Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGGCTTCAAATATTTCCTTCTCTGGCCCTTTGTTTTCATCTGCTTAAGCTACACCTTCGCCAATGTAGTCTTCAACTCCAATGATGGATCTGGTTCCGATCTTAGGGCTTGGCCAATACCCGACCCCAGTGCTGGCCCTGGAGTCGATAGAGGGGTAAGTAATGTCGGGGCTGGTCCAAGAGCCGAGCCGAGAGCTTACCTAAGAGACGAGGGAGGGGTAAGTAATGTTGGTGCTAGTCCGAGAGCCGGACCAAAAGCTGGCCTAGAAGGTGAGGGAGGGTTAAGCAATGTCATTACTGGTTCGAGATCCGGACCGAAAGCTAGCCCAGGAATCGAAGGAGGGGTAAGCAATGTTGGTGCTGGTCTGAGATATGGATTGAAAGCTGGTCCAGGAGTCGAGGAAGGGGTAAGCAATGTCGGTGCTGGTCTGAGAGCTGGACCGAAAGCTGGCCCAGGACCTAAGGTAGGGGTAAGTGGTAGTGGGGCTGGTCCGAGAGTCGGGCCAAAAGGTGTTAATTCAATTGTTAATGGAGTCGAAGTTGGAGTCGGAGTTGGGTACAGGCCAGGATTTGGTCCTCCAGGATTTGTGCCTCCAGGATTTGGTCCAAGGCCAGGGTATTGGCCTGTTAAACCGTACGATGAATGCACATTGGGCTATGTTTGTCCATCAAATGAATGCAGCAAATTTGAGTATGGACCTTGCGAATCTTATCACTTTCGTCCATTAACGGCTTCTACGGACCTGCACGAAGTTGGCATCAATTGGGCCAATAGCAAGCCTGTTGCAACGACCCAACATGGCGGATCTGGACCAGTTAATCACATCGACTCAGCCCACTAA
mRNA sequence
ATGGCTGGCTTCAAATATTTCCTTCTCTGGCCCTTTGTTTTCATCTGCTTAAGCTACACCTTCGCCAATGTAGTCTTCAACTCCAATGATGGATCTGGTTCCGATCTTAGGGCTTGGCCAATACCCGACCCCAGTGCTGGCCCTGGAGTCGATAGAGGGGTAAGTAATGTCGGGGCTGGTCCAAGAGCCGAGCCGAGAGCTTACCTAAGAGACGAGGGAGGGGTAAGTAATGTTGGTGCTAGTCCGAGAGCCGGACCAAAAGCTGGCCTAGAAGGTGAGGGAGGGTTAAGCAATGTCATTACTGGTTCGAGATCCGGACCGAAAGCTAGCCCAGGAATCGAAGGAGGGGTAAGCAATGTTGGTGCTGGTCTGAGATATGGATTGAAAGCTGGTCCAGGAGTCGAGGAAGGGGTAAGCAATGTCGGTGCTGGTCTGAGAGCTGGACCGAAAGCTGGCCCAGGACCTAAGGTAGGGGTAAGTGGTAGTGGGGCTGGTCCGAGAGTCGGGCCAAAAGGTGTTAATTCAATTGTTAATGGAGTCGAAGTTGGAGTCGGAGTTGGGTACAGGCCAGGATTTGGTCCTCCAGGATTTGTGCCTCCAGGATTTGGTCCAAGGCCAGGGTATTGGCCTGTTAAACCGTACGATGAATGCACATTGGGCTATGTTTGTCCATCAAATGAATGCAGCAAATTTGAGTATGGACCTTGCGAATCTTATCACTTTCGTCCATTAACGGCTTCTACGGACCTGCACGAAGTTGGCATCAATTGGGCCAATAGCAAGCCTGTTGCAACGACCCAACATGGCGGATCTGGACCAGTTAATCACATCGACTCAGCCCACTAA
Coding sequence (CDS)
ATGGCTGGCTTCAAATATTTCCTTCTCTGGCCCTTTGTTTTCATCTGCTTAAGCTACACCTTCGCCAATGTAGTCTTCAACTCCAATGATGGATCTGGTTCCGATCTTAGGGCTTGGCCAATACCCGACCCCAGTGCTGGCCCTGGAGTCGATAGAGGGGTAAGTAATGTCGGGGCTGGTCCAAGAGCCGAGCCGAGAGCTTACCTAAGAGACGAGGGAGGGGTAAGTAATGTTGGTGCTAGTCCGAGAGCCGGACCAAAAGCTGGCCTAGAAGGTGAGGGAGGGTTAAGCAATGTCATTACTGGTTCGAGATCCGGACCGAAAGCTAGCCCAGGAATCGAAGGAGGGGTAAGCAATGTTGGTGCTGGTCTGAGATATGGATTGAAAGCTGGTCCAGGAGTCGAGGAAGGGGTAAGCAATGTCGGTGCTGGTCTGAGAGCTGGACCGAAAGCTGGCCCAGGACCTAAGGTAGGGGTAAGTGGTAGTGGGGCTGGTCCGAGAGTCGGGCCAAAAGGTGTTAATTCAATTGTTAATGGAGTCGAAGTTGGAGTCGGAGTTGGGTACAGGCCAGGATTTGGTCCTCCAGGATTTGTGCCTCCAGGATTTGGTCCAAGGCCAGGGTATTGGCCTGTTAAACCGTACGATGAATGCACATTGGGCTATGTTTGTCCATCAAATGAATGCAGCAAATTTGAGTATGGACCTTGCGAATCTTATCACTTTCGTCCATTAACGGCTTCTACGGACCTGCACGAAGTTGGCATCAATTGGGCCAATAGCAAGCCTGTTGCAACGACCCAACATGGCGGATCTGGACCAGTTAATCACATCGACTCAGCCCACTAA
Protein sequence
MAGFKYFLLWPFVFICLSYTFANVVFNSNDGSGSDLRAWPIPDPSAGPGVDRGVSNVGAGPRAEPRAYLRDEGGVSNVGASPRAGPKAGLEGEGGLSNVITGSRSGPKASPGIEGGVSNVGAGLRYGLKAGPGVEEGVSNVGAGLRAGPKAGPGPKVGVSGSGAGPRVGPKGVNSIVNGVEVGVGVGYRPGFGPPGFVPPGFGPRPGYWPVKPYDECTLGYVCPSNECSKFEYGPCESYHFRPLTASTDLHEVGINWANSKPVATTQHGGSGPVNHIDSAH
Homology
BLAST of HG10011672 vs. NCBI nr
Match:
KGN56231.1 (hypothetical protein Csa_011503 [Cucumis sativus])
HSP 1 Score: 236.5 bits (602), Expect = 2.8e-58
Identity = 152/290 (52.41%), Postives = 172/290 (59.31%), Query Frame = 0
Query: 1 MAGFKYFLLWPFVFICLSYTFANVVFNSNDGSGSDLRAWPIPDPSAGPGVDRGVSNVGAG 60
MA KYFLL PF+F+CLSYTFAN VFN +DG G + P PDPSAGP VDRGVSN G G
Sbjct: 1 MASLKYFLLSPFLFLCLSYTFANGVFNYDDGLGFGSMSSPTPDPSAGP-VDRGVSNFGIG 60
Query: 61 PRAEPRAYLRDEGGVSNVGASPRAGPKAGLEGEGGLSNVITGSRSGPKASPGIEGGVSNV 120
P+AGP+AGL G GG+SNV GS GP
Sbjct: 61 ---------------------PKAGPRAGL-GVGGISNVDDGSDPGP------------- 120
Query: 121 GAGLRYGLKAGPGVEEGVSNVGAGLRAGPKAGPGPKVGVSGSGAGPRVGPKGVNSIVNGV 180
KAGPGV+E +SNVGAG R PK+GVS AGPR GPKGV+ IV G+
Sbjct: 121 --------KAGPGVKEEMSNVGAGPRV-------PKLGVSSIEAGPRAGPKGVDPIVTGL 180
Query: 181 EVGVGVGYRPGFGPPGFVPPGFGPRPGYW----PV--KPYDECTLGYVCPSNE---CSKF 240
VGVGV P FG P G P PG W P+ +PY+ C LGYVCP+N C K
Sbjct: 181 GVGVGVNLPPIFGGPKM---GIRPGPGGWYGPGPIIQEPYNNCMLGYVCPTNRPWACGKV 236
Query: 241 EYGPCESYHFRPLTASTDLHEVGINWANSKPVATTQHGGSGPVNHIDSAH 282
YG CESY+FRPL+AST+LH+V INWA SK V T QHG SGP HIDSAH
Sbjct: 241 GYGLCESYNFRPLSASTELHDVKINWAKSKSVETAQHGESGPGIHIDSAH 236
BLAST of HG10011672 vs. NCBI nr
Match:
KAG6577377.1 (hypothetical protein SDJN03_24951, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 223.8 bits (569), Expect = 1.9e-54
Identity = 152/293 (51.88%), Postives = 180/293 (61.43%), Query Frame = 0
