HG10011924 (gene) Bottle gourd (Hangzhou Gourd) v1

BLAST of HG10011924 vs. NCBI nr
Match: XP_022158566.1 (uncharacterized protein LOC111025019 [Momordica charantia])

HSP 1 Score: 168.7 bits (426), Expect = 5.9e-38
Identity = 86/223 (38.57%), Postives = 119/223 (53.36%), Query Frame = 0

Query: 3   IISPLQYADHIIIFCSGDGLPLDNPWKVTSIFLGCSGLNLNLSKMSLLGINIFYDELNLQ 62
           ++S L+YAD  IIFC      LD  W + S+F+  SGL +NL+K SL+GINI  +E   +
Sbjct: 93  VVSHLRYADDTIIFCPAYKGNLDRWWALISLFIKGSGLRINLAKTSLIGINIGENEATSK 152

Query: 63  AELLECKKDCLPSNYLGFPLGGNHRSIGFWEPIVDKSRRKIAKWKKLLRCSCLSYFLDFE 122
            + + C+ + +   YLG PLGGNHR I FW  +V+K+                       
Sbjct: 153 VDKIGCRVERMSFRYLGLPLGGNHRVIVFWRHLVEKA----------------------- 212

Query: 123 WVALFKPPKGVLKTLTKLIKDFYWEEGDCNLGSHLVNWKIVSLPSVRGGLEIGSLQQSNS 182
                  P  + K + K+++D +W     +   +LV W I SLP   GGL IG+    N+
Sbjct: 213 -------PVSITKEMNKIVRDLFWSGATSHGCKNLVKWDISSLPMKLGGLGIGAFPPKNN 272

Query: 183 ALLTKWCWRFTTEEKALWRKVVASIYKEDRLGRRFFVPKGNSK 226
           ALL KW W FT EE ALWR+V+ASIY  D+ G     PKG +K
Sbjct: 273 ALLMKWLWHFTREENALWRRVIASIYGVDKYGWLTKAPKGKAK 285

BLAST of HG10011924 vs. NCBI nr
Match: RVW55793.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 165.2 bits (417), Expect = 6.5e-37
Identity = 85/214 (39.72%), Postives = 118/214 (55.14%), Query Frame = 0

Query: 4    ISPLQYADHIIIFCSGDGLPLDNPWKVTSIFLGCSGLNLNLSKMSLLGINIFYDELNLQA 63
            +S LQ+AD  I F       L N   +  +F   SGL +NL K ++ GIN   + L+  A
Sbjct: 845  VSLLQFADDTIFFSKASLDLLQNLKIILLVFGQVSGLKINLEKSTISGINTRQEMLSSLA 904

Query: 64   ELLECKKDCLPSNYLGFPLGGNHRSIGFWEPIVDKSRRKIAKWKK---------LLRCSC 123
             +LEC+    P +YLG PLGGN ++IGFW+P+V++  R++  WKK          L  SC
Sbjct: 905  LVLECRVSEWPLSYLGLPLGGNPKTIGFWDPVVERISRRLDGWKKAYLSLGGRITLIQSC 964

Query: 124  LSYFLDFEWVALFKPPKGVLKTLTKLIKDFYWEEGDCNLGSHLVNWKIVSLPSVRGGLEI 183
            LS+   + +++LFK P  +   + K+ +DF W         HL+ W++VS P   GGL  
Sbjct: 965  LSHIPSY-FLSLFKIPVSIASKIEKMQRDFLWSGAGEGKRDHLIRWEVVSRPREMGGLGF 1024

Query: 184  GSLQQSNSALLTKWCWRFTTEEKALWRKVVASIY 209
            G     NSALL KW WRF  E   LW KV+ASIY
Sbjct: 1025 GKTSMRNSALLGKWLWRFPRERSGLWHKVIASIY 1057

BLAST of HG10011924 vs. NCBI nr
Match: RVW16834.1 (putative ribonuclease H protein [Vitis vinifera])

HSP 1 Score: 165.2 bits (417), Expect = 6.5e-37
Identity = 85/214 (39.72%), Postives = 118/214 (55.14%), Query Frame = 0

