
HG10012183 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCAACAGGGCCTGGGTATTTTAAGCGTGTTGGGCCTGGGCTGCGGTGTGGTGTCCATATACATAAATACTGACGAATTTTCAAAAATTAAGAAAATATCATTTTAATTTTCATTTCAATTCCGAGTTCATTCAGTCCTTTAATTAAGTAATCTTTGACATTTCTTTAATTAAGTAATCTTTGACATTTCTTTAATATTTTTAAATAAGTAATCTCAATGGATGCCATTAGACTGCAGTGTCCATATACTTTGAACCCATGAATTTTCAAAATTAAAAAAAAACTATTTCATTTCAATCTTTAAAACTCTTTTGTGCCTTTTTTTTTTCTAGTGTAATTTTATTAGGGATGATTCGGGAAATCAGAGAGGAATTGATAATATAACTCAAGGTATGTTGAATTTTTTCTCTTTTATTTATAACTTTTATCTTAATATTTTTTTCTCTTTTATTTATGACTTTATCTTAATATTTCAAATATATTCTAGGCTTGGAAGACATAAAAGGCTTTGATGATGACGAGTGGATAAATGAATATTACAAAATTACAGTTCAAAGCAAAGGTAATTATATATATATATATATATTAATTTTTTAAATATTAACTTAGTTTGTTAATGTCAAATGTAGAGCCTTCAGAGTCTTCAACCCTTCGTGTATACAGTCGGCGGCGAAAGGGAAAGAATTGATGCTTCGAGTCAGTTATTTGGTTTCGGCTTGTAAAACTACGGCAAAGTATATACATTGTACATTCATTTACGTAGATACATTTCTATATACTTTTGCTTTTGATATGGCAAAGTATATTACATTGTACATTCATTTACATTTACTTATACTTTTGATATAATAGATTCATAGATTGGGATCTAATATAGAAGAAAATTTTGTTTTTATTTCCAACCATTCCGTTTTTTTTTGTTCGTTAACAAAGTTTTGAAATGTCAATTTCAACAAAAATGTTAGGTCCTACGTAAATCTGAAATCTGAAATATTCATAAAATGTCAATACATTAAACAACAAAAAAGAATGAAAGTTATAAAACTACTCTGAGACAAAGTTAAGAACAGAAGATAGACAAAGAATTTCAATCAAGAATTTGTACAACAAAGTGAAACAAAAGATACCAAAAAAACAACCAACCAATTGGAAACGCTTGTTGATAGAATGATAGGGATAGTCAAACTCAATTTTAATCCCTCAAAATCAATTAAATATTTAATTTTACATTTTTAAATGCAATCTCCATACTATTAAAATTGATTTTTAGATTGAAGAGCTCCCATGGGTACCCCATACTACAACAAATACAAAAGCAATCGGTCTTTAAGGACAATATTCCGAAAGATAACTCACTAAAACTGAAATCCGAACAAAGAAAGAGCGCAGGGAAATTACATTCACCCACACGCGGTTTGATCTAGAGGAGCAAGATGAGAACGCTGCTAATCTAAAGATATTCATCTTAATAGATTAGATCTGTTTGTGTAGAGCCCAAATTGAGGGCCGATCTCTGACGCTGAGCTCTCAATGAATCCTTCTAAGCTCAGATTGATGAAACTGCAGGGTAGGGTTTGGAGATTAGCCGCCGCCTGGTAGGGTTAGCGTGCGTTTGGAGAGAGAGAGGCAGCGTGCGTTCGTGGAAGGTAGAAGGTAGAAATAGCCGTTCCACATCTTCCAATTCTTAACTGGTCTATTAAAAAAAAGGCCCAAAAGCCTTCTTCCGAGGCAGCCCAAAAACTTTTTTAACCCTAAATATTTTTCCTATATATATACTTTTTCTTTTCTTTTTTAGTTTATGGGAAATTACTATTTTAGCTAAATTATTCCAAATACAAATAAAGAAGTAAAAATGGGATAAGCTCGGCACACGACTCCGTTGATAAGAACCAAATATGAAACATATTCCGCGTAATCAATCGCCTTGTCAATCCATTGATAAGAACCAAATACGAAACATATTCCACATAATCAATTACCTTGCCAACCTTTTGTTGCTGAAACTCATCTTGACCATAATTTTTTAAATGAAACTCCATTCAACTGCAAGGTTCGAAATATCGATGTTGATAGAATCGAGACTCAAATTTTATAAAAATATCGATGAAAATTATCAATATCAGTGGAAATTTCGGCACTTTATGGAAATTGATGGAAATTGTTATAATAAGTTAATGAAACTATGATTGTAATTGAGTTAGCTTATAATTGATCATTTTTAACCATTGTTTTTATAAAGTAAGACAATATTTAGATGTATATTATAAAATATTTGTGTAAATATCAATGCGAGAGCAAAAATTTAAAAAAATGGAAAAATAATTACAAAATTAAAGAAGATGAAATATTTACATATAAAATAATTGTAAATCGTTTATTATAAAATTAAATGTATACAAAAGTGAAAAATCATAACATTAAACTAACATAACATAATAAGGATAGAAAATCATAACATTAAAACAAAAAGAATGTAAAAAGCATAACATTAAACATAACACAACACAATGGAAAAAAAAAAAAGAAAAAAAAAAAAGCTCTAGAAGTAGATAGAGCTTGAGAGAAAATGAGAGGAATATTAAAGAACTCACAACAATTCCAATTTGAGGTGAAATTATGTGAAAATTCAATAGAAAAGATTTGAATGAAAACATGTTGTTTCTTGATGGTAAAAGAGAAAAAAAAAAAATATATTATTGAGCTAGCATAGCTAATTGTTAAAAAAAAAAAAAATCATCGAAGGCACCCCTCTCTTTCAAGAGGATTCGTGGCATGTCAAGCCCTAGTAAGGTTCTTCGCTTTGCATCGAATTAAACCACATGCTCCATTGCTTGTGTCCTCCATCAATTCTTTTGAGTTTCATTCTTGTGAACGTACTCCCCAGACGGGATACTTAATGCGTTAGCTACATCACTACATGGGTTGATATGCACAACGACTAGTATCCATCATTTACAGCTAGGACTACTAGGGTATCTAATCCCATTCGCTCCCCTAGCTTTCGTCTCTCAGTGTCAGTGTTGGCCCAGCAGAGTGCTTTCGCCGTTGATGTTCTTTACGATCTCTACGCATTTCACCGCTCCACCATAAATTTTCTCTGCCCCTACCATACTCTAGCTTGGTAG