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HG10012176 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATCTCTGCAGACTCATTCTCCACTTGCGGCTTATCAGTGTATTCGGTCTTCGCCCTTGCCTCTCTCTGTAAGTTTAGTTTAGTTTCGTTTTCTTTGGTTGATTTTGTTGAGAGTTTTTTTCTTAGTTATATCTTGGATTGCCGGGGAAATGCTTGGAAGGTAGGGGGAACGTTTGATTTTGAGCTGATGAGAGGAATTATTTAGGAAAAGTTGATACAGTGGAGCCTCTATTCCTGTTATTTCGATGTTGTTCGCTCCACTTGATATAAAACGATGTTCGATTACATTGAATTAAGGTTGTTCAAGTGCGGCATGTTTCATCAAGAGACCGACGGAAGAAGAGAAAGCCGACGACGCCAGCCACTTCCAAATTGAAGAAAACTAAACTGAAATTTTACTCGTGAGTTCGTAATATTATGATTGTTATTATTTAATTTTGGATCTTTATCATTACTGTCTTGTAAGTTTGTGAGTAAATGTCGCTTTGTTGGTTGATCAGATCTTACAAGTCTAGGTTTTGGATGATGAAGGATGGGAGCATTAAACGTCGAATGGAAGGGAAAAGGCACAATGCACATTCCAAGGTTTGTCTTTCTGTTCATCAAATATTCTCCGTGGTTTAGTATCATATTGGCGTTGAAATGTAAATATTTGGAGCATCGTTTCAAGTTAGCTCATGTTCACTACATTTTCTCTGGGTTTAAATAGATATATGTGATGCTTAGTTTAGATTATCATAACATATTCCCTTGTCAATAACATAATGCTAATTTTAGTTCTCAGCTAGACGTTTAAATTGTACCACATGTTTAATTGATGCATTGTATTGTTTATCTTATAACAACTTTCTGAGATAGTTTTGAGAAATTTCTATTTTTTACTATTAGAAACAATATCGTTGGTTTCTGCTCTTCATTTGCATTTCACAACTCCCATGCTTAGGTTACTACCATCCGCTGCACATCTCTGTTTACTTTTGGAATTCTTGGCTTCTTCCTGGTAGTAATGTTCAAGTTCTTTTATTGTTTAGATTTGTGCCATGGGCATTAGAAAATCAAGCATTCAGTATTGGCACTTGCACTTGAAAGAAATTTTCCTGAAACGTTTCTATAGATCTATATATTTTCCATGTTGGCTAACTTCATAATGTACATTAGTTTATTAGAATATTTGTCCAAGCCTTAAAGCTTTTCTTCTGGAAGAGGCCAACAAGGATCAAATTTAACCAGTATATCTTTACACACAAAAAAAAGCATAAAAGAAGACGGAATCAAGAATATCCTTTGAATTCTTGTATTTCTCCTAGAAAATTCGAGCATTTCTTTCATCCCATATCTTCCACAAAACCATTGATATAATGCAAGTCCATAAGTGTTCTTTAGTATCTTTGAAAGGTAGGTCAACAAACAACAAACGGAGCCAACTTTGTGTGTCATTAAGGGATGTCACAGCCCATTGAAACGCTATAAAAAGTTCCAACCAAATCCCAGAAGTGAAGGGACAGTTGAAAAACGAGTGTAAAATGGATTCATTGTTGGAATGGCTTAGGCAGCACTAGGATGGAGAAATATTGAGCCAAGGGTATTGTTTCTGTAGATGGTCCATGGTACTTAGGCATGATTTAGTGACTTCCCACAGTAAGAATACGTTTAGGGCAGGGGCATCTCCAAATTTTCTTGTAGAACTCCTCTGTAATTGATGGCCCACTAGGCGTAATGAATGTGTATAAAGGTTTAGTGGAGAAGTAATTTTTGTCAAGCTTCCAAGTCCATGAGTCACTACTGCCAGTAAGCTCAATATTGGGGATAAAATGAGTGAATGCAGCGCATTCTGTAATTTCTTCCTCTTTGAAATGCCTTCTGAAATTCAATGTCCAAGAACAGAGCTCAATGGTCCATACCTCAGGGCTCAGCCACAGATGCCTCTTTAGAATCAGCAAGTTGATAAAGCTTGGGAAATTTTAGCTTGAGGGCGCCATCTCCAATCCAAATGTGCCAAAATGCAGTAGTAGAGCCATCTCCAATAGTGCAATGAATATTATTATAAACAAGATCTTTCTGTTTCATAATTTGACTCCATGGACTTCTAGATAAGGTGTGGTGAAAATCCGAGTCCATTAAATCAAAATGACATGAACCAAATTTGACTTTAATCATAATTCTCTAGAGGACGCTCTTTTTCTGAATGAAAAACGTCAAATCCACTTTGCAAGGAGTGCCCTATTTTGCTTCTTTTTATCAGTGATCCCCAAACCCCCTTCTTCCAAAGGTTTCTTAAGAATTTTCCAATTAAAGAAGTGGGATAAGTTGCTGCCCCTGTATCCAGACCACAAGAAGTTTCTAAAACAGTTTGTGATGTTCTCGGCCACTTTAAATGGTACTTTGAAGAGGGATCAAAAGTATGTGGGTTGATTGGCTAACGTAGCTTTCAATAGCGTCAGTTTACCTCCTTCGGAGAGATGGTTGTGTTGCCAAGAATGCAGTCTGTAAGGGACATAGTTAGAGATATATGGAGTTATTATTGGGATAATTAGTATGATGAGGGGTAAGAGGTATAAGGGTAACTAGATAGGAAGTTAGTTACTGAATATTGCTATAATAGAAGGAGTGGGAGTGGTAGGAGGGTGTGAAGACTTTTATGTTGGATTTCCTAATTGGAAATTTGGGAGAGGATTCCCAACCCTCTAGAATGTGCTGAAGTATATTGTAATTTCTTCATTGATATTGCAATATAATTCTATCTTGTAGTTTTCTTGTTTGTTCTTTGTGTTCTTGAGTTCTCTTGTTAGGAGGTATCCTAACACAATCTCTTGTCAATCTTGTCCAAAACGGGGTGCCAAAAAGATAGGGAGGAAGATTTACCATAAAGAGGGAGCCCCAAGTAGGTGGTCGGCCATTGATCCACCCTACAATCAAACTTCAAAGCAATATTTTCCACCCAAGAATCCTCACAATGGATACCCAAAAATTCTGATTTTTGTCTATTAATATTGAGACAAGAGGCTTCTTCAAAAAGACTAACCAAAATGATGAGATTTTCAATCTTCTCTTCATTGTTGGTGGAGAAAGGCAAAGTATCGTCAGCAAAAAGGAGATGATCAATGTTGATGGATGTTTGAGGCATGTCATAACCGCAAATGAATCCACTTTCAGCCGCCAAAGATAGAATTCTACTAAGACAATCCATGATAATGATAAATAAGAAAGGTGATATTAATTAAAAATATTTTACAAATCTTAAATTAGTATGATCAAGTATAATGGTCATATAAAAGAAGGGACAACACCCTTGTTATTTGCCACTAAAACAAAAAGTAATTCTATAAGGATATCTTTAACAACCTTGCTACTTTTGTCATGATAGAGATTGACTTGTAACATAAATTTTATAAATTCTTGTCTTCAATGCTTTTAAAGTCTCAATAGCAAAAGTAGTAATAGTTCAATTTGTCAAACTCAAACCTTTATGTTTTTGAAAAATGGGGCAAATTAATAGTAAAAGTAGTAATCATTATACGAATCTCATTGTGTTTTCTTTTCACAAAGGGGTAAGCCTCTTATGGTTCAAATGAGGCATAAGCCTTGAGGCAAAAAGCTAGAGGCTTGCTTTGAGGCAAGCCTTAAGGCATAAACCTCAATAACCTTTTAAAACACTACTTCACTTATGCTTTCCTTGAGTAGTGTACCCTTTGTGGAAAGGCATTTGAATCATATTTTGACTGTATGTCCAGAATCAGTTAAGGTTGTATGTCACATGCAATGTGTAAATTCCTCTCATCGGGCTCCCATATCCTATATGAAACCTAATCATGATGCGACTGCATCTTTCTATTTATTGGAAGTCCATGACATGTTAATTTAGGCTAAATTCTTAGCATCCTGTTCTTGTGATGCCCGTAAACCTATTCTGTTTAGTTAAGACTCTGGATGCCAGTAAATGTTATGATTCTTCCTTTAAGGTTTACAAATGGATGATTTTCATTTTACTCCTAAAGTTATCATCCAGCATCTTATGTCCAACAATTAGCTCTAAAGTCTTATACCTAGAAATTATTGTTGTCACCATAATGCGAGATAAAATGCGGGAGAATGTGACAAAGTCACCCTTCTTTCAAGTTGTCTTTAATGAATTGATGGTTGGTGAATGTATCGAGCAGGTGGGAAGGATTTCGTTTTATGCAAAAGTTACATTCACTTGGGGCCTCCTTGAAATAGGCCTTGAAATCTTGGAATGTATGGGGATATTAGGATCAAGAAGCAGGAAGGTTCCAAAGCAGCAAGAGATCTTGAGGAAGGTTAAGTTTCTAGATAGGCTTGAAAAGGAGGCCTCTCTTGCAGAGGTTTTCGAAGATGAGCGAGCCTATCTAAAGGCAGAATTTGGAGAGTTTGTTACTAAAGGGGTGACAAGTTGGAGGCAAAGGGCCAGAGTGAGGTGGGTAGGAAGAATTGTTAGTGGATTGTGGAAGGAGTAA ATGCATCTCTGCAGACTCATTCTCCACTTGCGGCTTATCAGTGTATTCGGTCTTCGCCCTTGCCTCTCTCTATCTTACAAGTCTAGGTTTTGGATGATGAAGGATGGGAGCATTAAACGTCGAATGGAAGGGAAAAGGCACAATGCACATTCCAAGGTGGGAAGGATTTCGTTTTATGCAAAAGTTACATTCACTTGGGGCCTCCTTGAAATAGGCCTTGAAATCTTGGAATGTATGGGGATATTAGGATCAAGAAGCAGGAAGGTTCCAAAGCAGCAAGAGATCTTGAGGAAGGTTAAGTTTCTAGATAGGCTTGAAAAGGAGGCCTCTCTTGCAGAGGTTTTCGAAGATGAGCGAGCCTATCTAAAGGCAGAATTTGGAGAGTTTGTTACTAAAGGGGTGACAAGTTGGAGGCAAAGGGCCAGAGTGAGGTGGGTAGGAAGAATTGTTAGTGGATTGTGGAAGGAGTAA ATGCATCTCTGCAGACTCATTCTCCACTTGCGGCTTATCAGTGTATTCGGTCTTCGCCCTTGCCTCTCTCTATCTTACAAGTCTAGGTTTTGGATGATGAAGGATGGGAGCATTAAACGTCGAATGGAAGGGAAAAGGCACAATGCACATTCCAAGGTGGGAAGGATTTCGTTTTATGCAAAAGTTACATTCACTTGGGGCCTCCTTGAAATAGGCCTTGAAATCTTGGAATGTATGGGGATATTAGGATCAAGAAGCAGGAAGGTTCCAAAGCAGCAAGAGATCTTGAGGAAGGTTAAGTTTCTAGATAGGCTTGAAAAGGAGGCCTCTCTTGCAGAGGTTTTCGAAGATGAGCGAGCCTATCTAAAGGCAGAATTTGGAGAGTTTGTTACTAAAGGGGTGACAAGTTGGAGGCAAAGGGCCAGAGTGAGGTGGGTAGGAAGAATTGTTAGTGGATTGTGGAAGGAGTAA MHLCRLILHLRLISVFGLRPCLSLSYKSRFWMMKDGSIKRRMEGKRHNAHSKVGRISFYAKVTFTWGLLEIGLEILECMGILGSRSRKVPKQQEILRKVKFLDRLEKEASLAEVFEDERAYLKAEFGEFVTKGVTSWRQRARVRWVGRIVSGLWKE Homology
