein LITTLE ZIPPER 1-like OS=Cucurbita maxima OX=3661 GN=LOC111479815 PE=4 SV... [more]
A0A5D3D1P75.9e-2681.93Protein LITTLE ZIPPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A6J1IF901.9e-2472.82protein LITTLE ZIPPER 3-like OS=Cucurbita maxima OX=3661 GN=LOC111472719 PE=4 SV... [more]
Match NameE-valueIdentityDescription
AT2G45450.19.0e-1160.66protein binding [more]
AT3G60890.11.3e-0958.33protein binding [more]
AT3G60890.21.1e-0862.26protein binding [more]
AT3G52770.15.6e-0563.41protein binding [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039312Protein LITTLE ZIPPERPANTHERPTHR33601PROTEIN LITTLE ZIPPER 4coord: 1..89
NoneNo IPR availablePANTHERPTHR33601:SF22PROTEIN LITTLE ZIPPER 1coord: 1..89

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10013039.1HG10013039.1mRNA