HG10012553 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTGGTGCTGTGGGAACTCCATTAATGGTGGAAGCTCAGATCGGTAACCTTATCAGAATCGACGGAGCTGTTTTTTGCAGTGTCAATGGCAACGTTATCGCCAATGCCACTATCCCAACTCCTCCTTTCGCAAGTACTTTTTCGCTTTCTATATTTGAAAATATTTTTACAAAATGACAAATTAGAGTTGTTTTAAAGAAATTGGCAGCAGTAACCTAAAAAACTTTTCCTTTCACAAGTACCAACATTATTTTAGATAACTCGTTGAAATAATTTGTCTCAATCATTTCTAACTAAGATCCGCCACCCATATTCAAATAAAAATTTAACTCTTTTCCTTATACATCCAAACGAAAGATTTTTTTGGGTTTTCTGAGTAGAATTCTTGGCCCGAACAAAGATTGAAATTGTATATCTTTCGCAAATCTTACTTACTTTCCCAAAATTTGATCTTTTCCAACTCATACTGTGATCACCCCGAGATCCATTTAGAAAAATGGATTGGACAATTAGTAAATACATTTGAAAATTCAAATCAGTCTGAAAACAGAAACCAGGCATAAAATTTGTGATTTGGGAAAGATTTGAAAAGATTAGGTAAGATTTTATACAAAAGATTACATAAGATTTGAAAAAATTATCTACAATCTTGATGTTCAATTTTATTGATAGTTTGGTGTAAGATGAAAATAGTTAAATTTTTATTCGAATCTCGGTAATCGATCTCGATTGAGAAGAATCGAGAAAGACTATTTCAACAAATTCTCTAAAATTGTACTAGTTATAAAAGATGAAAATATTTAAGGGTTGTTTCTGAGAATTTCTCTTGTTTTTGTTACAGTATTTTTTGTGTGAAGATTTACTTTTGCTCAGATTTTAAGTTACTAGATTTAAAAATTATAGATGGTGGAACATGGACAAATAATAGTTTAACAATAAAAATTTAAAATTGTTATGAAATGGACAAATAAAGAAAACGAAAAAGTATAAACAGTAAAGATCGACATATTCACTAACCGTGTATTAACTTCGTCCACGGGCAGAAGAGAGAAATTAGTTTATTATTAGAGATAAATATCATATAATACAGATCGCATATGCGTCAATAGGGTTAAAAGAATTATATATAGCACAACTCTTTAAACCCTAGGGCCAAATTAACTTATAACGCATATACAATTTAGGTTTCAATAATGTTGCCCCACCAGTGCGCTTCACCTCTAGACATGGTCATTTAGAACACCATATAATTAATATATTTAAGGCATTCCAACAAAAATAATTATATTGATAGATTGTGTTTGAAGAATATATATTCCGTGAAAAAGTTTTGAGATTAAAATATGAATTTTGAACTTTTTCCTCATGACTTTTACACAGATGCAACAGTACAGTTGGAGTGTGGAAACGGTAACATTGTGTCAACTACAACAACGAACAATATGGGAATGTTTACCATGTTGTTGAATCCTATGCAGACCCCTCTCTCTCTTCTCATGAACAGTTGCGACGTCGCAGTTAGAACGCCATTGTCCAACTGTAATAACATGGTGTCGTCGTCTCTTCCTGGAACTCTAACATCGAGCTTGGGTCCCCTCGGAAATACAATACAGGACGGCGTTAACATCACCAATGTCGGCCCCACCGGATTCCAGTTCCGACCGTACTTTTCTTAA ATGGTTGGTGCTGTGGGAACTCCATTAATGGTGGAAGCTCAGATCGGTAACCTTATCAGAATCGACGGAGCTGTTTTTTGCAGTGTCAATGGCAACGTTATCGCCAATGCCACTATCCCAACTCCTCCTTTCGCAAATGCAACAGTACAGTTGGAGTGTGGAAACGGTAACATTGTGTCAACTACAACAACGAACAATATGGGAATGTTTACCATGTTGTTGAATCCTATGCAGACCCCTCTCTCTCTTCTCATGAACAGTTGCGACGTCGCAGTTAGAACGCCATTGTCCAACTGTAATAACATGGTGTCGTCGTCTCTTCCTGGAACTCTAACATCGAGCTTGGGTCCCCTCGGAAATACAATACAGGACGGCGTTAACATCACCAATGTCGGCCCCACCGGATTCCAGTTCCGACCGTACTTTTCTTAA ATGGTTGGTGCTGTGGGAACTCCATTAATGGTGGAAGCTCAGATCGGTAACCTTATCAGAATCGACGGAGCTGTTTTTTGCAGTGTCAATGGCAACGTTATCGCCAATGCCACTATCCCAACTCCTCCTTTCGCAAATGCAACAGTACAGTTGGAGTGTGGAAACGGTAACATTGTGTCAACTACAACAACGAACAATATGGGAATGTTTACCATGTTGTTGAATCCTATGCAGACCCCTCTCTCTCTTCTCATGAACAGTTGCGACGTCGCAGTTAGAACGCCATTGTCCAACTGTAATAACATGGTGTCGTCGTCTCTTCCTGGAACTCTAACATCGAGCTTGGGTCCCCTCGGAAATACAATACAGGACGGCGTTAACATCACCAATGTCGGCCCCACCGGATTCCAGTTCCGACCGTACTTTTCTTAA MVGAVGTPLMVEAQIGNLIRIDGAVFCSVNGNVIANATIPTPPFANATVQLECGNGNIVSTTTTNNMGMFTMLLNPMQTPLSLLMNSCDVAVRTPLSNCNNMVSSSLPGTLTSSLGPLGNTIQDGVNITNVGPTGFQFRPYFS Homology
BLAST of HG10012553 vs. NCBI nr
Match: XP_038903470.1 (phylloplanin-like [Benincasa hispida]) HSP 1 Score: 152.1 bits (383), Expect = 3.5e-33 Identity = 85/146 (58.22%), Postives = 105/146 (71.92%), Query Frame = 0
BLAST of HG10012553 vs. NCBI nr
