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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGCGGATATTCCGAGAGAGAAGGCAGGCTCACCGTGAGACTAATGTAGACGACGGCTTCTATGTGCCACGTGGATGCCAGCGTGGGTTATTCGACCGGCGTACACGGGTAAAGGAATATTCCCGGAGTCACGTGGCGCGTGGGTTTGTTGCATCGCCGAAAAGGGCATTTCTGAATCGATACGATGTAGTTTCGGGTTAA mRNA sequence ATGCGGATATTCCGAGAGAGAAGGCAGGCTCACCGTGAGACTAATGTAGACGACGGCTTCTATGTGCCACGTGGATGCCAGCGTGGGTTATTCGACCGGCGTACACGGGTAAAGGAATATTCCCGGAGTCACGTGGCGCGTGGGTTTGTTGCATCGCCGAAAAGGGCATTTCTGAATCGATACGATGTAGTTTCGGGTTAA Coding sequence (CDS) ATGCGGATATTCCGAGAGAGAAGGCAGGCTCACCGTGAGACTAATGTAGACGACGGCTTCTATGTGCCACGTGGATGCCAGCGTGGGTTATTCGACCGGCGTACACGGGTAAAGGAATATTCCCGGAGTCACGTGGCGCGTGGGTTTGTTGCATCGCCGAAAAGGGCATTTCTGAATCGATACGATGTAGTTTCGGGTTAA Protein sequence MRIFRERRQAHRETNVDDGFYVPRGCQRGLFDRRTRVKEYSRSHVARGFVASPKRAFLNRYDVVSG
Homology
BLAST of HG10012174 vs. NCBI nr
Match: KAE8650868.1 (hypothetical protein Csa_002560, partial [Cucumis sativus]) HSP 1 Score: 78.2 bits (191), Expect = 3.0e-11 Identity = 38/48 (79.17%), Postives = 39/48 (81.25%), Query Frame = 0 Query: 1 MRIFRERRQAHRETNVDDGFYVPRGCQRGLFDRRTRVKEYSRSHVARG 49 MRI RERRQA R NVDD YVPRGCQRGLF R TR+KEYS SHVARG Sbjct: 18 MRILRERRQAQRLGNVDDSLYVPRGCQRGLFGRLTRMKEYSWSHVARG 65
BLAST of HG10012174 vs. ExPASy TrEMBL
Match: A0A0A0L981 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G638000 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 7.7e-13 Identity = 40/51 (78.43%), Postives = 42/51 (82.35%), Query Frame = 0 Query: 1 MRIFRERRQAHRETNVDDGFYVPRGCQRGLFDRRTRVKEYSRSHVARGFVA 52 MRI RERRQA R NVDD YVPRGCQRGLF R TR+KEYS SHVARG+VA Sbjct: 37 MRILRERRQAQRLGNVDDSLYVPRGCQRGLFGRLTRMKEYSWSHVARGYVA 87
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAE8650868.1 | 3.0e-11 | 79.17 | hypothetical protein Csa_002560, partial [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0L981 | 7.7e-13 | 78.43 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G638000 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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