Homology
BLAST of HG10012837 vs. NCBI nr
Match:
XP_038880033.1 (pentatricopeptide repeat-containing protein At4g33170-like [Benincasa hispida])
HSP 1 Score: 1060.8 bits (2742), Expect = 4.1e-306
Identity = 532/583 (91.25%), Postives = 551/583 (94.51%), Query Frame = 0
Query: 1 MNDFFDSDPTPPPAPPMATVTTAASKLDPRIVHAQAIKSPATDCSVYNNLITRYSKSNLL 60
MNDFFDSDPTPPPA MA TTA +K DPRI HAQAIKSPATD SVYN+LIT YSKSNLL
Sbjct: 1 MNDFFDSDPTPPPALSMAATTTAVAKSDPRIRHAQAIKSPATDRSVYNSLITLYSKSNLL 60
Query: 61 HYSVRLFDQIPFPNVVSWTAFISAHSNTFLSLRHFVSMLRYPAFPNQRTLASLFKTCASL 120
HYSVRLFDQIPFP+VVSWTAFISAHSNTFLSLRHFVSMLRYP FPNQRTLASLFKTC SL
Sbjct: 61 HYSVRLFDQIPFPSVVSWTAFISAHSNTFLSLRHFVSMLRYPVFPNQRTLASLFKTCVSL 120
Query: 121 PSISFGLALHSLAHKLSLCYEPYSGSALVNFYFKCRLFDDARKVFDEISDRDEVCYSALV 180
+SFGL+LHSLAHKLSLC EPYSGSALVNFY KCRL DDARKVFDEISDRDEVCYSALV
Sbjct: 121 SCVSFGLSLHSLAHKLSLCSEPYSGSALVNFYSKCRLLDDARKVFDEISDRDEVCYSALV 180
Query: 181 VGLAQNAQSIDALSMFREMKASDVGSTLYSVSGALRATADLAALEQCRVLHAHAVVTGLD 240
VGLAQNAQSI ALSMFREMKASDV ST+ SVSGALRATADLA LEQCRVLHAHAVVTGLD
Sbjct: 181 VGLAQNAQSIAALSMFREMKASDVASTMQSVSGALRATADLATLEQCRVLHAHAVVTGLD 240
Query: 241 TDVIVQTALIDGYGKSGLIIDARQVFDENLGCMNVVGWNAMLASYAQQGDKNSTLELFNS 300
TDVIVQT+LIDGYGKSGLIIDARQVFDENLGCMNVVGWNAMLASYAQQGDKNSTL LFNS
Sbjct: 241 TDVIVQTSLIDGYGKSGLIIDARQVFDENLGCMNVVGWNAMLASYAQQGDKNSTLLLFNS 300
Query: 301 MEVFGMSPDEYSFLAILTSFCNSRLVSEIELWLRRMRVEYGVEPTLEHFTCLIDAMGRAG 360
M+ FGMSPDEYSFLAILTS C+S LVSEIELWLRRMRVEYGVEPTLEHFTCLIDAMGR G
Sbjct: 301 MQAFGMSPDEYSFLAILTSLCSSSLVSEIELWLRRMRVEYGVEPTLEHFTCLIDAMGRVG 360
Query: 361 KLKEAERVAMTMPFVPDAAVWRALLSSSASHGAGDMAWTMAKRLLELDQHDDSAYVIVAN 420
KLKEAERVAMTMPFVPDAAVWRALLSSSASHGAGDMAWTMAKRLLE++Q DDSAYVIVAN
Sbjct: 361 KLKEAERVAMTMPFVPDAAVWRALLSSSASHGAGDMAWTMAKRLLEINQRDDSAYVIVAN 420
Query: 421 ALSATGRWEEVAVVRKLMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERIVEIYAKLKE 480
ALSAT RWEEVA VRKLMKER+VKKKSGRSWIEVRGEVHVFLAGDRNHER EIY KL+E
Sbjct: 421 ALSATERWEEVAEVRKLMKERKVKKKSGRSWIEVRGEVHVFLAGDRNHERNEEIYGKLRE 480
Query: 481 LIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYGMLTGVAPPGKALRIVKNL 540
L+WE+EKLGYVPIWDEML EVGEKEKKEALWYHSEKLALAYGMLTGVAPPGKALRIVKNL
Sbjct: 481 LMWEVEKLGYVPIWDEMLQEVGEKEKKEALWYHSEKLALAYGMLTGVAPPGKALRIVKNL 540
Query: 541 KICRDCHQVFKYASRVLKREIIVRDVNRYHRFSNGSCSCEDIW 584
+ICRDCHQVFKYASRVLKREIIVRD+NRYHRFSNGSC+C+DIW
Sbjct: 541 RICRDCHQVFKYASRVLKREIIVRDINRYHRFSNGSCTCKDIW 583
BLAST of HG10012837 vs. NCBI nr
Match:
XP_022974509.1 (pentatricopeptide repeat-containing protein At4g33170-like [Cucurbita maxima])
HSP 1 Score: 1038.1 bits (2683), Expect = 2.9e-299
Identity = 514/583 (88.16%), Postives = 542/583 (92.97%), Query Frame = 0
Query: 1 MNDFFDSDPTPPPAPPMATVTTAASKLDPRIVHAQAIKSPATDCSVYNNLITRYSKSNLL 60
MND FD DP PP APP+A T AA K DPRI+HAQAIKSPATD SVYNNLIT Y K+NLL
Sbjct: 1 MNDLFDPDPIPPRAPPLAAATAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANLL 60
Query: 61 HYSVRLFDQIPFPNVVSWTAFISAHSNTFLSLRHFVSMLRYPAFPNQRTLASLFKTCASL 120
HYSVRLFDQIP PNVVSWTA ISAHSNTFL+LRHFVSMLRYP+FPNQRTLASLFKTCASL
Sbjct: 61 HYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCASL 120
Query: 121 PSISFGLALHSLAHKLSLCYEPYSGSALVNFYFKCRLFDDARKVFDEISDRDEVCYSALV 180
P +SFGL+LHSLAHKLSLC EP+ GSALVNFY K LFDDARKVFDEISD DEVCYSALV
Sbjct: 121 PCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSALV 180
Query: 181 VGLAQNAQSIDALSMFREMKASDVGSTLYSVSGALRATADLAALEQCRVLHAHAVVTGLD 240
VGLAQNAQSIDALSMFREMKAS+V ST+YSVSGALRA ADLAALEQCRVLH HAV TGLD
Sbjct: 181 VGLAQNAQSIDALSMFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVSTGLD 240
Query: 241 TDVIVQTALIDGYGKSGLIIDARQVFDENLGCMNVVGWNAMLASYAQQGDKNSTLELFNS 300
TDVIVQTALIDGYGKSGLIIDARQVF+E+LGCMNVVGWNAMLASYAQQGDKNSTLELFNS
Sbjct: 241 TDVIVQTALIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFNS 300
Query: 301 MEVFGMSPDEYSFLAILTSFCNSRLVSEIELWLRRMRVEYGVEPTLEHFTCLIDAMGRAG 360
M FG+ PDEY+FLAILTS+CNSRLV EIELWLRRMRVEYGV+PTLEHFTCLIDAMGR G
Sbjct: 301 MGSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRDG 360
Query: 361 KLKEAERVAMTMPFVPDAAVWRALLSSSASHGAGDMAWTMAKRLLELDQHDDSAYVIVAN 420
KL+EAER+AMTMPFVPDAAVWRALLSSSASHGAGDMAW MAKRLLEL+ HDDSAYVIVAN
Sbjct: 361 KLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVAN 420
Query: 421 ALSATGRWEEVAVVRKLMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERIVEIYAKLKE 480
ALS+T RWEEVA+VRK+MKERQVKKKSGRSWIEVRGEVHVFLAGDRNHER EIYAKL+
Sbjct: 421 ALSSTARWEEVAIVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLRN 480
Query: 481 LIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYGMLTGVAPPGKALRIVKNL 540
LIWEIEKLGYVPIW EMLHEVGEKEKKEALWYHSEKLALAYG+L G APPGKALRIVKNL
Sbjct: 481 LIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKNL 540
Query: 541 KICRDCHQVFKYASRVLKREIIVRDVNRYHRFSNGSCSCEDIW 584
+ICRDCHQVFKYASRVL+REI+VRDVNRYHRF NGSC+C DIW
Sbjct: 541 RICRDCHQVFKYASRVLRREIVVRDVNRYHRFLNGSCTCGDIW 583
BLAST of HG10012837 vs. NCBI nr
Match:
XP_022947552.1 (pentatricopeptide repeat-containing protein At4g33170-like [Cucurbita moschata])
HSP 1 Score: 1034.2 bits (2673), Expect = 4.1e-298
Identity = 513/583 (87.99%), Postives = 541/583 (92.80%), Query Frame = 0
Query: 1 MNDFFDSDPTPPPAPPMATVTTAASKLDPRIVHAQAIKSPATDCSVYNNLITRYSKSNLL 60
MND FDSDP PP APP+A T AA K DPRI+HAQAIKSPATD SVYNNLIT Y K+NLL
Sbjct: 1 MNDLFDSDPIPPRAPPLAAATAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANLL 60
Query: 61 HYSVRLFDQIPFPNVVSWTAFISAHSNTFLSLRHFVSMLRYPAFPNQRTLASLFKTCASL 120
HYSVRLFDQIP PNVVSWTA ISAHSNTFL+LRHFVSMLRYP+FPNQRTLASL KTCASL
Sbjct: 61 HYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLLKTCASL 120
Query: 121 PSISFGLALHSLAHKLSLCYEPYSGSALVNFYFKCRLFDDARKVFDEISDRDEVCYSALV 180
P +SFGL+LHSLAHKLSLC EP+ GSALVNFY K LFDDARKVFDEISD DEVCYSALV
Sbjct: 121 PCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSALV 180
Query: 181 VGLAQNAQSIDALSMFREMKASDVGSTLYSVSGALRATADLAALEQCRVLHAHAVVTGLD 240
VGLAQNAQSIDALS+FREMKASDV ST+YSVSGALRA ADLAALEQCRVLH HAVV GLD
Sbjct: 181 VGLAQNAQSIDALSVFREMKASDVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGLD 240