BLAST of HG10012176 vs. NCBI nr
Match: KAA0068151.1 (50S ribosomal protein L35 [Cucumis melo var. makuwa] >TYK21070.1 50S ribosomal protein L35 [Cucumis melo var. makuwa]) HSP 1 Score: 64.3 bits (155), Expect = 1.1e-06 Identity = 29/42 (69.05%), Postives = 33/42 (78.57%), Query Frame = 0
BLAST of HG10012176 vs. NCBI nr
Match: XP_038887770.1 (uncharacterized protein LOC120077803 [Benincasa hispida]) HSP 1 Score: 63.5 bits (153), Expect = 1.8e-06 Identity = 29/31 (93.55%), Postives = 29/31 (93.55%), Query Frame = 0
BLAST of HG10012176 vs. NCBI nr
Match: XP_008460439.1 (PREDICTED: uncharacterized protein LOC103499252 [Cucumis melo]) HSP 1 Score: 62.4 bits (150), Expect = 4.0e-06 Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = 0
BLAST of HG10012176 vs. NCBI nr
Match: XP_004144409.1 (uncharacterized protein LOC101219338 [Cucumis sativus] >KGN58404.1 hypothetical protein Csa_002216 [Cucumis sativus]) HSP 1 Score: 62.4 bits (150), Expect = 4.0e-06 Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = 0
BLAST of HG10012176 vs. NCBI nr
Match: XP_022156090.1 (uncharacterized protein LOC111023059 [Momordica charantia]) HSP 1 Score: 58.5 bits (140), Expect = 5.8e-05 Identity = 26/28 (92.86%), Postives = 26/28 (92.86%), Query Frame = 0
BLAST of HG10012176 vs. ExPASy TrEMBL
Match: A0A5A7VRB4 (50S ribosomal protein L35 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00340 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 5.1e-07 Identity = 29/42 (69.05%), Postives = 33/42 (78.57%), Query Frame = 0
BLAST of HG10012176 vs. ExPASy TrEMBL
Match: A0A0A0LBT5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G638010 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.9e-06 Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = 0
BLAST of HG10012176 vs. ExPASy TrEMBL
Match: A0A1S3CDR4 (uncharacterized protein LOC103499252 OS=Cucumis melo OX=3656 GN=LOC103499252 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.9e-06 Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = 0
BLAST of HG10012176 vs. ExPASy TrEMBL
Match: A0A6J1DPB8 (uncharacterized protein LOC111023059 OS=Momordica charantia OX=3673 GN=LOC111023059 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 2.8e-05 Identity = 26/28 (92.86%), Postives = 26/28 (92.86%), Query Frame = 0
BLAST of HG10012176 vs. ExPASy TrEMBL
Match: A0A6J1KAA4 (uncharacterized protein LOC111491530 OS=Cucurbita maxima OX=3661 GN=LOC111491530 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 4.1e-04 Identity = 24/28 (85.71%), Postives = 25/28 (89.29%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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