ATGCCAACAGGGCCTGGGTATTTTAAGCGTGTTGGGCCTGGGCTGCGGGATGATTCGGGAAATCAGAGAGGAATTGATAATATAACTCAAGGCTTGGAAGACATAAAAGGCTTTGATGATGACGAGTGGATAAATGAATATTACAAAATTACAGTTCAAAGCAAAGCTAGGACTACTAGGGTATCTAATCCCATTCGCTCCCCTAGCTTTCGTCTCTCAGTGTCAGTGTTGGCCCAGCAGAGTGCTTTCGCCGTTGATGTTCTTTACGATCTCTACGCATTTCACCGCTCCACCATAAATTTTCTCTGCCCCTACCATACTCTAGCTTGGTAG ATGCCAACAGGGCCTGGGTATTTTAAGCGTGTTGGGCCTGGGCTGCGGGATGATTCGGGAAATCAGAGAGGAATTGATAATATAACTCAAGGCTTGGAAGACATAAAAGGCTTTGATGATGACGAGTGGATAAATGAATATTACAAAATTACAGTTCAAAGCAAAGCTAGGACTACTAGGGTATCTAATCCCATTCGCTCCCCTAGCTTTCGTCTCTCAGTGTCAGTGTTGGCCCAGCAGAGTGCTTTCGCCGTTGATGTTCTTTACGATCTCTACGCATTTCACCGCTCCACCATAAATTTTCTCTGCCCCTACCATACTCTAGCTTGGTAG MPTGPGYFKRVGPGLRDDSGNQRGIDNITQGLEDIKGFDDDEWINEYYKITVQSKARTTRVSNPIRSPSFRLSVSVLAQQSAFAVDVLYDLYAFHRSTINFLCPYHTLAW Homology
BLAST of HG10012183 vs. NCBI nr
Match: KAD0858377.1 (hypothetical protein E3N88_43610 [Mikania micrantha]) HSP 1 Score: 89.7 bits (221), Expect = 1.7e-14 Identity = 46/55 (83.64%), Postives = 47/55 (85.45%), Query Frame = 0
BLAST of HG10012183 vs. NCBI nr
Match: GEV65690.1 (reverse transcriptase domain-containing protein [Tanacetum cinerariifolium]) HSP 1 Score: 88.2 bits (217), Expect = 4.8e-14 Identity = 46/54 (85.19%), Postives = 47/54 (87.04%), Query Frame = 0
BLAST of HG10012183 vs. NCBI nr
Match: GEW12511.1 (reverse transcriptase domain-containing protein [Tanacetum cinerariifolium] >GEW14203.1 reverse transcriptase domain-containing protein [Tanacetum cinerariifolium]) HSP 1 Score: 88.2 bits (217), Expect = 4.8e-14 Identity = 46/54 (85.19%), Postives = 47/54 (87.04%), Query Frame = 0
BLAST of HG10012183 vs. NCBI nr
Match: PLY97343.1 (hypothetical protein LSAT_4X145420 [Lactuca sativa]) HSP 1 Score: 87.8 bits (216), Expect = 6.3e-14 Identity = 46/53 (86.79%), Postives = 46/53 (86.79%), Query Frame = 0
BLAST of HG10012183 vs. NCBI nr
Match: KAF3449761.1 (hypothetical protein FNV43_RR05839 [Rhamnella rubrinervis]) HSP 1 Score: 86.7 bits (213), Expect = 1.4e-13 Identity = 46/56 (82.14%), Postives = 46/56 (82.14%), Query Frame = 0
BLAST of HG10012183 vs. ExPASy TrEMBL
Match: A0A5N6LGN0 (Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_43610 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 8.0e-15 Identity = 46/55 (83.64%), Postives = 47/55 (85.45%), Query Frame = 0
BLAST of HG10012183 vs. ExPASy TrEMBL
Match: A0A2J6MCN3 (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_4X145420 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 3.0e-14 Identity = 46/53 (86.79%), Postives = 46/53 (86.79%), Query Frame = 0
BLAST of HG10012183 vs. ExPASy TrEMBL
Match: A0A5N6N3J0 (Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_24680 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 1.2e-13 Identity = 45/55 (81.82%), Postives = 46/55 (83.64%), Query Frame = 0
BLAST of HG10012183 vs. ExPASy TrEMBL
Match: A0A5J5S3A3 (Uncharacterized protein (Fragment) OS=Gossypium barbadense OX=3634 GN=ES319_D03G089300v1 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.5e-13 Identity = 44/50 (88.00%), Postives = 45/50 (90.00%), Query Frame = 0
BLAST of HG10012183 vs. ExPASy TrEMBL
Match: A0A6L2P7F0 (Carotenoid cleavage dioxygenase 1 OS=Tanacetum cinerariifolium OX=118510 GN=Tci_066316 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 3.4e-13 Identity = 44/53 (83.02%), Postives = 45/53 (84.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|