Query: 241 TDVIVQTALIDGYGKSGLIIDARQVFDENLGCMNVVGWNAMLASYAQQGDKNSTLELFNS 300
TDVIVQT+LIDGYGKSGLIIDARQVF+E+LGCMNVVGWNAMLASYAQQGDKNSTLELFNS
Sbjct: 241 TDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFNS 300
Query: 301 MEVFGMSPDEYSFLAILTSFCNSRLVSEIELWLRRMRVEYGVEPTLEHFTCLIDAMGRAG 360
M FG+ PDEY+FLAILTS+CNSRLV EIELWLRRM VEYGV+PTLEH+TCLIDAMGRAG
Sbjct: 301 MVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMGVEYGVQPTLEHYTCLIDAMGRAG 360
Query: 361 KLKEAERVAMTMPFVPDAAVWRALLSSSASHGAGDMAWTMAKRLLELDQHDDSAYVIVAN 420
KL+EAER+AMTMPFVPDAAVWRALLSSSASHGAGDMAW MAKRLLEL+ HDDSAYVIVAN
Sbjct: 361 KLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVAN 420
Query: 421 ALSATGRWEEVAVVRKLMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERIVEIYAKLKE 480
ALS+T RWEEVAVVRK+MKERQVKKKSGRSWIEVRGEVHVFLAGDRNHER EIYAKL+
Sbjct: 421 ALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLRN 480
Query: 481 LIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYGMLTGVAPPGKALRIVKNL 540
LIWEIEKLGYVPIW EMLHEVGEKEKKEALWYHSEKLALAYG+L G APPGKALRIVKNL
Sbjct: 481 LIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKNL 540
Query: 541 KICRDCHQVFKYASRVLKREIIVRDVNRYHRFSNGSCSCEDIW 584
+ICRDCHQVFKYASRVL REI+VRDVNRYHRF NGSC+C DIW
Sbjct: 541 RICRDCHQVFKYASRVLGREIVVRDVNRYHRFLNGSCTCGDIW 583
BLAST of HG10012837 vs. NCBI nr
Match:
KAG6597338.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1034.2 bits (2673), Expect = 4.1e-298
Identity = 515/584 (88.18%), Postives = 543/584 (92.98%), Query Frame = 0
Query: 1 MNDFFDSDPTPPPAPPMATVTTAAS-KLDPRIVHAQAIKSPATDCSVYNNLITRYSKSNL 60
MND FDSDP PP APP+A T AA+ K DPRI+HAQAIKSPATD SVYNNLIT Y K+NL
Sbjct: 1 MNDLFDSDPIPPRAPPLAAATVAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANL 60
Query: 61 LHYSVRLFDQIPFPNVVSWTAFISAHSNTFLSLRHFVSMLRYPAFPNQRTLASLFKTCAS 120
LHYSVRLFDQIP PNVVSWTA ISAHSNTFL+LRHFVSMLRYP+FPNQRTLASLFKTCAS
Sbjct: 61 LHYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCAS 120
Query: 121 LPSISFGLALHSLAHKLSLCYEPYSGSALVNFYFKCRLFDDARKVFDEISDRDEVCYSAL 180
LP +SFGL+LHSLAHKLSLC EP+ GSALVNFY K LFDDARKVFDEISD DEVCYSAL
Sbjct: 121 LPCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSAL 180
Query: 181 VVGLAQNAQSIDALSMFREMKASDVGSTLYSVSGALRATADLAALEQCRVLHAHAVVTGL 240
VVGLAQNAQSIDALS+FREMKAS+V ST+YSVSGALRA ADLAALEQCRVLH HAVV GL
Sbjct: 181 VVGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGL 240
Query: 241 DTDVIVQTALIDGYGKSGLIIDARQVFDENLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
DTDVIVQTALIDGYGKSGLIIDARQVF+E+LGCMNVVGWNAMLASYAQQGDKNSTLELFN
Sbjct: 241 DTDVIVQTALIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFN 300
Query: 301 SMEVFGMSPDEYSFLAILTSFCNSRLVSEIELWLRRMRVEYGVEPTLEHFTCLIDAMGRA 360
SM FG+ PDEY+FLAILTS+CNSRLV EIELWLRRMRVEYGV+PTLEHFTCLIDAMGRA
Sbjct: 301 SMVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRA 360
Query: 361 GKLKEAERVAMTMPFVPDAAVWRALLSSSASHGAGDMAWTMAKRLLELDQHDDSAYVIVA 420
GKL+EAER+AMTMPFVPDAAVWRALLSSSASHGAGDMAW MAKRLLEL+ HDDSAYVIVA
Sbjct: 361 GKLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVA 420
Query: 421 NALSATGRWEEVAVVRKLMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERIVEIYAKLK 480
NALS+T RWEEVAVVRK+MKERQVKKKSGRSWIEVRGEVHVFLAGDRNHER EIYAKL+
Sbjct: 421 NALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLR 480
Query: 481 ELIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYGMLTGVAPPGKALRIVKN 540
LIWEIEKLGYVPIW EMLHEVGEKEKKEALWYHSEKLALAYG+L G APPGKALRIVKN
Sbjct: 481 NLIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKN 540
Query: 541 LKICRDCHQVFKYASRVLKREIIVRDVNRYHRFSNGSCSCEDIW 584
L+ICRDCHQVFKYASRVL REI+ RDVNRYHRF NGSC+C DIW
Sbjct: 541 LRICRDCHQVFKYASRVLGREIVARDVNRYHRFLNGSCTCGDIW 584
BLAST of HG10012837 vs. NCBI nr
Match:
XP_023540846.1 (pentatricopeptide repeat-containing protein At4g33170-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1030.8 bits (2664), Expect = 4.6e-297
Identity = 511/583 (87.65%), Postives = 540/583 (92.62%), Query Frame = 0
Query: 1 MNDFFDSDPTPPPAPPMATVTTAASKLDPRIVHAQAIKSPATDCSVYNNLITRYSKSNLL 60
MND FD DP PP APP+A T AA K DPRI+HAQAIKSPATD SVYNNLIT Y ++NLL
Sbjct: 1 MNDLFDPDPIPPRAPPLAAATAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGRANLL 60
Query: 61 HYSVRLFDQIPFPNVVSWTAFISAHSNTFLSLRHFVSMLRYPAFPNQRTLASLFKTCASL 120
HYSVRLFDQIP PNVVSWTA ISAHSNTFL+LRHFVSMLR P+FPNQRTLASLFKTCASL
Sbjct: 61 HYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRCPSFPNQRTLASLFKTCASL 120
Query: 121 PSISFGLALHSLAHKLSLCYEPYSGSALVNFYFKCRLFDDARKVFDEISDRDEVCYSALV 180
P +SFGL+LHSLAHKLSLC EP+ GSALVNFY K LFDDARKVFDEISD DEVCYSALV
Sbjct: 121 PCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSALV 180
Query: 181 VGLAQNAQSIDALSMFREMKASDVGSTLYSVSGALRATADLAALEQCRVLHAHAVVTGLD 240
VGLAQNAQSIDALS+FREMKAS+V ST+YSVSGALRA ADLAALEQCRVLH HAVV GLD
Sbjct: 181 VGLAQNAQSIDALSVFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGLD 240
Query: 241 TDVIVQTALIDGYGKSGLIIDARQVFDENLGCMNVVGWNAMLASYAQQGDKNSTLELFNS 300
TDVIVQT+LIDGYGKSGLIIDARQVF+E+LGCMNVVGWNAMLASYAQQGDKNSTLELFNS
Sbjct: 241 TDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFNS 300
Query: 301 MEVFGMSPDEYSFLAILTSFCNSRLVSEIELWLRRMRVEYGVEPTLEHFTCLIDAMGRAG 360
M FG+ PDEY+FLAILTS+CNSRLV EIELWLRRMRVEYGV+PTLEHFTCLIDAMGRAG
Sbjct: 301 MVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRAG 360
Query: 361 KLKEAERVAMTMPFVPDAAVWRALLSSSASHGAGDMAWTMAKRLLELDQHDDSAYVIVAN 420
KL+EAER+AMTMPFVPDAAVWRALLSSSASHGAGDMAW MAKRLLEL+ HDDSAYVIVAN
Sbjct: 361 KLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVAN 420
Query: 421 ALSATGRWEEVAVVRKLMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERIVEIYAKLKE 480
ALS+T RWEEVAVVRK+MKERQVKKKSGRSWIEVRGEVH FLAGDRNHER EIYAKL+
Sbjct: 421 ALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHAFLAGDRNHERTEEIYAKLRN 480
Query: 481 LIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYGMLTGVAPPGKALRIVKNL 540
LIWEIEKLGYVPIW EMLHEVGEKEKKEALWYHSEKLALAYG+L G APPGKALRIVKNL
