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HG10012180 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTTTCGCATCTGTTGCGTACATCAGCCGGAATCTCCGACGCATGGACGGTGACGATCAATCTCTGAAAATCCGATTCCGGCATAGAAAACGTCTGATCTCCCGATCACCGTTCGCGCAACTTCCGTACGAGATCAAGAGAGAAACTTGGTTTTTTCCGTTGGGAGAAATCGAGTTGCCTCTCCCGCTGCGAAAACTGGAAGATCCGGAGTTCTGTTATGATTACATCTCTGGTTTTATGTCCTCATAA ATGCCTTTCGCATCTGTTGCGTACATCAGCCGGAATCTCCGACGCATGGACGGTGACGATCAATCTCTGAAAATCCGATTCCGGCATAGAAAACGTCTGATCTCCCGATCACCGTTCGCGCAACTTCCGTACGAGATCAAGAGAGAAACTTGGTTTTTTCCGTTGGGAGAAATCGAGTTGCCTCTCCCGCTGCGAAAACTGGAAGATCCGGAGTTCTGTTATGATTACATCTCTGGTTTTATGTCCTCATAA ATGCCTTTCGCATCTGTTGCGTACATCAGCCGGAATCTCCGACGCATGGACGGTGACGATCAATCTCTGAAAATCCGATTCCGGCATAGAAAACGTCTGATCTCCCGATCACCGTTCGCGCAACTTCCGTACGAGATCAAGAGAGAAACTTGGTTTTTTCCGTTGGGAGAAATCGAGTTGCCTCTCCCGCTGCGAAAACTGGAAGATCCGGAGTTCTGTTATGATTACATCTCTGGTTTTATGTCCTCATAA MPFASVAYISRNLRRMDGDDQSLKIRFRHRKRLISRSPFAQLPYEIKRETWFFPLGEIELPLPLRKLEDPEFCYDYISGFMSS Homology
BLAST of HG10012180 vs. NCBI nr
Match: XP_022947841.1 (NEP1-interacting protein-like 1 [Cucurbita moschata]) HSP 1 Score: 81.6 bits (200), Expect = 3.4e-12 Identity = 41/83 (49.40%), Postives = 55/83 (66.27%), Query Frame = 0
BLAST of HG10012180 vs. NCBI nr
Match: KAG6605222.1 (E3 ubiquitin-protein ligase AMFR, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 81.6 bits (200), Expect = 3.4e-12 Identity = 41/83 (49.40%), Postives = 55/83 (66.27%), Query Frame = 0
BLAST of HG10012180 vs. NCBI nr
Match: KAG6605180.1 (E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 79.3 bits (194), Expect = 1.7e-11 Identity = 39/83 (46.99%), Postives = 55/83 (66.27%), Query Frame = 0
BLAST of HG10012180 vs. NCBI nr
Match: XP_023006825.1 (NEP1-interacting protein-like 1 [Cucurbita maxima]) HSP 1 Score: 78.6 bits (192), Expect = 2.9e-11 Identity = 40/83 (48.19%), Postives = 53/83 (63.86%), Query Frame = 0
BLAST of HG10012180 vs. NCBI nr
Match: XP_023539480.1 (E3 ubiquitin-protein ligase RNF165-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 77.8 bits (190), Expect = 4.9e-11 Identity = 39/83 (46.99%), Postives = 50/83 (60.24%), Query Frame = 0
BLAST of HG10012180 vs. ExPASy TrEMBL
Match: A0A6J1G7L1 (NEP1-interacting protein-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111451601 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.6e-12 Identity = 41/83 (49.40%), Postives = 55/83 (66.27%), Query Frame = 0
BLAST of HG10012180 vs. ExPASy TrEMBL
Match: A0A6J1L186 (NEP1-interacting protein-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111499495 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.4e-11 Identity = 40/83 (48.19%), Postives = 53/83 (63.86%), Query Frame = 0
BLAST of HG10012180 vs. ExPASy TrEMBL
Match: A0A6J1G7R8 (E3 ubiquitin-protein ligase MBR2-like OS=Cucurbita moschata OX=3662 GN=LOC111451612 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.4e-11 Identity = 39/83 (46.99%), Postives = 55/83 (66.27%), Query Frame = 0
BLAST of HG10012180 vs. ExPASy TrEMBL
Match: A0A6J1L191 (E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita maxima OX=3661 GN=LOC111499501 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 4.1e-11 Identity = 39/83 (46.99%), Postives = 54/83 (65.06%), Query Frame = 0
BLAST of HG10012180 vs. ExPASy TrEMBL
Match: A0A0A0L2F8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G036440 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.2e-07 Identity = 37/83 (44.58%), Postives = 48/83 (57.83%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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