Match: XP_023522114.1 (phylloplanin-like [Cucurbita pepo subsp. pepo] >XP_023540360.1 phylloplanin-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 134.0 bits (336), Expect = 1.0e-27 Identity = 78/147 (53.06%), Postives = 100/147 (68.03%), Query Frame = 0
BLAST of HG10012553 vs. NCBI nr
Match: XP_022137816.1 (phylloplanin-like [Momordica charantia]) HSP 1 Score: 133.3 bits (334), Expect = 1.7e-27 Identity = 75/143 (52.45%), Postives = 101/143 (70.63%), Query Frame = 0
BLAST of HG10012553 vs. NCBI nr
Match: XP_022937971.1 (phylloplanin-like [Cucurbita moschata]) HSP 1 Score: 132.9 bits (333), Expect = 2.2e-27 Identity = 77/147 (52.38%), Postives = 100/147 (68.03%), Query Frame = 0
BLAST of HG10012553 vs. NCBI nr
Match: KAG6597529.1 (hypothetical protein SDJN03_10709, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028986.1 hypothetical protein SDJN02_10169 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 131.7 bits (330), Expect = 4.9e-27 Identity = 77/147 (52.38%), Postives = 100/147 (68.03%), Query Frame = 0
BLAST of HG10012553 vs. ExPASy Swiss-Prot
Match: Q56S59 (Phylloplanin OS=Nicotiana tabacum OX=4097 PE=1 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 9.4e-13 Identity = 53/140 (37.86%), Postives = 73/140 (52.14%), Query Frame = 0
BLAST of HG10012553 vs. ExPASy TrEMBL
Match: A0A6J1C7T1 (phylloplanin-like OS=Momordica charantia OX=3673 GN=LOC111009161 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 8.2e-28 Identity = 75/143 (52.45%), Postives = 101/143 (70.63%), Query Frame = 0
BLAST of HG10012553 vs. ExPASy TrEMBL
Match: A0A6J1FBV3 (phylloplanin-like OS=Cucurbita moschata OX=3662 GN=LOC111444198 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 1.1e-27 Identity = 77/147 (52.38%), Postives = 100/147 (68.03%), Query Frame = 0
BLAST of HG10012553 vs. ExPASy TrEMBL
Match: A0A5D3CZ16 (Phylloplanin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001120 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 2.0e-26 Identity = 75/147 (51.02%), Postives = 97/147 (65.99%), Query Frame = 0
BLAST of HG10012553 vs. ExPASy TrEMBL
Match: A0A6J1IE70 (phylloplanin-like OS=Cucurbita maxima OX=3661 GN=LOC111472350 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 2.0e-26 Identity = 77/147 (52.38%), Postives = 97/147 (65.99%), Query Frame = 0
BLAST of HG10012553 vs. ExPASy TrEMBL
Match: A0A1S3AXJ8 (phylloplanin-like OS=Cucumis melo OX=3656 GN=LOC103483853 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 2.0e-26 Identity = 75/147 (51.02%), Postives = 97/147 (65.99%), Query Frame = 0
BLAST of HG10012553 vs. TAIR 10
Match: AT3G16660.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 89.0 bits (219), Expect = 3.4e-18 Identity = 60/140 (42.86%), Postives = 85/140 (60.71%), Query Frame = 0
BLAST of HG10012553 vs. TAIR 10
Match: AT3G16670.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 82.8 bits (203), Expect = 2.5e-16 Identity = 56/132 (42.42%), Postives = 78/132 (59.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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