Query: 4    ISPLQYADHIIIFCSGDGLPLDNPWKVTSIFLGCSGLNLNLSKMSLLGINIFYDELNLQA 63
            +S LQ+AD  I F       L N   +  +F   SGL +NL K ++ GIN   + L+  A
Sbjct: 1202 VSLLQFADDTIFFSKASLDLLQNLKIILLVFGQVSGLKINLEKSTISGINTRQEMLSSLA 1261

Query: 64   ELLECKKDCLPSNYLGFPLGGNHRSIGFWEPIVDKSRRKIAKWKK---------LLRCSC 123
             +LEC+    P +YLG PLGGN ++IGFW+P+V++  R++  WKK          L  SC
Sbjct: 1262 LVLECRVSEWPLSYLGLPLGGNPKTIGFWDPVVERISRRLDGWKKAYLSLGGRITLIQSC 1321

Query: 124  LSYFLDFEWVALFKPPKGVLKTLTKLIKDFYWEEGDCNLGSHLVNWKIVSLPSVRGGLEI 183
            LS+   + +++LFK P  +   + K+ +DF W         HL+ W++VS P   GGL  
Sbjct: 1322 LSHIPSY-FLSLFKIPVSIASKIEKMQRDFLWSGAGEGKRDHLIRWEVVSRPREMGGLGF 1381

Query: 184  GSLQQSNSALLTKWCWRFTTEEKALWRKVVASIY 209
            G     NSALL KW WRF  E   LW KV+ASIY
Sbjct: 1382 GKTSMRNSALLGKWLWRFPRERSGLWHKVIASIY 1414

BLAST of HG10011924 vs. NCBI nr
Match: CAN75609.1 (hypothetical protein VITISV_002943 [Vitis vinifera])

HSP 1 Score: 165.2 bits (417), Expect = 6.5e-37
Identity = 85/214 (39.72%), Postives = 118/214 (55.14%), Query Frame = 0

Query: 4   ISPLQYADHIIIFCSGDGLPLDNPWKVTSIFLGCSGLNLNLSKMSLLGINIFYDELNLQA 63
           +S LQ+AD  I F       L N   +  +F   SGL +NL K ++ GIN   + L+  A
Sbjct: 532 VSLLQFADDTIFFSKASLDLLQNLKIILLVFGQVSGLKINLEKSTISGINTRQEMLSSLA 591

Query: 64  ELLECKKDCLPSNYLGFPLGGNHRSIGFWEPIVDKSRRKIAKWKK---------LLRCSC 123
            +LEC+    P +YLG PLGGN ++IGFW+P+V++  R++  WKK          L  SC
Sbjct: 592 LVLECRVSEWPLSYLGLPLGGNPKTIGFWDPVVERISRRLDGWKKAYLSLGGRITLIQSC 651

Query: 124 LSYFLDFEWVALFKPPKGVLKTLTKLIKDFYWEEGDCNLGSHLVNWKIVSLPSVRGGLEI 183
           LS+   + +++LFK P  +   + K+ +DF W         HL+ W++VS P   GGL  
Sbjct: 652 LSHIPSY-FLSLFKIPVSIASKIEKMQRDFLWSGAGEGKRDHLIRWEVVSRPREMGGLGF 711

Query: 184 GSLQQSNSALLTKWCWRFTTEEKALWRKVVASIY 209
           G     NSALL KW WRF  E   LW KV+ASIY
Sbjct: 712 GKTSMRNSALLGKWLWRFPRERSGLWHKVIASIY 744

BLAST of HG10011924 vs. NCBI nr
Match: RVW19920.1 (Biotin synthase, mitochondrial [Vitis vinifera])

HSP 1 Score: 165.2 bits (417), Expect = 6.5e-37
Identity = 85/214 (39.72%), Postives = 118/214 (55.14%), Query Frame = 0

Query: 4    ISPLQYADHIIIFCSGDGLPLDNPWKVTSIFLGCSGLNLNLSKMSLLGINIFYDELNLQA 63
            +S LQ+AD  I F       L N   +  +F   SGL +NL K ++ GIN   + L+  A
Sbjct: 1327 VSLLQFADDTIFFSKASLDLLQNLKIILLVFGQVSGLKINLEKSTISGINTRQEMLSSLA 1386