Sbjct: 481 LIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKNL 540
Query: 541 KICRDCHQVFKYASRVLKREIIVRDVNRYHRFSNGSCSCEDIW 584
+ICRDCHQVFKYASRVL REI+VRDVNRYHRF NGSC+C DIW
Sbjct: 541 RICRDCHQVFKYASRVLGREIVVRDVNRYHRFLNGSCTCGDIW 583
BLAST of HG10012837 vs. ExPASy Swiss-Prot
Match:
Q9SMZ2 (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)
HSP 1 Score: 386.7 bits (992), Expect = 4.6e-106
Identity = 214/581 (36.83%), Postives = 349/581 (60.07%), Query Frame = 0
Query: 12 PPAPPMATVTTAASKLDPRI-----VHAQAIK-SPATDCSVYNNLITRYSKSNLLHYSVR 71
P M +V AAS L + VH AIK + +D V LI YS++ + +
Sbjct: 414 PDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEI 473
Query: 72 LFDQIPFPNVVSWTAFISAHSNT---FLSLRHFVSMLRYPAFPNQRTLASLFKTCASLPS 131
LF++ F ++V+W A ++ ++ + +L+ F M + + TLA++FKTC L +
Sbjct: 474 LFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFA 533
Query: 132 ISFGLALHSLAHKLSLCYEPYSGSALVNFYFKCRLFDDARKVFDEISDRDEVCYSALVVG 191
I+ G +H+ A K + + S +++ Y KC A+ FD I D+V ++ ++ G
Sbjct: 534 INQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISG 593
Query: 192 LAQNAQSIDALSMFREMKASDVGSTLYSVSGALRATADLAALEQCRVLHAHAVVTGLDTD 251
+N + A +F +M+ V ++++ +A++ L ALEQ R +HA+A+ D
Sbjct: 594 CIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTND 653
Query: 252 VIVQTALIDGYGKSGLIIDARQVFDENLGCMNVVGWNAMLASYAQQGDKNSTLELFNSME 311
V T+L+D Y K G I DA +F + + MN+ WNAML AQ G+ TL+LF M+
Sbjct: 654 PFVGTSLVDMYAKCGSIDDAYCLF-KRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMK 713
Query: 312 VFGMSPDEYSFLAILTSFCNSRLVSEIELWLRRMRVEYGVEPTLEHFTCLIDAMGRAGKL 371
G+ PD+ +F+ +L++ +S LVSE +R M +YG++P +EH++CL DA+GRAG +
Sbjct: 714 SLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLV 773
Query: 372 KEAERVAMTMPFVPDAAVWRALLSSSASHGAGDMAWTMAKRLLELDQHDDSAYVIVANAL 431
K+AE + +M A+++R LL++ G + +A +LLEL+ D SAYV+++N
Sbjct: 774 KQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMY 833
Query: 432 SATGRWEEVAVVRKLMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERIVEIYAKLKELI 491
+A +W+E+ + R +MK +VKK G SWIEV+ ++H+F+ DR++ + IY K+K++I
Sbjct: 834 AAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMI 893
Query: 492 WEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYGMLTGVAPPGKALRIVKNLKI 551
+I++ GYVP D L +V E+EK+ AL+YHSEKLA+A+G+L+ PP +R++KNL++
Sbjct: 894 RDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLS--TPPSTPIRVIKNLRV 953
Query: 552 CRDCHQVFKYASRVLKREIIVRDVNRYHRFSNGSCSCEDIW 584
C DCH KY ++V REI++RD NR+HRF +G CSC D W
Sbjct: 954 CGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
BLAST of HG10012837 vs. ExPASy Swiss-Prot
Match:
Q9LTF4 (Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H52 PE=3 SV=1)
HSP 1 Score: 362.5 bits (929), Expect = 9.2e-99
Identity = 205/541 (37.89%), Postives = 312/541 (57.67%), Query Frame = 0
Query: 46 VYNNLITRYSKSNLLHYSVRLFDQIPFPNVVSWTAFISAHSNT---FLSLRHFVSMLRYP 105
V NNLI YSKS L S R F+ P + +W++ IS + ++SL M+
Sbjct: 52 VANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGN 111
Query: 106 AFPNQRTLASLFKTCASLPSISFGLALHSLAHKLSLCYEPYSGSALVNFYFKCRLFDDAR 165
P+ L S K+CA L G ++H L+ K + + GS+LV+ Y KC AR
Sbjct: 112 LRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYAR 171
Query: 166 KVFDEISDRDEVCYSALVVGLAQNAQSIDALSMFREMKASDVGSTLYSVSGALRATADLA 225
K+FDE+ R+ V +S ++ G AQ ++ +AL +F+E ++ YS S + A+
Sbjct: 172 KMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANST 231
Query: 226 ALEQCRVLHAHAVVTGLDTDVIVQTALIDGYGKSGLIIDARQVFDENLGCMNVVGWNAML 285
LE R +H ++ + D+ V ++L+ Y K G+ A QVF+E + N+ WNAML
Sbjct: 232 LLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNE-VPVKNLGIWNAML 291
Query: 286 ASYAQQGDKNSTLELFNSMEVFGMSPDEYSFLAILTSFCNSRLVSEIELWLRRMRVEYGV 345
+YAQ +ELF M++ GM P+ +FL +L + ++ LV E + +M+ E +
Sbjct: 292 KAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMK-ESRI 351
Query: 346 EPTLEHFTCLIDAMGRAGKLKEAERVAMTMPFVPDAAVWRALLSSSASHGAGDMAWTMAK 405
EPT +H+ L+D +GRAG+L+EA V MP P +VW ALL+S H ++A A
Sbjct: 352 EPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAAD 411
Query: 406 RLLELDQHDDSAYVIVANALSATGRWEEVAVVRKLMKERQVKKKSGRSWIEVRGEVHVFL 465
++ EL ++ ++NA +A GR+E+ A RKL+++R KK++G SW+E R +VH F
Sbjct: 412 KVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFA 471
Query: 466 AGDRNHERIVEIYAKLKELIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYG 525
AG+R HE+ EIY KL EL E+EK GY+ +L EV EK + + YHSE+LA+A+G
Sbjct: 472 AGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFG 531
Query: 526 MLTGVAPPGKALRIVKNLKICRDCHQVFKYASRVLKREIIVRDVNRYHRFSNGSCSCEDI 584
++T P + +R++KNL++C DCH K+ S +R IIVRD NR+HRF +G CSC D
Sbjct: 532 LIT--FPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDY 588
BLAST of HG10012837 vs. ExPASy Swiss-Prot
Match:
Q9LIQ7 (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)
HSP 1 Score: 360.1 bits (923), Expect = 4.6e-98
Identity = 205/558 (36.74%), Postives = 317/558 (56.81%), Query Frame = 0
Query: 30 RIVHAQAIKSP-ATDCSVYNNLITRYSKSNLLHYSVRLFDQIPFPNVVSWTAFISA---H 89
RIVHA ++S D + N L+ Y+K L + ++F+++P + V+WT IS H
Sbjct: 80 RIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQH 139
Query: 90 SNTFLSLRHFVSMLRYPAFPNQRTLASLFKTCASLPSISFGLALHSLAHKLSLCYEPYSG 149
+L F MLR+ PN+ TL+S+ K A+ G LH K + G
Sbjct: 140 DRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVG 199
Query: 150 SALVNFYFKCRLFDDARKVFDEISDRDEVCYSALVVGLAQNAQSIDALSMFREMKASDVG 209
SAL++ Y + L DDA+ VFD + R++V ++AL+ G A+ + + AL +F+ M
Sbjct: 200 SALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFR 259
Query: 210 STLYSVSGALRATADLAALEQCRVLHAHAVVTGLDTDVIVQTALIDGYGKSGLIIDARQV 269
+ +S + A + LEQ + +HA+ + +G L+D Y KSG I DAR++
Sbjct: 260 PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKI 319
Query: 270 FDENLGCMNVVGWNAMLASYAQQGDKNSTLELFNSMEVFGMSPDEYSFLAILTSFCNSRL 329
FD L +VV WN++L +YAQ G + F M G+ P+E SFL++LT+ +S L
Sbjct: 320 FD-RLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 379
Query: 330 VSEIELWLRRMRVEYGVEPTLEHFTCLIDAMGRAGKLKEAERVAMTMPFVPDAAVWRALL 389
+ E + M+ + G+ P H+ ++D +GRAG L A R MP P AA+W+ALL