Query: 1 MAGFKYFLLWPFVFICLSYTFANVVFNSNDGSGSDLRAWPIPDPSAGPGVDRGVSNVGAG 60
M KYFLL PFVF+CLS TFAN V NS+DGSG D+ A P P+AGPGV++GVSNV AG
Sbjct: 1 MGSLKYFLLSPFVFLCLSCTFANRVPNSDDGSGFDVGAGPGAIPTAGPGVEKGVSNVRAG 60
Query: 61 PRAE-------------PRAYLRDEGGVSNV----GASPRAGPKAGLEGEGGLSNVITGS 120
P AE P+A EG VS+V A P+AGPKAG E +S+V G
Sbjct: 61 PAAEGWVNDVRAGLKAGPKAGPGAEGWVSDVKAGLRAGPKAGPKAGPGAEEWVSDVKAGP 120
Query: 121 RSGPKASPGIEGGVSNVGAGLRYGLKAGPGVEEGVSNVGAGLRAGPKAGPGPKVGVSGSG 180
R+GPKA PG EG VS+V AGLR G KAGPG E VSNV AG GP+A PG + GVS S
Sbjct: 121 RAGPKAGPGAEGWVSDVKAGLRAGPKAGPGAEGWVSNVKAGPTVGPRAWPGTEGGVSSSE 180
Query: 181 AGPRVGPKGVNSIVNGVEVGVGV--GYRPGF-GPPGFVPPGFGPRPGYWPVKPYDECTLG 240
G R + V+ ++NG+ +G+GV GYR GF G FGP G +ECTLG
Sbjct: 181 GGVR---RDVDPMINGLGLGLGVDIGYRSGFRAGLGGGEHWFGPGIGIGGGGVSNECTLG 240
Query: 241 YVCPS---NECSKFEYGPCESYHFRPLTASTDLHEVGINWA-NSKPVATTQHG 270
YVCP+ C KF YG C++Y F PL AS LHEV + WA SKP AT Q+G
Sbjct: 241 YVCPTYGRRGCDKFSYGNCDTYGFHPLMASMHLHEVEMKWAKGSKPAATPQNG 290
BLAST of HG10011672 vs. NCBI nr
Match:
KAA0060661.1 (hypothetical protein E6C27_scaffold22G005540 [Cucumis melo var. makuwa] >TYK02214.1 hypothetical protein E5676_scaffold18G00010 [Cucumis melo var. makuwa])
HSP 1 Score: 211.8 bits (538), Expect = 7.4e-51
Identity = 139/286 (48.60%), Postives = 155/286 (54.20%), Query Frame = 0
Query: 1 MAGFKYFLLWPFVFICLSYTFANVVFNSNDGSGSDLRAWPIPDPSAGPGVDRGVSNVGAG 60
MA KYFLL PF+F+CLSYTFA+ VFN + G + P PDPSAGPGVD GVSN+G G
Sbjct: 1 MASLKYFLLSPFLFLCLSYTFADGVFNYDHGLDFGSMSSPTPDPSAGPGVDIGVSNIGIG 60
Query: 61 PRAEPRAYLRDEGGVSNVGASPRAGPKAGLEGEGGLSNVITGSRSGPKASPGIEGGVSNV 120
P+A PRA L GG+S+V P GPK
Sbjct: 61 PKAGPRAGLGIGGGISDVDDEP-----------------------GPK------------ 120
Query: 121 GAGLRYGLKAGPGVEEGVSNVGAGLRAGPKAGPGPKVGVSGSGAGPRVGPKGVNSIVNGV 180
AGPKA G K+GVSG AGPR GPKG VNG
Sbjct: 121 --------------------------AGPKASGGHKLGVSGIEAGPRAGPKG----VNGF 180
Query: 181 EVGVGVGYRPGFGPP--GFVP-PGFGPRPGYWPVKPYDECTLGYVCPSN--ECSKFEYGP 240
VGVGV P FG P G P PG RPG +PY C LGYVCP+ CSKF YG
Sbjct: 181 GVGVGVDLPPVFGGPKIGLKPGPGGWYRPGPIIQEPYGNCMLGYVCPNRPWACSKFAYGL 221
Query: 241 CESYHFRPLTASTDLHEVGINWANSKPVATTQHGGSGPVNHIDSAH 282