Query: 64   ELLECKKDCLPSNYLGFPLGGNHRSIGFWEPIVDKSRRKIAKWKK---------LLRCSC 123
             +LEC+    P +YLG PLGGN ++IGFW+P+V++  R++  WKK          L  SC
Sbjct: 1387 LVLECRVSEWPLSYLGLPLGGNPKTIGFWDPVVERISRRLDGWKKAYLSLGGRITLIQSC 1446

Query: 124  LSYFLDFEWVALFKPPKGVLKTLTKLIKDFYWEEGDCNLGSHLVNWKIVSLPSVRGGLEI 183
            LS+   + +++LFK P  +   + K+ +DF W         HL+ W++VS P   GGL  
Sbjct: 1447 LSHIPSY-FLSLFKIPVSIASKIEKMQRDFLWSGAGEGKRDHLIRWEVVSRPREMGGLGF 1506

Query: 184  GSLQQSNSALLTKWCWRFTTEEKALWRKVVASIY 209
            G     NSALL KW WRF  E   LW KV+ASIY
Sbjct: 1507 GKTSMRNSALLGKWLWRFPRERSGLWHKVIASIY 1539

BLAST of HG10011924 vs. ExPASy TrEMBL
Match: A0A6J1E196 (uncharacterized protein LOC111025019 OS=Momordica charantia OX=3673 GN=LOC111025019 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 2.8e-38
Identity = 86/223 (38.57%), Postives = 119/223 (53.36%), Query Frame = 0

Query: 3   IISPLQYADHIIIFCSGDGLPLDNPWKVTSIFLGCSGLNLNLSKMSLLGINIFYDELNLQ 62
           ++S L+YAD  IIFC      LD  W + S+F+  SGL +NL+K SL+GINI  +E   +
Sbjct: 93  VVSHLRYADDTIIFCPAYKGNLDRWWALISLFIKGSGLRINLAKTSLIGINIGENEATSK 152

Query: 63  AELLECKKDCLPSNYLGFPLGGNHRSIGFWEPIVDKSRRKIAKWKKLLRCSCLSYFLDFE 122
            + + C+ + +   YLG PLGGNHR I FW  +V+K+                       
Sbjct: 153 VDKIGCRVERMSFRYLGLPLGGNHRVIVFWRHLVEKA----------------------- 212

Query: 123 WVALFKPPKGVLKTLTKLIKDFYWEEGDCNLGSHLVNWKIVSLPSVRGGLEIGSLQQSNS 182
                  P  + K + K+++D +W     +   +LV W I SLP   GGL IG+    N+
Sbjct: 213 -------PVSITKEMNKIVRDLFWSGATSHGCKNLVKWDISSLPMKLGGLGIGAFPPKNN 272

Query: 183 ALLTKWCWRFTTEEKALWRKVVASIYKEDRLGRRFFVPKGNSK 226
           ALL KW W FT EE ALWR+V+ASIY  D+ G     PKG +K
Sbjct: 273 ALLMKWLWHFTREENALWRRVIASIYGVDKYGWLTKAPKGKAK 285

BLAST of HG10011924 vs. ExPASy TrEMBL
Match: A0A803QI00 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 6.3e-38
Identity = 84/213 (39.44%), Postives = 119/213 (55.87%), Query Frame = 0

Query: 4    ISPLQYADHIIIFCSGDGLPLDNPWKVTSIFLGCSGLNLNLSKMSLLGINIFYDELNLQA 63
            IS LQ+AD  + F   D   L    ++   F G SGL +NL+K  LLGI++  + +   A
Sbjct: 1580 ISHLQFADDTLFFVK-DEASLRKLVEIVEAFCGISGLKVNLNKSQLLGISLEEEVVAQNA 1639

Query: 64   ELLECKKDCLPSNYLGFPLGGNHRSIGFWEPIVDKSRRKIAKWK--------KLLRCSCL 123
            E++ C+    P  YLG PLGG+ R   FWEP++DK  +++  WK        +L+    +
Sbjct: 1640 EIIGCEVGTWPMTYLGMPLGGSPRKGTFWEPVLDKCAKRLDGWKCSFLSRGGRLILIQSV 1699