Sbjct: 380 LDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 439
Query: 390 SSSASHGAGDMAWTMAKRLLELDQHDDSAYVIVANALSATGRWEEVAVVRKLMKERQVKK 449
++ H ++ A+ + ELD D +VI+ N ++ GRW + A VRK MKE VKK
Sbjct: 440 NACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKK 499
Query: 450 KSGRSWIEVRGEVHVFLAGDRNHERIVEIYAKLKELIWEIEKLGYVPIWDEMLHEVGEKE 509
+ SW+E+ +H+F+A D H + EI K +E++ +I++LGYVP ++ V ++E
Sbjct: 500 EPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQE 559
Query: 510 KKEALWYHSEKLALAYGMLTGVAPPGKALRIVKNLKICRDCHQVFKYASRVLKREIIVRD 569
++ L YHSEK+ALA+ +L PPG + I KN+++C DCH K AS+V+ REIIVRD
Sbjct: 560 REVNLQYHSEKIALAFALLN--TPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRD 619
Query: 570 VNRYHRFSNGSCSCEDIW 584
NR+H F +G+CSC+D W
Sbjct: 620 TNRFHHFKDGNCSCKDYW 633
BLAST of HG10012837 vs. ExPASy Swiss-Prot
Match:
Q9SI53 (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1)
HSP 1 Score: 344.0 bits (881), Expect = 3.4e-93
Identity = 195/539 (36.18%), Postives = 313/539 (58.07%), Query Frame = 0
Query: 48 NNLITRYSKSNLLHYSVRLFDQIPFPNVVSWTAFISAHSNTFL---SLRHFVSMLRYPAF 107
N LI Y K NLL+ + +LFDQ+P NV+SWT ISA+S + +L V MLR
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 108 PNQRTLASLFKTCASLPSISFGLALHSLAHKLSLCYEPYSGSALVNFYFKCRLFDDARKV 167
PN T +S+ ++C + + LH K L + + SAL++ + K +DA V
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 219
Query: 168 FDEISDRDEVCYSALVVGLAQNAQSIDALSMFREMKASDVGSTLYSVSGALRATADLAAL 227
FDE+ D + +++++ G AQN++S AL +F+ MK + + +++ LRA LA L
Sbjct: 220 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 279
Query: 228 EQCRVLHAHAVVTGLDTDVIVQTALIDGYGKSGLIIDARQVFDENLGCMNVVGWNAMLAS 287
E H H + D D+I+ AL+D Y K G + DA +VF++ + +V+ W+ M++
Sbjct: 280 ELGMQAHVH--IVKYDQDLILNNALVDMYCKCGSLEDALRVFNQ-MKERDVITWSTMISG 339
Query: 288 YAQQGDKNSTLELFNSMEVFGMSPDEYSFLAILTSFCNSRLVSEIELWLRRMRVEYGVEP 347
AQ G L+LF M+ G P+ + + +L + ++ L+ + + R M+ YG++P
Sbjct: 340 LAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDP 399
Query: 348 TLEHFTCLIDAMGRAGKLKEAERVAMTMPFVPDAAVWRALLSSSASHGAGDMAWTMAKRL 407
EH+ C+ID +G+AGKL +A ++ M PDA WR LL + +A AK++
Sbjct: 400 VREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKV 459
Query: 408 LELDQHDDSAYVIVANALSATGRWEEVAVVRKLMKERQVKKKSGRSWIEVRGEVHVFLAG 467
+ LD D Y +++N + + +W+ V +R M++R +KK+ G SWIEV ++H F+ G
Sbjct: 460 IALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIG 519
Query: 468 DRNHERIVEIYAKLKELIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYGML 527
D +H +IVE+ KL +LI + +GYVP + +L ++ ++ +++L +HSEKLALA+G++
Sbjct: 520 DNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLM 579
Query: 528 TGVAPPGKALRIVKNLKICRDCHQVFKYASRVLKREIIVRDVNRYHRFSNGSCSCEDIW 584
T P K +RI KNL+IC DCH K AS++ R I++RD RYH F +G CSC D W
Sbjct: 580 T--LPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
BLAST of HG10012837 vs. ExPASy Swiss-Prot
Match:
Q9FHF9 (Pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H49 PE=2 SV=1)
HSP 1 Score: 340.9 bits (873), Expect = 2.9e-92
Identity = 187/548 (34.12%), Postives = 302/548 (55.11%), Query Frame = 0
Query: 40 PATDCSVYNNLITRYSKSNLLHYSVRLFDQIPFPNVVSWTAFI---SAHSNTFLSLRHFV 99
P D + +N+++ Y + + +++LF Q+P NV+SWT I + + +L F
Sbjct: 155 PVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFK 214
Query: 100 SMLRYPAFPNQRTLASLFKTCASLPSISFGLALHSLAHKLSLCYEPYSGSALVNFYFKCR 159
+MLR R + CA+ P+ G+ +H L KL YE Y ++L+ FY C+
Sbjct: 215 NMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCK 274
Query: 160 LFDDARKVFDEISDRDEVCYSALVVGLAQNAQSIDALSMFREMKASDVGSTLYSVSGALR 219
D+RKVFDE ++AL+ G + N + DALS+F M + + + + L
Sbjct: 275 RIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLN 334
Query: 220 ATADLAALEQCRVLHAHAVVTGLDTDVIVQTALIDGYGKSGLIIDARQVFDENLGCMNVV 279
+ + L L+ + +H AV GL+TD V +L+ Y SG + DA VF + + ++V
Sbjct: 335 SCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIK-IFKKSIV 394
Query: 280 GWNAMLASYAQQGDKNSTLELFNSMEVFGMSPDEYSFLAILTSFCNSRLVSE-IELWLRR 339
WN+++ AQ G +F M PDE +F +L++ + + + +L+
Sbjct: 395 SWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYM 454
Query: 340 MRVEYGVEPTLEHFTCLIDAMGRAGKLKEAERVAMTMPFVPDAAVWRALLSSSASHGAGD 399
++ ++H+TC++D +GR GKLKEAE + M P+ VW ALLS+ H D
Sbjct: 455 SSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVD 514
Query: 400 MAWTMAKRLLELDQHDDSAYVIVANALSATGRWEEVAVVRKLMKERQVKKKSGRSWIEVR 459
A + LD +AYV+++N ++ GRW V+ +R MK+ + KK G SW+ +R
Sbjct: 515 RGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIR 574
Query: 460 GEVHVFLAGDRNHERIVEIYAKLKELIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSE 519
G+ H F +GD+ H IY KL+ L ++++LGY P + LH+V +++K+E LWYHSE
Sbjct: 575 GKKHEFFSGDQPH--CSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSE 634
Query: 520 KLALAYGMLTGVAPPGKALRIVKNLKICRDCHQVFKYASRVLKREIIVRDVNRYHRFSNG 579
+LA+A+G++ V G A+ ++KNL++C DCH V K S V+ REI++RD R+H F NG
Sbjct: 635 RLAIAFGLINTV--EGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNG 694
Query: 580 SCSCEDIW 584
+CSC D W
Sbjct: 695 TCSCGDYW 697
BLAST of HG10012837 vs. ExPASy TrEMBL
Match:
A0A6J1IHT2 (pentatricopeptide repeat-containing protein At4g33170-like OS=Cucurbita maxima OX=3661 GN=LOC111473187 PE=3 SV=1)
HSP 1 Score: 1038.1 bits (2683), Expect = 1.4e-299
Identity = 514/583 (88.16%), Postives = 542/583 (92.97%), Query Frame = 0
Query: 1 MNDFFDSDPTPPPAPPMATVTTAASKLDPRIVHAQAIKSPATDCSVYNNLITRYSKSNLL 60
MND FD DP PP APP+A T AA K DPRI+HAQAIKSPATD SVYNNLIT Y K+NLL
Sbjct: 1 MNDLFDPDPIPPRAPPLAAATAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANLL 60
Query: 61 HYSVRLFDQIPFPNVVSWTAFISAHSNTFLSLRHFVSMLRYPAFPNQRTLASLFKTCASL 120
HYSVRLFDQIP PNVVSWTA ISAHSNTFL+LRHFVSMLRYP+FPNQRTLASLFKTCASL
Sbjct: 61 HYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLFKTCASL 120
Query: 121 PSISFGLALHSLAHKLSLCYEPYSGSALVNFYFKCRLFDDARKVFDEISDRDEVCYSALV 180
P +SFGL+LHSLAHKLSLC EP+ GSALVNFY K LFDDARKVFDEISD DEVCYSALV
Sbjct: 121 PCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSALV 180
