Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAAATTTACATTTAGGAATGGAGCGTTGGCTCTTGTTCTGGCATTGCTGGTTGTAGGATTGGCTGAAGGCCGAAAGTTGGAGAAGGAGACGCTTGGTGGTGGCGGTGGACTTGGAGGTGGAGGTGGAGGTGGAGGCGGCCTTGGTCTTGGTTTCGGAGGTGGCCATGGAGGTGGCTTAGGAGGTGGAGGTGGATTAGGAGGAGGTGGTGGCTTAGGAGGTGGAGGTGGATTAGGAGGCGGAGCTGGTGGTGGAGGTGGCTTAGGAGGCGGAGGTGGCTTAGGAGGTGGTAAGGGAGGTGGATTTGGAGGCGGAGCTGGTGGCGGAGCAGGAGGTGGAGCTGGTGGTGGAGCTGGAGGTGGATTTGGAGGTGGTAAGGGAGGTGGATTCGGAGGTGGAGCTGGAGGTGGAGCAGGAGGTGGAGCTGGTGGTGGATTTGGAGGTGGTAAGGGAGGTGGATTCGGAGGCGGAGCTGGTGGTGGAGCTGGTGGCGGAGCAGGAGGTGGAGCTGGAGGTGGATTTGGAGGCGGAGCTGGCGGTGGAGCTGGTGGCGGAGCGGGAGGTGGATTTGGAGGCGGAGCTGGAGGTGGAGGTGGTCATGGCGGCGGAGCAGGAGGTGGTTTCGGAGGTGGCAAAGGAGGTGGATTTGGAGGCGGAGCAGGTGGTGGTTTTGGGGGTGGAGCAGGTGGAGGAGGAGGCTTTGGCGGCGGCTCTGGTGGAGGAATCGGTGGTAGAGTCTAA
mRNA sequence
ATGGCCAAATTTACATTTAGGAATGGAGCGTTGGCTCTTGTTCTGGCATTGCTGGTTGTAGGATTGGCTGAAGGCCGAAAGTTGGAGAAGGAGACGCTTGGTGGTGGCGGTGGACTTGGAGGTGGAGGTGGAGGTGGAGGCGGCCTTGGTCTTGGTTTCGGAGGTGGCCATGGAGGTGGCTTAGGAGGTGGAGGTGGATTAGGAGGAGGTGGTGGCTTAGGAGGTGGAGGTGGATTAGGAGGCGGAGCTGGTGGTGGAGGTGGCTTAGGAGGCGGAGGTGGCTTAGGAGGTGGTAAGGGAGGTGGATTTGGAGGCGGAGCTGGTGGCGGAGCAGGAGGTGGAGCTGGTGGTGGAGCTGGAGGTGGATTTGGAGGTGGTAAGGGAGGTGGATTCGGAGGTGGAGCTGGAGGTGGAGCAGGAGGTGGAGCTGGTGGTGGATTTGGAGGTGGTAAGGGAGGTGGATTCGGAGGCGGAGCTGGTGGTGGAGCTGGTGGCGGAGCAGGAGGTGGAGCTGGAGGTGGATTTGGAGGCGGAGCTGGCGGTGGAGCTGGTGGCGGAGCGGGAGGTGGATTTGGAGGCGGAGCTGGAGGTGGAGGTGGTCATGGCGGCGGAGCAGGAGGTGGTTTCGGAGGTGGCAAAGGAGGTGGATTTGGAGGCGGAGCAGGTGGTGGTTTTGGGGGTGGAGCAGGTGGAGGAGGAGGCTTTGGCGGCGGCTCTGGTGGAGGAATCGGTGGTAGAGTCTAA
Coding sequence (CDS)
ATGGCCAAATTTACATTTAGGAATGGAGCGTTGGCTCTTGTTCTGGCATTGCTGGTTGTAGGATTGGCTGAAGGCCGAAAGTTGGAGAAGGAGACGCTTGGTGGTGGCGGTGGACTTGGAGGTGGAGGTGGAGGTGGAGGCGGCCTTGGTCTTGGTTTCGGAGGTGGCCATGGAGGTGGCTTAGGAGGTGGAGGTGGATTAGGAGGAGGTGGTGGCTTAGGAGGTGGAGGTGGATTAGGAGGCGGAGCTGGTGGTGGAGGTGGCTTAGGAGGCGGAGGTGGCTTAGGAGGTGGTAAGGGAGGTGGATTTGGAGGCGGAGCTGGTGGCGGAGCAGGAGGTGGAGCTGGTGGTGGAGCTGGAGGTGGATTTGGAGGTGGTAAGGGAGGTGGATTCGGAGGTGGAGCTGGAGGTGGAGCAGGAGGTGGAGCTGGTGGTGGATTTGGAGGTGGTAAGGGAGGTGGATTCGGAGGCGGAGCTGGTGGTGGAGCTGGTGGCGGAGCAGGAGGTGGAGCTGGAGGTGGATTTGGAGGCGGAGCTGGCGGTGGAGCTGGTGGCGGAGCGGGAGGTGGATTTGGAGGCGGAGCTGGAGGTGGAGGTGGTCATGGCGGCGGAGCAGGAGGTGGTTTCGGAGGTGGCAAAGGAGGTGGATTTGGAGGCGGAGCAGGTGGTGGTTTTGGGGGTGGAGCAGGTGGAGGAGGAGGCTTTGGCGGCGGCTCTGGTGGAGGAATCGGTGGTAGAGTCTAA
Protein sequence