C+SY+F PL+ASTDLHEV INWA SKP AT QHG SGP H+DSAH
Sbjct: 241 CDSYNFHPLSASTDLHEVKINWAKSKPDATAQHGESGPATHVDSAH 221
BLAST of HG10011672 vs. NCBI nr
Match:
XP_022929340.1 (fibroin heavy chain-like [Cucurbita moschata])
HSP 1 Score: 199.9 bits (507), Expect = 2.9e-47
Identity = 135/276 (48.91%), Postives = 162/276 (58.70%), Query Frame = 0
Query: 1 MAGFKYFLLWPFVFICLSYTFANVVFNSNDGSGSDLRAWPIPDPSAGPGVDRGVSNVGAG 60
M KYFLL PFVF+CLS TFAN V NS+DGSG D+ A P P+AGPGV++GVSNV AG
Sbjct: 1 MGSLKYFLLSPFVFLCLSCTFANRVPNSDDGSGFDVGAGPGAIPTAGPGVEKGVSNVRAG 60
Query: 61 PRAEPRAYLRDEGGVSNVGASPRAGPKAGLEGEGGLSNVITGSRSGPKASPGIEGGVSNV 120
P A EG +++V G ++GPKA PG EG VS+V
Sbjct: 61 PAA-----------------------------EGWVNDVWAGLKAGPKAGPGAEGWVSDV 120
Query: 121 GAGLRYGLKAGPGVEEGVSNVGAGLRAGPKAGPGPKVGVSGSGAGPRVGPKGVNSIVNGV 180
AGLR G KAGPG E VSNV AG GP+A PG + GVS S G R + V+ ++NG+
Sbjct: 121 KAGLRAGPKAGPGAEGWVSNVKAGPTVGPRAWPGTEGGVSSSEGGVR---RDVDPMINGL 180
Query: 181 EVGVGV--GYRPGF-GPPGFVPPGFGPRPGYWPVKPYDECTLGYVCPS---NECSKFEYG 240
+G+GV GYR GF G FGP G +ECTLGYVCP+ C KF YG
Sbjct: 181 GLGLGVDIGYRSGFRAGLGGGEHWFGPGIGIGGGGVSNECTLGYVCPTYGRRGCDKFSYG 240
Query: 241 PCESYHFRPLTASTDLHEVGINWA-NSKPVATTQHG 270
C++Y F PL AS LHEV + WA SKP AT Q+G
Sbjct: 241 NCDTYGFHPLMASMHLHEVEMKWAKGSKPAATPQNG 244
BLAST of HG10011672 vs. NCBI nr
Match:
XP_023551823.1 (fibroin heavy chain-like isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 183.3 bits (464), Expect = 2.8e-42
Identity = 126/255 (49.41%), Postives = 151/255 (59.22%), Query Frame = 0
Query: 39 WPIPDPSAGPGVDRGVSNVGAGPRAE-------------PRAYLRDEGGVSNVGASPRAG 98
WP P+AGPGV++GVSNV AGP AE P+A EG VS+V A PRAG
Sbjct: 8 WPGAVPTAGPGVEKGVSNVRAGPAAEGWVNDVWAGTKAGPKAGPGAEGWVSDVKAGPRAG 67
Query: 99 PKAGLEGEGGLSNVITGSRSGPKASPGIEGGVSNVGAGLRYGLKAGPGVEEGVSNVGAGL 158
KAG E +S+V G R+GPKA PG EG VS+V AG R G KAGPG E V+NV AG
Sbjct: 68 LKAGPGAEEWVSDVKAGPRAGPKAGPGAEGWVSDVKAGPRAGPKAGPGAEGWVNNVKAGP 127
Query: 159 RAGPKAGPGPKVGVSGSGAGPRVGPKGVNSIVNGVEVGVGV--GYRPGF-----GPPGFV 218
GP+A PG + GVS S G R + V+ ++NG+ +G+GV GYR GF G +
Sbjct: 128 TVGPRAWPGTEGGVSSSEGGVR---RDVDPMINGLGLGLGVDIGYRSGFRAGVGGGEHWF 187
Query: 219 PPGFGPRPGYWPVKPYDECTLGYVCPS---NECSKFEYGPCESYHFRPLTASTDLHEVGI 270