Query: 181 VGLAQNAQSIDALSMFREMKASDVGSTLYSVSGALRATADLAALEQCRVLHAHAVVTGLD 240
VGLAQNAQSIDALSMFREMKAS+V ST+YSVSGALRA ADLAALEQCRVLH HAV TGLD
Sbjct: 181 VGLAQNAQSIDALSMFREMKASEVASTMYSVSGALRAAADLAALEQCRVLHGHAVSTGLD 240
Query: 241 TDVIVQTALIDGYGKSGLIIDARQVFDENLGCMNVVGWNAMLASYAQQGDKNSTLELFNS 300
TDVIVQTALIDGYGKSGLIIDARQVF+E+LGCMNVVGWNAMLASYAQQGDKNSTLELFNS
Sbjct: 241 TDVIVQTALIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFNS 300
Query: 301 MEVFGMSPDEYSFLAILTSFCNSRLVSEIELWLRRMRVEYGVEPTLEHFTCLIDAMGRAG 360
M FG+ PDEY+FLAILTS+CNSRLV EIELWLRRMRVEYGV+PTLEHFTCLIDAMGR G
Sbjct: 301 MGSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMRVEYGVQPTLEHFTCLIDAMGRDG 360
Query: 361 KLKEAERVAMTMPFVPDAAVWRALLSSSASHGAGDMAWTMAKRLLELDQHDDSAYVIVAN 420
KL+EAER+AMTMPFVPDAAVWRALLSSSASHGAGDMAW MAKRLLEL+ HDDSAYVIVAN
Sbjct: 361 KLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVAN 420
Query: 421 ALSATGRWEEVAVVRKLMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERIVEIYAKLKE 480
ALS+T RWEEVA+VRK+MKERQVKKKSGRSWIEVRGEVHVFLAGDRNHER EIYAKL+
Sbjct: 421 ALSSTARWEEVAIVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLRN 480
Query: 481 LIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYGMLTGVAPPGKALRIVKNL 540
LIWEIEKLGYVPIW EMLHEVGEKEKKEALWYHSEKLALAYG+L G APPGKALRIVKNL
Sbjct: 481 LIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKNL 540
Query: 541 KICRDCHQVFKYASRVLKREIIVRDVNRYHRFSNGSCSCEDIW 584
+ICRDCHQVFKYASRVL+REI+VRDVNRYHRF NGSC+C DIW
Sbjct: 541 RICRDCHQVFKYASRVLRREIVVRDVNRYHRFLNGSCTCGDIW 583
BLAST of HG10012837 vs. ExPASy TrEMBL
Match:
A0A6J1G6S2 (pentatricopeptide repeat-containing protein At4g33170-like OS=Cucurbita moschata OX=3662 GN=LOC111451382 PE=3 SV=1)
HSP 1 Score: 1034.2 bits (2673), Expect = 2.0e-298
Identity = 513/583 (87.99%), Postives = 541/583 (92.80%), Query Frame = 0
Query: 1 MNDFFDSDPTPPPAPPMATVTTAASKLDPRIVHAQAIKSPATDCSVYNNLITRYSKSNLL 60
MND FDSDP PP APP+A T AA K DPRI+HAQAIKSPATD SVYNNLIT Y K+NLL
Sbjct: 1 MNDLFDSDPIPPRAPPLAAATAAAGKSDPRIIHAQAIKSPATDRSVYNNLITLYGKANLL 60
Query: 61 HYSVRLFDQIPFPNVVSWTAFISAHSNTFLSLRHFVSMLRYPAFPNQRTLASLFKTCASL 120
HYSVRLFDQIP PNVVSWTA ISAHSNTFL+LRHFVSMLRYP+FPNQRTLASL KTCASL
Sbjct: 61 HYSVRLFDQIPLPNVVSWTALISAHSNTFLALRHFVSMLRYPSFPNQRTLASLLKTCASL 120
Query: 121 PSISFGLALHSLAHKLSLCYEPYSGSALVNFYFKCRLFDDARKVFDEISDRDEVCYSALV 180
P +SFGL+LHSLAHKLSLC EP+ GSALVNFY K LFDDARKVFDEISD DEVCYSALV
Sbjct: 121 PCVSFGLSLHSLAHKLSLCSEPFCGSALVNFYSKSHLFDDARKVFDEISDTDEVCYSALV 180
Query: 181 VGLAQNAQSIDALSMFREMKASDVGSTLYSVSGALRATADLAALEQCRVLHAHAVVTGLD 240
VGLAQNAQSIDALS+FREMKASDV ST+YSVSGALRA ADLAALEQCRVLH HAVV GLD
Sbjct: 181 VGLAQNAQSIDALSVFREMKASDVASTMYSVSGALRAAADLAALEQCRVLHGHAVVVGLD 240
Query: 241 TDVIVQTALIDGYGKSGLIIDARQVFDENLGCMNVVGWNAMLASYAQQGDKNSTLELFNS 300
TDVIVQT+LIDGYGKSGLIIDARQVF+E+LGCMNVVGWNAMLASYAQQGDKNSTLELFNS
Sbjct: 241 TDVIVQTSLIDGYGKSGLIIDARQVFEESLGCMNVVGWNAMLASYAQQGDKNSTLELFNS 300
Query: 301 MEVFGMSPDEYSFLAILTSFCNSRLVSEIELWLRRMRVEYGVEPTLEHFTCLIDAMGRAG 360
M FG+ PDEY+FLAILTS+CNSRLV EIELWLRRM VEYGV+PTLEH+TCLIDAMGRAG
Sbjct: 301 MVSFGLCPDEYTFLAILTSYCNSRLVGEIELWLRRMGVEYGVQPTLEHYTCLIDAMGRAG 360
Query: 361 KLKEAERVAMTMPFVPDAAVWRALLSSSASHGAGDMAWTMAKRLLELDQHDDSAYVIVAN 420
KL+EAER+AMTMPFVPDAAVWRALLSSSASHGAGDMAW MAKRLLEL+ HDDSAYVIVAN
Sbjct: 361 KLEEAERIAMTMPFVPDAAVWRALLSSSASHGAGDMAWAMAKRLLELNPHDDSAYVIVAN 420
Query: 421 ALSATGRWEEVAVVRKLMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERIVEIYAKLKE 480
ALS+T RWEEVAVVRK+MKERQVKKKSGRSWIEVRGEVHVFLAGDRNHER EIYAKL+
Sbjct: 421 ALSSTARWEEVAVVRKMMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERTEEIYAKLRN 480
Query: 481 LIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYGMLTGVAPPGKALRIVKNL 540
LIWEIEKLGYVPIW EMLHEVGEKEKKEALWYHSEKLALAYG+L G APPGKALRIVKNL
Sbjct: 481 LIWEIEKLGYVPIWAEMLHEVGEKEKKEALWYHSEKLALAYGVLVGAAPPGKALRIVKNL 540
Query: 541 KICRDCHQVFKYASRVLKREIIVRDVNRYHRFSNGSCSCEDIW 584
+ICRDCHQVFKYASRVL REI+VRDVNRYHRF NGSC+C DIW
Sbjct: 541 RICRDCHQVFKYASRVLGREIVVRDVNRYHRFLNGSCTCGDIW 583
BLAST of HG10012837 vs. ExPASy TrEMBL
Match:
A0A6J1DUT1 (pentatricopeptide repeat-containing protein At4g33170-like OS=Momordica charantia OX=3673 GN=LOC111024565 PE=3 SV=1)
HSP 1 Score: 1014.6 bits (2622), Expect = 1.6e-292
Identity = 511/585 (87.35%), Postives = 540/585 (92.31%), Query Frame = 0
Query: 1 MNDFFDSDPT--PPPAPPMATVTTAASKLDPRIVHAQAIKSPATDCSVYNNLITRYSKSN 60
MNDFFD DPT PPPAPP+A AA K DPRIVHAQAIKSPAT SVYNNLIT YSKS+
Sbjct: 1 MNDFFDPDPTPAPPPAPPLA----AAGKSDPRIVHAQAIKSPATHRSVYNNLITLYSKSS 60
Query: 61 LLHYSVRLFDQIPFPNVVSWTAFISAHSNTFLSLRHFVSMLRYPAFPNQRTLASLFKTCA 120
LHYSVRLF QIPFPNVVSWTA ISAHSNT LSLRHF+ MLRYPAFPNQRTLASLFKTCA
Sbjct: 61 FLHYSVRLFHQIPFPNVVSWTALISAHSNTSLSLRHFIYMLRYPAFPNQRTLASLFKTCA 120
Query: 121 SLPSISFGLALHSLAHKLSLCYEPYSGSALVNFYFKCRLFDDARKVFDEISDRDEVCYSA 180
SLPS+ FG ALHSLA+KLSLC EP+SGSALVNFY KC+LF DARKVFDEISDRDEVCYSA
Sbjct: 121 SLPSVPFGFALHSLAYKLSLCSEPFSGSALVNFYSKCQLFGDARKVFDEISDRDEVCYSA 180
Query: 181 LVVGLAQNAQSIDALSMFREMKASDVGSTLYSVSGALRATADLAALEQCRVLHAHAVVTG 240
LVVGLAQNAQSIDALSMFREMK DV ST+YSVSGALRA ADLAALEQCRVLH HAVVTG
Sbjct: 181 LVVGLAQNAQSIDALSMFREMKVCDVASTMYSVSGALRAAADLAALEQCRVLHGHAVVTG 240
Query: 241 LDTDVIVQTALIDGYGKSGLIIDARQVFDENLGCMNVVGWNAMLASYAQQGDKNSTLELF 300
LDTDVIVQTALIDGYGKSGLI+DAR+VFDE+L MNVVGWNAMLASYAQQGDKNS LELF
Sbjct: 241 LDTDVIVQTALIDGYGKSGLILDAREVFDESLASMNVVGWNAMLASYAQQGDKNSALELF 300
Query: 301 NSMEVFGMSPDEYSFLAILTSFCNSRLVSEIELWLRRMRVEYGVEPTLEHFTCLIDAMGR 360
NSM G+SPDEYSFLAILTS+CNSR V +I+LWLRRMRV YGVEPTLEHFTCLIDAMGR
Sbjct: 301 NSMAARGLSPDEYSFLAILTSYCNSRSVGDIQLWLRRMRVGYGVEPTLEHFTCLIDAMGR 360
Query: 361 AGKLKEAERVAMTMPFVPDAAVWRALLSSSASHGAGDMAWTMAKRLLELDQHDDSAYVIV 420
GKLKEAERVAMTMPF+PDAAVWRALLSSSASHGAG+MAW MAKRLLEL+ HDDSAYVIV
Sbjct: 361 VGKLKEAERVAMTMPFMPDAAVWRALLSSSASHGAGNMAWAMAKRLLELNPHDDSAYVIV 420
Query: 421 ANALSATGRWEEVAVVRKLMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERIVEIYAKL 480
ANALSAT RWEEVAVVRKLMKERQVKKKSGRSWIEVRG+VHVFLAGDRNHER E+YAKL
Sbjct: 421 ANALSATARWEEVAVVRKLMKERQVKKKSGRSWIEVRGKVHVFLAGDRNHERAEEVYAKL 480