MAKFTFRNGALALVLALLVVGLAEGRKLEKETLGGGGGLGGGGGGGGGLGLGFGGGHGGGLGGGGGLGGGGGLGGGGGLGGGAGGGGGLGGGGGLGGGKGGGFGGGAGGGAGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGAGGGFGGGAGGGAGGGAGGGFGGGAGGGGGHGGGAGGGFGGGKGGGFGGGAGGGFGGGAGGGGGFGGGSGGGIGGRV
Homology
BLAST of HG10012501 vs. NCBI nr
Match:
XP_038889055.1 (glycine-rich cell wall structural protein-like isoform X1 [Benincasa hispida])
HSP 1 Score: 140.2 bits (352), Expect = 2.4e-29
Identity = 225/259 (86.87%), Postives = 225/259 (86.87%), Query Frame = 0
Query: 1 MAKFTFRNGALALVLALLVVGLAEGRKLEKETLGGGGGLGGGGGGGGGLGLGFGGGHGGG 60
M F FRNGALALVL LLVVGLAE RKLEKETLGGGGGLGGG GGG GLGLGFGGGHGGG
Sbjct: 20 MTNFRFRNGALALVLVLLVVGLAESRKLEKETLGGGGGLGGGAGGGLGLGLGFGGGHGGG 79
Query: 61 LGGGGGLGGGGGLGGGGGLGGGAGGGGGLGG------------GGGLGGGKGGGFGGGAG 120
LGGGGGLGGGGGLGGG G GGG GGGGGLGG GGG GGG GGG GGGAG
Sbjct: 80 LGGGGGLGGGGGLGGGAGGGGGLGGGGGLGGGGGAGGGFGGGAGGGAGGGAGGGVGGGAG 139
Query: 121 GGAGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAG 180
GGAGGG GGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAG
Sbjct: 140 GGAGGGFGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAG 199
Query: 181 GGAGGGFGGGAGGGAGGGAGGGFGGGAGGGGGHGGGAGGGFGGGKGGGFGGGAGGGFGGG 240
GGAGGG GGGAGGG GGG GGGFGGG GGGHGGG GGGFGGGKGGGFGGGAGGGFGGG
Sbjct: 200 GGAGGGAGGGAGGGFGGGKGGGFGGGV--GGGHGGGVGGGFGGGKGGGFGGGAGGGFGGG 259
Query: 241 AGGGGGFGGGSGGGIGGRV 248
AGGGGG GGGSGGGIGGRV
Sbjct: 260 AGGGGGVGGGSGGGIGGRV 276
BLAST of HG10012501 vs. NCBI nr
Match:
XP_038889077.1 (glycine-rich cell wall structural protein-like isoform X2 [Benincasa hispida])
HSP 1 Score: 137.1 bits (344), Expect = 2.0e-28
Identity = 214/247 (86.64%), Postives = 214/247 (86.64%), Query Frame = 0
Query: 1 MAKFTFRNGALALVLALLVVGLAEGRKLEKETLGGGGGLGGGGGGGGGLGLGFGGGHGGG 60
M F FRNGALALVL LLVVGLAE RKLEKETLGGGGGLGGG GGG GLGLGFGGGH
Sbjct: 20 MTNFRFRNGALALVLVLLVVGLAESRKLEKETLGGGGGLGGGAGGGLGLGLGFGGGH--- 79
Query: 61 LGGGGGLGGGGGLGGGGGLGGGAGGGGGLGGGGGLGGGKGGGFGGGAGGGAGGGAGGGAG 120
GGGLGGGGGLGGGGGLGGGAGGGGGL GGG GGGAGGGAGGG GGGAG
Sbjct: 80 ---GGGLGGGGGLGGGGGLGGGAGGGGGL----------GGGVGGGAGGGAGGGFGGGAG 139
Query: 121 GGFGGGKGGGFGGGAGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGAGGGFGGGAG 180
GGFGGGKGGGFGGGAGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGAGGG GGGAG
Sbjct: 140 GGFGGGKGGGFGGGAGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGAGGGAGGGAG 199