Query: 124  SYFLDFEWVALFKPPKGVLKTLTKLIKDFYWEEGDCNLGSHLVNWKIVSLPSVRGGLEIG 183
               L   +++LFK PK VL+ + K+++DF+WE GD   G HLV W  V  P   GGL IG
Sbjct: 1700 LSSLPIYYLSLFKAPKMVLQAIEKMMRDFFWEGGDLAGGDHLVAWDEVCKPRSEGGLAIG 1759

Query: 184  SLQQSNSALLTKWCWRFTTEEKALWRKVVASIY 209
             L+  N  LL KW WR+  E  +LW KV+ S Y
Sbjct: 1760 RLEMRNKGLLMKWLWRYPLEPNSLWHKVIKSRY 1791

BLAST of HG10011924 vs. ExPASy TrEMBL
Match: A0A803P8A0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.1e-37
Identity = 87/213 (40.85%), Postives = 116/213 (54.46%), Query Frame = 0

Query: 4   ISPLQYADHIIIFCSGDGLPLDNPWKVTSIFLGCSGLNLNLSKMSLLGINIFYDELNLQA 63
           +S LQ+AD  + F   D   L    K+   F G SGL +NL+K  LLGI +  + +   A
Sbjct: 681 LSHLQFADDTLFFVK-DEDSLQKLVKIVEAFCGISGLKVNLNKSQLLGICLSDEAVAQGA 740

Query: 64  ELLECKKDCLPSNYLGFPLGGNHRSIGFWEPIVDKSRRKIAKWK--------KLLRCSCL 123
            L+ C+    P  YLG PLGG+ R   FWEP++DK  +++  WK        +L     +
Sbjct: 741 NLIGCEVGKWPMTYLGMPLGGSPRKKTFWEPVLDKCAKRMDGWKCSFLSRGGRLTLIQSV 800

Query: 124 SYFLDFEWVALFKPPKGVLKTLTKLIKDFYWEEGDCNLGSHLVNWKIVSLPSVRGGLEIG 183
              L   +++LFK PK VLK L K+++DF+WE GD   G HLV W  V  P   GGL IG
Sbjct: 801 LSSLPIYYLSLFKVPKMVLKELEKMMRDFFWEGGDLAGGDHLVAWDEVCKPRAEGGLAIG 860

Query: 184 SLQQSNSALLTKWCWRFTTEEKALWRKVVASIY 209
            L+  N  LL KW WRF  E  +LW KV+ S Y
Sbjct: 861 RLEMRNKGLLMKWLWRFPLESNSLWHKVIKSRY 892

BLAST of HG10011924 vs. ExPASy TrEMBL
Match: A0A803QQM3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 2.4e-37
Identity = 86/213 (40.38%), Postives = 114/213 (53.52%), Query Frame = 0

Query: 4    ISPLQYADHIIIFCSGDGLPLDNPWKVTSIFLGCSGLNLNLSKMSLLGINIFYDELNLQA 63
            +S LQ+AD  + F   D   L    K+   F G SGL +NL+K  LLG+ +  D +   A
Sbjct: 1604 LSHLQFADDTLFFVK-DEASLQKLVKIVEAFCGISGLKVNLNKSQLLGVCMDEDAVAQSA 1663

Query: 64   ELLECKKDCLPSNYLGFPLGGNHRSIGFWEPIVDKSRRKIAKWK--------KLLRCSCL 123
              + C+    P  YLG PLGG+ R   FWEP++DK   ++  WK        +L     +
Sbjct: 1664 IQIGCEVGRWPMTYLGMPLGGSPRKRSFWEPVLDKCATRMDGWKCSFLSRGGRLTLIQSV 1723

Query: 124  SYFLDFEWVALFKPPKGVLKTLTKLIKDFYWEEGDCNLGSHLVNWKIVSLPSVRGGLEIG 183
               L   +++LFK PK VLK L K+++DF+WE GD   G HLV W  V  P   GGL IG
Sbjct: 1724 LSSLPIYFLSLFKAPKVVLKELEKMMRDFFWEGGDLAGGDHLVAWDEVCKPRAEGGLAIG 1783

Query: 184  SLQQSNSALLTKWCWRFTTEEKALWRKVVASIY 209
             L+  N  LL KW WRF  E  +LW KV+ S Y
Sbjct: 1784 RLEMRNKGLLMKWLWRFPLESNSLWHKVIKSRY 1815

BLAST of HG10011924 vs. ExPASy TrEMBL
Match: F4NCK1 (Reverse transcriptase domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 4.1e-37
Identity = 88/214 (41.12%), Postives = 117/214 (54.67%), Query Frame = 0

Query: 4   ISPLQYADHIIIFCSGDGLPLDNPWKVTSIFLGCSGLNLNLSKMSLLGINIFYDELNLQA 63
           I+ LQYAD  IIFC      L N  K   +F   SGL +N  K SLLG+N+  + LN  A
Sbjct: 673 ITHLQYADDTIIFCPPKLEFLSNIKKTLILFQLASGLQVNFHKSSLLGVNVHENLLNDFA 732

Query: 64  ELLECKKDCLPSNYLGFPLGGNHRSIGFWEPIVDKSRRKIAKWKKLLRC---------SC 123
           + L CK   LP  YLG P+GGN   +  W+P++ K  +K+A WK  L           +C
Sbjct: 733 KHLLCKVGKLPFTYLGLPIGGNITRLSLWDPVISKLEKKLASWKSNLLSIGGRLTLIKAC 792

Query: 124 LSYFLDFEWVALFKPPKGVLKTLTKLIKDFYWEEGDCNLGSHLVNWKIVSLPSVRGGLEI 183
           LS  L   +++LF  PKGVL  +  + + F W       G  LV+W +++LP   GGL +
Sbjct: 793 LSN-LPLYYMSLFPIPKGVLGKIVAIQRRFLWSGNSSKKGMPLVSWDLIALPKHLGGLGL 852

Query: 184 GSLQQSNSALLTKWCWRFTTEEKALWRKVVASIY 209
           G+L   N+ALL KW WRF  E  ALWR+VV   Y
Sbjct: 853 GNLHHKNTALLFKWIWRFLNEPHALWRQVVHGKY 885

BLAST of HG10011924 vs. TAIR 10
Match: AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 70.1 bits (170), Expect = 2.6e-12
Identity = 40/144 (27.78%), Postives = 62/144 (43.06%), Query Frame = 0

Query: 73  LPSNYLGFPLGGNHRSIGFWEPIVDKSRRKIAKWK--------KLLRCSCLSYFLDFEWV 132
           LP  YLG PL     +   + P+V+K R +I KW         +L   S + + L   W+
Sbjct: 23  LPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISSVIHSLTNFWM 82

Query: 133 ALFKPPKGVLKTLTKLIKDFYWEEGDCNLGSHLVNWKIVSLPSVRGGLEIGSLQQSN--- 192
           + F+ P   +K +  +   F W   + N     V W  V  P   GGL I SL+++N   
Sbjct: 83  SAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGIRSLKEANKGS 142

Query: 193 ------SALLTKWCWRFTTEEKAL 200
                 +  L  W W+   + +AL
Sbjct: 143 FWSISGNTTLGSWMWKKILKHRAL 166

BLAST of HG10011924 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 53.1 bits (126), Expect = 3.3e-07
Identity = 27/85 (31.76%), Postives = 39/85 (45.88%), Query Frame = 0

Query: 124 VALFKPPKGVLKTLTKLIKDFYWEEGDCNLGSHLVNWKIVSLPSVRGGLEIGSLQQSNSA 183
           +A F  PK V K +  ++ DF+W       G H   W  +S     GG+    ++  N A
Sbjct: 8   MACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDIEAFNLA 67

Query: 184 LLTKWCWRFTTEEKALWRKVVASIY 209
           LL K  WR  +  ++L  KV  S Y
Sbjct: 68  LLGKQMWRMLSRPESLMAKVFKSRY 92