Query: 481 KELIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYGMLTGVAPPGKALRIVK 540
+ELI EIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALA+G++ GVAPPGKALRIVK
Sbjct: 481 RELIREIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAFGVVAGVAPPGKALRIVK 540
Query: 541 NLKICRDCHQVFKYASRVLKREIIVRDVNRYHRFSNGSCSCEDIW 584
NL+IC+DCHQVFKYASRVL+REIIVRDVNRYHRF +GSC+CEDIW
Sbjct: 541 NLRICKDCHQVFKYASRVLEREIIVRDVNRYHRFLHGSCTCEDIW 581
BLAST of HG10012837 vs. ExPASy TrEMBL
Match:
A0A0A0L4A2 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G134640 PE=3 SV=1)
HSP 1 Score: 983.4 bits (2541), Expect = 4.1e-283
Identity = 489/583 (83.88%), Postives = 533/583 (91.42%), Query Frame = 0
Query: 1 MNDFFDSDPTPPPAPPMATVTTAASKLDPRIVHAQAIKSPATDCSVYNNLITRYSKSNLL 60
MN FF SDPTP PAPP+A T +K DPRI HAQAIKSPAT+C VYNNLITRYSK+NLL
Sbjct: 1 MNAFFPSDPTPLPAPPLAAATKVVAKSDPRIDHAQAIKSPATECVVYNNLITRYSKANLL 60
Query: 61 HYSVRLFDQIPFPNVVSWTAFISAHSNTFLSLRHFVSMLRYPAFPNQRTLASLFKTCASL 120
HYS RLF+QIPFP++VSWTA ISAHS+TFLSLRHFVSMLRYP FPN+RTLA LFKTCASL
Sbjct: 61 HYSARLFNQIPFPDIVSWTALISAHSSTFLSLRHFVSMLRYPTFPNERTLAPLFKTCASL 120
Query: 121 PSISFGLALHSLAHKLSLCYEPYSGSALVNFYFKCRLFDDARKVFDEISDRDEVCYSALV 180
P +SFG ALHSLA+KLSLC PYSGSALVNFY KCRLF+DA KVFDEIS RDE CYSALV
Sbjct: 121 PCVSFGFALHSLAYKLSLCNGPYSGSALVNFYSKCRLFNDACKVFDEISYRDEFCYSALV 180
Query: 181 VGLAQNAQSIDALSMFREMKASDVGSTLYSVSGALRATADLAALEQCRVLHAHAVVTGLD 240
VGLAQNAQSI ALSMFR+MKAS+V ST+YSVSGALRA ADLAALE+CRV+H+HAVVTGLD
Sbjct: 181 VGLAQNAQSIRALSMFRQMKASEVASTIYSVSGALRAAADLAALERCRVIHSHAVVTGLD 240
Query: 241 TDVIVQTALIDGYGKSGLIIDARQVFDENLGCMNVVGWNAMLASYAQQGDKNSTLELFNS 300
T+VIVQTALIDGYGKSGLIIDARQVFDENLGCMN+VGWNAML+SYAQQGD+NSTLE+FNS
Sbjct: 241 TNVIVQTALIDGYGKSGLIIDARQVFDENLGCMNIVGWNAMLSSYAQQGDQNSTLEVFNS 300
Query: 301 MEVFGMSPDEYSFLAILTSFCNSRLVSEIELWLRRMRVEYGVEPTLEHFTCLIDAMGRAG 360
M+ FGMSPDEYSFLAIL+SFCNS LVSEI+ WLRRM VEYGV+PTLEHFTCLIDA+GR G
Sbjct: 301 MKPFGMSPDEYSFLAILSSFCNSGLVSEIKPWLRRMIVEYGVKPTLEHFTCLIDALGRTG 360
Query: 361 KLKEAERVAMTMPFVPDAAVWRALLSSSASHGAGDMAWTMAKRLLELDQHDDSAYVIVAN 420
KL+EAERVAMTMPFVPD AVWRALLSSSASHGAGDMAWTMAKRLLEL+QHDDSAYVIV+N
Sbjct: 361 KLEEAERVAMTMPFVPDEAVWRALLSSSASHGAGDMAWTMAKRLLELNQHDDSAYVIVSN 420
Query: 421 ALSATGRWEEVAVVRKLMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERIVEIYAKLKE 480
ALS RWEEVA+VRKLMKER VKK SG+SWIEVRGE HVFLAGDRNHER E+ AKLKE
Sbjct: 421 ALSVAARWEEVALVRKLMKERHVKKISGKSWIEVRGEAHVFLAGDRNHERAEEMNAKLKE 480
Query: 481 LIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYGMLTGVAPPGKALRIVKNL 540
L+ EIEKLGYVP+ E LH+VGEKE+KEAL YHSEKLALAYG+LTGVAPPGKALRI+KNL
Sbjct: 481 LVGEIEKLGYVPVCSETLHKVGEKERKEALLYHSEKLALAYGILTGVAPPGKALRIIKNL 540
Query: 541 KICRDCHQVFKYASRVLKREIIVRDVNRYHRFSNGSCSCEDIW 584
+ICRDCH FKYASRVLK+EIIVRD+NRYHRFS GSC+C DIW
Sbjct: 541 RICRDCHLFFKYASRVLKKEIIVRDINRYHRFSYGSCTCADIW 583
BLAST of HG10012837 vs. ExPASy TrEMBL
Match:
A0A5A7U1J3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002030 PE=3 SV=1)
HSP 1 Score: 978.4 bits (2528), Expect = 1.3e-281
Identity = 493/583 (84.56%), Postives = 532/583 (91.25%), Query Frame = 0
Query: 1 MNDFFDSDPTPPPAPPMATVTTAASKLDPRIVHAQAIKSPATDCSVYNNLITRYSKSNLL 60
MN FF SDPTPPP PP+A T +K DPRI HAQAIKSPATD +VYNNLITRYS++NLL
Sbjct: 1 MNAFFASDPTPPPEPPLAAATKVVAKSDPRIDHAQAIKSPATDRAVYNNLITRYSRTNLL 60
Query: 61 HYSVRLFDQIPFPNVVSWTAFISAHSNTFLSLRHFVSMLRYPAFPNQRTLASLFKTCASL 120
HYSVRLF QIPFP++VSWTAFISAHSNTFLSLRHFVSMLRYP FPN+RTLASLFKTCASL
Sbjct: 61 HYSVRLFYQIPFPDIVSWTAFISAHSNTFLSLRHFVSMLRYPTFPNERTLASLFKTCASL 120
Query: 121 PSISFGLALHSLAHKLSLCYEPYSGSALVNFYFKCRLFDDARKVFDEISDRDEVCYSALV 180
P +SFGLALHSLA+KLSLC + YSGSALVNFY KCRLF+ A KVFDEISDRDE CYSALV
Sbjct: 121 PCVSFGLALHSLAYKLSLCNDRYSGSALVNFYSKCRLFNHACKVFDEISDRDEFCYSALV 180
Query: 181 VGLAQNAQSIDALSMFREMKASDVGSTLYSVSGALRATADLAALEQCRVLHAHAVVTGLD 240
VGLAQNAQSI ALSMFR+MKAS+V ST+YSVSGAL A ADLAALE+CRVLH+HAVVTGLD
Sbjct: 181 VGLAQNAQSIPALSMFRQMKASEVASTIYSVSGALCAAADLAALERCRVLHSHAVVTGLD 240
Query: 241 TDVIVQTALIDGYGKSGLIIDARQVFDENLGCMNVVGWNAMLASYAQQGDKNSTLELFNS 300
T+VIVQTALID YGKSGLII+ARQVFDENLGCMN+VGWNA+L+SYAQQGD+NST ELFNS
Sbjct: 241 TNVIVQTALIDAYGKSGLIIEARQVFDENLGCMNIVGWNAILSSYAQQGDQNSTRELFNS 300
Query: 301 MEVFGMSPDEYSFLAILTSFCNSRLVSEIELWLRRMRVEYGVEPTLEHFTCLIDAMGRAG 360
M+ F MSPDEYSFLAIL+SFCN+ V EI+ WLRRM VEYGV+PTLEHFTCLIDA+GRAG
Sbjct: 301 MKAFRMSPDEYSFLAILSSFCNAGSVGEIKPWLRRMIVEYGVKPTLEHFTCLIDALGRAG 360
Query: 361 KLKEAERVAMTMPFVPDAAVWRALLSSSASHGAGDMAWTMAKRLLELDQHDDSAYVIVAN 420
KL+EAERVAMTMPFVPD AVWRALL+SSASHGAGDMAW MAKRLLEL+ HDDSAYVIVAN
Sbjct: 361 KLEEAERVAMTMPFVPDEAVWRALLTSSASHGAGDMAWKMAKRLLELNLHDDSAYVIVAN 420
Query: 421 ALSATGRWEEVAVVRKLMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERIVEIYAKLKE 480
ALSAT RWEEVAVVRKLMKER VKKKSGRSWIEVRGEVHVFLAGDRNHER E+ AKLKE
Sbjct: 421 ALSATARWEEVAVVRKLMKERDVKKKSGRSWIEVRGEVHVFLAGDRNHERAEELNAKLKE 480
Query: 481 LIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYGMLTGVAPPGKALRIVKNL 540
L+ EIEKLGYVPI E+L EVGEKEKKEAL YHSEKLALAYG+LTGVA PGKALRIVKNL
Sbjct: 481 LVGEIEKLGYVPICGEVLQEVGEKEKKEALLYHSEKLALAYGILTGVALPGKALRIVKNL 540
Query: 541 KICRDCHQVFKYASRVLKREIIVRDVNRYHRFSNGSCSCEDIW 584
+ICRDCHQ FKYASRVLK+EIIVRDVNRYHRFS G C+C DIW
Sbjct: 541 RICRDCHQFFKYASRVLKKEIIVRDVNRYHRFSYGGCTCADIW 583
BLAST of HG10012837 vs. TAIR 10
Match:
AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 386.7 bits (992), Expect = 3.2e-107
Identity = 214/581 (36.83%), Postives = 349/581 (60.07%), Query Frame = 0
Query: 12 PPAPPMATVTTAASKLDPRI-----VHAQAIK-SPATDCSVYNNLITRYSKSNLLHYSVR 71
P M +V AAS L + VH AIK + +D V LI YS++ + +
Sbjct: 414 PDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEI 473
Query: 72 LFDQIPFPNVVSWTAFISAHSNT---FLSLRHFVSMLRYPAFPNQRTLASLFKTCASLPS 131
LF++ F ++V+W A ++ ++ + +L+ F M + + TLA++FKTC L +
Sbjct: 474 LFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFA 533
Query: 132 ISFGLALHSLAHKLSLCYEPYSGSALVNFYFKCRLFDDARKVFDEISDRDEVCYSALVVG 191
I+ G +H+ A K + + S +++ Y KC A+ FD I D+V ++ ++ G