Query: 181 GGAGGGAGGGFGGGAGGGGGHGGGAGGGFGGGKGGGFGGGAGGGFGGGAGGGGGFGGGSG 240
GG GGG GGGFGGG GGGHGGG GGGFGGGKGGGFGGGAGGGFGGGAGGGGG GGGSG
Sbjct: 200 GGFGGGKGGGFGGGV--GGGHGGGVGGGFGGGKGGGFGGGAGGGFGGGAGGGGGVGGGSG 248
Query: 241 GGIGGRV 248
GGIGGRV
Sbjct: 260 GGIGGRV 248
BLAST of HG10012501 vs. NCBI nr
Match:
XP_022955577.1 (glycine-rich cell wall structural protein 1.8-like isoform X3 [Cucurbita moschata])
HSP 1 Score: 106.3 bits (264), Expect = 3.8e-19
Identity = 216/265 (81.51%), Postives = 220/265 (83.02%), Query Frame = 0
Query: 1 MAKFTFRNGALALVLALLVVGLAEGRKLEKETLGG------GGGLGGGGGGGGGLGLGFG 60
MAK T++ GALALVLA L+VG AE RKLEKETLGG GGG GGG G GGGLG GFG
Sbjct: 1 MAKLTYKVGALALVLAFLIVGFAESRKLEKETLGGGLGGGAGGGFGGGAGAGGGLGGGFG 60
Query: 61 GGHGGGLGGGGGLGGGGGLGG------GGGLGGGAGGGGGLGGGGGLGGGKGGGFGGGAG 120
GGHGGGLGGGGGLGGGGGLGG GGG GGG GGGGGLGGGGGLGGG GGG GGGAG
Sbjct: 61 GGHGGGLGGGGGLGGGGGLGGGAGGGFGGGHGGGIGGGGGLGGGGGLGGGAGGGAGGGAG 120
Query: 121 GGAGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAG 180
GG GGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGG GGGAGGG GGG G
Sbjct: 121 GGFGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGA----GGGAGGGFGGGHG 180
Query: 181 GGAGGGFGGGAGGGAGGGAGGGFGGGAGG--GGGHGGGAGGGFGGGKGGGF----GGGAG 240
GGAGGGFGGGAGGGAGGG GGG GGGAGG GGGHGGG GGGFGGGKGGGF GGGAG
Sbjct: 181 GGAGGGFGGGAGGGAGGGFGGGAGGGAGGGFGGGHGGGVGGGFGGGKGGGFGGGAGGGAG 240
Query: 241 GGFGGGAGG--GGGFGGGSGGGIGG 246
GGFGGGAGG GGGFGGG GGG+GG
Sbjct: 241 GGFGGGAGGGAGGGFGGGHGGGVGG 261
BLAST of HG10012501 vs. NCBI nr
Match:
XP_022955582.1 (glycine-rich cell wall structural protein 1.8-like isoform X8 [Cucurbita moschata])
HSP 1 Score: 103.6 bits (257), Expect = 2.5e-18
Identity = 223/281 (79.36%), Postives = 227/281 (80.78%), Query Frame = 0
Query: 1 MAKFTFRNGALALVLALLVVGLAEGRKLEKETLGG------GGGLGGGGGGGGGLGLGFG 60
MAK T++ GALALVLA L+VG AE RKLEKETLGG GGG GGG G GGGLG GFG
Sbjct: 1 MAKLTYKVGALALVLAFLIVGFAESRKLEKETLGGGLGGGAGGGFGGGAGAGGGLGGGFG 60
Query: 61 GGHGGGLGGGGGLGGGGGLGG------GGGLGGGAGGGGGLGGGGGL--------GGGKG 120
GGHGGGLGGGGGLGGGGGLGG GGG GGG GGGGGLGGGGGL GGGKG
Sbjct: 61 GGHGGGLGGGGGLGGGGGLGGGAGGGFGGGHGGGIGGGGGLGGGGGLGGGAGGGFGGGKG 120
Query: 121 GGFGGGAGGGA----GGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGF----GGGKG 180
GGFGGGAGGGA GGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGF GGG G
Sbjct: 121 GGFGGGAGGGAGGGFGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGAGGGAG 180
Query: 181 GGFGGGAGGGAGGGAGGGAGGGFGGGAGGGAGGGAGGGFGGGAGG--GGGHGGGAGGGFG 240
GGFGGG GGGAGGG GGGAGGGFGGGAGGGAGGG GGG GGGAGG GGGHGGG GGGFG
Sbjct: 181 GGFGGGHGGGAGGGFGGGAGGGFGGGAGGGAGGGFGGGAGGGAGGGFGGGHGGGVGGGFG 240
Query: 241 GGKGGGF----GGGAGGGFGGGAGG--GGGFGGGSGGGIGG 246
GGKGGGF GGGAGGGFGGGAGG GGGFGGG GGG+GG
Sbjct: 241 GGKGGGFGGGAGGGAGGGFGGGAGGGAGGGFGGGHGGGVGG 281
BLAST of HG10012501 vs. NCBI nr
Match:
XP_023526914.1 (glycine-rich cell wall structural protein-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 102.1 bits (253), Expect = 7.2e-18
Identity = 219/273 (80.22%), Postives = 222/273 (81.32%), Query Frame = 0
Query: 1 MAKFTFRNGALALVLALLVVGLAEGRKLEKETLGG--GGGLGGGGGG------GGGLGLG 60
MAK T++ G LALVLA L+VG AE RKLEKETLGG GGG GGG GG GGGLG G
Sbjct: 1 MAKITYKVGGLALVLAFLIVGFAESRKLEKETLGGGLGGGAGGGFGGGAGAGAGGGLGGG 60
Query: 61 FGGGHGGGLGGGGGLGGGGGLGG------GGGLGGGAGGGGGLGG--GGGLGGGKGGGFG 120
FGGGHGGGLGGGGGLGGGGGLGG GGG GGG GGGGGLGG GGG GGGKGGGFG
Sbjct: 61 FGGGHGGGLGGGGGLGGGGGLGGGAGGGFGGGHGGGIGGGGGLGGGAGGGFGGGKGGGFG 120
Query: 121 GGAGGGA--------GGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGKGGGFG 180
GGAGGGA GGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGG GGG G
Sbjct: 121 GGAGGGAGGGAGGGFGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGAGGGAG 180
Query: 181 GGAGGGAGGGAGGGAGGGFGGGAGGGAGGGAGGGFGGGAGG--GGGHGGGAGGGFGGGKG 240
GGAGGG GGG GGGAGGGFGGGAGGG GGGAGGG GGG GG GGG GGG GGG GGG G
Sbjct: 181 GGAGGGFGGGHGGGAGGGFGGGAGGGFGGGAGGGAGGGFGGGAGGGAGGGFGGGHGGGAG 240
Query: 241 GGFGGGAGGGFGGGAGGGGGFGGGSGGGIGGRV 248
GGFGGG GGGFGGGAGGGGGFGGGSGGG GGRV
Sbjct: 241 GGFGGGKGGGFGGGAGGGGGFGGGSGGGFGGRV 273
BLAST of HG10012501 vs. ExPASy TrEMBL
Match:
A0A6J1GU15 (glycine-rich cell wall structural protein 1.8-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111457550 PE=4 SV=1)
HSP 1 Score: 106.3 bits (264), Expect = 1.9e-19
Identity = 216/265 (81.51%), Postives = 220/265 (83.02%), Query Frame = 0
Query: 1 MAKFTFRNGALALVLALLVVGLAEGRKLEKETLGG------GGGLGGGGGGGGGLGLGFG 60
MAK T++ GALALVLA L+VG AE RKLEKETLGG GGG GGG G GGGLG GFG
Sbjct: 1 MAKLTYKVGALALVLAFLIVGFAESRKLEKETLGGGLGGGAGGGFGGGAGAGGGLGGGFG 60
Query: 61 GGHGGGLGGGGGLGGGGGLGG------GGGLGGGAGGGGGLGGGGGLGGGKGGGFGGGAG 120
GGHGGGLGGGGGLGGGGGLGG GGG GGG GGGGGLGGGGGLGGG GGG GGGAG
Sbjct: 61 GGHGGGLGGGGGLGGGGGLGGGAGGGFGGGHGGGIGGGGGLGGGGGLGGGAGGGAGGGAG 120
Query: 121 GGAGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAG 180
GG GGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGG GGGAGGG GGG G
Sbjct: 121 GGFGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGA----GGGAGGGFGGGHG 180
Query: 181 GGAGGGFGGGAGGGAGGGAGGGFGGGAGG--GGGHGGGAGGGFGGGKGGGF----GGGAG 240
GGAGGGFGGGAGGGAGGG GGG GGGAGG GGGHGGG GGGFGGGKGGGF GGGAG
Sbjct: 181 GGAGGGFGGGAGGGAGGGFGGGAGGGAGGGFGGGHGGGVGGGFGGGKGGGFGGGAGGGAG 240
Query: 241 GGFGGGAGG--GGGFGGGSGGGIGG 246
GGFGGGAGG GGGFGGG GGG+GG
Sbjct: 241 GGFGGGAGGGAGGGFGGGHGGGVGG 261
BLAST of HG10012501 vs. ExPASy TrEMBL
Match:
A0A6J1GU19 (glycine-rich cell wall structural protein 1.8-like isoform X8 OS=Cucurbita moschata OX=3662 GN=LOC111457550 PE=4 SV=1)
HSP 1 Score: 103.6 bits (257), Expect = 1.2e-18
Identity = 223/281 (79.36%), Postives = 227/281 (80.78%), Query Frame = 0
Query: 1 MAKFTFRNGALALVLALLVVGLAEGRKLEKETLGG------GGGLGGGGGGGGGLGLGFG 60
MAK T++ GALALVLA L+VG AE RKLEKETLGG GGG GGG G GGGLG GFG
Sbjct: 1 MAKLTYKVGALALVLAFLIVGFAESRKLEKETLGGGLGGGAGGGFGGGAGAGGGLGGGFG 60
Query: 61 GGHGGGLGGGGGLGGGGGLGG------GGGLGGGAGGGGGLGGGGGL--------GGGKG 120
GGHGGGLGGGGGLGGGGGLGG GGG GGG GGGGGLGGGGGL GGGKG
Sbjct: 61 GGHGGGLGGGGGLGGGGGLGGGAGGGFGGGHGGGIGGGGGLGGGGGLGGGAGGGFGGGKG 120
Query: 121 GGFGGGAGGGA----GGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGF----GGGKG 180
GGFGGGAGGGA GGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGF GGG G
Sbjct: 121 GGFGGGAGGGAGGGFGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGAGGGAG 180
Query: 181 GGFGGGAGGGAGGGAGGGAGGGFGGGAGGGAGGGAGGGFGGGAGG--GGGHGGGAGGGFG 240
GGFGGG GGGAGGG GGGAGGGFGGGAGGGAGGG GGG GGGAGG GGGHGGG GGGFG
Sbjct: 181 GGFGGGHGGGAGGGFGGGAGGGFGGGAGGGAGGGFGGGAGGGAGGGFGGGHGGGVGGGFG 240
Query: 241 GGKGGGF----GGGAGGGFGGGAGG--GGGFGGGSGGGIGG 246
GGKGGGF GGGAGGGFGGGAGG GGGFGGG GGG+GG
Sbjct: 241 GGKGGGFGGGAGGGAGGGFGGGAGGGAGGGFGGGHGGGVGG 281
BLAST of HG10012501 vs. ExPASy TrEMBL
Match:
A0A6J1GVG5 (glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457550 PE=4 SV=1)
HSP 1 Score: 99.0 bits (245), Expect = 3.0e-17
Identity = 216/273 (79.12%), Postives = 220/273 (80.59%), Query Frame = 0
Query: 1 MAKFTFRNGALALVLALLVVGLAEGRKLEKETLGG------GGGLGGGGGGGGGLGLGFG 60
MAK T++ GALALVLA L+VG AE RKLEKETLGG GGG GGG G GGGLG GFG
Sbjct: 1 MAKLTYKVGALALVLAFLIVGFAESRKLEKETLGGGLGGGAGGGFGGGAGAGGGLGGGFG 60
Query: 61 GGHGGGLGGGGGLGGGGGLGG------GGGLGGGAGGGGGLGGGGGLGGGKGGGFGGGAG 120
GGHGGGLGGGGGLGGGGGLGG GGG GGG GGGGGLGGGGGLGGG GGGFGGG G
Sbjct: 61 GGHGGGLGGGGGLGGGGGLGGGAGGGFGGGHGGGIGGGGGLGGGGGLGGGAGGGFGGGKG 120
Query: 121 GGAGGGAGGGAGGGF----GGGKGGGFGGGAGGGAGGGAGGGFGGGKGGGFGGGAGGGAG 180
GG GGGAGGGAGGGF GGG GGGFGGG GGG GGGAGGG GGG GGGFGGGAGGGAG
Sbjct: 121 GGFGGGAGGGAGGGFGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGAGGGAG 180
Query: 181 GGAGGGAGGGFGGGAGGGAGGGAGGGFGGGAGG------GGGHGGGAGGGFGGGKGGGF- 240
GG GGG GGG GGG GGGAGGGAGGGFGGGAGG GGGHGGG GGGFGGGKGGGF
Sbjct: 181 GGFGGGHGGGAGGGFGGGAGGGAGGGFGGGAGGGAGGGFGGGHGGGVGGGFGGGKGGGFG 240
Query: 241 ---GGGAGGGFGGGAGG--GGGFGGGSGGGIGG 246
GGGAGGGFGGGAGG GGGFGGG GGG+GG
Sbjct: 241 GGAGGGAGGGFGGGAGGGAGGGFGGGHGGGVGG 273
BLAST of HG10012501 vs. ExPASy TrEMBL
Match:
A0A6J1GU56 (glycine-rich cell wall structural protein 1.8-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457550 PE=4 SV=1)
HSP 1 Score: 97.4 bits (241), Expect = 8.6e-17
Identity = 212/265 (80.00%), Postives = 216/265 (81.51%), Query Frame = 0
Query: 1 MAKFTFRNGALALVLALLVVGLAEGRKLEKETLGG------GGGLGGGGGGGGGLGLGFG 60
MAK T++ GALALVLA L+VG AE RKLEKETLGG GGG GGG G GGGLG GFG
Sbjct: 1 MAKLTYKVGALALVLAFLIVGFAESRKLEKETLGGGLGGGAGGGFGGGAGAGGGLGGGFG 60
Query: 61 GGHGGGLGGGGGLGGGGGLGG------GGGLGGGAGGGGGLGGGGGLGGGKGGGFGGGAG 120
GGHGGGLGGGGGLGGGGGLGG GGG GGG GGGGGLGGGGGLGGG GGGFGGG G
Sbjct: 61 GGHGGGLGGGGGLGGGGGLGGGAGGGFGGGHGGGIGGGGGLGGGGGLGGGAGGGFGGGKG 120
Query: 121 GGAGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAG 180
GG GGGAGGGAGGGFGGG GGGAGGG GGG GGGFGGG GGG GGGAGGG GGG G
Sbjct: 121 GGFGGGAGGGAGGGFGGGA----GGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGHG 180
Query: 181 GGAGGGFGGGAGGGAGGGAGGGFGGGAGG--GGGHGGGAGGGFGGGKGGGF----GGGAG 240
GGAGGGFGGGAGGGAGGG GGG GGGAGG GGGHGGG GGGFGGGKGGGF GGGAG
Sbjct: 181 GGAGGGFGGGAGGGAGGGFGGGAGGGAGGGFGGGHGGGVGGGFGGGKGGGFGGGAGGGAG 240
Query: 241 GGFGGGAGG--GGGFGGGSGGGIGG 246
GGFGGGAGG GGGFGGG GGG+GG
Sbjct: 241 GGFGGGAGGGAGGGFGGGHGGGVGG 261
BLAST of HG10012501 vs. ExPASy TrEMBL
Match:
A0A6J1GUD3 (glycine-rich cell wall structural protein 1.8-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111457550 PE=4 SV=1)
HSP 1 Score: 92.4 bits (228), Expect = 2.8e-15
Identity = 213/265 (80.38%), Postives = 217/265 (81.89%), Query Frame = 0