PG G R +ECTLGYVCP+ C KF YG C+SY F PL AS LHEV +
Sbjct: 188 GPGIGGR------GVSNECTLGYVCPTYGRRGCDKFSYGNCDSYGFHPLMASMQLHEVEM 247
BLAST of HG10011672 vs. ExPASy TrEMBL
Match:
A0A0A0L7X7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104850 PE=4 SV=1)
HSP 1 Score: 236.5 bits (602), Expect = 1.4e-58
Identity = 152/290 (52.41%), Postives = 172/290 (59.31%), Query Frame = 0
Query: 1 MAGFKYFLLWPFVFICLSYTFANVVFNSNDGSGSDLRAWPIPDPSAGPGVDRGVSNVGAG 60
MA KYFLL PF+F+CLSYTFAN VFN +DG G + P PDPSAGP VDRGVSN G G
Sbjct: 1 MASLKYFLLSPFLFLCLSYTFANGVFNYDDGLGFGSMSSPTPDPSAGP-VDRGVSNFGIG 60
Query: 61 PRAEPRAYLRDEGGVSNVGASPRAGPKAGLEGEGGLSNVITGSRSGPKASPGIEGGVSNV 120
P+AGP+AGL G GG+SNV GS GP
Sbjct: 61 ---------------------PKAGPRAGL-GVGGISNVDDGSDPGP------------- 120
Query: 121 GAGLRYGLKAGPGVEEGVSNVGAGLRAGPKAGPGPKVGVSGSGAGPRVGPKGVNSIVNGV 180
KAGPGV+E +SNVGAG R PK+GVS AGPR GPKGV+ IV G+
Sbjct: 121 --------KAGPGVKEEMSNVGAGPRV-------PKLGVSSIEAGPRAGPKGVDPIVTGL 180
Query: 181 EVGVGVGYRPGFGPPGFVPPGFGPRPGYW----PV--KPYDECTLGYVCPSNE---CSKF 240
VGVGV P FG P G P PG W P+ +PY+ C LGYVCP+N C K
Sbjct: 181 GVGVGVNLPPIFGGPKM---GIRPGPGGWYGPGPIIQEPYNNCMLGYVCPTNRPWACGKV 236
Query: 241 EYGPCESYHFRPLTASTDLHEVGINWANSKPVATTQHGGSGPVNHIDSAH 282
YG CESY+FRPL+AST+LH+V INWA SK V T QHG SGP HIDSAH
Sbjct: 241 GYGLCESYNFRPLSASTELHDVKINWAKSKSVETAQHGESGPGIHIDSAH 236
BLAST of HG10011672 vs. ExPASy TrEMBL
Match:
A0A5A7V4J6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00010 PE=4 SV=1)
HSP 1 Score: 211.8 bits (538), Expect = 3.6e-51
Identity = 139/286 (48.60%), Postives = 155/286 (54.20%), Query Frame = 0
Query: 1 MAGFKYFLLWPFVFICLSYTFANVVFNSNDGSGSDLRAWPIPDPSAGPGVDRGVSNVGAG 60
MA KYFLL PF+F+CLSYTFA+ VFN + G + P PDPSAGPGVD GVSN+G G
Sbjct: 1 MASLKYFLLSPFLFLCLSYTFADGVFNYDHGLDFGSMSSPTPDPSAGPGVDIGVSNIGIG 60
Query: 61 PRAEPRAYLRDEGGVSNVGASPRAGPKAGLEGEGGLSNVITGSRSGPKASPGIEGGVSNV 120
P+A PRA L GG+S+V P GPK
Sbjct: 61 PKAGPRAGLGIGGGISDVDDEP-----------------------GPK------------ 120
Query: 121 GAGLRYGLKAGPGVEEGVSNVGAGLRAGPKAGPGPKVGVSGSGAGPRVGPKGVNSIVNGV 180
AGPKA G K+GVSG AGPR GPKG VNG
Sbjct: 121 --------------------------AGPKASGGHKLGVSGIEAGPRAGPKG----VNGF 180
Query: 181 EVGVGVGYRPGFGPP--GFVP-PGFGPRPGYWPVKPYDECTLGYVCPSN--ECSKFEYGP 240