Sbjct: 534 INQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISG 593
Query: 192 LAQNAQSIDALSMFREMKASDVGSTLYSVSGALRATADLAALEQCRVLHAHAVVTGLDTD 251
+N + A +F +M+ V ++++ +A++ L ALEQ R +HA+A+ D
Sbjct: 594 CIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTND 653
Query: 252 VIVQTALIDGYGKSGLIIDARQVFDENLGCMNVVGWNAMLASYAQQGDKNSTLELFNSME 311
V T+L+D Y K G I DA +F + + MN+ WNAML AQ G+ TL+LF M+
Sbjct: 654 PFVGTSLVDMYAKCGSIDDAYCLF-KRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMK 713
Query: 312 VFGMSPDEYSFLAILTSFCNSRLVSEIELWLRRMRVEYGVEPTLEHFTCLIDAMGRAGKL 371
G+ PD+ +F+ +L++ +S LVSE +R M +YG++P +EH++CL DA+GRAG +
Sbjct: 714 SLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLV 773
Query: 372 KEAERVAMTMPFVPDAAVWRALLSSSASHGAGDMAWTMAKRLLELDQHDDSAYVIVANAL 431
K+AE + +M A+++R LL++ G + +A +LLEL+ D SAYV+++N
Sbjct: 774 KQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMY 833
Query: 432 SATGRWEEVAVVRKLMKERQVKKKSGRSWIEVRGEVHVFLAGDRNHERIVEIYAKLKELI 491
+A +W+E+ + R +MK +VKK G SWIEV+ ++H+F+ DR++ + IY K+K++I
Sbjct: 834 AAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMI 893
Query: 492 WEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYGMLTGVAPPGKALRIVKNLKI 551
+I++ GYVP D L +V E+EK+ AL+YHSEKLA+A+G+L+ PP +R++KNL++
Sbjct: 894 RDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLS--TPPSTPIRVIKNLRV 953
Query: 552 CRDCHQVFKYASRVLKREIIVRDVNRYHRFSNGSCSCEDIW 584
C DCH KY ++V REI++RD NR+HRF +G CSC D W
Sbjct: 954 CGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
BLAST of HG10012837 vs. TAIR 10
Match:
AT5G52630.1 (mitochondrial RNAediting factor 1 )
HSP 1 Score: 362.5 bits (929), Expect = 6.5e-100
Identity = 205/541 (37.89%), Postives = 312/541 (57.67%), Query Frame = 0
Query: 46 VYNNLITRYSKSNLLHYSVRLFDQIPFPNVVSWTAFISAHSNT---FLSLRHFVSMLRYP 105
V NNLI YSKS L S R F+ P + +W++ IS + ++SL M+
Sbjct: 52 VANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGN 111
Query: 106 AFPNQRTLASLFKTCASLPSISFGLALHSLAHKLSLCYEPYSGSALVNFYFKCRLFDDAR 165
P+ L S K+CA L G ++H L+ K + + GS+LV+ Y KC AR
Sbjct: 112 LRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYAR 171
Query: 166 KVFDEISDRDEVCYSALVVGLAQNAQSIDALSMFREMKASDVGSTLYSVSGALRATADLA 225
K+FDE+ R+ V +S ++ G AQ ++ +AL +F+E ++ YS S + A+
Sbjct: 172 KMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANST 231
Query: 226 ALEQCRVLHAHAVVTGLDTDVIVQTALIDGYGKSGLIIDARQVFDENLGCMNVVGWNAML 285
LE R +H ++ + D+ V ++L+ Y K G+ A QVF+E + N+ WNAML
Sbjct: 232 LLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNE-VPVKNLGIWNAML 291
Query: 286 ASYAQQGDKNSTLELFNSMEVFGMSPDEYSFLAILTSFCNSRLVSEIELWLRRMRVEYGV 345
+YAQ +ELF M++ GM P+ +FL +L + ++ LV E + +M+ E +
Sbjct: 292 KAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMK-ESRI 351
Query: 346 EPTLEHFTCLIDAMGRAGKLKEAERVAMTMPFVPDAAVWRALLSSSASHGAGDMAWTMAK 405
EPT +H+ L+D +GRAG+L+EA V MP P +VW ALL+S H ++A A
Sbjct: 352 EPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAAD 411
Query: 406 RLLELDQHDDSAYVIVANALSATGRWEEVAVVRKLMKERQVKKKSGRSWIEVRGEVHVFL 465
++ EL ++ ++NA +A GR+E+ A RKL+++R KK++G SW+E R +VH F
Sbjct: 412 KVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFA 471
Query: 466 AGDRNHERIVEIYAKLKELIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYG 525
AG+R HE+ EIY KL EL E+EK GY+ +L EV EK + + YHSE+LA+A+G
Sbjct: 472 AGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFG 531
Query: 526 MLTGVAPPGKALRIVKNLKICRDCHQVFKYASRVLKREIIVRDVNRYHRFSNGSCSCEDI 584
++T P + +R++KNL++C DCH K+ S +R IIVRD NR+HRF +G CSC D
Sbjct: 532 LIT--FPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDY 588
BLAST of HG10012837 vs. TAIR 10
Match:
AT2G03880.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 344.0 bits (881), Expect = 2.4e-94
Identity = 195/539 (36.18%), Postives = 313/539 (58.07%), Query Frame = 0
Query: 48 NNLITRYSKSNLLHYSVRLFDQIPFPNVVSWTAFISAHSNTFL---SLRHFVSMLRYPAF 107
N LI Y K NLL+ + +LFDQ+P NV+SWT ISA+S + +L V MLR
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 108 PNQRTLASLFKTCASLPSISFGLALHSLAHKLSLCYEPYSGSALVNFYFKCRLFDDARKV 167
PN T +S+ ++C + + LH K L + + SAL++ + K +DA V
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 219
Query: 168 FDEISDRDEVCYSALVVGLAQNAQSIDALSMFREMKASDVGSTLYSVSGALRATADLAAL 227
FDE+ D + +++++ G AQN++S AL +F+ MK + + +++ LRA LA L
Sbjct: 220 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 279
Query: 228 EQCRVLHAHAVVTGLDTDVIVQTALIDGYGKSGLIIDARQVFDENLGCMNVVGWNAMLAS 287
E H H + D D+I+ AL+D Y K G + DA +VF++ + +V+ W+ M++
Sbjct: 280 ELGMQAHVH--IVKYDQDLILNNALVDMYCKCGSLEDALRVFNQ-MKERDVITWSTMISG 339
Query: 288 YAQQGDKNSTLELFNSMEVFGMSPDEYSFLAILTSFCNSRLVSEIELWLRRMRVEYGVEP 347
AQ G L+LF M+ G P+ + + +L + ++ L+ + + R M+ YG++P
Sbjct: 340 LAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDP 399
Query: 348 TLEHFTCLIDAMGRAGKLKEAERVAMTMPFVPDAAVWRALLSSSASHGAGDMAWTMAKRL 407
EH+ C+ID +G+AGKL +A ++ M PDA WR LL + +A AK++
Sbjct: 400 VREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKV 459
Query: 408 LELDQHDDSAYVIVANALSATGRWEEVAVVRKLMKERQVKKKSGRSWIEVRGEVHVFLAG 467
+ LD D Y +++N + + +W+ V +R M++R +KK+ G SWIEV ++H F+ G
Sbjct: 460 IALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIG 519
Query: 468 DRNHERIVEIYAKLKELIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSEKLALAYGML 527
D +H +IVE+ KL +LI + +GYVP + +L ++ ++ +++L +HSEKLALA+G++
Sbjct: 520 DNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLM 579
Query: 528 TGVAPPGKALRIVKNLKICRDCHQVFKYASRVLKREIIVRDVNRYHRFSNGSCSCEDIW 584
T P K +RI KNL+IC DCH K AS++ R I++RD RYH F +G CSC D W
Sbjct: 580 T--LPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
BLAST of HG10012837 vs. TAIR 10
Match:
AT3G24000.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 343.6 bits (880), Expect = 3.1e-94
Identity = 200/551 (36.30%), Postives = 310/551 (56.26%), Query Frame = 0
Query: 30 RIVHAQAIKSP-ATDCSVYNNLITRYSKSNLLHYSVRLFDQIPFPNVVSWTAFISA---H 89
RIVHA ++S D + N L+ Y+K L + ++F+++P + V+WT IS H
Sbjct: 80 RIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQH 139