Query: 1 MAKFTFRNGALALVLALLVVGLAEGRKLEKETLGG------GGGLGGGGGGGGGLGLGFG 60
MAK T++ GALALVLA L+VG AE RKLEKETLGG GGG GGG G GGGLG GFG
Sbjct: 1 MAKLTYKVGALALVLAFLIVGFAESRKLEKETLGGGLGGGAGGGFGGGAGAGGGLGGGFG 60
Query: 61 GGHGGGLGGGGGLGGGGGLGGGGGLGGGAGGGGGLGG--GGGLGGGKGGGFGGGAGGGA- 120
GGHGGGLGGG G G GGG GGG G GGG GGGGGLGG GGG GGGKGGGFGGGAGGGA
Sbjct: 61 GGHGGGLGGGAGGGFGGGHGGGIGGGGGLGGGGGLGGGAGGGFGGGKGGGFGGGAGGGAG 120
Query: 121 ---GGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAG 180
GGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGG GGGAGGG GGG G
Sbjct: 121 GGFGGGAGGGAGGGFGGGKGGGFGGGAGGGAGGGAGGGFGGGA----GGGAGGGFGGGHG 180
Query: 181 GGAGGGFGGGAGGGAGGGAGGGFGGGAGG--GGGHGGGAGGGFGGGKGGGF----GGGAG 240
GGAGGGFGGGAGGGAGGG GGG GGGAGG GGGHGGG GGGFGGGKGGGF GGGAG
Sbjct: 181 GGAGGGFGGGAGGGAGGGFGGGAGGGAGGGFGGGHGGGVGGGFGGGKGGGFGGGAGGGAG 240
Query: 241 GGFGGGAGG--GGGFGGGSGGGIGG 246
GGFGGGAGG GGGFGGG GGG+GG
Sbjct: 241 GGFGGGAGGGAGGGFGGGHGGGVGG 261
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038889055.1 | 2.4e-29 | 86.87 | glycine-rich cell wall structural protein-like isoform X1 [Benincasa hispida] | [more] |
| XP_038889077.1 | 2.0e-28 | 86.64 | glycine-rich cell wall structural protein-like isoform X2 [Benincasa hispida] | [more] |
| XP_022955577.1 | 3.8e-19 | 81.51 | glycine-rich cell wall structural protein 1.8-like isoform X3 [Cucurbita moschat... | [more] |
| XP_022955582.1 | 2.5e-18 | 79.36 | glycine-rich cell wall structural protein 1.8-like isoform X8 [Cucurbita moschat... | [more] |
| XP_023526914.1 | 7.2e-18 | 80.22 | glycine-rich cell wall structural protein-like [Cucurbita pepo subsp. pepo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1GU15 | 1.9e-19 | 81.51 | glycine-rich cell wall structural protein 1.8-like isoform X3 OS=Cucurbita mosch... | [more] |
| A0A6J1GU19 | 1.2e-18 | 79.36 | glycine-rich cell wall structural protein 1.8-like isoform X8 OS=Cucurbita mosch... | [more] |
| A0A6J1GVG5 | 3.0e-17 | 79.12 | glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Cucurbita mosch... | [more] |
| A0A6J1GU56 | 8.6e-17 | 80.00 | glycine-rich cell wall structural protein 1.8-like isoform X2 OS=Cucurbita mosch... | [more] |
| A0A6J1GUD3 | 2.8e-15 | 80.38 | glycine-rich cell wall structural protein 1.8-like isoform X4 OS=Cucurbita mosch... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