VGVGV P FG P G P PG RPG +PY C LGYVCP+ CSKF YG
Sbjct: 181 GVGVGVDLPPVFGGPKIGLKPGPGGWYRPGPIIQEPYGNCMLGYVCPNRPWACSKFAYGL 221
Query: 241 CESYHFRPLTASTDLHEVGINWANSKPVATTQHGGSGPVNHIDSAH 282
C+SY+F PL+ASTDLHEV INWA SKP AT QHG SGP H+DSAH
Sbjct: 241 CDSYNFHPLSASTDLHEVKINWAKSKPDATAQHGESGPATHVDSAH 221
BLAST of HG10011672 vs. ExPASy TrEMBL
Match:
A0A6J1EU53 (fibroin heavy chain-like OS=Cucurbita moschata OX=3662 GN=LOC111435943 PE=4 SV=1)
HSP 1 Score: 199.9 bits (507), Expect = 1.4e-47
Identity = 135/276 (48.91%), Postives = 162/276 (58.70%), Query Frame = 0
Query: 1 MAGFKYFLLWPFVFICLSYTFANVVFNSNDGSGSDLRAWPIPDPSAGPGVDRGVSNVGAG 60
M KYFLL PFVF+CLS TFAN V NS+DGSG D+ A P P+AGPGV++GVSNV AG
Sbjct: 1 MGSLKYFLLSPFVFLCLSCTFANRVPNSDDGSGFDVGAGPGAIPTAGPGVEKGVSNVRAG 60
Query: 61 PRAEPRAYLRDEGGVSNVGASPRAGPKAGLEGEGGLSNVITGSRSGPKASPGIEGGVSNV 120
P A EG +++V G ++GPKA PG EG VS+V
Sbjct: 61 PAA-----------------------------EGWVNDVWAGLKAGPKAGPGAEGWVSDV 120
Query: 121 GAGLRYGLKAGPGVEEGVSNVGAGLRAGPKAGPGPKVGVSGSGAGPRVGPKGVNSIVNGV 180
AGLR G KAGPG E VSNV AG GP+A PG + GVS S G R + V+ ++NG+
Sbjct: 121 KAGLRAGPKAGPGAEGWVSNVKAGPTVGPRAWPGTEGGVSSSEGGVR---RDVDPMINGL 180
Query: 181 EVGVGV--GYRPGF-GPPGFVPPGFGPRPGYWPVKPYDECTLGYVCPS---NECSKFEYG 240
+G+GV GYR GF G FGP G +ECTLGYVCP+ C KF YG
Sbjct: 181 GLGLGVDIGYRSGFRAGLGGGEHWFGPGIGIGGGGVSNECTLGYVCPTYGRRGCDKFSYG 240
Query: 241 PCESYHFRPLTASTDLHEVGINWA-NSKPVATTQHG 270
C++Y F PL AS LHEV + WA SKP AT Q+G
Sbjct: 241 NCDTYGFHPLMASMHLHEVEMKWAKGSKPAATPQNG 244
BLAST of HG10011672 vs. ExPASy TrEMBL
Match:
A0A7R9G286 (Hypothetical protein OS=Timema shepardi OX=629360 GN=TSIB3V08_LOCUS8372 PE=4 SV=1)
HSP 1 Score: 71.2 bits (173), Expect = 7.5e-09
Identity = 72/183 (39.34%), Postives = 78/183 (42.62%), Query Frame = 0
Query: 44 PSAGPGVDRGVS---NVGAGPRAEPRAYLRDEGGVSNVGASP-------RAGPKAGLEGE 103
P GPGV G VG GP P G S VG P GP G G
Sbjct: 569 PGYGPGVGGGPGYGPGVGGGPGYGPGGVGSVPGYGSGVGGGPGYGPGGVGGGPSYGSGGV 628
Query: 104 GGLSNVITGSRSGPKASPGIEGGVSNVGAGLRYGLKAGPGVEEGVSNVGAGLRAGPKAGP 163
GG G+R GP PG+ GG G G+ G GPG G G G+ GP GP
Sbjct: 629 GGGPGYGPGARGGPGYGPGVGGG-PGYGPGVGGGPGYGPGGAGGGPGYGPGVGVGPGYGP 688
Query: 164 GPKVGVS---GSGAGPRVGPKGVNSIVN-GVEVGVGVGYRPG--FGPPGFVPPGFGPRPG 211
G G G G GP GP GV S+ G VG G GY PG G PG+ P G G PG
Sbjct: 689 GVGGGPGYGPGVGGGPGYGPGGVGSVPGYGSGVGGGPGYGPGGVGGGPGYGPGGVGGGPG 748
BLAST of HG10011672 vs. ExPASy TrEMBL
Match:
A0A6I8PB04 (Bassoon presynaptic cytomatrix protein OS=Ornithorhynchus anatinus OX=9258 GN=BSN PE=4 SV=1)
HSP 1 Score: 65.1 bits (157), Expect = 5.4e-07
Identity = 68/162 (41.98%), Postives = 72/162 (44.44%), Query Frame = 0
Query: 46 AGPGVDRGVSNVGAGPRAEPRAYLRDEGGVSNVGASPRAGPKAGLEGEGGLSNVITGSRS 105
AGP V G GPRA P A R G GA PRAGP G G G + G +
Sbjct: 352 AGPKVAGAGPGAGVGPRAGPGAGPRARPG-PGPGAGPRAGPGTG-PGAGPRAGPGPGPGA 411
Query: 106 GPKASPGIEGGVSNVGAGLRYGLKAGPGVEEGVSNVGAGLRAGPKAGPGPKVGVSGSGAG 165
GP+A PG G G G G GPG G G G RAGP GPGP+ G G G G
Sbjct: 412 GPRAGPG-PGPGPRPGPGPGPGPGTGPGPRAG---PGPGPRAGPGPGPGPRAG-PGPGPG 471
Query: 166 PRVGPKGVNSIVNGVEVGVGVGYRPGFGPPGFVPPGFGPRPG 208
PR GP G G G G PG GP PG GP G
Sbjct: 472 PRAGPGA------GPGPGTGPGPGPGPGPKAGPGPGTGPGTG 500
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN56231.1 | 2.8e-58 | 52.41 | hypothetical protein Csa_011503 [Cucumis sativus] | [more] |
| KAG6577377.1 | 1.9e-54 | 51.88 | hypothetical protein SDJN03_24951, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAA0060661.1 | 7.4e-51 | 48.60 | hypothetical protein E6C27_scaffold22G005540 [Cucumis melo var. makuwa] >TYK0221... | [more] |
| XP_022929340.1 | 2.9e-47 | 48.91 | fibroin heavy chain-like [Cucurbita moschata] | [more] |
| XP_023551823.1 | 2.8e-42 | 49.41 | fibroin heavy chain-like isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L7X7 | 1.4e-58 | 52.41 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104850 PE=4 SV=1 | [more] |
| A0A5A7V4J6 | 3.6e-51 | 48.60 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A6J1EU53 | 1.4e-47 | 48.91 | fibroin heavy chain-like OS=Cucurbita moschata OX=3662 GN=LOC111435943 PE=4 SV=1 | [more] |
| A0A7R9G286 | 7.5e-09 | 39.34 | Hypothetical protein OS=Timema shepardi OX=629360 GN=TSIB3V08_LOCUS8372 PE=4 SV=... | [more] |
| A0A6I8PB04 | 5.4e-07 | 41.98 | Bassoon presynaptic cytomatrix protein OS=Ornithorhynchus anatinus OX=9258 GN=BS... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