Query: 90 SNTFLSLRHFVSMLRYPAFPNQRTLASLFKTCASLPSISFGLALHSLAHKLSLCYEPYSG 149
+L F MLR+ PN+ TL+S+ K A+ G LH K + G
Sbjct: 140 DRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVG 199
Query: 150 SALVNFYFKCRLFDDARKVFDEISDRDEVCYSALVVGLAQNAQSIDALSMFREMKASDVG 209
SAL++ Y + L DDA+ VFD + R++V ++AL+ G A+ + + AL +F+ M
Sbjct: 200 SALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFR 259
Query: 210 STLYSVSGALRATADLAALEQCRVLHAHAVVTGLDTDVIVQTALIDGYGKSGLIIDARQV 269
+ +S + A + LEQ + +HA+ + +G L+D Y KSG I DAR++
Sbjct: 260 PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKI 319
Query: 270 FDENLGCMNVVGWNAMLASYAQQGDKNSTLELFNSMEVFGMSPDEYSFLAILTSFCNSRL 329
FD L +VV WN++L +YAQ G + F M G+ P+E SFL++LT+ +S L
Sbjct: 320 FD-RLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 379
Query: 330 VSEIELWLRRMRVEYGVEPTLEHFTCLIDAMGRAGKLKEAERVAMTMPFVPDAAVWRALL 389
+ E + M+ + G+ P H+ ++D +GRAG L A R MP P AA+W+ALL
Sbjct: 380 LDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 439
Query: 390 SSSASHGAGDMAWTMAKRLLELDQHDDSAYVIVANALSATGRWEEVAVVRKLMKERQVKK 449
++ H ++ A+ + ELD D +VI+ N ++ GRW + A VRK MKE VKK
Sbjct: 440 NACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKK 499
Query: 450 KSGRSWIEVRGEVHVFLAGDRNHERIVEIYAKLKELIWEIEKLGYVPIWDEMLHEVGEKE 509
+ SW+E+ +H+F+A D H + EI K +E++ +I++LGYVP ++ V ++E
Sbjct: 500 EPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQE 559
Query: 510 KKEALWYHSEKLALAYGMLTGVAPPGKALRIVKNLKICRDCHQVFKYASRVLKREIIVRD 569
++ L YHSEK+ALA+ +L PPG + I KN+++C DCH K AS+V+ REIIVRD
Sbjct: 560 REVNLQYHSEKIALAFALLN--TPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRD 619
Query: 570 VNRYHRFSNGS 577
NR+H F + S
Sbjct: 620 TNRFHHFKDAS 626
BLAST of HG10012837 vs. TAIR 10
Match:
AT5G46460.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 340.9 bits (873), Expect = 2.0e-93
Identity = 187/548 (34.12%), Postives = 302/548 (55.11%), Query Frame = 0
Query: 40 PATDCSVYNNLITRYSKSNLLHYSVRLFDQIPFPNVVSWTAFI---SAHSNTFLSLRHFV 99
P D + +N+++ Y + + +++LF Q+P NV+SWT I + + +L F
Sbjct: 155 PVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFK 214
Query: 100 SMLRYPAFPNQRTLASLFKTCASLPSISFGLALHSLAHKLSLCYEPYSGSALVNFYFKCR 159
+MLR R + CA+ P+ G+ +H L KL YE Y ++L+ FY C+
Sbjct: 215 NMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCK 274
Query: 160 LFDDARKVFDEISDRDEVCYSALVVGLAQNAQSIDALSMFREMKASDVGSTLYSVSGALR 219
D+RKVFDE ++AL+ G + N + DALS+F M + + + + L
Sbjct: 275 RIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLN 334
Query: 220 ATADLAALEQCRVLHAHAVVTGLDTDVIVQTALIDGYGKSGLIIDARQVFDENLGCMNVV 279
+ + L L+ + +H AV GL+TD V +L+ Y SG + DA VF + + ++V
Sbjct: 335 SCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIK-IFKKSIV 394
Query: 280 GWNAMLASYAQQGDKNSTLELFNSMEVFGMSPDEYSFLAILTSFCNSRLVSE-IELWLRR 339
WN+++ AQ G +F M PDE +F +L++ + + + +L+
Sbjct: 395 SWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYM 454
Query: 340 MRVEYGVEPTLEHFTCLIDAMGRAGKLKEAERVAMTMPFVPDAAVWRALLSSSASHGAGD 399
++ ++H+TC++D +GR GKLKEAE + M P+ VW ALLS+ H D
Sbjct: 455 SSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVD 514
Query: 400 MAWTMAKRLLELDQHDDSAYVIVANALSATGRWEEVAVVRKLMKERQVKKKSGRSWIEVR 459
A + LD +AYV+++N ++ GRW V+ +R MK+ + KK G SW+ +R
Sbjct: 515 RGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIR 574
Query: 460 GEVHVFLAGDRNHERIVEIYAKLKELIWEIEKLGYVPIWDEMLHEVGEKEKKEALWYHSE 519
G+ H F +GD+ H IY KL+ L ++++LGY P + LH+V +++K+E LWYHSE
Sbjct: 575 GKKHEFFSGDQPH--CSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSE 634
Query: 520 KLALAYGMLTGVAPPGKALRIVKNLKICRDCHQVFKYASRVLKREIIVRDVNRYHRFSNG 579
+LA+A+G++ V G A+ ++KNL++C DCH V K S V+ REI++RD R+H F NG
Sbjct: 635 RLAIAFGLINTV--EGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNG 694
Query: 580 SCSCEDIW 584
+CSC D W
Sbjct: 695 TCSCGDYW 697
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038880033.1 | 4.1e-306 | 91.25 | pentatricopeptide repeat-containing protein At4g33170-like [Benincasa hispida] | [more] |
XP_022974509.1 | 2.9e-299 | 88.16 | pentatricopeptide repeat-containing protein At4g33170-like [Cucurbita maxima] | [more] |
XP_022947552.1 | 4.1e-298 | 87.99 | pentatricopeptide repeat-containing protein At4g33170-like [Cucurbita moschata] | [more] |
KAG6597338.1 | 4.1e-298 | 88.18 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_023540846.1 | 4.6e-297 | 87.65 | pentatricopeptide repeat-containing protein At4g33170-like [Cucurbita pepo subsp... | [more] |
Match Name | E-value | Identity | Description | |
Q9SMZ2 | 4.6e-106 | 36.83 | Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX... | [more] |
Q9LTF4 | 9.2e-99 | 37.89 | Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis th... | [more] |
Q9LIQ7 | 4.6e-98 | 36.74 | Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop... | [more] |
Q9SI53 | 3.4e-93 | 36.18 | Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop... | [more] |
Q9FHF9 | 2.9e-92 | 34.12 | Pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1IHT2 | 1.4e-299 | 88.16 | pentatricopeptide repeat-containing protein At4g33170-like OS=Cucurbita maxima O... | [more] |
A0A6J1G6S2 | 2.0e-298 | 87.99 | pentatricopeptide repeat-containing protein At4g33170-like OS=Cucurbita moschata... | [more] |
A0A6J1DUT1 | 1.6e-292 | 87.35 | pentatricopeptide repeat-containing protein At4g33170-like OS=Momordica charanti... | [more] |
A0A0A0L4A2 | 4.1e-283 | 83.88 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G1346... | [more] |
A0A5A7U1J3 | 1.3e-281 | 84.56 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT4G33170.1 | 3.2e-107 | 36.83 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G52630.1 | 6.5e-100 | 37.89 | mitochondrial RNAediting factor 1 | [more] |
AT2G03880.1 | 2.4e-94 | 36.18 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G24000.1 | 3.1e-94 | 36.30 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G46460.1 | 2.0e-93 | 34.12 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |